BLASTX nr result

ID: Ophiopogon25_contig00007547 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00007547
         (1251 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020241391.1| homeobox-leucine zipper protein HOX6-like [A...    72   2e-23
ref|XP_020114943.1| homeobox-leucine zipper protein HOX6-like [A...    53   3e-09

>ref|XP_020241391.1| homeobox-leucine zipper protein HOX6-like [Asparagus officinalis]
 gb|ONK58841.1| uncharacterized protein A4U43_C08F290 [Asparagus officinalis]
          Length = 224

 Score = 72.4 bits (176), Expect(2) = 2e-23
 Identities = 29/34 (85%), Positives = 30/34 (88%)
 Frame = -3

Query: 970 VPSEQQQFCFHQPSWPPDQSCPTSQWWEFWPMNE 869
           VPSEQQ FCFHQPSWP DQ+C  SQWWEFWPMNE
Sbjct: 192 VPSEQQ-FCFHQPSWPTDQACANSQWWEFWPMNE 224



 Score = 67.0 bits (162), Expect(2) = 2e-23
 Identities = 39/82 (47%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
 Frame = -1

Query: 1248 ALRADYEELLSSFESXXXXXXXXXXXXXXXXXXLDKPMDERGKESDYSKTDRHQSRPNSL 1069
            ALRADY+ LLS+FES                  L+KPM+ERG ESD  K D+   RPN +
Sbjct: 95   ALRADYDALLSNFESLKHEKQLLAKQLQKLAELLEKPMEERGNESDQEKADQ---RPNLM 151

Query: 1068 LTDKTDTRTISS-DDEENQYKK 1006
            LT+KT+ R +SS DDEEN++ +
Sbjct: 152  LTEKTEMRLMSSDDDEENRHTR 173


>ref|XP_020114943.1| homeobox-leucine zipper protein HOX6-like [Ananas comosus]
 gb|OAY67743.1| Homeobox-leucine zipper protein HOX6 [Ananas comosus]
          Length = 234

 Score = 53.1 bits (126), Expect(2) = 3e-09
 Identities = 21/30 (70%), Positives = 24/30 (80%)
 Frame = -3

Query: 958 QQQFCFHQPSWPPDQSCPTSQWWEFWPMNE 869
           + QF F Q SWP DQSC ++QWWEFWPMNE
Sbjct: 206 EDQFGF-QTSWPSDQSCTSTQWWEFWPMNE 234



 Score = 38.1 bits (87), Expect(2) = 3e-09
 Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
 Frame = -1

Query: 1251 NALRADYEELLSSFESXXXXXXXXXXXXXXXXXXLDKPMDER----GKESDYSKTDRHQS 1084
            +ALR+DY+ LL+SF+S                  LDKP + R    G   +         
Sbjct: 95   SALRSDYDLLLASFDSLKKEKHMLLKQLQKLNGLLDKPQEGRSRCYGDSENADLNGATDK 154

Query: 1083 RPNSLLTDKTDTRTISSDDEENQ 1015
            RPN  + +++D R +   DEE++
Sbjct: 155  RPNFQMKEESDARVVPYSDEEDK 177


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