BLASTX nr result

ID: Ophiopogon25_contig00006231 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00006231
         (465 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012466927.1| PREDICTED: probable plastid-lipid-associated...    62   3e-08

>ref|XP_012466927.1| PREDICTED: probable plastid-lipid-associated protein 7,
           chloroplastic isoform X1 [Gossypium raimondii]
          Length = 304

 Score = 61.6 bits (148), Expect = 3e-08
 Identities = 34/64 (53%), Positives = 43/64 (67%), Gaps = 7/64 (10%)
 Frame = -1

Query: 462 EGWLDITYPLSLQVY*EFIFA----IMSFCFSLN---KFRYVDDCLRIGRDDKGNIFVLE 304
           EGWL+ITYPL   +   ++F     + S C SL+     RYVDD +RIGRDDKGNIF+LE
Sbjct: 238 EGWLEITYPLLFLLVFWWMFCGINIVTSHCCSLSWVEHCRYVDDRMRIGRDDKGNIFILE 297

Query: 303 RTGE 292
           R+ E
Sbjct: 298 RSEE 301


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