BLASTX nr result
ID: Ophiopogon25_contig00008306
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon25_contig00008306
(620 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010931403.2| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 72 6e-11
ref|XP_020260062.1| pentatricopeptide repeat-containing protein ... 67 2e-09
ref|XP_011622844.2| pentatricopeptide repeat-containing protein ... 61 3e-07
ref|XP_009409574.1| PREDICTED: pentatricopeptide repeat-containi... 59 9e-07
ref|XP_020114321.1| pentatricopeptide repeat-containing protein ... 58 2e-06
gb|OAY67278.1| Pentatricopeptide repeat-containing protein [Anan... 58 2e-06
gb|AEW07759.1| hypothetical protein 0_10928_02, partial [Pinus r... 53 3e-06
gb|PKA51155.1| Pentatricopeptide repeat-containing protein [Apos... 57 4e-06
ref|XP_020580751.1| pentatricopeptide repeat-containing protein ... 57 6e-06
gb|ESR58549.1| hypothetical protein CICLE_v10024593mg [Citrus cl... 57 8e-06
>ref|XP_010931403.2| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g14730 [Elaeis guineensis]
Length = 635
Score = 71.6 bits (174), Expect = 6e-11
Identities = 30/49 (61%), Positives = 39/49 (79%)
Frame = +2
Query: 8 CSWVEVVGLGLHTFITGDQNHPEAKGIYGMLHGLVRQMRELGSVPNVFM 154
CSWVEV G G+H F+TGD++HPEA+GIYG LHGL+ +MRE V +V +
Sbjct: 583 CSWVEVAGKGVHAFLTGDRDHPEAEGIYGALHGLIGRMRENRDVSDVML 631
>ref|XP_020260062.1| pentatricopeptide repeat-containing protein At3g14730-like
[Asparagus officinalis]
ref|XP_020260063.1| pentatricopeptide repeat-containing protein At3g14730-like
[Asparagus officinalis]
gb|ONK71012.1| uncharacterized protein A4U43_C04F3810 [Asparagus officinalis]
Length = 627
Score = 67.4 bits (163), Expect = 2e-09
Identities = 33/60 (55%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Frame = +2
Query: 8 CSWVEVVGLGLHTFITGDQNHPEAKGIYGMLHGLVRQMRELGSV-PNVFMQETDEQEEEA 184
CSWVEV GLGL+TF+TG +HP + G+LHGLVRQMRE G + ++ Q D+ EEA
Sbjct: 556 CSWVEVSGLGLNTFVTGVLDHPRGIEVCGVLHGLVRQMREFGCLYHDILTQGIDQDVEEA 615
>ref|XP_011622844.2| pentatricopeptide repeat-containing protein At1g08070,
chloroplastic-like [Amborella trichopoda]
Length = 453
Score = 60.8 bits (146), Expect = 3e-07
Identities = 29/71 (40%), Positives = 48/71 (67%), Gaps = 3/71 (4%)
Frame = +2
Query: 8 CSWVEVVGLGLHTFITGDQNHPEAKGIYGMLHGLVRQMRELGSVPN---VFMQETDEQEE 178
CSW+E+ G+H F+ GDQ HP+++ IY ML +++QMR G +PN V++ +E++E
Sbjct: 321 CSWIELKD-GIHEFLQGDQRHPQSRAIYEMLEDMMKQMRLRGYIPNTSDVWLNIHEEEKE 379
Query: 179 EALGIA*CERI 211
AL + CE++
Sbjct: 380 TALSVH-CEKL 389
>ref|XP_009409574.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14730
[Musa acuminata subsp. malaccensis]
Length = 624
Score = 59.3 bits (142), Expect = 9e-07
Identities = 29/48 (60%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Frame = +2
Query: 8 CSWVEVVGLGLHTFITGDQNHPEAKGIYGMLHGLVRQMREL-GSVPNV 148
CSWVEV G +H F+ GDQ HPEA IY LHGL+ MRE G VP V
Sbjct: 571 CSWVEVGGARMHAFVAGDQEHPEAAEIYTALHGLMGWMREAWGYVPEV 618
>ref|XP_020114321.1| pentatricopeptide repeat-containing protein At3g14730-like, partial
[Ananas comosus]
Length = 605
Score = 58.2 bits (139), Expect = 2e-06
Identities = 30/60 (50%), Positives = 39/60 (65%), Gaps = 13/60 (21%)
Frame = +2
Query: 8 CSWVEV--VGLGL-----------HTFITGDQNHPEAKGIYGMLHGLVRQMRELGSVPNV 148
CSWVEV VG+G+ H F++GD+ HPE + IY MLHGLV +MRE G VP++
Sbjct: 544 CSWVEVGAVGVGVDGAAAGEGRTVHVFVSGDREHPEMERIYQMLHGLVGRMRECGYVPDL 603
>gb|OAY67278.1| Pentatricopeptide repeat-containing protein [Ananas comosus]
Length = 634
Score = 58.2 bits (139), Expect = 2e-06
Identities = 30/60 (50%), Positives = 39/60 (65%), Gaps = 13/60 (21%)
Frame = +2
Query: 8 CSWVEV--VGLGL-----------HTFITGDQNHPEAKGIYGMLHGLVRQMRELGSVPNV 148
CSWVEV VG+G+ H F++GD+ HPE + IY MLHGLV +MRE G VP++
Sbjct: 573 CSWVEVGAVGVGVDGAAAGEGRTVHVFVSGDREHPEMERIYQMLHGLVGRMRECGYVPDL 632
>gb|AEW07759.1| hypothetical protein 0_10928_02, partial [Pinus radiata]
gb|AFG65694.1| hypothetical protein 0_10928_02, partial [Pinus taeda]
gb|AFG65695.1| hypothetical protein 0_10928_02, partial [Pinus taeda]
gb|AFG65696.1| hypothetical protein 0_10928_02, partial [Pinus taeda]
gb|AFG65697.1| hypothetical protein 0_10928_02, partial [Pinus taeda]
gb|AFG65698.1| hypothetical protein 0_10928_02, partial [Pinus taeda]
gb|AFG65699.1| hypothetical protein 0_10928_02, partial [Pinus taeda]
gb|AFG65701.1| hypothetical protein 0_10928_02, partial [Pinus taeda]
gb|AFG65702.1| hypothetical protein 0_10928_02, partial [Pinus taeda]
gb|AFG65704.1| hypothetical protein 0_10928_02, partial [Pinus taeda]
gb|AFG65705.1| hypothetical protein 0_10928_02, partial [Pinus taeda]
gb|AFG65706.1| hypothetical protein 0_10928_02, partial [Pinus taeda]
gb|AFG65707.1| hypothetical protein 0_10928_02, partial [Pinus taeda]
gb|AFG65708.1| hypothetical protein 0_10928_02, partial [Pinus taeda]
gb|AFG65709.1| hypothetical protein 0_10928_02, partial [Pinus taeda]
Length = 61
Score = 53.1 bits (126), Expect = 3e-06
Identities = 25/55 (45%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
Frame = +2
Query: 8 CSWVEVVGLGLHTFITGDQNHPEAKGIYGMLHGLVRQMRELGSVPNV--FMQETD 166
CSW+EV +H F+ GD++HP+ + IY L L+ QMRE G VPN +Q+T+
Sbjct: 8 CSWIEVRNK-VHVFVVGDRSHPQTEAIYQKLDELISQMREAGYVPNTKFVLQDTE 61
>gb|PKA51155.1| Pentatricopeptide repeat-containing protein [Apostasia shenzhenica]
Length = 610
Score = 57.4 bits (137), Expect = 4e-06
Identities = 23/44 (52%), Positives = 31/44 (70%)
Frame = +2
Query: 8 CSWVEVVGLGLHTFITGDQNHPEAKGIYGMLHGLVRQMRELGSV 139
CSWVEV G G+H F+TGD+ HP A+ IY +HG+ +R+ G V
Sbjct: 566 CSWVEVAGDGVHAFVTGDKGHPRAEAIYAAVHGIAGWVRDGGCV 609
>ref|XP_020580751.1| pentatricopeptide repeat-containing protein At3g14730-like
[Phalaenopsis equestris]
Length = 631
Score = 57.0 bits (136), Expect = 6e-06
Identities = 24/49 (48%), Positives = 35/49 (71%)
Frame = +2
Query: 8 CSWVEVVGLGLHTFITGDQNHPEAKGIYGMLHGLVRQMRELGSVPNVFM 154
CSWVEV G G+HTF+TG++ HP A+ IY ++H L +R+ GS+ V +
Sbjct: 576 CSWVEVAGHGVHTFVTGERCHPRAQAIYAVIHELAGWIRDGGSLALVVL 624
>gb|ESR58549.1| hypothetical protein CICLE_v10024593mg [Citrus clementina]
Length = 651
Score = 56.6 bits (135), Expect = 8e-06
Identities = 27/60 (45%), Positives = 39/60 (65%)
Frame = +2
Query: 8 CSWVEVVGLGLHTFITGDQNHPEAKGIYGMLHGLVRQMRELGSVPNVFMQETDEQEEEAL 187
CSW+E+ GLHTFI+ D++HPEAK IY LH L ++RE G + ++ +Q +AL
Sbjct: 584 CSWIELKD-GLHTFISSDRSHPEAKSIYAELHSLTARLREHGDCCAGTLFDSGKQNSQAL 642