BLASTX nr result

ID: Ophiopogon25_contig00008020 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00008020
         (965 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done

 ***** No hits found ******


  Database: All non-redundant GenBank CDS
  translations+PDB+SwissProt+PIR+PRF excluding environmental samples
  from WGS projects
    Posted date:  Mar 24, 2018  3:07 PM
  Number of letters in database: 54,822,741,787
  Number of sequences in database:  149,584,005
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 149584005
Number of Hits to DB: 899,720,831,551,402
Number of extensions: 270047054
Number of successful extensions: -2089498971
Number of sequences better than 1.0e-05: 172569375
Number of HSP's gapped: 1479443014
Number of HSP's successfully gapped: 239410223
Length of query: 321
Length of database: 54,822,741,787
Length adjustment: 155
Effective length of query: 166
Effective length of database: 31,637,221,012
Effective search space: 5251778687992
Effective search space used: 5251778687992
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 33 (17.3 bits)

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