BLASTX nr result
ID: Ophiopogon25_contig00008391
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon25_contig00008391
(1761 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020265242.1| mediator of RNA polymerase II transcription ... 377 e-124
ref|XP_020265240.1| mediator of RNA polymerase II transcription ... 372 e-122
gb|PKU70834.1| Mediator of RNA polymerase II transcription subun... 341 e-111
gb|OAY81971.1| Mediator of RNA polymerase II transcription subun... 342 e-111
ref|XP_010939752.1| PREDICTED: mediator of RNA polymerase II tra... 342 e-111
ref|XP_020681194.1| mediator of RNA polymerase II transcription ... 341 e-111
ref|XP_020090764.1| mediator of RNA polymerase II transcription ... 340 e-110
gb|OVA14465.1| Mediator complex [Macleaya cordata] 340 e-110
ref|XP_012455201.1| PREDICTED: mediator of RNA polymerase II tra... 337 e-109
ref|XP_008774994.1| PREDICTED: mediator of RNA polymerase II tra... 337 e-109
ref|XP_006372643.1| RNA polymerase transcriptional regulation me... 335 e-108
ref|XP_016701074.1| PREDICTED: mediator of RNA polymerase II tra... 334 e-108
ref|XP_017647247.1| PREDICTED: mediator of RNA polymerase II tra... 334 e-108
ref|XP_011046101.1| PREDICTED: mediator of RNA polymerase II tra... 333 e-108
gb|PPD74763.1| hypothetical protein GOBAR_DD28315 [Gossypium bar... 332 e-107
emb|CBI36012.3| unnamed protein product, partial [Vitis vinifera] 330 e-107
gb|PPR93780.1| hypothetical protein GOBAR_AA26897 [Gossypium bar... 332 e-107
emb|CAN68925.1| hypothetical protein VITISV_044247 [Vitis vinifera] 331 e-107
ref|XP_020588481.1| mediator of RNA polymerase II transcription ... 331 e-107
ref|XP_002282496.1| PREDICTED: mediator of RNA polymerase II tra... 331 e-107
>ref|XP_020265242.1| mediator of RNA polymerase II transcription subunit 6 isoform X2
[Asparagus officinalis]
Length = 267
Score = 377 bits (967), Expect = e-124
Identities = 192/249 (77%), Positives = 201/249 (80%), Gaps = 2/249 (0%)
Frame = -3
Query: 1606 VGNPNFXXXXXXXXXXXXXXXXXXG--ICFRDPLWLSTYPLDQNLVFDYFALSPFYDWTC 1433
VGNPNF ICFRDPLWLSTYPLD+NLVFDYFALSPFYDWTC
Sbjct: 19 VGNPNFDPSAAASAAAMPPPPGTDMTGICFRDPLWLSTYPLDRNLVFDYFALSPFYDWTC 78
Query: 1432 NNEHLRSRSIHPLDLSHLSKMTGNEYMLSEVMEPHLFVIRKQKRDSPEKVTPMLTYYVLD 1253
NNE LRSRSIHPLDLSHLSKMTGNEYMLSEVMEPHLFVIRKQKRDSPEKVTPMLTYYVLD
Sbjct: 79 NNEQLRSRSIHPLDLSHLSKMTGNEYMLSEVMEPHLFVIRKQKRDSPEKVTPMLTYYVLD 138
Query: 1252 GSIYQAPQLCNVFAARIGRAIYHISKAFTIAASKLEKIGHADTENEGANTEPKTKEPIDI 1073
GSIYQAPQLCNVFAARIGRAIYHISKAFTIAASKLEKIG+AD E+EG+NTE KTKE ID
Sbjct: 139 GSIYQAPQLCNVFAARIGRAIYHISKAFTIAASKLEKIGYADAESEGSNTEAKTKETIDF 198
Query: 1072 KELKRVDHILASLQRKLXXXXXXXXXXXXXXXXASEGEKAPEDQQNTQVQLPSVDPIIDQ 893
K+LKRVDHILASLQRKL S+GEKA EDQQ+T VQ P +DPIIDQ
Sbjct: 199 KDLKRVDHILASLQRKLPPAPPPPAFPDGYVPPTSDGEKAAEDQQSTDVQPPPLDPIIDQ 258
Query: 892 GPSKRMKFQ 866
GPSKR K+Q
Sbjct: 259 GPSKRTKYQ 267
>ref|XP_020265240.1| mediator of RNA polymerase II transcription subunit 6 isoform X1
[Asparagus officinalis]
ref|XP_020265241.1| mediator of RNA polymerase II transcription subunit 6 isoform X1
[Asparagus officinalis]
gb|ONK70032.1| uncharacterized protein A4U43_C05F29550 [Asparagus officinalis]
Length = 269
Score = 372 bits (954), Expect = e-122
Identities = 192/251 (76%), Positives = 201/251 (80%), Gaps = 4/251 (1%)
Frame = -3
Query: 1606 VGNPNFXXXXXXXXXXXXXXXXXXG--ICFRDPLWLSTYPLDQNLVFDYFALSPFYDWTC 1433
VGNPNF ICFRDPLWLSTYPLD+NLVFDYFALSPFYDWTC
Sbjct: 19 VGNPNFDPSAAASAAAMPPPPGTDMTGICFRDPLWLSTYPLDRNLVFDYFALSPFYDWTC 78
Query: 1432 NNEHLRSRSIHPLDLSHLSKMTGNEYMLSEVMEPHLFVIRKQKRDSPEKVTPMLTYYVLD 1253
NNE LRSRSIHPLDLSHLSKMTGNEYMLSEVMEPHLFVIRKQKRDSPEKVTPMLTYYVLD
Sbjct: 79 NNEQLRSRSIHPLDLSHLSKMTGNEYMLSEVMEPHLFVIRKQKRDSPEKVTPMLTYYVLD 138
Query: 1252 GSIYQAPQLCNVFAARIGRAIYHISKAFTIAASKLEKIGH--ADTENEGANTEPKTKEPI 1079
GSIYQAPQLCNVFAARIGRAIYHISKAFTIAASKLEKIG+ AD E+EG+NTE KTKE I
Sbjct: 139 GSIYQAPQLCNVFAARIGRAIYHISKAFTIAASKLEKIGYAAADAESEGSNTEAKTKETI 198
Query: 1078 DIKELKRVDHILASLQRKLXXXXXXXXXXXXXXXXASEGEKAPEDQQNTQVQLPSVDPII 899
D K+LKRVDHILASLQRKL S+GEKA EDQQ+T VQ P +DPII
Sbjct: 199 DFKDLKRVDHILASLQRKLPPAPPPPAFPDGYVPPTSDGEKAAEDQQSTDVQPPPLDPII 258
Query: 898 DQGPSKRMKFQ 866
DQGPSKR K+Q
Sbjct: 259 DQGPSKRTKYQ 269
>gb|PKU70834.1| Mediator of RNA polymerase II transcription subunit 6 [Dendrobium
catenatum]
Length = 234
Score = 341 bits (875), Expect = e-111
Identities = 172/223 (77%), Positives = 186/223 (83%), Gaps = 1/223 (0%)
Frame = -3
Query: 1531 ICFRDPLWLSTYPLDQNLVFDYFALSPFYDWTCNNEHLRSRSIHPLDLSHLSKMTGNEYM 1352
ICFRD LWL+TYPLD+NLVFDYFALSPFYDW+CNNE LRSRSIHPLD SHLSKMTGNEYM
Sbjct: 12 ICFRDQLWLNTYPLDRNLVFDYFALSPFYDWSCNNEQLRSRSIHPLDSSHLSKMTGNEYM 71
Query: 1351 LSEVMEPHLFVIRKQKRDSPEKVTPMLTYYVLDGSIYQAPQLCNVFAARIGRAIYHISKA 1172
LSEVMEPHLFVIRK KRDSPEK T MLTYY+LDGSIYQAPQL NVFAARIGR+IYH+SKA
Sbjct: 72 LSEVMEPHLFVIRKVKRDSPEKTTAMLTYYILDGSIYQAPQLSNVFAARIGRSIYHMSKA 131
Query: 1171 FTIAASKLEKIGHADTENEGANTEPK-TKEPIDIKELKRVDHILASLQRKLXXXXXXXXX 995
F+IAASKLEKIG+AD+E E ++E K KE ID KELKRVDHILASLQRKL
Sbjct: 132 FSIAASKLEKIGYADSETESTSSEAKVVKEAIDFKELKRVDHILASLQRKLPAAPAPPPF 191
Query: 994 XXXXXXXASEGEKAPEDQQNTQVQLPSVDPIIDQGPSKRMKFQ 866
ASE EK ED QN + QLP+VDPIIDQGP+KRMKFQ
Sbjct: 192 PEGYAPPASEAEKGTEDTQNPEAQLPTVDPIIDQGPAKRMKFQ 234
>gb|OAY81971.1| Mediator of RNA polymerase II transcription subunit 6 [Ananas
comosus]
Length = 259
Score = 342 bits (876), Expect = e-111
Identities = 171/224 (76%), Positives = 191/224 (85%), Gaps = 2/224 (0%)
Frame = -3
Query: 1531 ICFRDPLWLSTYPLDQNLVFDYFALSPFYDWTCNNEHLRSRSIHPLDLSHLSKMTGNEYM 1352
ICFRD LWL+TYPLD+NLVFDYFALSPFYD++CNNE LR+RSIHPLDLSHLSKMTGNEYM
Sbjct: 36 ICFRDQLWLNTYPLDRNLVFDYFALSPFYDFSCNNETLRARSIHPLDLSHLSKMTGNEYM 95
Query: 1351 LSEVMEPHLFVIRKQKRDSPEKVTPMLTYYVLDGSIYQAPQLCNVFAARIGRAIYHISKA 1172
LSEVMEPHLFVIRKQKRD PEKVTPMLTYY+LDGSIYQAPQLCNVFAARIGRA+YHISKA
Sbjct: 96 LSEVMEPHLFVIRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARIGRALYHISKA 155
Query: 1171 FTIAASKLEKIGHADTENEGANTEPK-TKEPIDIKELKRVDHILASLQRKL-XXXXXXXX 998
F IA++KLEKIGHA+ E+E A++E K TKE I+IKELKRVDHILASLQRKL
Sbjct: 156 FNIASTKLEKIGHAEAESEAASSESKTTKETINIKELKRVDHILASLQRKLPPAPAPPPF 215
Query: 997 XXXXXXXXASEGEKAPEDQQNTQVQLPSVDPIIDQGPSKRMKFQ 866
SE EK PEDQQ+ + QLP +DPIIDQGP+KR++ Q
Sbjct: 216 PEGYMPPPTSEPEKGPEDQQSLETQLPPLDPIIDQGPAKRLRIQ 259
>ref|XP_010939752.1| PREDICTED: mediator of RNA polymerase II transcription subunit 6
[Elaeis guineensis]
Length = 260
Score = 342 bits (876), Expect = e-111
Identities = 170/223 (76%), Positives = 188/223 (84%), Gaps = 2/223 (0%)
Frame = -3
Query: 1531 ICFRDPLWLSTYPLDQNLVFDYFALSPFYDWTCNNEHLRSRSIHPLDLSHLSKMTGNEYM 1352
ICFRD LWL+TYPLD+NLVFDYFALSPFYDW+CNNE LRSRSIHPLDLSHLSKMTG EY+
Sbjct: 37 ICFRDQLWLNTYPLDRNLVFDYFALSPFYDWSCNNEQLRSRSIHPLDLSHLSKMTGIEYV 96
Query: 1351 LSEVMEPHLFVIRKQKRDSPEKVTPMLTYYVLDGSIYQAPQLCNVFAARIGRAIYHISKA 1172
LSEVMEPHLFVIRKQKRD PEKV+PMLTYY+LDGSIYQAPQLCN+FAAR+GRA+YHISKA
Sbjct: 97 LSEVMEPHLFVIRKQKRDGPEKVSPMLTYYILDGSIYQAPQLCNIFAARMGRALYHISKA 156
Query: 1171 FTIAASKLEKIGHADTENEGANTEPK-TKEPIDIKELKRVDHILASLQRKL-XXXXXXXX 998
F IAASKLEKIG+A+ ENE N+E K KE IDIKELKRVDHILASLQRKL
Sbjct: 157 FNIAASKLEKIGYAEAENEDVNSESKAAKEAIDIKELKRVDHILASLQRKLPPAPAPPPF 216
Query: 997 XXXXXXXXASEGEKAPEDQQNTQVQLPSVDPIIDQGPSKRMKF 869
+SE EK PEDQQ + Q+P +DPIIDQGP+KR+KF
Sbjct: 217 PEGYLPPSSSEAEKGPEDQQTAEPQIPPMDPIIDQGPAKRIKF 259
>ref|XP_020681194.1| mediator of RNA polymerase II transcription subunit 6 isoform X1
[Dendrobium catenatum]
ref|XP_020681195.1| mediator of RNA polymerase II transcription subunit 6 isoform X2
[Dendrobium catenatum]
Length = 257
Score = 341 bits (875), Expect = e-111
Identities = 172/223 (77%), Positives = 186/223 (83%), Gaps = 1/223 (0%)
Frame = -3
Query: 1531 ICFRDPLWLSTYPLDQNLVFDYFALSPFYDWTCNNEHLRSRSIHPLDLSHLSKMTGNEYM 1352
ICFRD LWL+TYPLD+NLVFDYFALSPFYDW+CNNE LRSRSIHPLD SHLSKMTGNEYM
Sbjct: 35 ICFRDQLWLNTYPLDRNLVFDYFALSPFYDWSCNNEQLRSRSIHPLDSSHLSKMTGNEYM 94
Query: 1351 LSEVMEPHLFVIRKQKRDSPEKVTPMLTYYVLDGSIYQAPQLCNVFAARIGRAIYHISKA 1172
LSEVMEPHLFVIRK KRDSPEK T MLTYY+LDGSIYQAPQL NVFAARIGR+IYH+SKA
Sbjct: 95 LSEVMEPHLFVIRKVKRDSPEKTTAMLTYYILDGSIYQAPQLSNVFAARIGRSIYHMSKA 154
Query: 1171 FTIAASKLEKIGHADTENEGANTEPK-TKEPIDIKELKRVDHILASLQRKLXXXXXXXXX 995
F+IAASKLEKIG+AD+E E ++E K KE ID KELKRVDHILASLQRKL
Sbjct: 155 FSIAASKLEKIGYADSETESTSSEAKVVKEAIDFKELKRVDHILASLQRKLPAAPAPPPF 214
Query: 994 XXXXXXXASEGEKAPEDQQNTQVQLPSVDPIIDQGPSKRMKFQ 866
ASE EK ED QN + QLP+VDPIIDQGP+KRMKFQ
Sbjct: 215 PEGYAPPASEAEKGTEDTQNPEAQLPTVDPIIDQGPAKRMKFQ 257
>ref|XP_020090764.1| mediator of RNA polymerase II transcription subunit 6 [Ananas
comosus]
ref|XP_020090765.1| mediator of RNA polymerase II transcription subunit 6 [Ananas
comosus]
ref|XP_020090766.1| mediator of RNA polymerase II transcription subunit 6 [Ananas
comosus]
Length = 259
Score = 340 bits (873), Expect = e-110
Identities = 170/224 (75%), Positives = 191/224 (85%), Gaps = 2/224 (0%)
Frame = -3
Query: 1531 ICFRDPLWLSTYPLDQNLVFDYFALSPFYDWTCNNEHLRSRSIHPLDLSHLSKMTGNEYM 1352
ICFRD LWL+TYPLD+NLVFDYFALSPFYD++CNNE LR+RSIHPLDLSHLSKMTGNEYM
Sbjct: 36 ICFRDQLWLNTYPLDRNLVFDYFALSPFYDFSCNNETLRARSIHPLDLSHLSKMTGNEYM 95
Query: 1351 LSEVMEPHLFVIRKQKRDSPEKVTPMLTYYVLDGSIYQAPQLCNVFAARIGRAIYHISKA 1172
LSEVMEPHLFVIRKQKRD PEKVTPMLTYY+LDGSIYQ+PQLCNVFAARIGRA+YHISKA
Sbjct: 96 LSEVMEPHLFVIRKQKRDGPEKVTPMLTYYILDGSIYQSPQLCNVFAARIGRALYHISKA 155
Query: 1171 FTIAASKLEKIGHADTENEGANTEPK-TKEPIDIKELKRVDHILASLQRKL-XXXXXXXX 998
F IA++KLEKIGHA+ E+E A++E K TKE I+IKELKRVDHILASLQRKL
Sbjct: 156 FNIASTKLEKIGHAEAESEAASSESKTTKETINIKELKRVDHILASLQRKLPPAPAPPPF 215
Query: 997 XXXXXXXXASEGEKAPEDQQNTQVQLPSVDPIIDQGPSKRMKFQ 866
SE EK PEDQQ+ + QLP +DPIIDQGP+KR++ Q
Sbjct: 216 PEGYMPPPTSEPEKGPEDQQSLETQLPPLDPIIDQGPAKRLRIQ 259
>gb|OVA14465.1| Mediator complex [Macleaya cordata]
Length = 256
Score = 340 bits (872), Expect = e-110
Identities = 169/222 (76%), Positives = 181/222 (81%), Gaps = 1/222 (0%)
Frame = -3
Query: 1531 ICFRDPLWLSTYPLDQNLVFDYFALSPFYDWTCNNEHLRSRSIHPLDLSHLSKMTGNEYM 1352
ICFRD LWL++YPLD+NLVFDYFALSPFYDWTCNNE LR +SIHPLD+SHLSKMTG EYM
Sbjct: 35 ICFRDQLWLNSYPLDRNLVFDYFALSPFYDWTCNNEQLRMQSIHPLDISHLSKMTGTEYM 94
Query: 1351 LSEVMEPHLFVIRKQKRDSPEKVTPMLTYYVLDGSIYQAPQLCNVFAARIGRAIYHISKA 1172
L+EVMEPHLFV RKQKRD PEKVTPMLTYYVLDGSIYQAPQLCNVFAARIGRA+YHISKA
Sbjct: 95 LNEVMEPHLFVFRKQKRDGPEKVTPMLTYYVLDGSIYQAPQLCNVFAARIGRALYHISKA 154
Query: 1171 FTIAASKLEKIGHADTENEGANTEPK-TKEPIDIKELKRVDHILASLQRKLXXXXXXXXX 995
FT A SKLEKIG+ D ENE EPK KE ID KELKRVDHILASLQRKL
Sbjct: 155 FTTAESKLEKIGYVDGENESTGLEPKVAKETIDFKELKRVDHILASLQRKLQPAPPPPPF 214
Query: 994 XXXXXXXASEGEKAPEDQQNTQVQLPSVDPIIDQGPSKRMKF 869
SE +K E+QQ T+ QLP +DPIIDQGPSKRMKF
Sbjct: 215 PEGYVPPTSEADKGTENQQATEPQLPPLDPIIDQGPSKRMKF 256
>ref|XP_012455201.1| PREDICTED: mediator of RNA polymerase II transcription subunit 6
[Gossypium raimondii]
gb|KJB70362.1| hypothetical protein B456_011G069400 [Gossypium raimondii]
gb|KJB70364.1| hypothetical protein B456_011G069400 [Gossypium raimondii]
Length = 232
Score = 337 bits (864), Expect = e-109
Identities = 166/222 (74%), Positives = 184/222 (82%), Gaps = 1/222 (0%)
Frame = -3
Query: 1531 ICFRDPLWLSTYPLDQNLVFDYFALSPFYDWTCNNEHLRSRSIHPLDLSHLSKMTGNEYM 1352
ICFRD LWL+TYPLD+NL+FDYFALSPFYDWTCNNE LR +SIHPLD+S LSKMTG EYM
Sbjct: 11 ICFRDQLWLNTYPLDRNLIFDYFALSPFYDWTCNNEKLRMQSIHPLDISQLSKMTGIEYM 70
Query: 1351 LSEVMEPHLFVIRKQKRDSPEKVTPMLTYYVLDGSIYQAPQLCNVFAARIGRAIYHISKA 1172
LSEVMEPHLF+IRKQKRDS EKVTPML YY+LDGSIYQAPQLCNVFAAR+GRA+Y+ISKA
Sbjct: 71 LSEVMEPHLFIIRKQKRDSAEKVTPMLAYYILDGSIYQAPQLCNVFAARVGRALYYISKA 130
Query: 1171 FTIAASKLEKIGHADTENEGANTEPK-TKEPIDIKELKRVDHILASLQRKLXXXXXXXXX 995
FT AASKLEKIG+ DTENE +EPK KE ID KE+KRVDHILASLQRKL
Sbjct: 131 FTTAASKLEKIGYGDTENESETSEPKGGKETIDFKEVKRVDHILASLQRKLPPAPPPPPF 190
Query: 994 XXXXXXXASEGEKAPEDQQNTQVQLPSVDPIIDQGPSKRMKF 869
+E EK PE+QQ T+ Q P+VDPIIDQGP+KRMKF
Sbjct: 191 PDGFVPPTTEAEKEPENQQTTEPQPPAVDPIIDQGPAKRMKF 232
>ref|XP_008774994.1| PREDICTED: mediator of RNA polymerase II transcription subunit 6
[Phoenix dactylifera]
Length = 260
Score = 337 bits (864), Expect = e-109
Identities = 168/224 (75%), Positives = 186/224 (83%), Gaps = 2/224 (0%)
Frame = -3
Query: 1531 ICFRDPLWLSTYPLDQNLVFDYFALSPFYDWTCNNEHLRSRSIHPLDLSHLSKMTGNEYM 1352
ICFRD LWL+TYPLD++LVFDYFALSPFYDW+CNNE LRSRSIHPLDLSHLSKMTG EY+
Sbjct: 37 ICFRDQLWLNTYPLDRSLVFDYFALSPFYDWSCNNEQLRSRSIHPLDLSHLSKMTGIEYV 96
Query: 1351 LSEVMEPHLFVIRKQKRDSPEKVTPMLTYYVLDGSIYQAPQLCNVFAARIGRAIYHISKA 1172
LSEVMEPHLFVIRKQKRD PEKV PMLTYY+LDGSIYQAPQLCN+FAAR+GRA+YHISKA
Sbjct: 97 LSEVMEPHLFVIRKQKRDGPEKVNPMLTYYILDGSIYQAPQLCNIFAARMGRALYHISKA 156
Query: 1171 FTIAASKLEKIGHADTENEGANTEPK-TKEPIDIKELKRVDHILASLQRKL-XXXXXXXX 998
F A+SKLEKIG+A+ ENE N+E K KE IDIKELKRVDHILASLQRKL
Sbjct: 157 FNTASSKLEKIGYAEAENEDTNSESKAAKEAIDIKELKRVDHILASLQRKLPPAPPPPPF 216
Query: 997 XXXXXXXXASEGEKAPEDQQNTQVQLPSVDPIIDQGPSKRMKFQ 866
+SE EK PEDQQ Q+P +DPIIDQGP+KR+KFQ
Sbjct: 217 PEGYAPPSSSEAEKGPEDQQTADPQVPPMDPIIDQGPAKRIKFQ 260
>ref|XP_006372643.1| RNA polymerase transcriptional regulation mediator-related family
protein [Populus trichocarpa]
gb|PNS97024.1| hypothetical protein POPTR_017G154400v3 [Populus trichocarpa]
Length = 259
Score = 335 bits (859), Expect = e-108
Identities = 170/223 (76%), Positives = 185/223 (82%), Gaps = 2/223 (0%)
Frame = -3
Query: 1531 ICFRDPLWLSTYPLDQNLVFDYFALSPFYDWTCNNEHLRSRSIHPLDLSHLSKMTGNEYM 1352
ICFRD LWL+TYPLD+NLVFDYFALSPFYDWTCNNE LRS+SIHPLDLSHL KMTG EYM
Sbjct: 37 ICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRSQSIHPLDLSHLLKMTGTEYM 96
Query: 1351 LSEVMEPHLFVIRKQKRDSPEKVTPMLTYYVLDGSIYQAPQLCNVFAARIGRAIYHISKA 1172
LSEVMEPHLFV RKQKRDS EKVTPMLTYYVLDGSIYQAPQLC+VFAAR+GRA+Y+ISKA
Sbjct: 97 LSEVMEPHLFVFRKQKRDSAEKVTPMLTYYVLDGSIYQAPQLCSVFAARVGRALYYISKA 156
Query: 1171 FTIAASKLEKIGHADTENEGANTEPKT-KEPIDIKELKRVDHILASLQRKL-XXXXXXXX 998
F AASKLEKIG+ D+ENEGA +E KT KE ID KE+KR+DHILASLQRKL
Sbjct: 157 FGTAASKLEKIGYVDSENEGAASESKTGKEVIDFKEVKRIDHILASLQRKLPPAPPPPSF 216
Query: 997 XXXXXXXXASEGEKAPEDQQNTQVQLPSVDPIIDQGPSKRMKF 869
+E EK PE QQ + QLPSVDPIIDQGP+KRMKF
Sbjct: 217 PEGYVPQPTTEEEKGPETQQGGEPQLPSVDPIIDQGPAKRMKF 259
>ref|XP_016701074.1| PREDICTED: mediator of RNA polymerase II transcription subunit 6-like
[Gossypium hirsutum]
Length = 256
Score = 334 bits (856), Expect = e-108
Identities = 165/222 (74%), Positives = 183/222 (82%), Gaps = 1/222 (0%)
Frame = -3
Query: 1531 ICFRDPLWLSTYPLDQNLVFDYFALSPFYDWTCNNEHLRSRSIHPLDLSHLSKMTGNEYM 1352
ICFRD LWL+TYPLD+NL+FDYFALSPFYDWTCNNE LR +SIHPLD+S LSKMTG EYM
Sbjct: 35 ICFRDQLWLNTYPLDRNLIFDYFALSPFYDWTCNNEKLRMQSIHPLDISQLSKMTGIEYM 94
Query: 1351 LSEVMEPHLFVIRKQKRDSPEKVTPMLTYYVLDGSIYQAPQLCNVFAARIGRAIYHISKA 1172
LSEVMEPHLF+I KQKRDS EKVTPML YY+LDGSIYQAPQLCNVFAAR+GRA+Y+ISKA
Sbjct: 95 LSEVMEPHLFIICKQKRDSAEKVTPMLAYYILDGSIYQAPQLCNVFAARVGRALYYISKA 154
Query: 1171 FTIAASKLEKIGHADTENEGANTEPK-TKEPIDIKELKRVDHILASLQRKLXXXXXXXXX 995
FT AASKLEKIG+ DTENE +EPK KE ID KE+KRVDHILASLQRKL
Sbjct: 155 FTTAASKLEKIGYVDTENESETSEPKGGKETIDFKEVKRVDHILASLQRKLPPAPPPPPF 214
Query: 994 XXXXXXXASEGEKAPEDQQNTQVQLPSVDPIIDQGPSKRMKF 869
+E EK PE+QQ T+ Q P+VDPIIDQGP+KRMKF
Sbjct: 215 PDGFVPPTTEAEKEPENQQTTEPQPPAVDPIIDQGPAKRMKF 256
>ref|XP_017647247.1| PREDICTED: mediator of RNA polymerase II transcription subunit 6
[Gossypium arboreum]
gb|KHF98794.1| Putative mediator of RNA polymerase II transcription subunit 6
[Gossypium arboreum]
Length = 256
Score = 334 bits (856), Expect = e-108
Identities = 164/222 (73%), Positives = 183/222 (82%), Gaps = 1/222 (0%)
Frame = -3
Query: 1531 ICFRDPLWLSTYPLDQNLVFDYFALSPFYDWTCNNEHLRSRSIHPLDLSHLSKMTGNEYM 1352
ICFRD LWL+TYPLD+NL+FDYFALSPFYDWTCNNE LR +SIHPLD+S LSKMTG EYM
Sbjct: 35 ICFRDQLWLNTYPLDRNLIFDYFALSPFYDWTCNNEKLRMQSIHPLDISQLSKMTGIEYM 94
Query: 1351 LSEVMEPHLFVIRKQKRDSPEKVTPMLTYYVLDGSIYQAPQLCNVFAARIGRAIYHISKA 1172
LSEVMEPHLF+IRKQKRDS EKVTPML YY+LDGSIYQAPQLCNVFAAR+GRA+Y+ISKA
Sbjct: 95 LSEVMEPHLFIIRKQKRDSAEKVTPMLAYYILDGSIYQAPQLCNVFAARVGRALYYISKA 154
Query: 1171 FTIAASKLEKIGHADTENEGANTEPK-TKEPIDIKELKRVDHILASLQRKLXXXXXXXXX 995
FT AASKLEKIG+ DTENE +EPK KE ID KE+KRVDHILASLQRKL
Sbjct: 155 FTTAASKLEKIGYVDTENESETSEPKGGKEAIDFKEVKRVDHILASLQRKLPPAPPPPPF 214
Query: 994 XXXXXXXASEGEKAPEDQQNTQVQLPSVDPIIDQGPSKRMKF 869
+E +K PE+QQ + Q P+VDPIIDQGP+KRMKF
Sbjct: 215 PDGFVPPTTEADKEPENQQTAEPQPPAVDPIIDQGPAKRMKF 256
>ref|XP_011046101.1| PREDICTED: mediator of RNA polymerase II transcription subunit 6
[Populus euphratica]
ref|XP_011046103.1| PREDICTED: mediator of RNA polymerase II transcription subunit 6
[Populus euphratica]
Length = 259
Score = 333 bits (854), Expect = e-108
Identities = 169/223 (75%), Positives = 184/223 (82%), Gaps = 2/223 (0%)
Frame = -3
Query: 1531 ICFRDPLWLSTYPLDQNLVFDYFALSPFYDWTCNNEHLRSRSIHPLDLSHLSKMTGNEYM 1352
ICFRD LWL+TYPLD+NLVFDYFALSPFYDWTCNNE LRS+SIHPLDLSHL KMTG EYM
Sbjct: 37 ICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRSQSIHPLDLSHLLKMTGTEYM 96
Query: 1351 LSEVMEPHLFVIRKQKRDSPEKVTPMLTYYVLDGSIYQAPQLCNVFAARIGRAIYHISKA 1172
LSEVMEPHLFV RKQKRDS EKVTPMLTYYVLDGSIYQAPQLC+VFAAR+GRA+Y+ISKA
Sbjct: 97 LSEVMEPHLFVFRKQKRDSAEKVTPMLTYYVLDGSIYQAPQLCSVFAARVGRALYYISKA 156
Query: 1171 FTIAASKLEKIGHADTENEGANTEPKT-KEPIDIKELKRVDHILASLQRKL-XXXXXXXX 998
F AASKLEKIG+ D+ENEGA +E KT KE ID KE+KR+DHILASLQRKL
Sbjct: 157 FGTAASKLEKIGYVDSENEGAASESKTGKEVIDFKEVKRIDHILASLQRKLPPAPPPPSF 216
Query: 997 XXXXXXXXASEGEKAPEDQQNTQVQLPSVDPIIDQGPSKRMKF 869
+E EK PE QQ + QLP VDPIIDQGP+KRMKF
Sbjct: 217 PEGYVPQSTTEEEKGPETQQGGEPQLPPVDPIIDQGPAKRMKF 259
>gb|PPD74763.1| hypothetical protein GOBAR_DD28315 [Gossypium barbadense]
Length = 256
Score = 332 bits (852), Expect = e-107
Identities = 164/222 (73%), Positives = 182/222 (81%), Gaps = 1/222 (0%)
Frame = -3
Query: 1531 ICFRDPLWLSTYPLDQNLVFDYFALSPFYDWTCNNEHLRSRSIHPLDLSHLSKMTGNEYM 1352
ICFRD LWL+TYPLD+NL+FDYFALSPFY WTCNNE LR +SIHPLD+S LSKMTG EYM
Sbjct: 35 ICFRDQLWLNTYPLDRNLIFDYFALSPFYGWTCNNEKLRMQSIHPLDISQLSKMTGIEYM 94
Query: 1351 LSEVMEPHLFVIRKQKRDSPEKVTPMLTYYVLDGSIYQAPQLCNVFAARIGRAIYHISKA 1172
LSEVMEPHLF+IRKQKRDS EKVTPML YY+LDGSIYQAPQLCNVFAAR+GRA+Y+ISKA
Sbjct: 95 LSEVMEPHLFIIRKQKRDSAEKVTPMLAYYILDGSIYQAPQLCNVFAARVGRALYYISKA 154
Query: 1171 FTIAASKLEKIGHADTENEGANTEPK-TKEPIDIKELKRVDHILASLQRKLXXXXXXXXX 995
FT AASKLEKIG+ DTENE +EPK KE ID KE+KRVDHILASLQRKL
Sbjct: 155 FTTAASKLEKIGYVDTENESETSEPKGGKETIDFKEVKRVDHILASLQRKLPPAPPPPPF 214
Query: 994 XXXXXXXASEGEKAPEDQQNTQVQLPSVDPIIDQGPSKRMKF 869
+E EK PE+QQ + Q P+VDPIIDQGP+KRMKF
Sbjct: 215 PDGFVPPTTEAEKEPENQQTAEPQPPAVDPIIDQGPAKRMKF 256
>emb|CBI36012.3| unnamed protein product, partial [Vitis vinifera]
Length = 226
Score = 330 bits (847), Expect = e-107
Identities = 167/223 (74%), Positives = 179/223 (80%), Gaps = 2/223 (0%)
Frame = -3
Query: 1531 ICFRDPLWLSTYPLDQNLVFDYFALSPFYDWTCNNEHLRSRSIHPLDLSHLSKMTGNEYM 1352
ICFRD LWL++YPLD+NLVFDYFALSPFYDWTCNNE LR RSIHPLD SHLSKMTG EYM
Sbjct: 4 ICFRDQLWLNSYPLDRNLVFDYFALSPFYDWTCNNEQLRLRSIHPLDTSHLSKMTGTEYM 63
Query: 1351 LSEVMEPHLFVIRKQKRDSPEKVTPMLTYYVLDGSIYQAPQLCNVFAARIGRAIYHISKA 1172
L+EVMEPHLFVIRKQKRD PEKVTPMLTYY+LDGSIYQAPQLCNVF ARIGRA+YHISKA
Sbjct: 64 LNEVMEPHLFVIRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFTARIGRALYHISKA 123
Query: 1171 FTIAASKLEKIGHADTENEGANTEPKT-KEPIDIKELKRVDHILASLQRKL-XXXXXXXX 998
FT AASKLEKIG+ D ENE E K KE ID KE+ RVD ILASLQRKL
Sbjct: 124 FTTAASKLEKIGYVDAENENPALESKVGKETIDFKEVMRVDQILASLQRKLPPAPPPPQF 183
Query: 997 XXXXXXXXASEGEKAPEDQQNTQVQLPSVDPIIDQGPSKRMKF 869
+EGEK PE QQ + QLP++DPIIDQGPSKRMKF
Sbjct: 184 PEGYAPPPTAEGEKGPETQQAAEPQLPALDPIIDQGPSKRMKF 226
>gb|PPR93780.1| hypothetical protein GOBAR_AA26897 [Gossypium barbadense]
Length = 256
Score = 332 bits (850), Expect = e-107
Identities = 163/222 (73%), Positives = 183/222 (82%), Gaps = 1/222 (0%)
Frame = -3
Query: 1531 ICFRDPLWLSTYPLDQNLVFDYFALSPFYDWTCNNEHLRSRSIHPLDLSHLSKMTGNEYM 1352
ICFRD LWL+TYPLD+NL+FDYFALSPFYDWTCNNE LR +SIHPLD+S LSKMTG EYM
Sbjct: 35 ICFRDQLWLNTYPLDRNLIFDYFALSPFYDWTCNNEKLRMQSIHPLDISQLSKMTGIEYM 94
Query: 1351 LSEVMEPHLFVIRKQKRDSPEKVTPMLTYYVLDGSIYQAPQLCNVFAARIGRAIYHISKA 1172
LSEVMEPHLF+IRKQKRDS EKVTP+L YY+LDGSIYQAPQLCNVFAAR+GRA+Y+ISKA
Sbjct: 95 LSEVMEPHLFIIRKQKRDSAEKVTPILAYYILDGSIYQAPQLCNVFAARVGRALYYISKA 154
Query: 1171 FTIAASKLEKIGHADTENEGANTEPK-TKEPIDIKELKRVDHILASLQRKLXXXXXXXXX 995
FT AASKLEKIG+ DTENE +EPK KE ID KE+KRVDHILASLQRKL
Sbjct: 155 FTTAASKLEKIGYVDTENESEASEPKGGKEAIDFKEVKRVDHILASLQRKLPPAPPPPPF 214
Query: 994 XXXXXXXASEGEKAPEDQQNTQVQLPSVDPIIDQGPSKRMKF 869
+E +K PE+QQ + Q P+VDPIIDQGP+KRMKF
Sbjct: 215 PDGFVPPTTEADKEPENQQTAEPQPPAVDPIIDQGPAKRMKF 256
>emb|CAN68925.1| hypothetical protein VITISV_044247 [Vitis vinifera]
Length = 253
Score = 331 bits (848), Expect = e-107
Identities = 172/247 (69%), Positives = 184/247 (74%), Gaps = 2/247 (0%)
Frame = -3
Query: 1603 GNPNFXXXXXXXXXXXXXXXXXXGICFRDPLWLSTYPLDQNLVFDYFALSPFYDWTCNNE 1424
GNPNF ICFRD LWL++YPLD+NLVFDYFALSPFYDWTCNNE
Sbjct: 9 GNPNFDGNPPAAPTPPGTDMTG--ICFRDQLWLNSYPLDRNLVFDYFALSPFYDWTCNNE 66
Query: 1423 HLRSRSIHPLDLSHLSKMTGNEYMLSEVMEPHLFVIRKQKRDSPEKVTPMLTYYVLDGSI 1244
LR RSIHPLD SHLSKMTG EYML+EVMEPHLFVIRKQKRD PEKVTPMLTYY+LDGSI
Sbjct: 67 QLRLRSIHPLDTSHLSKMTGTEYMLNEVMEPHLFVIRKQKRDGPEKVTPMLTYYILDGSI 126
Query: 1243 YQAPQLCNVFAARIGRAIYHISKAFTIAASKLEKIGHADTENEGANTEPKT-KEPIDIKE 1067
YQAPQLCNVF ARIGRA+YHISKAFT AASKLEKIG+ D ENE E K KE ID KE
Sbjct: 127 YQAPQLCNVFTARIGRALYHISKAFTTAASKLEKIGYVDAENENPALESKVGKETIDFKE 186
Query: 1066 LKRVDHILASLQRKL-XXXXXXXXXXXXXXXXASEGEKAPEDQQNTQVQLPSVDPIIDQG 890
+ RVD ILASLQRKL +EGEK PE QQ + QLP++DPIIDQG
Sbjct: 187 VMRVDQILASLQRKLPPAPPAPQFPEGYAPPPTAEGEKGPETQQAAEPQLPALDPIIDQG 246
Query: 889 PSKRMKF 869
PSKRMKF
Sbjct: 247 PSKRMKF 253
>ref|XP_020588481.1| mediator of RNA polymerase II transcription subunit 6 [Phalaenopsis
equestris]
Length = 257
Score = 331 bits (848), Expect = e-107
Identities = 166/223 (74%), Positives = 182/223 (81%), Gaps = 1/223 (0%)
Frame = -3
Query: 1531 ICFRDPLWLSTYPLDQNLVFDYFALSPFYDWTCNNEHLRSRSIHPLDLSHLSKMTGNEYM 1352
ICFRD LWL+T+PLD+NLVFDYFALSPFYDWTCNNE LRSRSIHPLD S LSKMTGNEYM
Sbjct: 35 ICFRDQLWLNTFPLDRNLVFDYFALSPFYDWTCNNEQLRSRSIHPLDSSQLSKMTGNEYM 94
Query: 1351 LSEVMEPHLFVIRKQKRDSPEKVTPMLTYYVLDGSIYQAPQLCNVFAARIGRAIYHISKA 1172
LSEVMEPHLFVIRK KR+SP+K MLTYY+LDGSIYQAPQLCNVFAARIG++IYH+SKA
Sbjct: 95 LSEVMEPHLFVIRKVKRESPDKTMAMLTYYILDGSIYQAPQLCNVFAARIGKSIYHLSKA 154
Query: 1171 FTIAASKLEKIGHADTENEGANTEPK-TKEPIDIKELKRVDHILASLQRKLXXXXXXXXX 995
F +AASKLEKIG+ D+E EG ++E K KE IDIKELKRVDHILASLQRKL
Sbjct: 155 FNMAASKLEKIGYVDSEAEGTSSETKVVKEAIDIKELKRVDHILASLQRKLPPAPAPPPF 214
Query: 994 XXXXXXXASEGEKAPEDQQNTQVQLPSVDPIIDQGPSKRMKFQ 866
A E EDQQN + QLP VDPIIDQGP+KRMKFQ
Sbjct: 215 PEGYAPPAFEAVNGSEDQQNLEAQLPPVDPIIDQGPAKRMKFQ 257
>ref|XP_002282496.1| PREDICTED: mediator of RNA polymerase II transcription subunit 6
[Vitis vinifera]
Length = 258
Score = 331 bits (848), Expect = e-107
Identities = 172/247 (69%), Positives = 184/247 (74%), Gaps = 2/247 (0%)
Frame = -3
Query: 1603 GNPNFXXXXXXXXXXXXXXXXXXGICFRDPLWLSTYPLDQNLVFDYFALSPFYDWTCNNE 1424
GNPNF ICFRD LWL++YPLD+NLVFDYFALSPFYDWTCNNE
Sbjct: 14 GNPNFDGNPPAVPTPPGTDMTG--ICFRDQLWLNSYPLDRNLVFDYFALSPFYDWTCNNE 71
Query: 1423 HLRSRSIHPLDLSHLSKMTGNEYMLSEVMEPHLFVIRKQKRDSPEKVTPMLTYYVLDGSI 1244
LR RSIHPLD SHLSKMTG EYML+EVMEPHLFVIRKQKRD PEKVTPMLTYY+LDGSI
Sbjct: 72 QLRLRSIHPLDTSHLSKMTGTEYMLNEVMEPHLFVIRKQKRDGPEKVTPMLTYYILDGSI 131
Query: 1243 YQAPQLCNVFAARIGRAIYHISKAFTIAASKLEKIGHADTENEGANTEPKT-KEPIDIKE 1067
YQAPQLCNVF ARIGRA+YHISKAFT AASKLEKIG+ D ENE E K KE ID KE
Sbjct: 132 YQAPQLCNVFTARIGRALYHISKAFTTAASKLEKIGYVDAENENPALESKVGKETIDFKE 191
Query: 1066 LKRVDHILASLQRKL-XXXXXXXXXXXXXXXXASEGEKAPEDQQNTQVQLPSVDPIIDQG 890
+ RVD ILASLQRKL +EGEK PE QQ + QLP++DPIIDQG
Sbjct: 192 VMRVDQILASLQRKLPPAPPPPQFPEGYAPPPTAEGEKGPETQQAAEPQLPALDPIIDQG 251
Query: 889 PSKRMKF 869
PSKRMKF
Sbjct: 252 PSKRMKF 258