BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00008071
         (1542 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010934798.1| PREDICTED: cleavage and polyadenylation spec...   815   0.0  
ref|XP_008787501.1| PREDICTED: cleavage and polyadenylation spec...   805   0.0  
gb|PKA58817.1| Cleavage and polyadenylation specificity factor s...   800   0.0  
ref|XP_020682990.1| cleavage and polyadenylation specificity fac...   793   0.0  
ref|XP_020574588.1| cleavage and polyadenylation specificity fac...   791   0.0  
ref|XP_009401035.1| PREDICTED: cleavage and polyadenylation spec...   789   0.0  
ref|XP_020079754.1| cleavage and polyadenylation specificity fac...   781   0.0  
ref|XP_020079753.1| cleavage and polyadenylation specificity fac...   781   0.0  
ref|XP_006661571.1| PREDICTED: cleavage and polyadenylation spec...   756   0.0  
ref|XP_020273835.1| LOW QUALITY PROTEIN: cleavage and polyadenyl...   756   0.0  
ref|XP_010662728.1| PREDICTED: cleavage and polyadenylation spec...   753   0.0  
ref|XP_002268591.1| PREDICTED: cleavage and polyadenylation spec...   753   0.0  
gb|KQK02330.1| hypothetical protein BRADI_2g00840v3 [Brachypodiu...   750   0.0  
gb|PNT69812.1| hypothetical protein BRADI_2g00840v3 [Brachypodiu...   750   0.0  
ref|XP_010255376.1| PREDICTED: cleavage and polyadenylation spec...   752   0.0  
ref|XP_015611669.1| PREDICTED: cleavage and polyadenylation spec...   751   0.0  
ref|XP_003565596.1| PREDICTED: cleavage and polyadenylation spec...   750   0.0  
ref|XP_010230345.1| PREDICTED: cleavage and polyadenylation spec...   750   0.0  
ref|XP_003578687.1| PREDICTED: cleavage and polyadenylation spec...   749   0.0  
ref|XP_010238537.1| PREDICTED: cleavage and polyadenylation spec...   749   0.0  

>ref|XP_010934798.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 2
            [Elaeis guineensis]
          Length = 739

 Score =  815 bits (2105), Expect = 0.0
 Identities = 413/500 (82%), Positives = 442/500 (88%)
 Frame = +1

Query: 1    ALELILILEQYWAQQHLTYPIFFLTNVATSTIDYVKSFLEWMSDSIAKSFEHTRDNAFLL 180
            ALELILILEQYWAQQHLT+PIFFLTNVATS+IDYVKSFLEWMSDSIAKSFEHTRDNAF L
Sbjct: 242  ALELILILEQYWAQQHLTFPIFFLTNVATSSIDYVKSFLEWMSDSIAKSFEHTRDNAFAL 301

Query: 181  RHVNLIINKSDLEKSPDVPKVVLASMASLEVGSSHDIFVELATEAKNLVLFTEKGQFGTL 360
            +HV LIINK++LEK  +VPKVVLASMASLEVG SHDIFVE A EAKNLVLFTEKGQFGTL
Sbjct: 302  KHVTLIINKNELEKLAEVPKVVLASMASLEVGFSHDIFVEWAIEAKNLVLFTEKGQFGTL 361

Query: 361  ARMLQVDPPPKAVKVAMSKRIPLVGDELKAYXXXXXXXXXXXALKATLSKEEELKASRGV 540
            ARMLQVDPPPKAVKV MSKR+PLVGDELKAY           ALKATL KEEEL+ S+G 
Sbjct: 362  ARMLQVDPPPKAVKVTMSKRVPLVGDELKAYEEEQSRIKKEEALKATLIKEEELRTSQGA 421

Query: 541  DANVGDPMVIDATSPRVPSNGNAASSRFGGNRDILIDGFIPPATSVAPMFPFYENSADWD 720
            DANV  PMVIDA S     + N ASSRFGG+ DI+IDGFIPPATSVAPMFPF+EN+A+WD
Sbjct: 422  DANVAVPMVIDANSSH--GSSNVASSRFGGHLDIVIDGFIPPATSVAPMFPFFENTAEWD 479

Query: 721  DYGEIINPDDYIIKDEDMDQPSAQGIGGDLAGKLDEGSAHLLLDSTPSKVVPNEMTVQVK 900
            DYGEIINPDDYIIK+EDMDQ S QGIG +L GKLDEGSAHLLLDSTPSKVV NEMTVQVK
Sbjct: 480  DYGEIINPDDYIIKEEDMDQASMQGIGVELDGKLDEGSAHLLLDSTPSKVVSNEMTVQVK 539

Query: 901  CALLYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCSKHVCPHVYAPQIQ 1080
            C L YMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHC+KHVCPHVYAPQI 
Sbjct: 540  CGLTYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCAKHVCPHVYAPQID 599

Query: 1081 ETIDVTSDLCAYKVQLSEKLMSNVLLKKLGEYEIAWVDAEVGKSNDXXXXXXXXXXXXAH 1260
            ETIDVTSDLCAYKVQLSE+LMSNV+ KKLG+YEIAW+DAEVGK+ND             H
Sbjct: 600  ETIDVTSDLCAYKVQLSERLMSNVIFKKLGDYEIAWIDAEVGKTNDILTLGPLSSTPPTH 659

Query: 1261 DSVLVGDLKLADFKQFLASKGIQVEFAGGALRCGEYVTLRKVSDSSQKGGTGTQQVLIEG 1440
             +VLVGDLKLADFKQFLASKG+QVEFAGGALRCGEYVTLRK+SDS+QKG TGTQQV+IEG
Sbjct: 660  KTVLVGDLKLADFKQFLASKGVQVEFAGGALRCGEYVTLRKISDSNQKGVTGTQQVVIEG 719

Query: 1441 PLTEEYYKIRDLLYSQFYLL 1500
            PLTEEYYKIR+ LYSQFYLL
Sbjct: 720  PLTEEYYKIREHLYSQFYLL 739


>ref|XP_008787501.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 2
            [Phoenix dactylifera]
          Length = 739

 Score =  805 bits (2078), Expect = 0.0
 Identities = 407/499 (81%), Positives = 439/499 (87%)
 Frame = +1

Query: 4    LELILILEQYWAQQHLTYPIFFLTNVATSTIDYVKSFLEWMSDSIAKSFEHTRDNAFLLR 183
            LELILILEQYWAQQHLT+PIFFLTNV+TSTIDYVKSFLEWMSDSIAKSFEHTRDNAF L+
Sbjct: 243  LELILILEQYWAQQHLTFPIFFLTNVSTSTIDYVKSFLEWMSDSIAKSFEHTRDNAFALK 302

Query: 184  HVNLIINKSDLEKSPDVPKVVLASMASLEVGSSHDIFVELATEAKNLVLFTEKGQFGTLA 363
            HV LIINK++LEK  +VPKVVLASMASLEVG SHDIFVE ATEAKNLVLFTEKGQFGTLA
Sbjct: 303  HVTLIINKNELEKLAEVPKVVLASMASLEVGFSHDIFVEWATEAKNLVLFTEKGQFGTLA 362

Query: 364  RMLQVDPPPKAVKVAMSKRIPLVGDELKAYXXXXXXXXXXXALKATLSKEEELKASRGVD 543
            RMLQVDPPPKAVKV MSKR+PL G+ELKAY           ALKA L KEEEL+ S G D
Sbjct: 363  RMLQVDPPPKAVKVTMSKRVPLGGEELKAYEEEQSRIKKEEALKANLIKEEELRTSPGAD 422

Query: 544  ANVGDPMVIDATSPRVPSNGNAASSRFGGNRDILIDGFIPPATSVAPMFPFYENSADWDD 723
            ANV  PMVIDA S  V SN   ASSRFG + DI+IDGFIPPATSV+PMFPF+EN+A+WDD
Sbjct: 423  ANVAVPMVIDANSSHVSSN--VASSRFGEHLDIVIDGFIPPATSVSPMFPFFENTAEWDD 480

Query: 724  YGEIINPDDYIIKDEDMDQPSAQGIGGDLAGKLDEGSAHLLLDSTPSKVVPNEMTVQVKC 903
            YGEIINPDDYIIK+EDMDQ S Q IGG+L GKLDEGSAHLLLDSTPSKVV NEMTVQVKC
Sbjct: 481  YGEIINPDDYIIKEEDMDQASMQCIGGELDGKLDEGSAHLLLDSTPSKVVSNEMTVQVKC 540

Query: 904  ALLYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCSKHVCPHVYAPQIQE 1083
             L YMDFEGRSDGRS+KSILAHVAPLKLVLVHGSAEATEHLKQHC+KHVCPHVYAPQI E
Sbjct: 541  GLTYMDFEGRSDGRSVKSILAHVAPLKLVLVHGSAEATEHLKQHCAKHVCPHVYAPQIDE 600

Query: 1084 TIDVTSDLCAYKVQLSEKLMSNVLLKKLGEYEIAWVDAEVGKSNDXXXXXXXXXXXXAHD 1263
            TIDVTSDLCAYKVQLSE+LMSNV+ KK+G+YEIAW+DAEVGK+ND             H 
Sbjct: 601  TIDVTSDLCAYKVQLSERLMSNVIFKKMGDYEIAWIDAEVGKTNDMLTLGPLSSTPPTHK 660

Query: 1264 SVLVGDLKLADFKQFLASKGIQVEFAGGALRCGEYVTLRKVSDSSQKGGTGTQQVLIEGP 1443
            +VLVGDLKLADFKQFLASKG+QVEFAGGALRCGEYVT+RK+SDS+QKG TGTQQV+IEGP
Sbjct: 661  TVLVGDLKLADFKQFLASKGVQVEFAGGALRCGEYVTVRKISDSNQKGVTGTQQVVIEGP 720

Query: 1444 LTEEYYKIRDLLYSQFYLL 1500
            LTEEYYKIR+ LYSQFYLL
Sbjct: 721  LTEEYYKIREHLYSQFYLL 739


>gb|PKA58817.1| Cleavage and polyadenylation specificity factor subunit 2 [Apostasia
            shenzhenica]
          Length = 738

 Score =  800 bits (2066), Expect = 0.0
 Identities = 401/499 (80%), Positives = 440/499 (88%)
 Frame = +1

Query: 4    LELILILEQYWAQQHLTYPIFFLTNVATSTIDYVKSFLEWMSDSIAKSFEHTRDNAFLLR 183
            LELILILEQYW QQHLT+PI+FLTNVATST+DYVKSFLEWMSDSIAKSF H+RDNAFLL+
Sbjct: 243  LELILILEQYWTQQHLTFPIYFLTNVATSTVDYVKSFLEWMSDSIAKSFGHSRDNAFLLK 302

Query: 184  HVNLIINKSDLEKSPDVPKVVLASMASLEVGSSHDIFVELATEAKNLVLFTEKGQFGTLA 363
            HV LIINKS+LE+ PDVPKVVLASMASLEVG SHDIFVE AT+A+NLVLFTE+GQFGTLA
Sbjct: 303  HVALIINKSELEQLPDVPKVVLASMASLEVGFSHDIFVEWATDARNLVLFTERGQFGTLA 362

Query: 364  RMLQVDPPPKAVKVAMSKRIPLVGDELKAYXXXXXXXXXXXALKATLSKEEELKASRGVD 543
            RMLQVDPPPK VKV MSKRIPLVGDELKAY           ALKA+L+KEEEL+AS+G D
Sbjct: 363  RMLQVDPPPKVVKVTMSKRIPLVGDELKAYEEEQERIKKEAALKASLTKEEELRASKGTD 422

Query: 544  ANVGDPMVIDATSPRVPSNGNAASSRFGGNRDILIDGFIPPATSVAPMFPFYENSADWDD 723
            AN+GDPMVIDA SP + S+    +SRFG  RDI IDGF+P  T VAPMFPF+ENS++WDD
Sbjct: 423  ANIGDPMVIDAASPLISSD---VASRFGRFRDIFIDGFVPTPTGVAPMFPFFENSSEWDD 479

Query: 724  YGEIINPDDYIIKDEDMDQPSAQGIGGDLAGKLDEGSAHLLLDSTPSKVVPNEMTVQVKC 903
            YGE+INPDDYIIK+ED+D  SAQGIGGDL GKLDE SAHLLLD+TPSKVV NEMTVQVKC
Sbjct: 480  YGEVINPDDYIIKEEDIDVASAQGIGGDLNGKLDETSAHLLLDTTPSKVVSNEMTVQVKC 539

Query: 904  ALLYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCSKHVCPHVYAPQIQE 1083
            +LLYMDFEGRSDGRSIKSILAHVAPLKLVL+HGSAEATEHLK+HCSKHVCP VYAPQI+E
Sbjct: 540  SLLYMDFEGRSDGRSIKSILAHVAPLKLVLLHGSAEATEHLKEHCSKHVCPQVYAPQIEE 599

Query: 1084 TIDVTSDLCAYKVQLSEKLMSNVLLKKLGEYEIAWVDAEVGKSNDXXXXXXXXXXXXAHD 1263
             IDVTSDLCAYKVQLSEKLMSNVL KKLG+YEI+W+DAEVGK+ D            +H 
Sbjct: 600  KIDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEISWLDAEVGKTEDMLTLLPLSSTPPSHK 659

Query: 1264 SVLVGDLKLADFKQFLASKGIQVEFAGGALRCGEYVTLRKVSDSSQKGGTGTQQVLIEGP 1443
            SVLVGDLKLADFKQFLASKGIQVEF+GGALRCGEYVTLRKV DSS KGGTG Q VL+EGP
Sbjct: 660  SVLVGDLKLADFKQFLASKGIQVEFSGGALRCGEYVTLRKVGDSSHKGGTGAQHVLLEGP 719

Query: 1444 LTEEYYKIRDLLYSQFYLL 1500
            LTEEYY+IR+LLYSQFYLL
Sbjct: 720  LTEEYYQIRELLYSQFYLL 738


>ref|XP_020682990.1| cleavage and polyadenylation specificity factor subunit 2 isoform X1
            [Dendrobium catenatum]
          Length = 737

 Score =  793 bits (2049), Expect = 0.0
 Identities = 398/499 (79%), Positives = 440/499 (88%)
 Frame = +1

Query: 1    ALELILILEQYWAQQHLTYPIFFLTNVATSTIDYVKSFLEWMSDSIAKSFEHTRDNAFLL 180
            ALEL+LILEQYW+QQHLT+PIFFLTNVATSTIDYVKSFLEWMSDSIAKSFEHTRDNAFLL
Sbjct: 242  ALELLLILEQYWSQQHLTFPIFFLTNVATSTIDYVKSFLEWMSDSIAKSFEHTRDNAFLL 301

Query: 181  RHVNLIINKSDLEKSPDVPKVVLASMASLEVGSSHDIFVELATEAKNLVLFTEKGQFGTL 360
            +H+NLIINKS+LE   DVPKVVLASM SLEVG SHDIFV+ ATEA++ +LFTE+GQFGTL
Sbjct: 302  KHINLIINKSELENIADVPKVVLASMPSLEVGFSHDIFVDWATEARHAILFTERGQFGTL 361

Query: 361  ARMLQVDPPPKAVKVAMSKRIPLVGDELKAYXXXXXXXXXXXALKATLSKEEELKASRGV 540
            ARMLQVDPPPKAVKV MSKRIPL GDELKAY           ALKA+LSKE  L+AS+G 
Sbjct: 362  ARMLQVDPPPKAVKVTMSKRIPLAGDELKAYEEEQERIKKEAALKASLSKE--LRASQGS 419

Query: 541  DANVGDPMVIDATSPRVPSNGNAASSRFGGNRDILIDGFIPPATSVAPMFPFYENSADWD 720
            DAN GD MVIDA+S  +  + + A+SR GG RDI +DGF PPATSVAPMFPF+ENSA+WD
Sbjct: 420  DANAGDAMVIDASSSHI--SADVAASRIGGFRDIFMDGFAPPATSVAPMFPFFENSAEWD 477

Query: 721  DYGEIINPDDYIIKDEDMDQPSAQGIGGDLAGKLDEGSAHLLLDSTPSKVVPNEMTVQVK 900
            DYGE+INPDDYIIK+EDM+  SAQG GGDL GKLDEGSAHLLLD+TPSKVV NE+TVQVK
Sbjct: 478  DYGEVINPDDYIIKEEDMNGASAQGFGGDLDGKLDEGSAHLLLDTTPSKVVSNELTVQVK 537

Query: 901  CALLYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCSKHVCPHVYAPQIQ 1080
            C+L+YMDFEGRS+GRSIKSILAHVAPLKLVLVHGSAEATEHLK+HCSKHVCPHVYAPQI+
Sbjct: 538  CSLIYMDFEGRSEGRSIKSILAHVAPLKLVLVHGSAEATEHLKEHCSKHVCPHVYAPQIE 597

Query: 1081 ETIDVTSDLCAYKVQLSEKLMSNVLLKKLGEYEIAWVDAEVGKSNDXXXXXXXXXXXXAH 1260
            ETIDVTSDLCAYKVQLSE+LMSNVL KKLG+YEI+W+DAEVGK+ND             H
Sbjct: 598  ETIDVTSDLCAYKVQLSERLMSNVLFKKLGDYEISWIDAEVGKTNDMLTLFPVSSTPPTH 657

Query: 1261 DSVLVGDLKLADFKQFLASKGIQVEFAGGALRCGEYVTLRKVSDSSQKGGTGTQQVLIEG 1440
             SVLVGDLKLADFKQFLASKGIQVEFAGGALRCGEYVTLRK+SD +QKGGT  Q V+IEG
Sbjct: 658  KSVLVGDLKLADFKQFLASKGIQVEFAGGALRCGEYVTLRKISDFTQKGGTVAQHVIIEG 717

Query: 1441 PLTEEYYKIRDLLYSQFYL 1497
            PLTEEYY+IR+LLYSQFYL
Sbjct: 718  PLTEEYYQIRELLYSQFYL 736


>ref|XP_020574588.1| cleavage and polyadenylation specificity factor subunit 2 isoform X1
            [Phalaenopsis equestris]
          Length = 737

 Score =  791 bits (2044), Expect = 0.0
 Identities = 394/499 (78%), Positives = 439/499 (87%)
 Frame = +1

Query: 4    LELILILEQYWAQQHLTYPIFFLTNVATSTIDYVKSFLEWMSDSIAKSFEHTRDNAFLLR 183
            LEL+LILEQYW+QQHL++PIFFLTNVATS+IDYVKSFLEWMSDSIAKSFEHTRDNAFLL+
Sbjct: 243  LELLLILEQYWSQQHLSFPIFFLTNVATSSIDYVKSFLEWMSDSIAKSFEHTRDNAFLLK 302

Query: 184  HVNLIINKSDLEKSPDVPKVVLASMASLEVGSSHDIFVELATEAKNLVLFTEKGQFGTLA 363
            H+N+IINKS+LE  PD+PKVVLASM SLEVG SHDIFV+ ATEA++ +LFTE+GQFGTLA
Sbjct: 303  HINIIINKSELENIPDIPKVVLASMPSLEVGFSHDIFVDWATEARHTILFTERGQFGTLA 362

Query: 364  RMLQVDPPPKAVKVAMSKRIPLVGDELKAYXXXXXXXXXXXALKATLSKEEELKASRGVD 543
            RMLQVDPPPKAVKV MSKRIPL+GDELKAY           ALK+ ++KE  L+AS+G D
Sbjct: 363  RMLQVDPPPKAVKVTMSKRIPLIGDELKAYEEEQERIKKEAALKSNVNKE--LRASQGSD 420

Query: 544  ANVGDPMVIDATSPRVPSNGNAASSRFGGNRDILIDGFIPPATSVAPMFPFYENSADWDD 723
            A  GD MVIDA+S  + S+  A  SR GG RDI IDGF+PPATSVAPMFP++ENSA+WDD
Sbjct: 421  AKAGDTMVIDASSSHISSDVTA--SRVGGFRDIFIDGFVPPATSVAPMFPYFENSAEWDD 478

Query: 724  YGEIINPDDYIIKDEDMDQPSAQGIGGDLAGKLDEGSAHLLLDSTPSKVVPNEMTVQVKC 903
            YGE+INPDDYIIKDEDM+  SAQG GGD+  KLDEGSAHLLLD+TPSKVV NE+TVQVKC
Sbjct: 479  YGEVINPDDYIIKDEDMNGASAQGFGGDIDNKLDEGSAHLLLDTTPSKVVSNELTVQVKC 538

Query: 904  ALLYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCSKHVCPHVYAPQIQE 1083
            +L+YMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLK+HCSKHVCPHVYAPQI+E
Sbjct: 539  SLVYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKEHCSKHVCPHVYAPQIEE 598

Query: 1084 TIDVTSDLCAYKVQLSEKLMSNVLLKKLGEYEIAWVDAEVGKSNDXXXXXXXXXXXXAHD 1263
            TIDVTS LCAYKVQLSE+LMSNVL KKLGEYEI+W+DAE GK+ND             H 
Sbjct: 599  TIDVTSSLCAYKVQLSERLMSNVLFKKLGEYEISWIDAEAGKTNDMLTLFPVSSTPPTHK 658

Query: 1264 SVLVGDLKLADFKQFLASKGIQVEFAGGALRCGEYVTLRKVSDSSQKGGTGTQQVLIEGP 1443
            SVLVGDLKLADFKQFLASKGIQVEF+GGALRCGEYVTLRK+SDS+QKGGTG Q VLIEGP
Sbjct: 659  SVLVGDLKLADFKQFLASKGIQVEFSGGALRCGEYVTLRKISDSTQKGGTGAQHVLIEGP 718

Query: 1444 LTEEYYKIRDLLYSQFYLL 1500
            LTEEYY+IRDLLYSQFYLL
Sbjct: 719  LTEEYYQIRDLLYSQFYLL 737


>ref|XP_009401035.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 2
            [Musa acuminata subsp. malaccensis]
          Length = 735

 Score =  789 bits (2038), Expect = 0.0
 Identities = 399/500 (79%), Positives = 433/500 (86%)
 Frame = +1

Query: 1    ALELILILEQYWAQQHLTYPIFFLTNVATSTIDYVKSFLEWMSDSIAKSFEHTRDNAFLL 180
            ALELILILE YWAQQHL++PIFFLTNVATSTIDYVKSFLEWMSDSIAKSFEHTRDNAFLL
Sbjct: 242  ALELILILEHYWAQQHLSFPIFFLTNVATSTIDYVKSFLEWMSDSIAKSFEHTRDNAFLL 301

Query: 181  RHVNLIINKSDLEKSPDVPKVVLASMASLEVGSSHDIFVELATEAKNLVLFTEKGQFGTL 360
            +HVNLIINKS+LEK  +VPKVVLASMASLEVG SHDIFVE ATEAKNLVLFTEKGQFGTL
Sbjct: 302  KHVNLIINKSELEKIAEVPKVVLASMASLEVGFSHDIFVEWATEAKNLVLFTEKGQFGTL 361

Query: 361  ARMLQVDPPPKAVKVAMSKRIPLVGDELKAYXXXXXXXXXXXALKATLSKEEELKASRGV 540
            ARMLQVDPPPKAVKV +SKR+PLVGDELKAY           ALK TLSKEEEL+AS G 
Sbjct: 362  ARMLQVDPPPKAVKVTLSKRVPLVGDELKAYEEEQNRIKKEEALKVTLSKEEELRASHGS 421

Query: 541  DANVGDPMVIDATSPRVPSNGNAASSRFGGNRDILIDGFIPPATSVAPMFPFYENSADWD 720
            DANV DPMVID +S  + S   A+ SR  G+ DI IDGFIPPATSVAPMFPF+E  A+WD
Sbjct: 422  DANVADPMVIDVSSSHISS---ASGSRSSGHLDIFIDGFIPPATSVAPMFPFFETKAEWD 478

Query: 721  DYGEIINPDDYIIKDEDMDQPSAQGIGGDLAGKLDEGSAHLLLDSTPSKVVPNEMTVQVK 900
            DYGE+INPDDYI+K+ED DQ   QG   DL GKL+EGSAHLLLDS PSKV+ NE+TVQVK
Sbjct: 479  DYGEVINPDDYIMKEEDQDQALMQG---DLDGKLEEGSAHLLLDSAPSKVISNEITVQVK 535

Query: 901  CALLYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCSKHVCPHVYAPQIQ 1080
            C L YMDFEGRSDGRS+KSI++HVAPLKLVLVHGSAEATEHLKQHC KHVCPHVYAP I+
Sbjct: 536  CGLTYMDFEGRSDGRSVKSIISHVAPLKLVLVHGSAEATEHLKQHCIKHVCPHVYAPHIE 595

Query: 1081 ETIDVTSDLCAYKVQLSEKLMSNVLLKKLGEYEIAWVDAEVGKSNDXXXXXXXXXXXXAH 1260
            ETIDVTSDLCAYKVQLSE+LMSNVLLKKLG+YEIAWVDAEVGK+ND             H
Sbjct: 596  ETIDVTSDLCAYKVQLSERLMSNVLLKKLGDYEIAWVDAEVGKTNDMLTLLPLSSAPPTH 655

Query: 1261 DSVLVGDLKLADFKQFLASKGIQVEFAGGALRCGEYVTLRKVSDSSQKGGTGTQQVLIEG 1440
             SVL+GDLKLADFKQFLAS+G+QVEF GGALRCGE+VTLRK+SD+SQKGGTG QQ+LIEG
Sbjct: 656  KSVLIGDLKLADFKQFLASQGVQVEFTGGALRCGEHVTLRKISDASQKGGTGGQQILIEG 715

Query: 1441 PLTEEYYKIRDLLYSQFYLL 1500
            PLTEEYYKIR  LYSQFYLL
Sbjct: 716  PLTEEYYKIRKHLYSQFYLL 735


>ref|XP_020079754.1| cleavage and polyadenylation specificity factor subunit 2 isoform X2
            [Ananas comosus]
          Length = 669

 Score =  781 bits (2016), Expect = 0.0
 Identities = 400/501 (79%), Positives = 430/501 (85%), Gaps = 1/501 (0%)
 Frame = +1

Query: 1    ALELILILEQYWAQQHLTYPIFFLTNVATSTIDYVKSFLEWMSDSIAKSFEHTRDNAFLL 180
            ALELILILEQYW QQHL++PIFFLTNVATSTIDYVKSFLEWMSDSIAKSF HTRDNAFLL
Sbjct: 171  ALELILILEQYWDQQHLSFPIFFLTNVATSTIDYVKSFLEWMSDSIAKSFGHTRDNAFLL 230

Query: 181  RHVNLIINKSDLEKSPDVPKVVLASMASLEVGSSHDIFVELATEAKNLVLFTEKGQFGTL 360
            +HV LIIN+++L+   DVPKVVLASMASLEVG SHDIFVELAT+AKNLVLFTEKGQFGTL
Sbjct: 231  KHVTLIINRNELDNFTDVPKVVLASMASLEVGFSHDIFVELATDAKNLVLFTEKGQFGTL 290

Query: 361  ARMLQVDPPPKAVKVAMSKRIPLVGDELKAYXXXXXXXXXXXALKATLSKEEELKASRGV 540
            ARMLQVDPPPKAVKV MSKRIPLVGDELKAY            LKA+L KEEE + S G 
Sbjct: 291  ARMLQVDPPPKAVKVIMSKRIPLVGDELKAYEEEQERIKKEATLKASLVKEEESRVSHGS 350

Query: 541  DANVGDPMVIDATSPRVPSNGNAASSRFGGNRDILIDGFIPPATSVAPMFPFYENSADWD 720
            DANV DPMVID +S  V SN   ASS  GG+ DI+IDGF+PP+TSVAPMFPF+EN+A+WD
Sbjct: 351  DANVADPMVIDVSSSHVSSN--IASSHLGGHMDIVIDGFVPPSTSVAPMFPFFENTAEWD 408

Query: 721  DYGEIINPDDYIIKDEDMDQPSAQGIGGDLAGKLDEGSAHLLLDSTPSKVVPNEMTVQVK 900
            DYGE+INPDDYI K+EDMDQ S    G  L GKLDEGSAHLLLDSTPSKVV +E TVQVK
Sbjct: 409  DYGEVINPDDYIRKEEDMDQFSMLATGDGLDGKLDEGSAHLLLDSTPSKVVSSETTVQVK 468

Query: 901  CALLYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCSKHVCPHVYAPQIQ 1080
            CAL YMDFEGRSDGRS+KSILAHVAPLKLVLVHGSAEATEHLK HC KHVCPHVYAPQI+
Sbjct: 469  CALTYMDFEGRSDGRSVKSILAHVAPLKLVLVHGSAEATEHLKMHCVKHVCPHVYAPQIE 528

Query: 1081 ETIDVTSDLCAYKVQLSEKLMSNVLLKKLGEYEIAWVDAEVGKSNDXXXXXXXXXXXXAH 1260
            ETIDVTSDLCAYKVQLSEKLMSNVL KKLGE+EI+WVDAEVGK++D            AH
Sbjct: 529  ETIDVTSDLCAYKVQLSEKLMSNVLFKKLGEHEISWVDAEVGKTDDMLTLLPLSSNPPAH 588

Query: 1261 DSVLVGDLKLADFKQFLASKGIQVEFA-GGALRCGEYVTLRKVSDSSQKGGTGTQQVLIE 1437
             SVLVGDLKLADFKQFLA KG+QVEFA GGALRCGEYVTLRK+SDSSQKG TG QQ+ IE
Sbjct: 589  KSVLVGDLKLADFKQFLAGKGVQVEFAGGGALRCGEYVTLRKISDSSQKGVTGAQQIAIE 648

Query: 1438 GPLTEEYYKIRDLLYSQFYLL 1500
            GPL EEYYKIRDLLYSQFY L
Sbjct: 649  GPLCEEYYKIRDLLYSQFYSL 669


>ref|XP_020079753.1| cleavage and polyadenylation specificity factor subunit 2 isoform X1
            [Ananas comosus]
 gb|OAY76565.1| Cleavage and polyadenylation specificity factor subunit 2 [Ananas
            comosus]
          Length = 740

 Score =  781 bits (2016), Expect = 0.0
 Identities = 400/501 (79%), Positives = 430/501 (85%), Gaps = 1/501 (0%)
 Frame = +1

Query: 1    ALELILILEQYWAQQHLTYPIFFLTNVATSTIDYVKSFLEWMSDSIAKSFEHTRDNAFLL 180
            ALELILILEQYW QQHL++PIFFLTNVATSTIDYVKSFLEWMSDSIAKSF HTRDNAFLL
Sbjct: 242  ALELILILEQYWDQQHLSFPIFFLTNVATSTIDYVKSFLEWMSDSIAKSFGHTRDNAFLL 301

Query: 181  RHVNLIINKSDLEKSPDVPKVVLASMASLEVGSSHDIFVELATEAKNLVLFTEKGQFGTL 360
            +HV LIIN+++L+   DVPKVVLASMASLEVG SHDIFVELAT+AKNLVLFTEKGQFGTL
Sbjct: 302  KHVTLIINRNELDNFTDVPKVVLASMASLEVGFSHDIFVELATDAKNLVLFTEKGQFGTL 361

Query: 361  ARMLQVDPPPKAVKVAMSKRIPLVGDELKAYXXXXXXXXXXXALKATLSKEEELKASRGV 540
            ARMLQVDPPPKAVKV MSKRIPLVGDELKAY            LKA+L KEEE + S G 
Sbjct: 362  ARMLQVDPPPKAVKVIMSKRIPLVGDELKAYEEEQERIKKEATLKASLVKEEESRVSHGS 421

Query: 541  DANVGDPMVIDATSPRVPSNGNAASSRFGGNRDILIDGFIPPATSVAPMFPFYENSADWD 720
            DANV DPMVID +S  V SN   ASS  GG+ DI+IDGF+PP+TSVAPMFPF+EN+A+WD
Sbjct: 422  DANVADPMVIDVSSSHVSSN--IASSHLGGHMDIVIDGFVPPSTSVAPMFPFFENTAEWD 479

Query: 721  DYGEIINPDDYIIKDEDMDQPSAQGIGGDLAGKLDEGSAHLLLDSTPSKVVPNEMTVQVK 900
            DYGE+INPDDYI K+EDMDQ S    G  L GKLDEGSAHLLLDSTPSKVV +E TVQVK
Sbjct: 480  DYGEVINPDDYIRKEEDMDQFSMLATGDGLDGKLDEGSAHLLLDSTPSKVVSSETTVQVK 539

Query: 901  CALLYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCSKHVCPHVYAPQIQ 1080
            CAL YMDFEGRSDGRS+KSILAHVAPLKLVLVHGSAEATEHLK HC KHVCPHVYAPQI+
Sbjct: 540  CALTYMDFEGRSDGRSVKSILAHVAPLKLVLVHGSAEATEHLKMHCVKHVCPHVYAPQIE 599

Query: 1081 ETIDVTSDLCAYKVQLSEKLMSNVLLKKLGEYEIAWVDAEVGKSNDXXXXXXXXXXXXAH 1260
            ETIDVTSDLCAYKVQLSEKLMSNVL KKLGE+EI+WVDAEVGK++D            AH
Sbjct: 600  ETIDVTSDLCAYKVQLSEKLMSNVLFKKLGEHEISWVDAEVGKTDDMLTLLPLSSNPPAH 659

Query: 1261 DSVLVGDLKLADFKQFLASKGIQVEFA-GGALRCGEYVTLRKVSDSSQKGGTGTQQVLIE 1437
             SVLVGDLKLADFKQFLA KG+QVEFA GGALRCGEYVTLRK+SDSSQKG TG QQ+ IE
Sbjct: 660  KSVLVGDLKLADFKQFLAGKGVQVEFAGGGALRCGEYVTLRKISDSSQKGVTGAQQIAIE 719

Query: 1438 GPLTEEYYKIRDLLYSQFYLL 1500
            GPL EEYYKIRDLLYSQFY L
Sbjct: 720  GPLCEEYYKIRDLLYSQFYSL 740


>ref|XP_006661571.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 2
            [Oryza brachyantha]
          Length = 738

 Score =  756 bits (1951), Expect = 0.0
 Identities = 376/499 (75%), Positives = 429/499 (85%)
 Frame = +1

Query: 4    LELILILEQYWAQQHLTYPIFFLTNVATSTIDYVKSFLEWMSDSIAKSFEHTRDNAFLLR 183
            LE++LILEQYWAQ+HL YPI+FLTNV+TST+DYVKSFLEWM+DSI+KSFEHTRDNAFLL+
Sbjct: 243  LEILLILEQYWAQRHLIYPIYFLTNVSTSTVDYVKSFLEWMNDSISKSFEHTRDNAFLLK 302

Query: 184  HVNLIINKSDLEKSPDVPKVVLASMASLEVGSSHDIFVELATEAKNLVLFTEKGQFGTLA 363
            +V LIINK ++EK  D PKVVLASMASLEVG SHDIFV++A EAKNLVLFTEKGQFGTLA
Sbjct: 303  NVTLIINKDEIEKLGDAPKVVLASMASLEVGFSHDIFVDMANEAKNLVLFTEKGQFGTLA 362

Query: 364  RMLQVDPPPKAVKVAMSKRIPLVGDELKAYXXXXXXXXXXXALKATLSKEEELKASRGVD 543
            RMLQVDPPPKAVKV MSKRIPLVGDELKAY           ALK +L+KEEE KAS G +
Sbjct: 363  RMLQVDPPPKAVKVTMSKRIPLVGDELKAYEEEQERIKKEEALKVSLNKEEERKASLGSN 422

Query: 544  ANVGDPMVIDATSPRVPSNGNAASSRFGGNRDILIDGFIPPATSVAPMFPFYENSADWDD 723
            A V DPMVIDA++ R PSN   A S+FGGN DILIDGF+PP+TSVAPMFPF+EN+++WDD
Sbjct: 423  AKVSDPMVIDASTSRKPSN---AGSQFGGNVDILIDGFVPPSTSVAPMFPFFENTSEWDD 479

Query: 724  YGEIINPDDYIIKDEDMDQPSAQGIGGDLAGKLDEGSAHLLLDSTPSKVVPNEMTVQVKC 903
            +GE+INP+DY++K E+MD     G G  +  KLDEGSA LLLDSTPSKV+ NE TVQVKC
Sbjct: 480  FGEVINPEDYVMKQEEMDNILMAGAGDGMDSKLDEGSARLLLDSTPSKVISNEKTVQVKC 539

Query: 904  ALLYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCSKHVCPHVYAPQIQE 1083
            +L YMDFEGRSDGRS+KS++AHVAPLKLVLVHGSAEATEHLK HCSK+   HVYAPQI+E
Sbjct: 540  SLAYMDFEGRSDGRSVKSVIAHVAPLKLVLVHGSAEATEHLKMHCSKNSDLHVYAPQIEE 599

Query: 1084 TIDVTSDLCAYKVQLSEKLMSNVLLKKLGEYEIAWVDAEVGKSNDXXXXXXXXXXXXAHD 1263
            TIDVTSDLCAYKVQLSEKLMSNVL KKLGE+EIAWVDAE+GK++D            AH 
Sbjct: 600  TIDVTSDLCAYKVQLSEKLMSNVLSKKLGEHEIAWVDAELGKADDKLTLLAPSSTPAAHK 659

Query: 1264 SVLVGDLKLADFKQFLASKGIQVEFAGGALRCGEYVTLRKVSDSSQKGGTGTQQVLIEGP 1443
            SVLVGDLKLADFKQFLA+KG+QVEFAGGALRCGEY+TLRK+ D+SQKG TG QQ++IEGP
Sbjct: 660  SVLVGDLKLADFKQFLANKGLQVEFAGGALRCGEYITLRKIGDASQKGSTGCQQIVIEGP 719

Query: 1444 LTEEYYKIRDLLYSQFYLL 1500
            L E+YYKIR+LLYSQFYLL
Sbjct: 720  LCEDYYKIRELLYSQFYLL 738


>ref|XP_020273835.1| LOW QUALITY PROTEIN: cleavage and polyadenylation specificity factor
            subunit 2 [Asparagus officinalis]
          Length = 743

 Score =  756 bits (1951), Expect = 0.0
 Identities = 397/507 (78%), Positives = 425/507 (83%), Gaps = 7/507 (1%)
 Frame = +1

Query: 1    ALELILILEQYWAQQHLTYPIFFLTNVATSTIDYVKSFLEWMSDSIAKSFEHTRDNAFLL 180
            ALELILILEQYWAQ+ LTYPIFFLTNV++ST+ YV S LEWMSDSIA SFEH+R+NAF L
Sbjct: 242  ALELILILEQYWAQERLTYPIFFLTNVSSSTLKYVMSSLEWMSDSIANSFEHSRNNAFQL 301

Query: 181  RHVNLIINKSDLEKSPDVPKVVLASMASLEVGSSHDIFVELATEAKNLVLFTEKGQFGTL 360
            R+V+L INKSDLEKSP+ PKVVLASMASLE GSSHD+FVE ATEAKNLVLFTEKGQFGTL
Sbjct: 302  RYVDLKINKSDLEKSPEGPKVVLASMASLEFGSSHDLFVEWATEAKNLVLFTEKGQFGTL 361

Query: 361  ARMLQVDPPPKAVKVAMSKRIPLVGDELKAYXXXXXXXXXXXALKATLSKEEELKASRGV 540
            ARMLQVDPPPKAVKV MSKRIPLVGDELKAY           ALK TL KEEE + S G 
Sbjct: 362  ARMLQVDPPPKAVKVTMSKRIPLVGDELKAYEEEQERIKQEEALKVTLIKEEEQRTSHG- 420

Query: 541  DANVGDPMVIDATSPRVPSNGNAASSRFGGNRDILIDGFIPPATSVAPMFPFYENSADWD 720
            DANVGDPMVIDATS +  +  + A+SRFGGNRDILIDGFIP ATSVAPMFPFYENSA+WD
Sbjct: 421  DANVGDPMVIDATSSQTAT--DVATSRFGGNRDILIDGFIPSATSVAPMFPFYENSAEWD 478

Query: 721  DYGEIINPDDYIIKDEDMDQPSAQGIGGDLAGKLDEGSAHLLLDSTPSKVVPNEMTVQVK 900
            DYGEIINPDDYI KDEDMDQPSAQGIGGDLAGKLDE SA LLLDSTPSKVV NE+TVQVK
Sbjct: 479  DYGEIINPDDYITKDEDMDQPSAQGIGGDLAGKLDEVSAQLLLDSTPSKVVSNEVTVQVK 538

Query: 901  CALLYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHL-------KQHCSKHVCPH 1059
            CAL++MDFEGRSDGRS+KSILAHVAPLKLV    + +    L          C KHVCPH
Sbjct: 539  CALVHMDFEGRSDGRSVKSILAHVAPLKLVCTXNNGKYKTXLYFMLYWXXXXCLKHVCPH 598

Query: 1060 VYAPQIQETIDVTSDLCAYKVQLSEKLMSNVLLKKLGEYEIAWVDAEVGKSNDXXXXXXX 1239
            VYAPQI+E IDVTSDLCAYKVQLSEKLMSNVL KKLGEYEIAW+DAEVG +ND       
Sbjct: 599  VYAPQIEEPIDVTSDLCAYKVQLSEKLMSNVLFKKLGEYEIAWIDAEVGNTNDMLSLLPL 658

Query: 1240 XXXXXAHDSVLVGDLKLADFKQFLASKGIQVEFAGGALRCGEYVTLRKVSDSSQKGGTGT 1419
                  HDSVLVGDLKLADFKQFLASK IQVEFAGG LRCGEYVTLRKVS+ SQK   G 
Sbjct: 659  SSKPPPHDSVLVGDLKLADFKQFLASKDIQVEFAGGVLRCGEYVTLRKVSNPSQK--AGA 716

Query: 1420 QQVLIEGPLTEEYYKIRDLLYSQFYLL 1500
            QQV+IEGPLTEEYY+IRDLLYSQFYLL
Sbjct: 717  QQVVIEGPLTEEYYRIRDLLYSQFYLL 743


>ref|XP_010662728.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 2
            isoform X2 [Vitis vinifera]
          Length = 691

 Score =  753 bits (1945), Expect = 0.0
 Identities = 376/501 (75%), Positives = 430/501 (85%), Gaps = 2/501 (0%)
 Frame = +1

Query: 4    LELILILEQYWAQQHLTYPIFFLTNVATSTIDYVKSFLEWMSDSIAKSFEHTRDNAFLLR 183
            LEL+LILEQYW Q HL YPIFFLT VA+STIDYVKSFLEWMSDSIAKSFEHTRDNAFLL+
Sbjct: 194  LELMLILEQYWTQHHLNYPIFFLTYVASSTIDYVKSFLEWMSDSIAKSFEHTRDNAFLLK 253

Query: 184  HVNLIINKSDLEKSPDVPKVVLASMASLEVGSSHDIFVELATEAKNLVLFTEKGQFGTLA 363
            HV L+I+KS+LEK PD PK+VLASMASLE G SHDIFVE AT+AKNLVLF+E+GQF TLA
Sbjct: 254  HVTLLISKSELEKVPDGPKIVLASMASLEAGFSHDIFVEWATDAKNLVLFSERGQFATLA 313

Query: 364  RMLQVDPPPKAVKVAMSKRIPLVGDELKAYXXXXXXXXXXXALKATLSKEEELKASRGVD 543
            RMLQ DPPPKAVKV MSKR+PLVG+EL AY           ALKA+LSKE+E+KASRG D
Sbjct: 314  RMLQADPPPKAVKVTMSKRVPLVGEELAAYEEEQERIKKEEALKASLSKEDEMKASRGSD 373

Query: 544  ANVGDPMVIDATSPRVPSNGNAASSRFGGNRDILIDGFIPPATSVAPMFPFYENSADWDD 723
              +GDPMVID T+P  P++ + A    GG+RDILIDGF+PP+TSVAPMFPFYENS++WDD
Sbjct: 374  NKLGDPMVIDTTTP--PASSDVAVPHVGGHRDILIDGFVPPSTSVAPMFPFYENSSEWDD 431

Query: 724  YGEIINPDDYIIKDEDMDQPSAQGIGGDLAGKLDEGSAHLLLDSTPSKVVPNEMTVQVKC 903
            +GE+INP+DY+IKDEDMDQ + Q +G DL GKLDEG+A L+ D+TPSKV+ NE+TVQVKC
Sbjct: 432  FGEVINPEDYVIKDEDMDQATMQ-VGDDLNGKLDEGAASLIFDTTPSKVISNELTVQVKC 490

Query: 904  ALLYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCSKHVCPHVYAPQIQE 1083
             L+YMDFEGRSDGRSIKSIL+HVAPLKLVLVHGSAEATEHLKQHC KHVCPHVYAPQI E
Sbjct: 491  MLVYMDFEGRSDGRSIKSILSHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYAPQIGE 550

Query: 1084 TIDVTSDLCAYKVQLSEKLMSNVLLKKLGEYEIAWVDAEVGKS-NDXXXXXXXXXXXXAH 1260
            TIDVTSDLCAYKVQLSEKLMSNVL KKLG+YE+AWVDAEVGK+ +             +H
Sbjct: 551  TIDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEVAWVDAEVGKTESGSLSLLPLSTPPPSH 610

Query: 1261 DSVLVGDLKLADFKQFLASKGIQVEFAGGALRCGEYVTLRKVSDSSQKGGTG-TQQVLIE 1437
            D+V VGD+K+ADFKQFLASKGIQVEF+GGALRCGEYVTLRKV D+SQKGG    QQ+++E
Sbjct: 611  DTVFVGDIKMADFKQFLASKGIQVEFSGGALRCGEYVTLRKVGDASQKGGGAIIQQIVME 670

Query: 1438 GPLTEEYYKIRDLLYSQFYLL 1500
            GPL +EYYKIR+ LYSQ+YLL
Sbjct: 671  GPLCDEYYKIREYLYSQYYLL 691


>ref|XP_002268591.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 2
            isoform X1 [Vitis vinifera]
 emb|CBI22708.3| unnamed protein product, partial [Vitis vinifera]
          Length = 740

 Score =  753 bits (1945), Expect = 0.0
 Identities = 376/501 (75%), Positives = 430/501 (85%), Gaps = 2/501 (0%)
 Frame = +1

Query: 4    LELILILEQYWAQQHLTYPIFFLTNVATSTIDYVKSFLEWMSDSIAKSFEHTRDNAFLLR 183
            LEL+LILEQYW Q HL YPIFFLT VA+STIDYVKSFLEWMSDSIAKSFEHTRDNAFLL+
Sbjct: 243  LELMLILEQYWTQHHLNYPIFFLTYVASSTIDYVKSFLEWMSDSIAKSFEHTRDNAFLLK 302

Query: 184  HVNLIINKSDLEKSPDVPKVVLASMASLEVGSSHDIFVELATEAKNLVLFTEKGQFGTLA 363
            HV L+I+KS+LEK PD PK+VLASMASLE G SHDIFVE AT+AKNLVLF+E+GQF TLA
Sbjct: 303  HVTLLISKSELEKVPDGPKIVLASMASLEAGFSHDIFVEWATDAKNLVLFSERGQFATLA 362

Query: 364  RMLQVDPPPKAVKVAMSKRIPLVGDELKAYXXXXXXXXXXXALKATLSKEEELKASRGVD 543
            RMLQ DPPPKAVKV MSKR+PLVG+EL AY           ALKA+LSKE+E+KASRG D
Sbjct: 363  RMLQADPPPKAVKVTMSKRVPLVGEELAAYEEEQERIKKEEALKASLSKEDEMKASRGSD 422

Query: 544  ANVGDPMVIDATSPRVPSNGNAASSRFGGNRDILIDGFIPPATSVAPMFPFYENSADWDD 723
              +GDPMVID T+P  P++ + A    GG+RDILIDGF+PP+TSVAPMFPFYENS++WDD
Sbjct: 423  NKLGDPMVIDTTTP--PASSDVAVPHVGGHRDILIDGFVPPSTSVAPMFPFYENSSEWDD 480

Query: 724  YGEIINPDDYIIKDEDMDQPSAQGIGGDLAGKLDEGSAHLLLDSTPSKVVPNEMTVQVKC 903
            +GE+INP+DY+IKDEDMDQ + Q +G DL GKLDEG+A L+ D+TPSKV+ NE+TVQVKC
Sbjct: 481  FGEVINPEDYVIKDEDMDQATMQ-VGDDLNGKLDEGAASLIFDTTPSKVISNELTVQVKC 539

Query: 904  ALLYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCSKHVCPHVYAPQIQE 1083
             L+YMDFEGRSDGRSIKSIL+HVAPLKLVLVHGSAEATEHLKQHC KHVCPHVYAPQI E
Sbjct: 540  MLVYMDFEGRSDGRSIKSILSHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYAPQIGE 599

Query: 1084 TIDVTSDLCAYKVQLSEKLMSNVLLKKLGEYEIAWVDAEVGKS-NDXXXXXXXXXXXXAH 1260
            TIDVTSDLCAYKVQLSEKLMSNVL KKLG+YE+AWVDAEVGK+ +             +H
Sbjct: 600  TIDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEVAWVDAEVGKTESGSLSLLPLSTPPPSH 659

Query: 1261 DSVLVGDLKLADFKQFLASKGIQVEFAGGALRCGEYVTLRKVSDSSQKGGTG-TQQVLIE 1437
            D+V VGD+K+ADFKQFLASKGIQVEF+GGALRCGEYVTLRKV D+SQKGG    QQ+++E
Sbjct: 660  DTVFVGDIKMADFKQFLASKGIQVEFSGGALRCGEYVTLRKVGDASQKGGGAIIQQIVME 719

Query: 1438 GPLTEEYYKIRDLLYSQFYLL 1500
            GPL +EYYKIR+ LYSQ+YLL
Sbjct: 720  GPLCDEYYKIREYLYSQYYLL 740


>gb|KQK02330.1| hypothetical protein BRADI_2g00840v3 [Brachypodium distachyon]
          Length = 673

 Score =  750 bits (1936), Expect = 0.0
 Identities = 374/499 (74%), Positives = 424/499 (84%)
 Frame = +1

Query: 4    LELILILEQYWAQQHLTYPIFFLTNVATSTIDYVKSFLEWMSDSIAKSFEHTRDNAFLLR 183
            LEL+LI+EQYWAQ+HL YPI+FLTNV+TST+DYVKSFLEWMSDSI+KSFEHTRDNAFLLR
Sbjct: 178  LELLLIMEQYWAQRHLVYPIYFLTNVSTSTVDYVKSFLEWMSDSISKSFEHTRDNAFLLR 237

Query: 184  HVNLIINKSDLEKSPDVPKVVLASMASLEVGSSHDIFVELATEAKNLVLFTEKGQFGTLA 363
            +V+LIINK +LEK  D PKVVLASMASLEVG SHDIFVE+A EAKNLVLFTEKGQFGTLA
Sbjct: 238  YVSLIINKEELEKLGDAPKVVLASMASLEVGFSHDIFVEMANEAKNLVLFTEKGQFGTLA 297

Query: 364  RMLQVDPPPKAVKVAMSKRIPLVGDELKAYXXXXXXXXXXXALKATLSKEEELKASRGVD 543
            RMLQVDPPPKAVKV M KRIPLVGDELKAY            LKA+LSK+EELKAS G +
Sbjct: 298  RMLQVDPPPKAVKVTMGKRIPLVGDELKAYEEEQERIKKEELLKASLSKDEELKASHGSN 357

Query: 544  ANVGDPMVIDATSPRVPSNGNAASSRFGGNRDILIDGFIPPATSVAPMFPFYENSADWDD 723
            A   DPMV+DA+S R  SN   A S  GGN DILIDGF+P  TS APMFPF+EN+ADWDD
Sbjct: 358  AKASDPMVVDASSSRKSSN---AGSHVGGNVDILIDGFVPSTTSFAPMFPFFENTADWDD 414

Query: 724  YGEIINPDDYIIKDEDMDQPSAQGIGGDLAGKLDEGSAHLLLDSTPSKVVPNEMTVQVKC 903
            +GE+INPDDY++K ++MD     G G  + GKLDEGSA LLLDS PSKV+ NEMTVQVKC
Sbjct: 415  FGEVINPDDYMMKQDEMDNNMMLGAGDGMDGKLDEGSARLLLDSAPSKVISNEMTVQVKC 474

Query: 904  ALLYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCSKHVCPHVYAPQIQE 1083
            +L YMDFEGRSDGRS+KS++AHVAPLKLVLVHGSAEATEHLK HC+K+   HVYAPQI+E
Sbjct: 475  SLAYMDFEGRSDGRSVKSVIAHVAPLKLVLVHGSAEATEHLKMHCAKNSDLHVYAPQIEE 534

Query: 1084 TIDVTSDLCAYKVQLSEKLMSNVLLKKLGEYEIAWVDAEVGKSNDXXXXXXXXXXXXAHD 1263
            TIDVTSDLCAYKVQLSEKLMSNV+ KKLGE+EIAWVDAEVGK ++            AH 
Sbjct: 535  TIDVTSDLCAYKVQLSEKLMSNVISKKLGEHEIAWVDAEVGKVDEKLNLLPPSSTPSAHK 594

Query: 1264 SVLVGDLKLADFKQFLASKGIQVEFAGGALRCGEYVTLRKVSDSSQKGGTGTQQVLIEGP 1443
            SVLVGDLKLADFKQFLA+KG+QVEFAGGALRCGEY+T+RK+ DS+QKG TG+QQ++IEGP
Sbjct: 595  SVLVGDLKLADFKQFLANKGLQVEFAGGALRCGEYITVRKIGDSNQKGSTGSQQIVIEGP 654

Query: 1444 LTEEYYKIRDLLYSQFYLL 1500
            L E+YYKIR+LLYSQF+LL
Sbjct: 655  LCEDYYKIRELLYSQFFLL 673


>gb|PNT69812.1| hypothetical protein BRADI_2g00840v3 [Brachypodium distachyon]
          Length = 674

 Score =  750 bits (1936), Expect = 0.0
 Identities = 374/499 (74%), Positives = 424/499 (84%)
 Frame = +1

Query: 4    LELILILEQYWAQQHLTYPIFFLTNVATSTIDYVKSFLEWMSDSIAKSFEHTRDNAFLLR 183
            LEL+LI+EQYWAQ+HL YPI+FLTNV+TST+DYVKSFLEWMSDSI+KSFEHTRDNAFLLR
Sbjct: 179  LELLLIMEQYWAQRHLVYPIYFLTNVSTSTVDYVKSFLEWMSDSISKSFEHTRDNAFLLR 238

Query: 184  HVNLIINKSDLEKSPDVPKVVLASMASLEVGSSHDIFVELATEAKNLVLFTEKGQFGTLA 363
            +V+LIINK +LEK  D PKVVLASMASLEVG SHDIFVE+A EAKNLVLFTEKGQFGTLA
Sbjct: 239  YVSLIINKEELEKLGDAPKVVLASMASLEVGFSHDIFVEMANEAKNLVLFTEKGQFGTLA 298

Query: 364  RMLQVDPPPKAVKVAMSKRIPLVGDELKAYXXXXXXXXXXXALKATLSKEEELKASRGVD 543
            RMLQVDPPPKAVKV M KRIPLVGDELKAY            LKA+LSK+EELKAS G +
Sbjct: 299  RMLQVDPPPKAVKVTMGKRIPLVGDELKAYEEEQERIKKEELLKASLSKDEELKASHGSN 358

Query: 544  ANVGDPMVIDATSPRVPSNGNAASSRFGGNRDILIDGFIPPATSVAPMFPFYENSADWDD 723
            A   DPMV+DA+S R  SN   A S  GGN DILIDGF+P  TS APMFPF+EN+ADWDD
Sbjct: 359  AKASDPMVVDASSSRKSSN---AGSHVGGNVDILIDGFVPSTTSFAPMFPFFENTADWDD 415

Query: 724  YGEIINPDDYIIKDEDMDQPSAQGIGGDLAGKLDEGSAHLLLDSTPSKVVPNEMTVQVKC 903
            +GE+INPDDY++K ++MD     G G  + GKLDEGSA LLLDS PSKV+ NEMTVQVKC
Sbjct: 416  FGEVINPDDYMMKQDEMDNNMMLGAGDGMDGKLDEGSARLLLDSAPSKVISNEMTVQVKC 475

Query: 904  ALLYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCSKHVCPHVYAPQIQE 1083
            +L YMDFEGRSDGRS+KS++AHVAPLKLVLVHGSAEATEHLK HC+K+   HVYAPQI+E
Sbjct: 476  SLAYMDFEGRSDGRSVKSVIAHVAPLKLVLVHGSAEATEHLKMHCAKNSDLHVYAPQIEE 535

Query: 1084 TIDVTSDLCAYKVQLSEKLMSNVLLKKLGEYEIAWVDAEVGKSNDXXXXXXXXXXXXAHD 1263
            TIDVTSDLCAYKVQLSEKLMSNV+ KKLGE+EIAWVDAEVGK ++            AH 
Sbjct: 536  TIDVTSDLCAYKVQLSEKLMSNVISKKLGEHEIAWVDAEVGKVDEKLNLLPPSSTPSAHK 595

Query: 1264 SVLVGDLKLADFKQFLASKGIQVEFAGGALRCGEYVTLRKVSDSSQKGGTGTQQVLIEGP 1443
            SVLVGDLKLADFKQFLA+KG+QVEFAGGALRCGEY+T+RK+ DS+QKG TG+QQ++IEGP
Sbjct: 596  SVLVGDLKLADFKQFLANKGLQVEFAGGALRCGEYITVRKIGDSNQKGSTGSQQIVIEGP 655

Query: 1444 LTEEYYKIRDLLYSQFYLL 1500
            L E+YYKIR+LLYSQF+LL
Sbjct: 656  LCEDYYKIRELLYSQFFLL 674


>ref|XP_010255376.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 2
            [Nelumbo nucifera]
          Length = 739

 Score =  752 bits (1942), Expect = 0.0
 Identities = 383/501 (76%), Positives = 428/501 (85%), Gaps = 2/501 (0%)
 Frame = +1

Query: 4    LELILILEQYWAQQHLTYPIFFLTNVATSTIDYVKSFLEWMSDSIAKSFEHTRDNAFLLR 183
            LEL+LILEQ+WAQ HL YPIFFLT V++STIDYVKSFLEWMSDSIAKSFEHTRDNAFLL+
Sbjct: 243  LELLLILEQHWAQHHLNYPIFFLTYVSSSTIDYVKSFLEWMSDSIAKSFEHTRDNAFLLK 302

Query: 184  HVNLIINKSDLEKSPDVPKVVLASMASLEVGSSHDIFVELATEAKNLVLFTEKGQFGTLA 363
            HV L+INKS+LEK PD PK+VL SMASLEVG SHDIFVE A++AKNLVLFTE+GQF TLA
Sbjct: 303  HVTLLINKSELEKVPDGPKIVLVSMASLEVGFSHDIFVEWASDAKNLVLFTERGQFATLA 362

Query: 364  RMLQVDPPPKAVKVAMSKRIPLVGDELKAYXXXXXXXXXXXALKATLSKEEELKASRGVD 543
            RMLQ DPPPKAVKV M KR+PLVG+EL+AY           ALKA+ SKEE+LKAS G D
Sbjct: 363  RMLQADPPPKAVKVTMCKRVPLVGEELRAY-EEEQNRIKKEALKASQSKEEDLKASHGSD 421

Query: 544  ANVGDPMVIDATSPRVPSNGNAASSRFGGNRDILIDGFIPPATSVAPMFPFYENSADWDD 723
            AN+GDPMVIDA +    S+ +       G RDILIDGF+P +TSVAPMFPF+ENSA+WDD
Sbjct: 422  ANLGDPMVIDAINAH--SSSDVTGPHGSGQRDILIDGFVPLSTSVAPMFPFFENSAEWDD 479

Query: 724  YGEIINPDDYIIKDEDMDQPSAQGIGGDLAGKLDEGSAHLLLDSTPSKVVPNEMTVQVKC 903
            +GE+INPDDY+IK+EDMDQ +   + GDL GKLDE +A+L+LDS PSKV+ NE+TVQVKC
Sbjct: 480  FGEVINPDDYVIKEEDMDQ-TFMHVSGDLDGKLDESAANLILDSKPSKVISNELTVQVKC 538

Query: 904  ALLYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCSKHVCPHVYAPQIQE 1083
            +L+YMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHC KHVCPHVYAPQI E
Sbjct: 539  SLIYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYAPQIGE 598

Query: 1084 TIDVTSDLCAYKVQLSEKLMSNVLLKKLGEYEIAWVDAEVGKS-NDXXXXXXXXXXXXAH 1260
            TIDVTSDLCAYKVQLSEKLMSNVL KKLG+YEIAW+DA+VGK+ ND             H
Sbjct: 599  TIDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWLDAQVGKTDNDMLSLLPLSTPPPPH 658

Query: 1261 DSVLVGDLKLADFKQFLASKGIQVEFAGGALRCGEYVTLRKVSDSSQK-GGTGTQQVLIE 1437
             SVLVGDLKLADFKQFLASKG+QVEFAGGALRCGEYVTLRKV D+ QK GGTGTQQV++E
Sbjct: 659  KSVLVGDLKLADFKQFLASKGVQVEFAGGALRCGEYVTLRKVGDAGQKGGGTGTQQVVLE 718

Query: 1438 GPLTEEYYKIRDLLYSQFYLL 1500
            GPLTEEYYKIRD LYSQFYLL
Sbjct: 719  GPLTEEYYKIRDYLYSQFYLL 739


>ref|XP_015611669.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 2
            [Oryza sativa Japonica Group]
 sp|Q652P4.1|CPSF2_ORYSJ RecName: Full=Cleavage and polyadenylation specificity factor subunit
            2; AltName: Full=Cleavage and polyadenylation specificity
            factor 100 kDa subunit; Short=CPSF 100 kDa subunit
 dbj|BAD46223.1| putative cleavage and polyadenylation specificity factor [Oryza
            sativa Japonica Group]
 dbj|BAF25892.1| Os09g0569400 [Oryza sativa Japonica Group]
 dbj|BAT09500.1| Os09g0569400 [Oryza sativa Japonica Group]
          Length = 738

 Score =  751 bits (1940), Expect = 0.0
 Identities = 374/499 (74%), Positives = 427/499 (85%)
 Frame = +1

Query: 4    LELILILEQYWAQQHLTYPIFFLTNVATSTIDYVKSFLEWMSDSIAKSFEHTRDNAFLLR 183
            LE++LILEQYWAQ+HL YPI+FLTNV+TST+DYVKSFLEWM+DSI+KSFEHTRDNAFLL+
Sbjct: 243  LEILLILEQYWAQRHLIYPIYFLTNVSTSTVDYVKSFLEWMNDSISKSFEHTRDNAFLLK 302

Query: 184  HVNLIINKSDLEKSPDVPKVVLASMASLEVGSSHDIFVELATEAKNLVLFTEKGQFGTLA 363
             V  IINK +LEK  D PKVVLASMASLEVG SHDIFV++A EAKNLVLFTEKGQFGTLA
Sbjct: 303  CVTQIINKDELEKLGDAPKVVLASMASLEVGFSHDIFVDMANEAKNLVLFTEKGQFGTLA 362

Query: 364  RMLQVDPPPKAVKVAMSKRIPLVGDELKAYXXXXXXXXXXXALKATLSKEEELKASRGVD 543
            RMLQVDPPPKAVKV MSKRIPLVGDELKAY           ALKA+L+KEEE KAS G +
Sbjct: 363  RMLQVDPPPKAVKVTMSKRIPLVGDELKAYEEEQERIKKEEALKASLNKEEEKKASLGSN 422

Query: 544  ANVGDPMVIDATSPRVPSNGNAASSRFGGNRDILIDGFIPPATSVAPMFPFYENSADWDD 723
            A   DPMVIDA++ R PSN   A S+FGGN DILIDGF+PP++SVAPMFPF+EN+++WDD
Sbjct: 423  AKASDPMVIDASTSRKPSN---AGSKFGGNVDILIDGFVPPSSSVAPMFPFFENTSEWDD 479

Query: 724  YGEIINPDDYIIKDEDMDQPSAQGIGGDLAGKLDEGSAHLLLDSTPSKVVPNEMTVQVKC 903
            +GE+INP+DY++K E+MD     G G  +   LDEGSA LLLDSTPSKV+ NEMTVQVKC
Sbjct: 480  FGEVINPEDYLMKQEEMDNTLMPGAGDGMDSMLDEGSARLLLDSTPSKVISNEMTVQVKC 539

Query: 904  ALLYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCSKHVCPHVYAPQIQE 1083
            +L YMDFEGRSDGRS+KS++AHVAPLKLVLVHGSAEATEHLK HCSK+   HVYAPQI+E
Sbjct: 540  SLAYMDFEGRSDGRSVKSVIAHVAPLKLVLVHGSAEATEHLKMHCSKNSDLHVYAPQIEE 599

Query: 1084 TIDVTSDLCAYKVQLSEKLMSNVLLKKLGEYEIAWVDAEVGKSNDXXXXXXXXXXXXAHD 1263
            TIDVTSDLCAYKVQLSEKLMSNV+ KKLGE+EIAWVDAEVGK++D            AH 
Sbjct: 600  TIDVTSDLCAYKVQLSEKLMSNVISKKLGEHEIAWVDAEVGKTDDKLTLLPPSSTPAAHK 659

Query: 1264 SVLVGDLKLADFKQFLASKGIQVEFAGGALRCGEYVTLRKVSDSSQKGGTGTQQVLIEGP 1443
            SVLVGDLKLADFKQFLA+KG+QVEFAGGALRCGEY+TLRK+ D+ QKG TG+QQ++IEGP
Sbjct: 660  SVLVGDLKLADFKQFLANKGLQVEFAGGALRCGEYITLRKIGDAGQKGSTGSQQIVIEGP 719

Query: 1444 LTEEYYKIRDLLYSQFYLL 1500
            L E+YYKIR+LLYSQFYLL
Sbjct: 720  LCEDYYKIRELLYSQFYLL 738


>ref|XP_003565596.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 2
            isoform X2 [Brachypodium distachyon]
 gb|KQK02328.1| hypothetical protein BRADI_2g00840v3 [Brachypodium distachyon]
          Length = 738

 Score =  750 bits (1936), Expect = 0.0
 Identities = 374/499 (74%), Positives = 424/499 (84%)
 Frame = +1

Query: 4    LELILILEQYWAQQHLTYPIFFLTNVATSTIDYVKSFLEWMSDSIAKSFEHTRDNAFLLR 183
            LEL+LI+EQYWAQ+HL YPI+FLTNV+TST+DYVKSFLEWMSDSI+KSFEHTRDNAFLLR
Sbjct: 243  LELLLIMEQYWAQRHLVYPIYFLTNVSTSTVDYVKSFLEWMSDSISKSFEHTRDNAFLLR 302

Query: 184  HVNLIINKSDLEKSPDVPKVVLASMASLEVGSSHDIFVELATEAKNLVLFTEKGQFGTLA 363
            +V+LIINK +LEK  D PKVVLASMASLEVG SHDIFVE+A EAKNLVLFTEKGQFGTLA
Sbjct: 303  YVSLIINKEELEKLGDAPKVVLASMASLEVGFSHDIFVEMANEAKNLVLFTEKGQFGTLA 362

Query: 364  RMLQVDPPPKAVKVAMSKRIPLVGDELKAYXXXXXXXXXXXALKATLSKEEELKASRGVD 543
            RMLQVDPPPKAVKV M KRIPLVGDELKAY            LKA+LSK+EELKAS G +
Sbjct: 363  RMLQVDPPPKAVKVTMGKRIPLVGDELKAYEEEQERIKKEELLKASLSKDEELKASHGSN 422

Query: 544  ANVGDPMVIDATSPRVPSNGNAASSRFGGNRDILIDGFIPPATSVAPMFPFYENSADWDD 723
            A   DPMV+DA+S R  SN   A S  GGN DILIDGF+P  TS APMFPF+EN+ADWDD
Sbjct: 423  AKASDPMVVDASSSRKSSN---AGSHVGGNVDILIDGFVPSTTSFAPMFPFFENTADWDD 479

Query: 724  YGEIINPDDYIIKDEDMDQPSAQGIGGDLAGKLDEGSAHLLLDSTPSKVVPNEMTVQVKC 903
            +GE+INPDDY++K ++MD     G G  + GKLDEGSA LLLDS PSKV+ NEMTVQVKC
Sbjct: 480  FGEVINPDDYMMKQDEMDNNMMLGAGDGMDGKLDEGSARLLLDSAPSKVISNEMTVQVKC 539

Query: 904  ALLYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCSKHVCPHVYAPQIQE 1083
            +L YMDFEGRSDGRS+KS++AHVAPLKLVLVHGSAEATEHLK HC+K+   HVYAPQI+E
Sbjct: 540  SLAYMDFEGRSDGRSVKSVIAHVAPLKLVLVHGSAEATEHLKMHCAKNSDLHVYAPQIEE 599

Query: 1084 TIDVTSDLCAYKVQLSEKLMSNVLLKKLGEYEIAWVDAEVGKSNDXXXXXXXXXXXXAHD 1263
            TIDVTSDLCAYKVQLSEKLMSNV+ KKLGE+EIAWVDAEVGK ++            AH 
Sbjct: 600  TIDVTSDLCAYKVQLSEKLMSNVISKKLGEHEIAWVDAEVGKVDEKLNLLPPSSTPSAHK 659

Query: 1264 SVLVGDLKLADFKQFLASKGIQVEFAGGALRCGEYVTLRKVSDSSQKGGTGTQQVLIEGP 1443
            SVLVGDLKLADFKQFLA+KG+QVEFAGGALRCGEY+T+RK+ DS+QKG TG+QQ++IEGP
Sbjct: 660  SVLVGDLKLADFKQFLANKGLQVEFAGGALRCGEYITVRKIGDSNQKGSTGSQQIVIEGP 719

Query: 1444 LTEEYYKIRDLLYSQFYLL 1500
            L E+YYKIR+LLYSQF+LL
Sbjct: 720  LCEDYYKIRELLYSQFFLL 738


>ref|XP_010230345.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 2
            isoform X1 [Brachypodium distachyon]
 gb|PNT69813.1| hypothetical protein BRADI_2g00840v3 [Brachypodium distachyon]
          Length = 739

 Score =  750 bits (1936), Expect = 0.0
 Identities = 374/499 (74%), Positives = 424/499 (84%)
 Frame = +1

Query: 4    LELILILEQYWAQQHLTYPIFFLTNVATSTIDYVKSFLEWMSDSIAKSFEHTRDNAFLLR 183
            LEL+LI+EQYWAQ+HL YPI+FLTNV+TST+DYVKSFLEWMSDSI+KSFEHTRDNAFLLR
Sbjct: 244  LELLLIMEQYWAQRHLVYPIYFLTNVSTSTVDYVKSFLEWMSDSISKSFEHTRDNAFLLR 303

Query: 184  HVNLIINKSDLEKSPDVPKVVLASMASLEVGSSHDIFVELATEAKNLVLFTEKGQFGTLA 363
            +V+LIINK +LEK  D PKVVLASMASLEVG SHDIFVE+A EAKNLVLFTEKGQFGTLA
Sbjct: 304  YVSLIINKEELEKLGDAPKVVLASMASLEVGFSHDIFVEMANEAKNLVLFTEKGQFGTLA 363

Query: 364  RMLQVDPPPKAVKVAMSKRIPLVGDELKAYXXXXXXXXXXXALKATLSKEEELKASRGVD 543
            RMLQVDPPPKAVKV M KRIPLVGDELKAY            LKA+LSK+EELKAS G +
Sbjct: 364  RMLQVDPPPKAVKVTMGKRIPLVGDELKAYEEEQERIKKEELLKASLSKDEELKASHGSN 423

Query: 544  ANVGDPMVIDATSPRVPSNGNAASSRFGGNRDILIDGFIPPATSVAPMFPFYENSADWDD 723
            A   DPMV+DA+S R  SN   A S  GGN DILIDGF+P  TS APMFPF+EN+ADWDD
Sbjct: 424  AKASDPMVVDASSSRKSSN---AGSHVGGNVDILIDGFVPSTTSFAPMFPFFENTADWDD 480

Query: 724  YGEIINPDDYIIKDEDMDQPSAQGIGGDLAGKLDEGSAHLLLDSTPSKVVPNEMTVQVKC 903
            +GE+INPDDY++K ++MD     G G  + GKLDEGSA LLLDS PSKV+ NEMTVQVKC
Sbjct: 481  FGEVINPDDYMMKQDEMDNNMMLGAGDGMDGKLDEGSARLLLDSAPSKVISNEMTVQVKC 540

Query: 904  ALLYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCSKHVCPHVYAPQIQE 1083
            +L YMDFEGRSDGRS+KS++AHVAPLKLVLVHGSAEATEHLK HC+K+   HVYAPQI+E
Sbjct: 541  SLAYMDFEGRSDGRSVKSVIAHVAPLKLVLVHGSAEATEHLKMHCAKNSDLHVYAPQIEE 600

Query: 1084 TIDVTSDLCAYKVQLSEKLMSNVLLKKLGEYEIAWVDAEVGKSNDXXXXXXXXXXXXAHD 1263
            TIDVTSDLCAYKVQLSEKLMSNV+ KKLGE+EIAWVDAEVGK ++            AH 
Sbjct: 601  TIDVTSDLCAYKVQLSEKLMSNVISKKLGEHEIAWVDAEVGKVDEKLNLLPPSSTPSAHK 660

Query: 1264 SVLVGDLKLADFKQFLASKGIQVEFAGGALRCGEYVTLRKVSDSSQKGGTGTQQVLIEGP 1443
            SVLVGDLKLADFKQFLA+KG+QVEFAGGALRCGEY+T+RK+ DS+QKG TG+QQ++IEGP
Sbjct: 661  SVLVGDLKLADFKQFLANKGLQVEFAGGALRCGEYITVRKIGDSNQKGSTGSQQIVIEGP 720

Query: 1444 LTEEYYKIRDLLYSQFYLL 1500
            L E+YYKIR+LLYSQF+LL
Sbjct: 721  LCEDYYKIRELLYSQFFLL 739


>ref|XP_003578687.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            2-like isoform X2 [Brachypodium distachyon]
 gb|KQJ91611.1| hypothetical protein BRADI_4g38660v3 [Brachypodium distachyon]
          Length = 738

 Score =  749 bits (1934), Expect = 0.0
 Identities = 374/499 (74%), Positives = 425/499 (85%)
 Frame = +1

Query: 4    LELILILEQYWAQQHLTYPIFFLTNVATSTIDYVKSFLEWMSDSIAKSFEHTRDNAFLLR 183
            LEL+LI+EQYWAQ+HL YPI+FLTNV+TST+DYVKSFLEWMSDSI+KSFEHTRDNAFLLR
Sbjct: 243  LELLLIMEQYWAQRHLVYPIYFLTNVSTSTVDYVKSFLEWMSDSISKSFEHTRDNAFLLR 302

Query: 184  HVNLIINKSDLEKSPDVPKVVLASMASLEVGSSHDIFVELATEAKNLVLFTEKGQFGTLA 363
            +V+LIINK +LEK  D PKVVLASMASLEVG SHDIFVE+A EAKNLVLFTEKGQFGTLA
Sbjct: 303  YVSLIINKEELEKLGDAPKVVLASMASLEVGFSHDIFVEMANEAKNLVLFTEKGQFGTLA 362

Query: 364  RMLQVDPPPKAVKVAMSKRIPLVGDELKAYXXXXXXXXXXXALKATLSKEEELKASRGVD 543
            RMLQVDPPPKAVKV M KRIPLVGDELKAY            LKA+LSK+EELKAS G +
Sbjct: 363  RMLQVDPPPKAVKVTMGKRIPLVGDELKAYEEEQERIKKEELLKASLSKDEELKASHGSN 422

Query: 544  ANVGDPMVIDATSPRVPSNGNAASSRFGGNRDILIDGFIPPATSVAPMFPFYENSADWDD 723
            A   DPMV+DA+S R  SN   A S  GGN DILIDGF+P  TSVAPMFPF+EN+ADWDD
Sbjct: 423  AKASDPMVVDASSSRKSSN---AGSHVGGNVDILIDGFVPSTTSVAPMFPFFENTADWDD 479

Query: 724  YGEIINPDDYIIKDEDMDQPSAQGIGGDLAGKLDEGSAHLLLDSTPSKVVPNEMTVQVKC 903
            +GE+INPDDY++K ++MD     G G  + GKLDEGSA LLLDS PSKV+ NEMTVQVKC
Sbjct: 480  FGEVINPDDYMMKQDEMDNNMMLGAGDGMDGKLDEGSARLLLDSAPSKVISNEMTVQVKC 539

Query: 904  ALLYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCSKHVCPHVYAPQIQE 1083
            +L+YMDFEGRSDGRS+KS++AHVAPLKLVLVHGSAEATEHLK HC+K+   HVYAPQI+E
Sbjct: 540  SLVYMDFEGRSDGRSVKSVIAHVAPLKLVLVHGSAEATEHLKMHCAKNSDLHVYAPQIEE 599

Query: 1084 TIDVTSDLCAYKVQLSEKLMSNVLLKKLGEYEIAWVDAEVGKSNDXXXXXXXXXXXXAHD 1263
            TIDVTSDLCAYKVQLSEKLMSNV+ KKLGE+EIAWVDAEVGK ++            AH 
Sbjct: 600  TIDVTSDLCAYKVQLSEKLMSNVISKKLGEHEIAWVDAEVGKVDEKLNLLPPSSTPSAHK 659

Query: 1264 SVLVGDLKLADFKQFLASKGIQVEFAGGALRCGEYVTLRKVSDSSQKGGTGTQQVLIEGP 1443
            SVLVGDLKLADFKQFLA+KG+QVEFAGGALRCGEY+T+RK+ DS+QKG T +QQ++IEGP
Sbjct: 660  SVLVGDLKLADFKQFLANKGLQVEFAGGALRCGEYITVRKIGDSNQKGSTVSQQIVIEGP 719

Query: 1444 LTEEYYKIRDLLYSQFYLL 1500
            L E+YYKIR+LLYSQF+LL
Sbjct: 720  LCEDYYKIRELLYSQFFLL 738


>ref|XP_010238537.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            2-like isoform X1 [Brachypodium distachyon]
 gb|KQJ91612.1| hypothetical protein BRADI_4g38660v3 [Brachypodium distachyon]
          Length = 739

 Score =  749 bits (1934), Expect = 0.0
 Identities = 374/499 (74%), Positives = 425/499 (85%)
 Frame = +1

Query: 4    LELILILEQYWAQQHLTYPIFFLTNVATSTIDYVKSFLEWMSDSIAKSFEHTRDNAFLLR 183
            LEL+LI+EQYWAQ+HL YPI+FLTNV+TST+DYVKSFLEWMSDSI+KSFEHTRDNAFLLR
Sbjct: 244  LELLLIMEQYWAQRHLVYPIYFLTNVSTSTVDYVKSFLEWMSDSISKSFEHTRDNAFLLR 303

Query: 184  HVNLIINKSDLEKSPDVPKVVLASMASLEVGSSHDIFVELATEAKNLVLFTEKGQFGTLA 363
            +V+LIINK +LEK  D PKVVLASMASLEVG SHDIFVE+A EAKNLVLFTEKGQFGTLA
Sbjct: 304  YVSLIINKEELEKLGDAPKVVLASMASLEVGFSHDIFVEMANEAKNLVLFTEKGQFGTLA 363

Query: 364  RMLQVDPPPKAVKVAMSKRIPLVGDELKAYXXXXXXXXXXXALKATLSKEEELKASRGVD 543
            RMLQVDPPPKAVKV M KRIPLVGDELKAY            LKA+LSK+EELKAS G +
Sbjct: 364  RMLQVDPPPKAVKVTMGKRIPLVGDELKAYEEEQERIKKEELLKASLSKDEELKASHGSN 423

Query: 544  ANVGDPMVIDATSPRVPSNGNAASSRFGGNRDILIDGFIPPATSVAPMFPFYENSADWDD 723
            A   DPMV+DA+S R  SN   A S  GGN DILIDGF+P  TSVAPMFPF+EN+ADWDD
Sbjct: 424  AKASDPMVVDASSSRKSSN---AGSHVGGNVDILIDGFVPSTTSVAPMFPFFENTADWDD 480

Query: 724  YGEIINPDDYIIKDEDMDQPSAQGIGGDLAGKLDEGSAHLLLDSTPSKVVPNEMTVQVKC 903
            +GE+INPDDY++K ++MD     G G  + GKLDEGSA LLLDS PSKV+ NEMTVQVKC
Sbjct: 481  FGEVINPDDYMMKQDEMDNNMMLGAGDGMDGKLDEGSARLLLDSAPSKVISNEMTVQVKC 540

Query: 904  ALLYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCSKHVCPHVYAPQIQE 1083
            +L+YMDFEGRSDGRS+KS++AHVAPLKLVLVHGSAEATEHLK HC+K+   HVYAPQI+E
Sbjct: 541  SLVYMDFEGRSDGRSVKSVIAHVAPLKLVLVHGSAEATEHLKMHCAKNSDLHVYAPQIEE 600

Query: 1084 TIDVTSDLCAYKVQLSEKLMSNVLLKKLGEYEIAWVDAEVGKSNDXXXXXXXXXXXXAHD 1263
            TIDVTSDLCAYKVQLSEKLMSNV+ KKLGE+EIAWVDAEVGK ++            AH 
Sbjct: 601  TIDVTSDLCAYKVQLSEKLMSNVISKKLGEHEIAWVDAEVGKVDEKLNLLPPSSTPSAHK 660

Query: 1264 SVLVGDLKLADFKQFLASKGIQVEFAGGALRCGEYVTLRKVSDSSQKGGTGTQQVLIEGP 1443
            SVLVGDLKLADFKQFLA+KG+QVEFAGGALRCGEY+T+RK+ DS+QKG T +QQ++IEGP
Sbjct: 661  SVLVGDLKLADFKQFLANKGLQVEFAGGALRCGEYITVRKIGDSNQKGSTVSQQIVIEGP 720

Query: 1444 LTEEYYKIRDLLYSQFYLL 1500
            L E+YYKIR+LLYSQF+LL
Sbjct: 721  LCEDYYKIRELLYSQFFLL 739