BLASTX nr result

ID: Ophiopogon25_contig00008132 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00008132
         (411 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020260671.1| ATP-dependent Clp protease proteolytic subun...    58   3e-07
ref|XP_020247842.1| ATP-dependent Clp protease proteolytic subun...    55   5e-06

>ref|XP_020260671.1| ATP-dependent Clp protease proteolytic subunit 4,
           chloroplastic-like [Asparagus officinalis]
 gb|ONK71578.1| uncharacterized protein A4U43_C04F10140 [Asparagus officinalis]
          Length = 302

 Score = 58.2 bits (139), Expect = 3e-07
 Identities = 38/75 (50%), Positives = 43/75 (57%), Gaps = 7/75 (9%)
 Frame = -3

Query: 205 MASLSISTPFKPSVVLSTITKKPLKAQTLSFKPASLPQINAIASSSSRSK-------PAQ 47
           MASLSIS PFK S   S+ ++KP    T SFKP  L +I+A AS SS SK          
Sbjct: 1   MASLSISAPFKASTAPSSTSRKPPNPATFSFKPCPL-KISAFASPSSPSKLVSHANSSGL 59

Query: 46  GTELGLGSGFSPFPS 2
           G   GLG GFSPF S
Sbjct: 60  GLHSGLGLGFSPFSS 74


>ref|XP_020247842.1| ATP-dependent Clp protease proteolytic subunit 4, chloroplastic
           [Asparagus officinalis]
 gb|ONK55752.1| uncharacterized protein A4U43_C10F630 [Asparagus officinalis]
          Length = 290

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 34/68 (50%), Positives = 43/68 (63%)
 Frame = -3

Query: 205 MASLSISTPFKPSVVLSTITKKPLKAQTLSFKPASLPQINAIASSSSRSKPAQGTELGLG 26
           M SLSIS+ FKPS++ S+IT+KPLK  +LSFKP S  Q++A A S     P  G + GLG
Sbjct: 1   MISLSISSAFKPSIIPSSITQKPLKPPSLSFKP-SPSQVSATAES-----PRLGLDSGLG 54

Query: 25  SGFSPFPS 2
             F    S
Sbjct: 55  LEFPAISS 62


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