BLASTX nr result
ID: Ophiopogon25_contig00008020
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ophiopogon25_contig00008020 (965 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 149,584,005 sequences; 54,822,741,787 total letters Searching..................................................done ***** No hits found ****** Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Mar 24, 2018 3:07 PM Number of letters in database: 54,822,741,787 Number of sequences in database: 149,584,005 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 149584005 Number of Hits to DB: 899,720,831,551,402 Number of extensions: 270047054 Number of successful extensions: -2089498971 Number of sequences better than 1.0e-05: 172569375 Number of HSP's gapped: 1479443014 Number of HSP's successfully gapped: 239410223 Length of query: 321 Length of database: 54,822,741,787 Length adjustment: 155 Effective length of query: 166 Effective length of database: 31,637,221,012 Effective search space: 5251778687992 Effective search space used: 5251778687992 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 33 (17.3 bits)