BLASTX nr result
ID: Ophiopogon25_contig00007726
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon25_contig00007726
(901 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020250011.1| DNA-directed RNA polymerase II subunit 1 [As... 420 e-131
emb|CDP14969.1| unnamed protein product [Coffea canephora] >gi|6... 380 e-130
ref|XP_021275284.1| DNA-directed RNA polymerase II subunit 1-lik... 384 e-128
gb|PON82669.1| DNA-directed RNA polymerase, subunit beta-prime [... 380 e-127
ref|XP_020585525.1| DNA-directed RNA polymerase II subunit 1 iso... 409 e-127
ref|XP_020585526.1| DNA-directed RNA polymerase II subunit 1 iso... 409 e-127
ref|XP_008806151.1| PREDICTED: DNA-directed RNA polymerase II su... 409 e-127
ref|XP_010935180.1| PREDICTED: DNA-directed RNA polymerase II su... 408 e-127
gb|KVH98536.1| Aspartate decarboxylase-like domain-containing pr... 384 e-126
gb|AIO05697.1| DNA-directed RNA polymerase II subunit 1, partial... 405 e-126
gb|PON49951.1| DNA-directed RNA polymerase, subunit gamma [Paras... 377 e-126
ref|XP_020676053.1| DNA-directed RNA polymerase II subunit 1 [De... 405 e-126
ref|XP_009401403.1| PREDICTED: DNA-directed RNA polymerase II su... 404 e-126
ref|XP_020113244.1| DNA-directed RNA polymerase II subunit 1 [An... 404 e-125
dbj|GAU22666.1| hypothetical protein TSUD_234880 [Trifolium subt... 374 e-125
gb|PKA55713.1| DNA-directed RNA polymerase II subunit RPB1 [Apos... 402 e-125
ref|XP_014660874.1| DNA-directed RNA polymerase II subunit 1 [Se... 385 e-124
ref|XP_010941355.1| PREDICTED: DNA-directed RNA polymerase II su... 399 e-124
gb|PKU64515.1| DNA-directed RNA polymerase II subunit RPB1 [Dend... 394 e-123
gb|KOM28113.1| hypothetical protein LR48_Vigan499s005700 [Vigna ... 377 e-123
>ref|XP_020250011.1| DNA-directed RNA polymerase II subunit 1 [Asparagus officinalis]
gb|ONK55404.1| uncharacterized protein A4U43_UnF3880 [Asparagus officinalis]
Length = 1843
Score = 420 bits (1080), Expect = e-131
Identities = 209/227 (92%), Positives = 211/227 (92%)
Frame = -3
Query: 683 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 504
MDMRFP+SPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKV GLSDPRLGTI
Sbjct: 1 MDMRFPFSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVAGLSDPRLGTI 60
Query: 503 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 324
DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADE+D R
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEDDVR 120
Query: 323 FKQALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXXDEPVKKSRGGCGAQQPNIT 144
FKQALKIRNPKNRLKRIYDACKSKKKCA DEPVKKSRGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKNRLKRIYDACKSKKKCAGGDDIDVQGQQDSDEPVKKSRGGCGAQQPNIT 180
Query: 143 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISD 3
IDGMKMVAEYKA KKKSDDPEQLPEPVERKQQLSAERVLSVLKRISD
Sbjct: 181 IDGMKMVAEYKATKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISD 227
>emb|CDP14969.1| unnamed protein product [Coffea canephora]
emb|CDP01841.1| unnamed protein product [Coffea canephora]
Length = 295
Score = 380 bits (975), Expect = e-130
Identities = 185/227 (81%), Positives = 201/227 (88%)
Frame = -3
Query: 683 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 504
MD+RFPYSPAEVAKVR VQFGILSPDEIRQMSVV +EH ET ERGKPK+GGLSDPRLGTI
Sbjct: 1 MDVRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 60
Query: 503 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 324
DRKMKCETC A+MAECPGHFGHLELAKPMFHIGF+KTVL+IMRCVCFNCSKILADEED +
Sbjct: 61 DRKMKCETCMASMAECPGHFGHLELAKPMFHIGFIKTVLSIMRCVCFNCSKILADEEDPK 120
Query: 323 FKQALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXXDEPVKKSRGGCGAQQPNIT 144
FKQAL+IRNPKNRLK+I DACK+K KC +EPVKK+RGGCGAQQP +T
Sbjct: 121 FKQALRIRNPKNRLKKILDACKNKSKC-EGGDEIDVQGQDSEEPVKKTRGGCGAQQPKLT 179
Query: 143 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISD 3
IDGMKMVAEYK KKK+DD EQLPEPVERKQQLSAE+VLS+LKRISD
Sbjct: 180 IDGMKMVAEYKVQKKKNDDQEQLPEPVERKQQLSAEKVLSILKRISD 226
>ref|XP_021275284.1| DNA-directed RNA polymerase II subunit 1-like [Herrania umbratica]
Length = 545
Score = 384 bits (987), Expect = e-128
Identities = 188/227 (82%), Positives = 203/227 (89%)
Frame = -3
Query: 683 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 504
MD+RFPYSPAEVAKVR VQFGILSPDEIRQMSVVQ+EHGET ERGKPKVGGLSDPRLGTI
Sbjct: 1 MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI 60
Query: 503 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 324
DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVL+IMRCVCFNCSKILADEED +
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 323 FKQALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXXDEPVKKSRGGCGAQQPNIT 144
FKQALKI+NPKNRLK+I DACK+K KC +EPVKKSRGGCGAQQP ++
Sbjct: 121 FKQALKIKNPKNRLKKILDACKNKSKC-EGGDEIDVQGQDTEEPVKKSRGGCGAQQPKLS 179
Query: 143 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISD 3
IDGMKM+AEYK +K++DD EQLPEPVERKQ L+AERVLSVLKRISD
Sbjct: 180 IDGMKMIAEYKPQRKRNDDQEQLPEPVERKQTLTAERVLSVLKRISD 226
>gb|PON82669.1| DNA-directed RNA polymerase, subunit beta-prime [Trema orientalis]
Length = 460
Score = 380 bits (977), Expect = e-127
Identities = 187/227 (82%), Positives = 202/227 (88%)
Frame = -3
Query: 683 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 504
MD+RFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQ+EHGETM GKPKV GLSDPRLGTI
Sbjct: 1 MDIRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQIEHGETMMGGKPKVAGLSDPRLGTI 60
Query: 503 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 324
DRKMKCETCTANMAECPGHFGHLELAKPMFHIGF+KTVL+IMRCVCFNCSKIL DEED +
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILVDEEDHK 120
Query: 323 FKQALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXXDEPVKKSRGGCGAQQPNIT 144
FKQALKIRNPKNRLK+I DACK+K KC +EPVKKSRGGCGAQQP +T
Sbjct: 121 FKQALKIRNPKNRLKKILDACKNKTKC-EGGDEIDVQGQESEEPVKKSRGGCGAQQPKLT 179
Query: 143 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISD 3
IDGMK++AEYK+ +KKSD+ EQLPEPVERKQ L+AERVLSVLKRISD
Sbjct: 180 IDGMKIIAEYKSQRKKSDEQEQLPEPVERKQTLTAERVLSVLKRISD 226
>ref|XP_020585525.1| DNA-directed RNA polymerase II subunit 1 isoform X1 [Phalaenopsis
equestris]
Length = 1827
Score = 409 bits (1052), Expect = e-127
Identities = 203/227 (89%), Positives = 207/227 (91%)
Frame = -3
Query: 683 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 504
MD+RFPYSPAEVAKVR VQFGILSPDEIRQMSV Q+EHGETMERGKPK GGLSDPRLGTI
Sbjct: 1 MDIRFPYSPAEVAKVRCVQFGILSPDEIRQMSVAQIEHGETMERGKPKPGGLSDPRLGTI 60
Query: 503 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 324
DRKMKCETC ANMAEC GHFGHLELAKPMFHIGF+KTVLAIMRCVCFNCSKILADEEDAR
Sbjct: 61 DRKMKCETCMANMAECSGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEEDAR 120
Query: 323 FKQALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXXDEPVKKSRGGCGAQQPNIT 144
FKQALKIRNPKNRLKRIYDACKSKKKCA +EPVKKSRGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKNRLKRIYDACKSKKKCAGGDDIDLQSQQDSEEPVKKSRGGCGAQQPNIT 180
Query: 143 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISD 3
IDGMKMVAEYKAPKKKSDD EQLPEPVERKQ LSAERVLSVLKRISD
Sbjct: 181 IDGMKMVAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLKRISD 227
>ref|XP_020585526.1| DNA-directed RNA polymerase II subunit 1 isoform X2 [Phalaenopsis
equestris]
Length = 1827
Score = 409 bits (1052), Expect = e-127
Identities = 203/227 (89%), Positives = 207/227 (91%)
Frame = -3
Query: 683 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 504
MD+RFPYSPAEVAKVR VQFGILSPDEIRQMSV Q+EHGETMERGKPK GGLSDPRLGTI
Sbjct: 1 MDIRFPYSPAEVAKVRCVQFGILSPDEIRQMSVAQIEHGETMERGKPKPGGLSDPRLGTI 60
Query: 503 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 324
DRKMKCETC ANMAEC GHFGHLELAKPMFHIGF+KTVLAIMRCVCFNCSKILADEEDAR
Sbjct: 61 DRKMKCETCMANMAECSGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEEDAR 120
Query: 323 FKQALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXXDEPVKKSRGGCGAQQPNIT 144
FKQALKIRNPKNRLKRIYDACKSKKKCA +EPVKKSRGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKNRLKRIYDACKSKKKCAGGDDIDLQSQQDSEEPVKKSRGGCGAQQPNIT 180
Query: 143 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISD 3
IDGMKMVAEYKAPKKKSDD EQLPEPVERKQ LSAERVLSVLKRISD
Sbjct: 181 IDGMKMVAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLKRISD 227
>ref|XP_008806151.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Phoenix
dactylifera]
Length = 1842
Score = 409 bits (1051), Expect = e-127
Identities = 200/227 (88%), Positives = 208/227 (91%)
Frame = -3
Query: 683 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 504
MDMRFPYSPAEVAKVR VQFGILSPDEIRQMSVVQ+EHGETMERGKPK GGLSDPRLGTI
Sbjct: 1 MDMRFPYSPAEVAKVRCVQFGILSPDEIRQMSVVQIEHGETMERGKPKPGGLSDPRLGTI 60
Query: 503 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 324
DRKMKCETC ANMAECPGHFGHLELAKPMFHIGF+KTVLAIMRCVCFNCSKILADE+D R
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDTR 120
Query: 323 FKQALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXXDEPVKKSRGGCGAQQPNIT 144
FKQALKIRNPK+RLKRIYDACK+KKKCA +EP+KKSRGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKHRLKRIYDACKTKKKCAGGDDIDVQAQQDSEEPIKKSRGGCGAQQPNIT 180
Query: 143 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISD 3
IDGMKM+AEYKAPKKKSDD EQLPEPVERKQ LSAERVLSVLKRISD
Sbjct: 181 IDGMKMIAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLKRISD 227
>ref|XP_010935180.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Elaeis
guineensis]
Length = 1842
Score = 408 bits (1049), Expect = e-127
Identities = 200/227 (88%), Positives = 208/227 (91%)
Frame = -3
Query: 683 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 504
MDMRFPYSPAEVAKVR VQFGILSPDEIRQMSVVQ+EH ETMERGKPK GGLSDPRLGTI
Sbjct: 1 MDMRFPYSPAEVAKVRCVQFGILSPDEIRQMSVVQIEHSETMERGKPKPGGLSDPRLGTI 60
Query: 503 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 324
DRKMKCETC ANMAECPGHFGHLELAKPMFHIGF+KTVLAIMRCVCFNCSKILADE+DAR
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDAR 120
Query: 323 FKQALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXXDEPVKKSRGGCGAQQPNIT 144
FKQALKIRNPK+RLKRIYDACK+KKKCA +EP+KKSRGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKHRLKRIYDACKTKKKCAGGDDIDVQAQQDSEEPIKKSRGGCGAQQPNIT 180
Query: 143 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISD 3
IDGMKM+AEYKAPKKKSDD EQLPEPVERKQ LSAERVLSVLKRISD
Sbjct: 181 IDGMKMIAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLKRISD 227
>gb|KVH98536.1| Aspartate decarboxylase-like domain-containing protein [Cynara
cardunculus var. scolymus]
Length = 649
Score = 384 bits (986), Expect = e-126
Identities = 193/227 (85%), Positives = 199/227 (87%)
Frame = -3
Query: 683 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 504
MD+RFPYSPAEVAKVR VQFGILSPDEIRQMSVV +EHGET ERGKPKV GLSDPRLGTI
Sbjct: 1 MDIRFPYSPAEVAKVRLVQFGILSPDEIRQMSVVHIEHGETTERGKPKVAGLSDPRLGTI 60
Query: 503 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 324
DRKMKCETC ANMAECPGHFGHLELAKPMFHIGFMKTVL+IMRCVCFNCSKILADEED +
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 323 FKQALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXXDEPVKKSRGGCGAQQPNIT 144
FKQA KIRNPKNRLK+I DACKSK KC DEPVKKSRGGCGAQQP IT
Sbjct: 121 FKQAQKIRNPKNRLKKILDACKSKSKC-EGGDEIDSQNQDTDEPVKKSRGGCGAQQPKIT 179
Query: 143 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISD 3
I+GMKMVAEYK KKKSDD EQLPEP ERKQQLSAERVLSVLKRISD
Sbjct: 180 IEGMKMVAEYKLQKKKSDDSEQLPEPAERKQQLSAERVLSVLKRISD 226
>gb|AIO05697.1| DNA-directed RNA polymerase II subunit 1, partial [Cocos nucifera]
Length = 1705
Score = 405 bits (1041), Expect = e-126
Identities = 199/227 (87%), Positives = 207/227 (91%)
Frame = -3
Query: 683 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 504
MD RFPYSPAEVAKVR VQFGILSPDEIRQMSVVQ+EH ETMERGKPK GGLSDPRLGTI
Sbjct: 1 MDTRFPYSPAEVAKVRCVQFGILSPDEIRQMSVVQIEHSETMERGKPKPGGLSDPRLGTI 60
Query: 503 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 324
DRKMKCETC ANMAECPGHFGHLELAKPMFHIGF+KTVLAIMRCVCFNCSKILADE+DAR
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDAR 120
Query: 323 FKQALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXXDEPVKKSRGGCGAQQPNIT 144
FKQALKIRNPK+RLKRIYDACK+KKKCA +EP+KKSRGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKHRLKRIYDACKTKKKCAGGDDIDVQAQQDSEEPMKKSRGGCGAQQPNIT 180
Query: 143 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISD 3
IDGMKM+AEYKAPKKKSDD EQLPEPVERKQ LSAERVLSVLKRISD
Sbjct: 181 IDGMKMIAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLKRISD 227
>gb|PON49951.1| DNA-directed RNA polymerase, subunit gamma [Parasponia andersonii]
Length = 460
Score = 377 bits (968), Expect = e-126
Identities = 185/227 (81%), Positives = 201/227 (88%)
Frame = -3
Query: 683 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 504
MD+RFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQ+EH ETM GKPKV GLSDPRLGTI
Sbjct: 1 MDIRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQIEHSETMMGGKPKVAGLSDPRLGTI 60
Query: 503 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 324
DRKMKCETCTANMAECPGHFGHLELAKPMFHIGF+KTVL+IMRCVCFNCSKIL DE+D +
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILVDEDDHK 120
Query: 323 FKQALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXXDEPVKKSRGGCGAQQPNIT 144
FKQALKIRNPKNRLK+I DACK+K KC +EPVKKSRGGCGAQQP +T
Sbjct: 121 FKQALKIRNPKNRLKKILDACKNKAKC-EGGDEIDVQGQESEEPVKKSRGGCGAQQPKLT 179
Query: 143 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISD 3
IDGMK++AEYK+ +KKSD+ EQLPEPVERKQ L+AERVLSVLKRISD
Sbjct: 180 IDGMKIIAEYKSQRKKSDEQEQLPEPVERKQTLTAERVLSVLKRISD 226
>ref|XP_020676053.1| DNA-directed RNA polymerase II subunit 1 [Dendrobium catenatum]
Length = 1841
Score = 405 bits (1041), Expect = e-126
Identities = 199/227 (87%), Positives = 206/227 (90%)
Frame = -3
Query: 683 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 504
MD+RFPYSPAEVAKVR VQFGILSPDEIRQMSV Q+EHGETMERGKPK GGLSDPRLGTI
Sbjct: 1 MDIRFPYSPAEVAKVRCVQFGILSPDEIRQMSVAQIEHGETMERGKPKPGGLSDPRLGTI 60
Query: 503 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 324
DRKMKCETC ANMAEC GHFGHLELAKPM+HIGFMKTVLAIMRCVCFNCSKILADEED R
Sbjct: 61 DRKMKCETCMANMAECSGHFGHLELAKPMYHIGFMKTVLAIMRCVCFNCSKILADEEDTR 120
Query: 323 FKQALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXXDEPVKKSRGGCGAQQPNIT 144
FKQALKIRNPKNRLKRIYDACKSKKKCA +EP+KKSRGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKNRLKRIYDACKSKKKCAGGDDIDLQGQQDSEEPIKKSRGGCGAQQPNIT 180
Query: 143 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISD 3
+DGMKMVAEYKAPKKKS+D EQLPEPVERKQ LSAERVLSVLKRISD
Sbjct: 181 VDGMKMVAEYKAPKKKSEDQEQLPEPVERKQILSAERVLSVLKRISD 227
>ref|XP_009401403.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Musa acuminata
subsp. malaccensis]
Length = 1832
Score = 404 bits (1039), Expect = e-126
Identities = 199/227 (87%), Positives = 206/227 (90%)
Frame = -3
Query: 683 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 504
MD RFP+SPAEVAKVRTVQFGILSPDEIRQMSVVQ+EHGETMERGKPK GLSDPRLGTI
Sbjct: 1 MDTRFPFSPAEVAKVRTVQFGILSPDEIRQMSVVQIEHGETMERGKPKPAGLSDPRLGTI 60
Query: 503 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 324
DRKMKCETC ANMAECPGHFGHLELAKPMFHIGF+KTVLAIMRCVCFNCSKILADEED R
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEEDTR 120
Query: 323 FKQALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXXDEPVKKSRGGCGAQQPNIT 144
FKQALKIRNPKNRLKRIYDACKSKKKC+ +EP+KKSRGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKNRLKRIYDACKSKKKCSGGDDIDVQGQQDSEEPMKKSRGGCGAQQPNIT 180
Query: 143 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISD 3
IDGMKMVAEYKAPKKKSD+ EQLPEP ERKQ LSAERVLSVLKRISD
Sbjct: 181 IDGMKMVAEYKAPKKKSDEQEQLPEPAERKQILSAERVLSVLKRISD 227
>ref|XP_020113244.1| DNA-directed RNA polymerase II subunit 1 [Ananas comosus]
gb|OAY68410.1| DNA-directed RNA polymerase II subunit rpb1 [Ananas comosus]
Length = 1854
Score = 404 bits (1037), Expect = e-125
Identities = 199/227 (87%), Positives = 207/227 (91%)
Frame = -3
Query: 683 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 504
MDMRFP+SPAEVAKVRTVQFGILSPDEIRQMSVVQ+EH ETMERGKPK GGLSDPRLGTI
Sbjct: 1 MDMRFPFSPAEVAKVRTVQFGILSPDEIRQMSVVQIEHSETMERGKPKPGGLSDPRLGTI 60
Query: 503 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 324
DRKMKCETC ANMAECPGHFGHLELAKPMFHIGF+KTVLAIMRCVCFNCSKILADE+D R
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDTR 120
Query: 323 FKQALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXXDEPVKKSRGGCGAQQPNIT 144
FKQALKIRNPKNRLKRIYDACKSKK+CA DEPVKKSRGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKNRLKRIYDACKSKKRCAGGDDIDVQGQQDTDEPVKKSRGGCGAQQPNIT 180
Query: 143 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISD 3
+DGMKMVAE+KA KKKSDD EQLPEPVERKQ LSAERVL+VLKRISD
Sbjct: 181 VDGMKMVAEFKASKKKSDDQEQLPEPVERKQILSAERVLNVLKRISD 227
>dbj|GAU22666.1| hypothetical protein TSUD_234880 [Trifolium subterraneum]
Length = 452
Score = 374 bits (961), Expect = e-125
Identities = 182/227 (80%), Positives = 202/227 (88%)
Frame = -3
Query: 683 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 504
MD+RFP+SPAEV+KVR VQFGILSPDEIRQM+VVQ+EHGET ERGKPK+GGLSDPRLGTI
Sbjct: 1 MDIRFPFSPAEVSKVRMVQFGILSPDEIRQMAVVQIEHGETTERGKPKIGGLSDPRLGTI 60
Query: 503 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 324
DRKMKCETCTA+MAECPGHFG+LELAKPMFHIGF+KTVL+IMRCVCFNCSKILADE D +
Sbjct: 61 DRKMKCETCTASMAECPGHFGYLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADENDHK 120
Query: 323 FKQALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXXDEPVKKSRGGCGAQQPNIT 144
FKQAL+I+NPKNRL++I DACK+K KC +EPVKKSRGGCGAQQP IT
Sbjct: 121 FKQALRIKNPKNRLRKILDACKNKTKC-EGGDDIDLPGQDTEEPVKKSRGGCGAQQPKIT 179
Query: 143 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISD 3
I+GMKM+AEYKA +KKSDD EQLPEPVERKQ LSAERVL VLKRISD
Sbjct: 180 IEGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLSAERVLGVLKRISD 226
>gb|PKA55713.1| DNA-directed RNA polymerase II subunit RPB1 [Apostasia shenzhenica]
Length = 1806
Score = 402 bits (1034), Expect = e-125
Identities = 197/227 (86%), Positives = 205/227 (90%)
Frame = -3
Query: 683 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 504
M+ RF YSPAEVAKVR VQFGILSPDEIRQMSV Q+EHGETMERGKPK GGLSDPRLGTI
Sbjct: 1 METRFAYSPAEVAKVRCVQFGILSPDEIRQMSVAQIEHGETMERGKPKAGGLSDPRLGTI 60
Query: 503 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 324
DRKMKCETC ANMAECPGHFGHLELAKPMFHIGF+KTVL+IMRCVCFNCSKILADE+D R
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEDDTR 120
Query: 323 FKQALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXXDEPVKKSRGGCGAQQPNIT 144
FKQALKIRNPKNRL+RIYDACKSKKKCA +EP+KKSRGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKNRLRRIYDACKSKKKCAGGDDIDVQGQQDSEEPIKKSRGGCGAQQPNIT 180
Query: 143 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISD 3
IDGMKMVAEYKAPKKKSDD EQLPEPVERKQ LSAERVLSVLKRISD
Sbjct: 181 IDGMKMVAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLKRISD 227
>ref|XP_014660874.1| DNA-directed RNA polymerase II subunit 1 [Setaria italica]
gb|KQL00755.1| hypothetical protein SETIT_013247mg [Setaria italica]
Length = 860
Score = 385 bits (989), Expect = e-124
Identities = 190/227 (83%), Positives = 203/227 (89%)
Frame = -3
Query: 683 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 504
MD RFPYSPAEVAKV+ VQFGILSPDEIRQMSV+Q+EH ETMERGKPK GGLSDPRLGTI
Sbjct: 1 MDARFPYSPAEVAKVQLVQFGILSPDEIRQMSVIQIEHAETMERGKPKPGGLSDPRLGTI 60
Query: 503 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 324
DRK+KCETC A MAECPGHFGHLELAKPMFHIGF+KTVL+IMRCVCFNCSKILADE+D +
Sbjct: 61 DRKIKCETCMAGMAECPGHFGHLELAKPMFHIGFIKTVLSIMRCVCFNCSKILADEDDTK 120
Query: 323 FKQALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXXDEPVKKSRGGCGAQQPNIT 144
FKQALKIRNPKNRLKRIYDACKSKK CA DEPVKK RGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKNRLKRIYDACKSKKVCAGGDDLDVQEQQDTDEPVKK-RGGCGAQQPNIT 179
Query: 143 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISD 3
+DGMKMVAE+KAPKKK+DD +QLPEPVERKQ LSAERVL+VLKRISD
Sbjct: 180 VDGMKMVAEFKAPKKKTDDQDQLPEPVERKQILSAERVLNVLKRISD 226
>ref|XP_010941355.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Elaeis
guineensis]
Length = 1842
Score = 399 bits (1026), Expect = e-124
Identities = 196/227 (86%), Positives = 206/227 (90%)
Frame = -3
Query: 683 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 504
MD+RFPYSPAEVAKVR VQFGILSPDEIRQMSV Q+EHGETMERGKPK GGLSDPRLGTI
Sbjct: 1 MDVRFPYSPAEVAKVRCVQFGILSPDEIRQMSVAQIEHGETMERGKPKPGGLSDPRLGTI 60
Query: 503 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 324
DRKMKCETC ANMAECPGHFGHLELAKPMFHIGF+KTVLAIMRCVCFNCSKILADE+DAR
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDAR 120
Query: 323 FKQALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXXDEPVKKSRGGCGAQQPNIT 144
FKQALKIRNPK+RLKRI DACKSKKKCA +EP+KKSRGGCG+QQP IT
Sbjct: 121 FKQALKIRNPKHRLKRISDACKSKKKCAGGDDVDIQAQQDSEEPIKKSRGGCGSQQPTIT 180
Query: 143 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISD 3
IDGMKMVAEYKAPKKKSDD +QLPEPVERKQ LSA+RVLSVLKRISD
Sbjct: 181 IDGMKMVAEYKAPKKKSDDQDQLPEPVERKQILSADRVLSVLKRISD 227
>gb|PKU64515.1| DNA-directed RNA polymerase II subunit RPB1 [Dendrobium catenatum]
Length = 1516
Score = 394 bits (1013), Expect = e-123
Identities = 200/249 (80%), Positives = 207/249 (83%), Gaps = 19/249 (7%)
Frame = -3
Query: 692 SYTMDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRL 513
S MD+RFPYSPAEVAKVR VQFGILSPDEIRQMSV Q+EHGETMERGKPK GGLSDPRL
Sbjct: 41 SVDMDIRFPYSPAEVAKVRCVQFGILSPDEIRQMSVAQIEHGETMERGKPKPGGLSDPRL 100
Query: 512 GTIDRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADE- 336
GTIDRKMKCETC ANMAEC GHFGHLELAKPM+HIGFMKTVLAIMRCVCFNCSKILADE
Sbjct: 101 GTIDRKMKCETCMANMAECSGHFGHLELAKPMYHIGFMKTVLAIMRCVCFNCSKILADEL 160
Query: 335 ------------------EDARFKQALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXX 210
ED RFKQALKIRNPKNRLKRIYDACKSKKKCA
Sbjct: 161 YLFSCLAISLLTSIAFSQEDTRFKQALKIRNPKNRLKRIYDACKSKKKCAGGDDIDLQGQ 220
Query: 209 XXXDEPVKKSRGGCGAQQPNITIDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERV 30
+EP+KKSRGGCGAQQPNIT+DGMKMVAEYKAPKKKS+D EQLPEPVERKQ LSAERV
Sbjct: 221 QDSEEPIKKSRGGCGAQQPNITVDGMKMVAEYKAPKKKSEDQEQLPEPVERKQILSAERV 280
Query: 29 LSVLKRISD 3
LSVLKRISD
Sbjct: 281 LSVLKRISD 289
>gb|KOM28113.1| hypothetical protein LR48_Vigan499s005700 [Vigna angularis]
Length = 725
Score = 377 bits (968), Expect = e-123
Identities = 187/227 (82%), Positives = 200/227 (88%)
Frame = -3
Query: 683 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 504
MD+RFP+SPAEVAKVR VQFGILSPDEIRQMSVVQ+EHGET ERGKPKVGGLSDPRLGTI
Sbjct: 1 MDIRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI 60
Query: 503 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 324
DRK+KCETCTA+MAECPGHFGHLELAKPMFHIGF+KTVL IMRCVCFNCSKILADE D +
Sbjct: 61 DRKLKCETCTASMAECPGHFGHLELAKPMFHIGFLKTVLTIMRCVCFNCSKILADENDHK 120
Query: 323 FKQALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXXDEPVKKSRGGCGAQQPNIT 144
FK AL+IRNPKNRLK+I DACK+K KC DEPVKKSRGGCGAQQP IT
Sbjct: 121 FKLALRIRNPKNRLKKILDACKNKGKC-EGGDEIDIPGQDTDEPVKKSRGGCGAQQPKIT 179
Query: 143 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISD 3
I+GMKM+AEYKA +KKSDD EQLPEPVERKQ LSAERVL VLKRISD
Sbjct: 180 IEGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLSAERVLGVLKRISD 226