BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00005904
         (2222 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK79917.1| uncharacterized protein A4U43_C01F11790 [Asparagu...   626   0.0  
ref|XP_020244308.1| RNA polymerase sigma factor sigB isoform X1 ...   590   0.0  
ref|XP_020244309.1| RNA polymerase sigma factor sigB isoform X2 ...   568   0.0  
ref|XP_008805674.1| PREDICTED: RNA polymerase sigma factor sigB ...   558   0.0  
ref|XP_020244310.1| RNA polymerase sigma factor sigB isoform X3 ...   555   0.0  
ref|XP_010943391.1| PREDICTED: RNA polymerase sigma factor sigB-...   530   e-178
ref|XP_009398609.1| PREDICTED: RNA polymerase sigma factor sigB-...   529   e-177
ref|XP_010661180.1| PREDICTED: RNA polymerase sigma factor sigB ...   520   e-174
ref|XP_010278441.1| PREDICTED: RNA polymerase sigma factor sigB-...   519   e-173
ref|XP_010251515.1| PREDICTED: RNA polymerase sigma factor sigB-...   513   e-171
ref|XP_009408073.1| PREDICTED: RNA polymerase sigma factor sigB-...   508   e-170
ref|XP_017977747.1| PREDICTED: RNA polymerase sigma factor sigB ...   507   e-169
ref|XP_021283422.1| RNA polymerase sigma factor sigB [Herrania u...   506   e-168
ref|XP_010052665.1| PREDICTED: RNA polymerase sigma factor sigB ...   504   e-168
ref|XP_017977746.1| PREDICTED: RNA polymerase sigma factor sigB ...   501   e-166
gb|OMP03365.1| RNA polymerase sigma-70 [Corchorus capsularis]         498   e-165
ref|XP_010052664.1| PREDICTED: RNA polymerase sigma factor sigB ...   497   e-165
ref|XP_015895073.1| PREDICTED: RNA polymerase sigma factor sigB ...   494   e-164
gb|EOY10370.1| RNApolymerase sigma subunit 2 [Theobroma cacao]        490   e-161
ref|XP_018817643.1| PREDICTED: RNA polymerase sigma factor sigB ...   488   e-161

>gb|ONK79917.1| uncharacterized protein A4U43_C01F11790 [Asparagus officinalis]
          Length = 531

 Score =  626 bits (1615), Expect = 0.0
 Identities = 363/562 (64%), Positives = 393/562 (69%), Gaps = 7/562 (1%)
 Frame = -1

Query: 2078 MASLVPPFNCPSLHQTHTHQAKNRCPVSFRIQCISAQMTAVIDFEKTQIPGLDAYSSS-- 1905
            MASLVPPFNCPSLHQT   QAK R   SFRI+C S+QMTAVIDFEKTQIP +++YS+S  
Sbjct: 1    MASLVPPFNCPSLHQTP--QAKARGLFSFRIECSSSQMTAVIDFEKTQIPTVESYSNSLA 58

Query: 1904 -----RFLGAFGPPAKTDFKATLPREVLLTGXXXXXXXXXXXXXXXXXXXXXXXXXXAQM 1740
                 R++GA G P K DF+ATL  E LLT                           A M
Sbjct: 59   AGRASRYVGAVGLPFKADFEATLATEELLTSEEATIEAAAAEAIALARAALEVAKDAALM 118

Query: 1739 KGSEASVKFDRPENFPSKPDMILLERVRLEEMESLGKANDSAIPETEPLEGPIPPSPSED 1560
            KG E S+   R EN   + D ILLERVR EE+ESLG  N+S+ PE E LE        ED
Sbjct: 119  KGKEPSIS--RSENTQPEHDQILLERVRQEELESLGTENNSSTPEIE-LE--------ED 167

Query: 1559 EGISSLLHNELDLQEMQDSECIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1380
             G      N++DLQ++  S+CI                                      
Sbjct: 168  NGTQ----NDVDLQQVLGSKCIAVRSRRQIERRARRAKAAVKAASSVILVKSGSSSKKKR 223

Query: 1379 XXVHEIDYSDPLRYLRXXXXXXXXXXXXXXXXXSQGIQELIKLERLQEELTERNGSPSTF 1200
              V EIDYSDPLR+                        ELIKLERLQEEL+ERNGSP TF
Sbjct: 224  STVQEIDYSDPLRF--------------DLTLIFNRKPELIKLERLQEELSERNGSPPTF 269

Query: 1199 AQWATAAGVDSKTLRKKLNYGKHCKDKMIISNIRLVISIAKNFQGAGMNLQDLVQEGCRG 1020
            AQWATAAGVDS+TLRK+LNYGK+CKDKMI SNIRLVISIAKNFQGAGMNLQDLVQEGCRG
Sbjct: 270  AQWATAAGVDSRTLRKRLNYGKYCKDKMIKSNIRLVISIAKNFQGAGMNLQDLVQEGCRG 329

Query: 1019 LVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLSDQSRTIRLPFHMVEATYRVREARKQLY 840
            LVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLSDQSRTIRLPFHMVEATYRVREARKQLY
Sbjct: 330  LVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLSDQSRTIRLPFHMVEATYRVREARKQLY 389

Query: 839  SENGRYPENEEIAEAAGLTMKRFTAVMLTPKAPRSLDQKFGIDQSLKPSEVIADPEASTS 660
            SENGRYP+NEEIAEAAGLTMKRFTAVMLTPKAPRSLDQK GI+QSLKPSEVIADPEA TS
Sbjct: 390  SENGRYPDNEEIAEAAGLTMKRFTAVMLTPKAPRSLDQKIGINQSLKPSEVIADPEALTS 449

Query: 659  EEILIKQIVKRDLHKVLDSLSAREKQVIKWRFGLGDGRMKTLQEIGLAMGVSRERIRQIE 480
            EEILIKQIVKRDL+KVLDSLS REKQVIKWRFGLGDGRMKTLQEIG ++GVSRERIRQIE
Sbjct: 450  EEILIKQIVKRDLYKVLDSLSPREKQVIKWRFGLGDGRMKTLQEIGESIGVSRERIRQIE 509

Query: 479  SCAFXXXXXXXXXXXXRQHLIP 414
            S AF            RQHL+P
Sbjct: 510  SQAFRKLKNKKRTKNLRQHLMP 531


>ref|XP_020244308.1| RNA polymerase sigma factor sigB isoform X1 [Asparagus officinalis]
 gb|ONK58877.1| uncharacterized protein A4U43_C08F650 [Asparagus officinalis]
          Length = 557

 Score =  590 bits (1522), Expect = 0.0
 Identities = 326/547 (59%), Positives = 377/547 (68%), Gaps = 10/547 (1%)
 Frame = -1

Query: 2078 MASLVPPFNCPSLHQTHTH---QAKNRCPVSFRIQCISAQMTAVIDFEKTQIPGLDAYSS 1908
            MA LVP F CPS H  H H   Q K R PV  R QC+S+ MTAVI+ +KT +P LDA+++
Sbjct: 1    MACLVPQFKCPSSHHHHHHHPLQVKPRGPVYVRNQCVSSLMTAVIELDKTYVPTLDAHTN 60

Query: 1907 SR-------FLGAFGPPAKTDFKATLPREVLLTGXXXXXXXXXXXXXXXXXXXXXXXXXX 1749
            S        ++GA GPP+KTD+K T   E LLT                           
Sbjct: 61   SSAVTRPLSYVGAIGPPSKTDYKTTWHAETLLTREEATIAAAAAEAVALARAAVELAKDA 120

Query: 1748 AQMKGSEASVKFDRPENFPSKPDMILLERVRLEEMESLGKANDSAIPETEPLEGPIPPSP 1569
            AQM   +  VK ++ ENFPS+ D+  L+R  L E+E L   N+         EG   P+ 
Sbjct: 121  AQMIRKDLPVKLEKAENFPSQADIRQLKRPTLTELELLDTTNNQE-------EGHNTPNQ 173

Query: 1568 SEDEGISSLLHNELDLQEMQDSECIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1389
            S+DEGISSL+ NE DLQ MQ+SE I                                   
Sbjct: 174  SKDEGISSLMLNEPDLQRMQESENITVRSMRQSERRARRAKAAEKAANNVISVKSGTSGK 233

Query: 1388 XXXXXVHEIDYSDPLRYLRXXXXXXXXXXXXXXXXXSQGIQELIKLERLQEELTERNGSP 1209
                   EIDYSDPLRYLR                 S+GIQ+LIKLE LQ ELTER G+P
Sbjct: 234  KKRSAAQEIDYSDPLRYLRGTTSNSKLLTADEELELSEGIQDLIKLESLQAELTERYGNP 293

Query: 1208 STFAQWATAAGVDSKTLRKKLNYGKHCKDKMIISNIRLVISIAKNFQGAGMNLQDLVQEG 1029
             TFAQWA AA VD++TLRK+LNYG++CKDKMI SNIRLVISIAKNFQG+GMNLQDLVQEG
Sbjct: 294  PTFAQWAMAARVDTRTLRKRLNYGRYCKDKMIKSNIRLVISIAKNFQGSGMNLQDLVQEG 353

Query: 1028 CRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLSDQSRTIRLPFHMVEATYRVREARK 849
            CRGLVKGAEKFDASKGFKFSTYAHWWIKQAVR+SLSDQSRTIRLPFHMVEATYRVREARK
Sbjct: 354  CRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREARK 413

Query: 848  QLYSENGRYPENEEIAEAAGLTMKRFTAVMLTPKAPRSLDQKFGIDQSLKPSEVIADPEA 669
            QLYSENGR+P++EEIAEA GLTMKR TAVML PKAPRSL+QK GI+Q+LKPSEVI+DP+A
Sbjct: 414  QLYSENGRHPDDEEIAEATGLTMKRLTAVMLIPKAPRSLEQKIGINQTLKPSEVISDPDA 473

Query: 668  STSEEILIKQIVKRDLHKVLDSLSAREKQVIKWRFGLGDGRMKTLQEIGLAMGVSRERIR 489
             T+EEIL+KQ++K+DL+KVLDSL+ REKQV++WRFGL DGRMKTLQEIG  MGVSRERIR
Sbjct: 474  LTTEEILVKQLMKQDLNKVLDSLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIR 533

Query: 488  QIESCAF 468
            QIESCAF
Sbjct: 534  QIESCAF 540


>ref|XP_020244309.1| RNA polymerase sigma factor sigB isoform X2 [Asparagus officinalis]
          Length = 554

 Score =  568 bits (1465), Expect = 0.0
 Identities = 313/523 (59%), Positives = 364/523 (69%), Gaps = 7/523 (1%)
 Frame = -1

Query: 2015 KNRCPVSFRIQCISAQMTAVIDFEKTQIPGLDAYSSSR-------FLGAFGPPAKTDFKA 1857
            K R PV  R QC+S+ MTAVI+ +KT +P LDA+++S        ++GA GPP+KTD+K 
Sbjct: 22   KPRGPVYVRNQCVSSLMTAVIELDKTYVPTLDAHTNSSAVTRPLSYVGAIGPPSKTDYKT 81

Query: 1856 TLPREVLLTGXXXXXXXXXXXXXXXXXXXXXXXXXXAQMKGSEASVKFDRPENFPSKPDM 1677
            T   E LLT                           AQM   +  VK ++ ENFPS+ D+
Sbjct: 82   TWHAETLLTREEATIAAAAAEAVALARAAVELAKDAAQMIRKDLPVKLEKAENFPSQADI 141

Query: 1676 ILLERVRLEEMESLGKANDSAIPETEPLEGPIPPSPSEDEGISSLLHNELDLQEMQDSEC 1497
              L+R  L E+E L   N+         EG   P+ S+DEGISSL+ NE DLQ MQ+SE 
Sbjct: 142  RQLKRPTLTELELLDTTNNQE-------EGHNTPNQSKDEGISSLMLNEPDLQRMQESEN 194

Query: 1496 IXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHEIDYSDPLRYLRXXXXX 1317
            I                                          EIDYSDPLRYLR     
Sbjct: 195  ITVRSMRQSERRARRAKAAEKAANNVISVKSGTSGKKKRSAAQEIDYSDPLRYLRGTTSN 254

Query: 1316 XXXXXXXXXXXXSQGIQELIKLERLQEELTERNGSPSTFAQWATAAGVDSKTLRKKLNYG 1137
                        S+GIQ+LIKLE LQ ELTER G+P TFAQWA AA VD++TLRK+LNYG
Sbjct: 255  SKLLTADEELELSEGIQDLIKLESLQAELTERYGNPPTFAQWAMAARVDTRTLRKRLNYG 314

Query: 1136 KHCKDKMIISNIRLVISIAKNFQGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAH 957
            ++CKDKMI SNIRLVISIAKNFQG+GMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAH
Sbjct: 315  RYCKDKMIKSNIRLVISIAKNFQGSGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAH 374

Query: 956  WWIKQAVRRSLSDQSRTIRLPFHMVEATYRVREARKQLYSENGRYPENEEIAEAAGLTMK 777
            WWIKQAVR+SLSDQSRTIRLPFHMVEATYRVREARKQLYSENGR+P++EEIAEA GLTMK
Sbjct: 375  WWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREARKQLYSENGRHPDDEEIAEATGLTMK 434

Query: 776  RFTAVMLTPKAPRSLDQKFGIDQSLKPSEVIADPEASTSEEILIKQIVKRDLHKVLDSLS 597
            R TAVML PKAPRSL+QK GI+Q+LKPSEVI+DP+A T+EEIL+KQ++K+DL+KVLDSL+
Sbjct: 435  RLTAVMLIPKAPRSLEQKIGINQTLKPSEVISDPDALTTEEILVKQLMKQDLNKVLDSLN 494

Query: 596  AREKQVIKWRFGLGDGRMKTLQEIGLAMGVSRERIRQIESCAF 468
             REKQV++WRFGL DGRMKTLQEIG  MGVSRERIRQIESCAF
Sbjct: 495  PREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAF 537


>ref|XP_008805674.1| PREDICTED: RNA polymerase sigma factor sigB [Phoenix dactylifera]
          Length = 566

 Score =  558 bits (1438), Expect = 0.0
 Identities = 314/553 (56%), Positives = 364/553 (65%), Gaps = 16/553 (2%)
 Frame = -1

Query: 2078 MASLVPPFNCPS---------LHQTHTHQAKNRCPVSFRIQCISAQMTAVIDFEKTQIPG 1926
            MA LVP F CPS         L    +  +K R  V FR  C+S    AVID ++  IP 
Sbjct: 1    MACLVPQFKCPSISPDAHFRPLSHHPSLNSKARDSVCFRSPCVSTLTAAVIDIQR--IPS 58

Query: 1925 LDAYSSS-------RFLGAFGPPAKTDFKATLPREVLLTGXXXXXXXXXXXXXXXXXXXX 1767
            L+A+S+S        ++GA GPP KT  +ATL  E LLTG                    
Sbjct: 59   LEAHSTSLDATRPLTYVGAVGPPMKTSIEATLATETLLTGEEAVIAAAAAEAVALARAAV 118

Query: 1766 XXXXXXAQMKGSEASVKFDRPENFPSKPDMILLERVRLEEMESLGKANDSAIPETEPLEG 1587
                  AQ+ G++ SVK ++ E+F S+ D   LERVRL EME +   N+S   +TEP E 
Sbjct: 119  EVAKDAAQIIGNDPSVKLEKSEDFSSEADAFRLERVRLTEMELIRTTNNSTPTDTEPHEA 178

Query: 1586 PIPPSPSEDEGISSLLHNELDLQEMQDSECIXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1407
                 PS+   +S+L H EL+ Q+MQ  E I                             
Sbjct: 179  K---DPSQGTDVSNLTHKELESQQMQYPESIAVRSGRQTDRKARRTRAAEKAAVSVIPVK 235

Query: 1406 XXXXXXXXXXXVHEIDYSDPLRYLRXXXXXXXXXXXXXXXXXSQGIQELIKLERLQEELT 1227
                         E+DYSDPLRYLR                 S+ IQ+++KLERLQ+EL 
Sbjct: 236  SGSTSKKKRSTFQEVDYSDPLRYLRGTTSTSKLLTAAEELELSEAIQDMLKLERLQQELA 295

Query: 1226 ERNGSPSTFAQWATAAGVDSKTLRKKLNYGKHCKDKMIISNIRLVISIAKNFQGAGMNLQ 1047
            ER+G   TFAQWA AAGVD +TLRK+LNYG+ CKDKMI SNIRLVISIAKN+QGAGMNLQ
Sbjct: 296  ERHGGQPTFAQWAAAAGVDQRTLRKRLNYGRFCKDKMIKSNIRLVISIAKNYQGAGMNLQ 355

Query: 1046 DLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLSDQSRTIRLPFHMVEATYR 867
            DLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLS+QSRTIRLPFHMVEATYR
Sbjct: 356  DLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLSEQSRTIRLPFHMVEATYR 415

Query: 866  VREARKQLYSENGRYPENEEIAEAAGLTMKRFTAVMLTPKAPRSLDQKFGIDQSLKPSEV 687
            VREA+KQLYSENGRYP+ +E+AEA GL+MKR  AVMLTPKAPRSLDQK GI+QSLKPSEV
Sbjct: 416  VREAKKQLYSENGRYPDYQEVAEATGLSMKRLNAVMLTPKAPRSLDQKIGINQSLKPSEV 475

Query: 686  IADPEASTSEEILIKQIVKRDLHKVLDSLSAREKQVIKWRFGLGDGRMKTLQEIGLAMGV 507
            IADPEA TSEEILIKQ  K+DL+KVLD+L+ REKQV++WRFGL DG  KTLQEIG  MGV
Sbjct: 476  IADPEAETSEEILIKQFRKQDLNKVLDTLNPREKQVVRWRFGLEDGMTKTLQEIGELMGV 535

Query: 506  SRERIRQIESCAF 468
            SRERIRQIES AF
Sbjct: 536  SRERIRQIESSAF 548


>ref|XP_020244310.1| RNA polymerase sigma factor sigB isoform X3 [Asparagus officinalis]
          Length = 517

 Score =  555 bits (1430), Expect = 0.0
 Identities = 305/507 (60%), Positives = 354/507 (69%), Gaps = 7/507 (1%)
 Frame = -1

Query: 1967 MTAVIDFEKTQIPGLDAYSSSR-------FLGAFGPPAKTDFKATLPREVLLTGXXXXXX 1809
            MTAVI+ +KT +P LDA+++S        ++GA GPP+KTD+K T   E LLT       
Sbjct: 1    MTAVIELDKTYVPTLDAHTNSSAVTRPLSYVGAIGPPSKTDYKTTWHAETLLTREEATIA 60

Query: 1808 XXXXXXXXXXXXXXXXXXXXAQMKGSEASVKFDRPENFPSKPDMILLERVRLEEMESLGK 1629
                                AQM   +  VK ++ ENFPS+ D+  L+R  L E+E L  
Sbjct: 61   AAAAEAVALARAAVELAKDAAQMIRKDLPVKLEKAENFPSQADIRQLKRPTLTELELLDT 120

Query: 1628 ANDSAIPETEPLEGPIPPSPSEDEGISSLLHNELDLQEMQDSECIXXXXXXXXXXXXXXX 1449
             N+         EG   P+ S+DEGISSL+ NE DLQ MQ+SE I               
Sbjct: 121  TNNQE-------EGHNTPNQSKDEGISSLMLNEPDLQRMQESENITVRSMRQSERRARRA 173

Query: 1448 XXXXXXXXXXXXXXXXXXXXXXXXXVHEIDYSDPLRYLRXXXXXXXXXXXXXXXXXSQGI 1269
                                       EIDYSDPLRYLR                 S+GI
Sbjct: 174  KAAEKAANNVISVKSGTSGKKKRSAAQEIDYSDPLRYLRGTTSNSKLLTADEELELSEGI 233

Query: 1268 QELIKLERLQEELTERNGSPSTFAQWATAAGVDSKTLRKKLNYGKHCKDKMIISNIRLVI 1089
            Q+LIKLE LQ ELTER G+P TFAQWA AA VD++TLRK+LNYG++CKDKMI SNIRLVI
Sbjct: 234  QDLIKLESLQAELTERYGNPPTFAQWAMAARVDTRTLRKRLNYGRYCKDKMIKSNIRLVI 293

Query: 1088 SIAKNFQGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLSDQSR 909
            SIAKNFQG+GMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVR+SLSDQSR
Sbjct: 294  SIAKNFQGSGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSR 353

Query: 908  TIRLPFHMVEATYRVREARKQLYSENGRYPENEEIAEAAGLTMKRFTAVMLTPKAPRSLD 729
            TIRLPFHMVEATYRVREARKQLYSENGR+P++EEIAEA GLTMKR TAVML PKAPRSL+
Sbjct: 354  TIRLPFHMVEATYRVREARKQLYSENGRHPDDEEIAEATGLTMKRLTAVMLIPKAPRSLE 413

Query: 728  QKFGIDQSLKPSEVIADPEASTSEEILIKQIVKRDLHKVLDSLSAREKQVIKWRFGLGDG 549
            QK GI+Q+LKPSEVI+DP+A T+EEIL+KQ++K+DL+KVLDSL+ REKQV++WRFGL DG
Sbjct: 414  QKIGINQTLKPSEVISDPDALTTEEILVKQLMKQDLNKVLDSLNPREKQVVRWRFGLEDG 473

Query: 548  RMKTLQEIGLAMGVSRERIRQIESCAF 468
            RMKTLQEIG  MGVSRERIRQIESCAF
Sbjct: 474  RMKTLQEIGELMGVSRERIRQIESCAF 500


>ref|XP_010943391.1| PREDICTED: RNA polymerase sigma factor sigB-like [Elaeis guineensis]
          Length = 555

 Score =  530 bits (1365), Expect = e-178
 Identities = 307/553 (55%), Positives = 357/553 (64%), Gaps = 16/553 (2%)
 Frame = -1

Query: 2078 MASLVPPFNCPSLH-----QTHTHQ----AKNRCPVSFRIQCISAQMTAVIDFEKTQIPG 1926
            MA LVP F CPS+      ++ +H     +K R  V FR QC+S    AVID E   I  
Sbjct: 1    MACLVPQFKCPSMSSDAHFRSLSHHPSLNSKARDSVCFRSQCVSTPTAAVIDME--HILS 58

Query: 1925 LDAYSSS-------RFLGAFGPPAKTDFKATLPREVLLTGXXXXXXXXXXXXXXXXXXXX 1767
            L+A S+S        ++GA GPP KT+ +ATL  E LLTG                    
Sbjct: 59   LEARSTSLAATRPLTYVGAIGPPTKTNMEATLATEALLTGEEAIIAAAAAEAVALARTAV 118

Query: 1766 XXXXXXAQMKGSEASVKFDRPENFPSKPDMILLERVRLEEMESLGKANDSAIPETEPLEG 1587
                  A    ++ SVK ++  +F S+ D++ LER              S   +T+P E 
Sbjct: 119  EAAKDAALTIANDPSVKLEKSLDFSSEADILQLER--------------STATDTKPHEE 164

Query: 1586 PIPPSPSEDEGISSLLHNELDLQEMQDSECIXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1407
             +   PS+D  IS+L+HNEL+ Q+M  S  I                             
Sbjct: 165  HLAKDPSQDVDISNLIHNELEPQKMHYSGSIAVRSGRQTERIARRARAAERAASSVIPVK 224

Query: 1406 XXXXXXXXXXXVHEIDYSDPLRYLRXXXXXXXXXXXXXXXXXSQGIQELIKLERLQEELT 1227
                         EIDYSDPLRYLR                 S+GIQ+L+KLERL+EEL 
Sbjct: 225  SGSSSKKKRSAFQEIDYSDPLRYLRGTTSTSKLLTAAEELELSEGIQDLLKLERLREELE 284

Query: 1226 ERNGSPSTFAQWATAAGVDSKTLRKKLNYGKHCKDKMIISNIRLVISIAKNFQGAGMNLQ 1047
            ERNG+  T AQWA AAGVD +TLRK+LNYG  CKDKMI SNIRLVISIAKN+QGAGMNLQ
Sbjct: 285  ERNGAQPTLAQWAAAAGVDQRTLRKRLNYGTFCKDKMITSNIRLVISIAKNYQGAGMNLQ 344

Query: 1046 DLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLSDQSRTIRLPFHMVEATYR 867
            DLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLS+QSRTIRLPFHMVEATYR
Sbjct: 345  DLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLSEQSRTIRLPFHMVEATYR 404

Query: 866  VREARKQLYSENGRYPENEEIAEAAGLTMKRFTAVMLTPKAPRSLDQKFGIDQSLKPSEV 687
            VR+A KQLY+ENGR+P+ EEIAEA GL+MKR  AVML PKAPRSLDQK GI+QSLKPSEV
Sbjct: 405  VRQAEKQLYNENGRHPDYEEIAEATGLSMKRLNAVMLIPKAPRSLDQKIGINQSLKPSEV 464

Query: 686  IADPEASTSEEILIKQIVKRDLHKVLDSLSAREKQVIKWRFGLGDGRMKTLQEIGLAMGV 507
            IADP+A TSEEILIKQ +K+DL+KVL+SL+ REKQVI+WRFGL DG  KTLQEIG  MGV
Sbjct: 465  IADPKAETSEEILIKQFMKQDLNKVLNSLNPREKQVIRWRFGLEDGMTKTLQEIGELMGV 524

Query: 506  SRERIRQIESCAF 468
            SRERIRQIES AF
Sbjct: 525  SRERIRQIESNAF 537


>ref|XP_009398609.1| PREDICTED: RNA polymerase sigma factor sigB-like [Musa acuminata
            subsp. malaccensis]
          Length = 567

 Score =  529 bits (1363), Expect = e-177
 Identities = 304/551 (55%), Positives = 351/551 (63%), Gaps = 14/551 (2%)
 Frame = -1

Query: 2078 MASLVPPFNCPSLHQTHTHQAKNRCP-----VSFRIQCISAQMTAVIDFEKTQIPGLDAY 1914
            MA LVP F  PS          +  P     V FR +C+ +  TAVIDFE  QIP L+A+
Sbjct: 1    MACLVPQFKPPSSDSLARPSLPSLHPRAREFVCFRSRCVLSPTTAVIDFE--QIPKLEAH 58

Query: 1913 SSSR---------FLGAFGPPAKTDFKATLPREVLLTGXXXXXXXXXXXXXXXXXXXXXX 1761
            S+S          + G+ GPP KT  +ATL  E LL                        
Sbjct: 59   STSSSTCAIRPLTYSGSVGPPIKTSIEATLASETLLQCDEAVIAAAAAEAVALARAALEL 118

Query: 1760 XXXXAQMKGSEASVKFDRPENFPSKPDMILLERVRLEEMESLGKANDSAIPETEPLEGPI 1581
                AQM G   S + ++ E  PS+ D+  LERV L E E  G  N  A  ET P E  +
Sbjct: 119  AKDAAQMIGKNLSAEVEKLEETPSEADIKWLERVSLTETEWAGFTNHPAATETIPFEYNV 178

Query: 1580 PPSPSEDEGISSLLHNELDLQEMQDSECIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1401
                     ISS   +E + Q MQ  E I                               
Sbjct: 179  SLDQYASTDISSSTFDEPEFQGMQHIENIAVRSGRQIERRARRARAADKATAGVISLKSG 238

Query: 1400 XXXXXXXXXVHEIDYSDPLRYLRXXXXXXXXXXXXXXXXXSQGIQELIKLERLQEELTER 1221
                       EIDYSDPLRYLR                 S+GIQ L+KLERLQ++L ER
Sbjct: 239  SSGKKKRSAFQEIDYSDPLRYLRGTTSTSKLLTAAEEIELSEGIQSLLKLERLQQDLAER 298

Query: 1220 NGSPSTFAQWATAAGVDSKTLRKKLNYGKHCKDKMIISNIRLVISIAKNFQGAGMNLQDL 1041
            NG   TFAQWA AAG+D KTLRK++N+G +CKDKMI SNIRLVISIAKN+QGAG+NLQDL
Sbjct: 299  NGCQPTFAQWAAAAGIDQKTLRKRINHGTYCKDKMIKSNIRLVISIAKNYQGAGINLQDL 358

Query: 1040 VQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLSDQSRTIRLPFHMVEATYRVR 861
            VQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVR+SLS+QSRTIRLPFHMVEATYRVR
Sbjct: 359  VQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSEQSRTIRLPFHMVEATYRVR 418

Query: 860  EARKQLYSENGRYPENEEIAEAAGLTMKRFTAVMLTPKAPRSLDQKFGIDQSLKPSEVIA 681
            EA+K+LYSENGR+P+NEE+AEAAGL+MKR  AVMLTPKAPRSLDQK GI+QSLK SEVIA
Sbjct: 419  EAKKKLYSENGRHPDNEEVAEAAGLSMKRLAAVMLTPKAPRSLDQKIGINQSLKASEVIA 478

Query: 680  DPEASTSEEILIKQIVKRDLHKVLDSLSAREKQVIKWRFGLGDGRMKTLQEIGLAMGVSR 501
            DP A TSE+IL+KQ ++ DL+KVLD+L+ REKQV++WRFGL DGRMKTLQEIG  MGVSR
Sbjct: 479  DPAAKTSEDILMKQFMREDLNKVLDTLNLREKQVVRWRFGLDDGRMKTLQEIGELMGVSR 538

Query: 500  ERIRQIESCAF 468
            ERIRQIESCAF
Sbjct: 539  ERIRQIESCAF 549


>ref|XP_010661180.1| PREDICTED: RNA polymerase sigma factor sigB [Vitis vinifera]
 emb|CBI40014.3| unnamed protein product, partial [Vitis vinifera]
          Length = 575

 Score =  520 bits (1338), Expect = e-174
 Identities = 295/574 (51%), Positives = 359/574 (62%), Gaps = 20/574 (3%)
 Frame = -1

Query: 2078 MASLVPPFNCP----SLHQTHTHQAKNRCPVSFRIQC--------ISAQMTAVIDFEKTQ 1935
            M+ L+P F CP    S H      +KNR  + FR+QC        +S   TAV+D EK +
Sbjct: 1    MSCLLPQFKCPPDTFSTHPKLHILSKNREAIYFRVQCALSTTSPPLSTSTTAVLDIEKLR 60

Query: 1934 IPGLDAYSSS-------RFLGAFGPPAKTDFKATLPREVLLTGXXXXXXXXXXXXXXXXX 1776
            +P L+++S+S        ++G  GPP + +F+ATL RE LLT                  
Sbjct: 61   LPSLESHSNSVAAHRPWTYIGVVGPPTEANFEATLARETLLTSEEAVIAAAAAEAVALAK 120

Query: 1775 XXXXXXXXXAQMKGSEASVKFD-RPENFPSKPDMILLERVRLEEMESLGKANDSAIPETE 1599
                     A++ G   S K + +P +F S  D     R++  E E +G   DS   ET 
Sbjct: 121  AAVKVAKDAARLVGKNNSAKSETKPASFLSGDDTSQFRRIQFTETERIGILGDSVGAETG 180

Query: 1598 PLEGPIPPSPSEDEGISSLLHNELDLQEMQDSECIXXXXXXXXXXXXXXXXXXXXXXXXX 1419
             ++       +ED         EL+L E + S+ I                         
Sbjct: 181  MVDYNSLQDVTEDSDDLEPTLEELELLEAEFSKSIVVRSNRQVERKARRARAAEKASAGV 240

Query: 1418 XXXXXXXXXXXXXXXVHEIDYSDPLRYLRXXXXXXXXXXXXXXXXXSQGIQELIKLERLQ 1239
                           + E+DYSDPLRYLR                 S+GIQ+L+KLE+LQ
Sbjct: 241  VSVRSGSTSRRKRVSLQEVDYSDPLRYLRGTTSTSRLLTATEELELSEGIQDLLKLEKLQ 300

Query: 1238 EELTERNGSPSTFAQWATAAGVDSKTLRKKLNYGKHCKDKMIISNIRLVISIAKNFQGAG 1059
            E+L ER G   TFAQWA AAGVD KTLR++ NYG  CKDKMI SNIRLVISIAKN+QGAG
Sbjct: 301  EDLEERFGVKPTFAQWAAAAGVDQKTLRRRTNYGIRCKDKMIKSNIRLVISIAKNYQGAG 360

Query: 1058 MNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLSDQSRTIRLPFHMVE 879
            MN+QDLVQEGCRGLV+GAEKFDASKGFKFSTYAHWWIKQAVR+SLSDQSRTIRLPFHMVE
Sbjct: 361  MNIQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVE 420

Query: 878  ATYRVREARKQLYSENGRYPENEEIAEAAGLTMKRFTAVMLTPKAPRSLDQKFGIDQSLK 699
            ATYRV+EARKQLYSENGR+P NEE+AEA GL+MKR  AV+LTPKAPRSLDQK GI+Q+LK
Sbjct: 421  ATYRVKEARKQLYSENGRHPNNEEVAEATGLSMKRLNAVLLTPKAPRSLDQKIGINQNLK 480

Query: 698  PSEVIADPEASTSEEILIKQIVKRDLHKVLDSLSAREKQVIKWRFGLGDGRMKTLQEIGL 519
            PSEVIADP+A T+EE+LIKQ ++ DL KVL+SL+ REKQVI+WR+GL DGR KTLQEIG 
Sbjct: 481  PSEVIADPDAETAEELLIKQFMREDLEKVLNSLNPREKQVIRWRYGLEDGRTKTLQEIGE 540

Query: 518  AMGVSRERIRQIESCAFXXXXXXXXXXXXRQHLI 417
             MGVSRERIRQIESCAF            +Q+L+
Sbjct: 541  LMGVSRERIRQIESCAFRKLKNKRRTKHLQQYLV 574


>ref|XP_010278441.1| PREDICTED: RNA polymerase sigma factor sigB-like [Nelumbo nucifera]
          Length = 572

 Score =  519 bits (1336), Expect = e-173
 Identities = 305/580 (52%), Positives = 363/580 (62%), Gaps = 26/580 (4%)
 Frame = -1

Query: 2078 MASLVPPFNCP----SLH-QTHTHQ--------AKNRCPVSFRIQCISAQMTA-----VI 1953
            MA L+P F C     S+H +TH HQ         K R  + FR QCI +  TA     V+
Sbjct: 1    MACLLPQFKCSPDTLSIHFKTHQHQHHYSNNSQLKARDLLCFRTQCILSTTTATMTTTVV 60

Query: 1952 DFEKTQIPGLDAYSSS-------RFLGAFGPPAKTDFKATLPREVLLTGXXXXXXXXXXX 1794
            D EK ++P L+A+  S        ++GA  PP K  F+ATL  E L+TG           
Sbjct: 61   DDEKLRMPSLEAHLISVPADRPLTYIGAIDPPTKAKFEATLATEPLITGDEALIAAAAVE 120

Query: 1793 XXXXXXXXXXXXXXXAQMKGSEASVKFDR-PENFPSKPDMILLERVRLEEMESLGKANDS 1617
                           A M  +  S K D+ P + PS+ D    E  +L E+E +   + S
Sbjct: 121  AVALAKAAVEIAKDAALMVSTNPSSKSDKWPPDIPSELDTYWHETAQLNEIEQVDMVHHS 180

Query: 1616 AIPETEPLEGPIPPSPSEDEGISSLLHNELDLQEMQDSECIXXXXXXXXXXXXXXXXXXX 1437
               E+ P E      P+++E         L L +MQ S+ I                   
Sbjct: 181  LGAESRPKEDSDYLDPTDEE---------LKLLQMQLSKSIAVRSGRQTERRARRARAAE 231

Query: 1436 XXXXXXXXXXXXXXXXXXXXXVHEIDYSDPLRYLRXXXXXXXXXXXXXXXXXSQGIQELI 1257
                                 + ++DYSDPLRYLR                 S+GIQ+L+
Sbjct: 232  KVAANVVAVKSGSSSRKKRSALQDVDYSDPLRYLRGTTSTSRLLTATEELEFSEGIQDLL 291

Query: 1256 KLERLQEELTERNGSPSTFAQWATAAGVDSKTLRKKLNYGKHCKDKMIISNIRLVISIAK 1077
            KLE+L EEL ER G   TFAQWA AAG+D KTLRK+LNYG  CKDKMI SNIRLVISIAK
Sbjct: 292  KLEKLYEELAERYGGQPTFAQWAAAAGIDQKTLRKRLNYGILCKDKMIKSNIRLVISIAK 351

Query: 1076 NFQGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLSDQSRTIRL 897
            N+QGAGMNLQDLVQEGCRGLV+GAEKFDASKGFKFSTYAHWWIKQAVR+SLSDQSRTIRL
Sbjct: 352  NYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRL 411

Query: 896  PFHMVEATYRVREARKQLYSENGRYPENEEIAEAAGLTMKRFTAVMLTPKAPRSLDQKFG 717
            PFHMVEATYRVREARKQLYSENGR+P+NEE+AEA GL+MKR TAV+LTPKAPRSLDQK G
Sbjct: 412  PFHMVEATYRVREARKQLYSENGRHPDNEEVAEATGLSMKRLTAVLLTPKAPRSLDQKIG 471

Query: 716  IDQSLKPSEVIADPEASTSEEILIKQIVKRDLHKVLDSLSAREKQVIKWRFGLGDGRMKT 537
            I+Q+LKPSEVIADP+A T+EE+L+K+ +K+DL KVLDSL+ REKQVI+WRFGL DGRMKT
Sbjct: 472  INQNLKPSEVIADPDAETTEELLMKKFMKQDLEKVLDSLNPREKQVIRWRFGLEDGRMKT 531

Query: 536  LQEIGLAMGVSRERIRQIESCAFXXXXXXXXXXXXRQHLI 417
            LQEIG  MGVSRERIRQIESCAF            +Q+LI
Sbjct: 532  LQEIGELMGVSRERIRQIESCAFRKLKNKKRTKNLQQYLI 571


>ref|XP_010251515.1| PREDICTED: RNA polymerase sigma factor sigB-like isoform X1 [Nelumbo
            nucifera]
          Length = 584

 Score =  513 bits (1321), Expect = e-171
 Identities = 295/567 (52%), Positives = 362/567 (63%), Gaps = 30/567 (5%)
 Frame = -1

Query: 2078 MASLVPPFNCP----SLH------QTHTHQ------AKNRCPVSFRIQCI-----SAQMT 1962
            MA L+P F C     S+H      Q H H       +K+R  +SF+ QC+     +A  T
Sbjct: 1    MACLLPQFKCSPDTISIHFRTHQLQHHKHHHCNNNHSKSRDLLSFQTQCVLSTTTTAMTT 60

Query: 1961 AVIDFEKTQIPGLDAYSSS-------RFLGAFGPPAKTDFKATLPREVLLTGXXXXXXXX 1803
             ++D EK ++P L+++S S        ++GA GPP K  F+ATL  E L+TG        
Sbjct: 61   TLVDVEKLRMPSLESHSISVASDRPLSYIGATGPPTKASFEATLAMESLITGDEALIAAA 120

Query: 1802 XXXXXXXXXXXXXXXXXXAQMKGSEASVKFDR-PENFPSKPDMILLERVRLEEMESLGKA 1626
                              A M   ++S + +  P +F S+  +  LE+ +L E + +G+ 
Sbjct: 121  AAEAVALAKEAVEVAKDAALMVNDKSSSESENGPSDFSSESHIFRLEKAQLTETQEVGRI 180

Query: 1625 NDSA-IPETEPLEGPIPPSPSEDEGISSLLHNELDLQEMQDSECIXXXXXXXXXXXXXXX 1449
            + S  +   +  E  +  S  + +G+ S    E  L +MQ  + I               
Sbjct: 181  DHSVGLESRQEEEQSVQFSNKDSDGLDSS-DEEFKLLQMQLLKSIAVRSGRQTERQARRA 239

Query: 1448 XXXXXXXXXXXXXXXXXXXXXXXXXVHEIDYSDPLRYLRXXXXXXXXXXXXXXXXXSQGI 1269
                                     + +IDYSDPLRYLR                 S+GI
Sbjct: 240  RAMEKASTNVLSVKSGHSSRKRRAALQDIDYSDPLRYLRGTTSTSRLLTATEELELSEGI 299

Query: 1268 QELIKLERLQEELTERNGSPSTFAQWATAAGVDSKTLRKKLNYGKHCKDKMIISNIRLVI 1089
            Q+L+KLE+L EEL ER G   TFAQWA AAGVD KTLRK+LNYG  CKDKMI SNIRLVI
Sbjct: 300  QDLLKLEKLHEELAERCGGQPTFAQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVI 359

Query: 1088 SIAKNFQGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLSDQSR 909
            SIAKN+QGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVR+SLSDQSR
Sbjct: 360  SIAKNYQGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSR 419

Query: 908  TIRLPFHMVEATYRVREARKQLYSENGRYPENEEIAEAAGLTMKRFTAVMLTPKAPRSLD 729
            TIRLPFHMVEATYRVREA+KQLYSENGR+P+NEE+AEA GL+MKR TAV+LTPKAP SLD
Sbjct: 420  TIRLPFHMVEATYRVREAKKQLYSENGRHPDNEEVAEATGLSMKRLTAVLLTPKAPISLD 479

Query: 728  QKFGIDQSLKPSEVIADPEASTSEEILIKQIVKRDLHKVLDSLSAREKQVIKWRFGLGDG 549
            QK G++Q +KPSE+IADP+A T+EE+LIKQ +K+DL KVLDSL+ REKQVI+WRFG+ DG
Sbjct: 480  QKIGMNQDMKPSEIIADPDAETAEELLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDG 539

Query: 548  RMKTLQEIGLAMGVSRERIRQIESCAF 468
            RMKTLQEIG  MGVSRERIRQIESCAF
Sbjct: 540  RMKTLQEIGELMGVSRERIRQIESCAF 566


>ref|XP_009408073.1| PREDICTED: RNA polymerase sigma factor sigB-like [Musa acuminata
            subsp. malaccensis]
          Length = 553

 Score =  508 bits (1309), Expect = e-170
 Identities = 293/552 (53%), Positives = 346/552 (62%), Gaps = 15/552 (2%)
 Frame = -1

Query: 2078 MASLVPPFNCPSLHQTHTHQA------KNRCPVSFRIQCISAQMTAVIDFEKTQIPGLDA 1917
            MA LVP F  P     H+  +      K R  V  +++C+ +  TA+IDFE  QIP L+A
Sbjct: 1    MACLVPQFKPPPTSDAHSRLSLPSLHPKARESVWSQVRCVLSPKTALIDFE--QIPKLEA 58

Query: 1916 YSSS---------RFLGAFGPPAKTDFKATLPREVLLTGXXXXXXXXXXXXXXXXXXXXX 1764
             S+S          + GA G P KT F+AT   E LLT                      
Sbjct: 59   RSTSLSTCAIKPLTYTGAVGLPTKTSFEATWASEALLTNEEAVIAAAAAEAVALARAALE 118

Query: 1763 XXXXXAQMKGSEASVKFDRPENFPSKPDMILLERVRLEEMESLGKANDSAIPETEPLEGP 1584
                 AQM     S +               +E V L + E  G  N S   ET  LE  
Sbjct: 119  LAKDAAQMIRKSPSAE---------------VENVNLSKTEWTGMTNHSVATETTSLEDS 163

Query: 1583 IPPSPSEDEGISSLLHNELDLQEMQDSECIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1404
            +    S  + ISS  +NE +++E +    I                              
Sbjct: 164  VTLDESVRKDISSSTYNETEVEETEYCGNIAVRSGRQTERRARRARAAEKAAAGVLNLKS 223

Query: 1403 XXXXXXXXXXVHEIDYSDPLRYLRXXXXXXXXXXXXXXXXXSQGIQELIKLERLQEELTE 1224
                      + EIDYSDPL YLR                 S+GIQ+L+KLERLQ++LTE
Sbjct: 224  GSSGKKKRSTLQEIDYSDPLHYLRGTTSTSRLLTAAEEVELSEGIQDLLKLERLQQDLTE 283

Query: 1223 RNGSPSTFAQWATAAGVDSKTLRKKLNYGKHCKDKMIISNIRLVISIAKNFQGAGMNLQD 1044
            RNG   TFAQWA AAG+D K LRK+LNYG  CKDKMI SNIRLVISIAKN+Q AGMNLQD
Sbjct: 284  RNGCQPTFAQWAAAAGIDQKVLRKRLNYGTFCKDKMITSNIRLVISIAKNYQHAGMNLQD 343

Query: 1043 LVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLSDQSRTIRLPFHMVEATYRV 864
            LVQEGCRGL+KGAEKFDASKGFKFSTYAHWWIKQAVR+SLS+QSRTIRLPFHMVEATYRV
Sbjct: 344  LVQEGCRGLIKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSEQSRTIRLPFHMVEATYRV 403

Query: 863  REARKQLYSENGRYPENEEIAEAAGLTMKRFTAVMLTPKAPRSLDQKFGIDQSLKPSEVI 684
            REA+KQLYSENGR+P++EE+AEA+GL+MKRF AVMLTPKAPRSLDQK GI+Q+LKPSEVI
Sbjct: 404  REAKKQLYSENGRHPDHEEVAEASGLSMKRFAAVMLTPKAPRSLDQKIGINQTLKPSEVI 463

Query: 683  ADPEASTSEEILIKQIVKRDLHKVLDSLSAREKQVIKWRFGLGDGRMKTLQEIGLAMGVS 504
            ADP+A TSE+ILIKQ ++ DL+KVLD+L+ REK+V++WRFGL DGRMKTLQEIG  MGVS
Sbjct: 464  ADPDAETSEDILIKQFMREDLNKVLDTLNPREKRVVRWRFGLEDGRMKTLQEIGELMGVS 523

Query: 503  RERIRQIESCAF 468
            RERIRQIE CAF
Sbjct: 524  RERIRQIEFCAF 535


>ref|XP_017977747.1| PREDICTED: RNA polymerase sigma factor sigB isoform X2 [Theobroma
            cacao]
          Length = 579

 Score =  507 bits (1306), Expect = e-169
 Identities = 288/558 (51%), Positives = 343/558 (61%), Gaps = 21/558 (3%)
 Frame = -1

Query: 2078 MASLVPPFNCP------SLHQTHTHQAKNRCPVSFRIQCI--------SAQMTAVIDFEK 1941
            M+ L+P F C            H+H +K++  + FR QC+        S   TAV+D EK
Sbjct: 1    MSCLLPQFKCQPDTFSIQFRTHHSHHSKHKEHICFRTQCVLSTTSSSTSTTATAVLDVEK 60

Query: 1940 TQIPGLDAYSSS-------RFLGAFGPPAKTDFKATLPREVLLTGXXXXXXXXXXXXXXX 1782
             ++P  +A+ +S        ++GA GPP++    ATL  + LLT                
Sbjct: 61   LRLPSFEAHPNSVAVDRPWTYIGATGPPSEASLGATLATDNLLTSDEAIIAAAAAEAVAL 120

Query: 1781 XXXXXXXXXXXAQMKGSEASVKFDRPENFPSKPDMILLERVRLEEMESLGKANDSAIPET 1602
                       A M  +    K +         D    +     E E  G   DS   E+
Sbjct: 121  ARAAVKVAKDAALMAENYNYAKTEMKSGVSFATDSFTSKWALFTEAERAGIIGDSPTDES 180

Query: 1601 EPLEGPIPPSPSEDEGISSLLHNELDLQEMQDSECIXXXXXXXXXXXXXXXXXXXXXXXX 1422
            E  E     + + +       + EL+  E Q S  I                        
Sbjct: 181  EMEEDDSEQNSTTESDELEPTNEELERLEEQLSRSIAVRSRRQTERKAKRTRAAEKAAAN 240

Query: 1421 XXXXXXXXXXXXXXXXVHEIDYSDPLRYLRXXXXXXXXXXXXXXXXXSQGIQELIKLERL 1242
                            + ++DYSDPLRYLR                 S+GIQ+L+KLERL
Sbjct: 241  VVSVKSGSTNRKRRGALQDVDYSDPLRYLRGTTSTSRLLTANEELELSEGIQDLLKLERL 300

Query: 1241 QEELTERNGSPSTFAQWATAAGVDSKTLRKKLNYGKHCKDKMIISNIRLVISIAKNFQGA 1062
            QEEL ER G   TFAQWA AAGVD KTLR +LNYG HCKDKMI SNIRLVISIAKN+QGA
Sbjct: 301  QEELAERCGGQPTFAQWAAAAGVDQKTLRSRLNYGVHCKDKMIKSNIRLVISIAKNYQGA 360

Query: 1061 GMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLSDQSRTIRLPFHMV 882
            GMNLQDLVQEGCRGLV+GAEKFDASKGFKFSTYAHWWIKQAVR+SLSDQSRTIRLPFHMV
Sbjct: 361  GMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMV 420

Query: 881  EATYRVREARKQLYSENGRYPENEEIAEAAGLTMKRFTAVMLTPKAPRSLDQKFGIDQSL 702
            EATYRV+EARKQLYSENGR+P+NEE+AEA GL+MKR TAV+LTPKAPRSLDQK GI+Q+L
Sbjct: 421  EATYRVKEARKQLYSENGRHPDNEEVAEATGLSMKRLTAVLLTPKAPRSLDQKIGINQNL 480

Query: 701  KPSEVIADPEASTSEEILIKQIVKRDLHKVLDSLSAREKQVIKWRFGLGDGRMKTLQEIG 522
            KPSEVIADPEA T+E++LIKQ +++DL KVLDSLS RE+QVI+WRFG+ DGRMKTLQEIG
Sbjct: 481  KPSEVIADPEAETAEDMLIKQFMRKDLEKVLDSLSQRERQVIRWRFGMEDGRMKTLQEIG 540

Query: 521  LAMGVSRERIRQIESCAF 468
              MGVSRERIRQIESCAF
Sbjct: 541  ELMGVSRERIRQIESCAF 558


>ref|XP_021283422.1| RNA polymerase sigma factor sigB [Herrania umbratica]
          Length = 579

 Score =  506 bits (1304), Expect = e-168
 Identities = 288/558 (51%), Positives = 343/558 (61%), Gaps = 21/558 (3%)
 Frame = -1

Query: 2078 MASLVPPFNCP------SLHQTHTHQAKNRCPVSFRIQCI--------SAQMTAVIDFEK 1941
            M+ L+P F C            H+H +K++  + FR QC+        SA  TAV+D EK
Sbjct: 1    MSCLLPQFKCQPDTFSIQFRTHHSHHSKHKEHICFRTQCVLSTTSSSTSAMTTAVLDVEK 60

Query: 1940 TQIPGLDAYSSS-------RFLGAFGPPAKTDFKATLPREVLLTGXXXXXXXXXXXXXXX 1782
             ++P  +A+ +S        ++GA GPP++    ATL  E LLT                
Sbjct: 61   LRLPSFEAHPNSVAADRPWTYIGATGPPSEASLAATLATENLLTSDEAVIAAAAAESVAL 120

Query: 1781 XXXXXXXXXXXAQMKGSEASVKFDRPENFPSKPDMILLERVRLEEMESLGKANDSAIPET 1602
                       A M  +    K +      S  D    +     E E  G   DS   E+
Sbjct: 121  ARAAVKVAKDAALMAKNYNYAKTEMKSGVSSATDTFTSKWALFTEAERAGIIGDSPTDES 180

Query: 1601 EPLEGPIPPSPSEDEGISSLLHNELDLQEMQDSECIXXXXXXXXXXXXXXXXXXXXXXXX 1422
            E  E     + + +       + EL+L E Q S  I                        
Sbjct: 181  EMEEDDSEQNATTESDELEPTNEELELLEEQLSRSIIVRSRRQTERKAKRTRAAEKAAVN 240

Query: 1421 XXXXXXXXXXXXXXXXVHEIDYSDPLRYLRXXXXXXXXXXXXXXXXXSQGIQELIKLERL 1242
                            + ++DYSDPL YLR                 S+GIQ+L+KLERL
Sbjct: 241  VVSVKSGSTNRKKRGALQDVDYSDPLHYLRVTTSTSRLLTANEELELSEGIQDLLKLERL 300

Query: 1241 QEELTERNGSPSTFAQWATAAGVDSKTLRKKLNYGKHCKDKMIISNIRLVISIAKNFQGA 1062
            QEEL ER G   TFAQWA AAGVD KTLR +LNYG  CKDKMI SNIRLVISIAKN+QGA
Sbjct: 301  QEELAERCGGQPTFAQWAAAAGVDQKTLRSRLNYGVLCKDKMIKSNIRLVISIAKNYQGA 360

Query: 1061 GMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLSDQSRTIRLPFHMV 882
            GMNLQDLVQEGCRGL++GAEKFDASKGFKFSTYAHWWIKQAVR+SLSDQSRTIRLPFHMV
Sbjct: 361  GMNLQDLVQEGCRGLIRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMV 420

Query: 881  EATYRVREARKQLYSENGRYPENEEIAEAAGLTMKRFTAVMLTPKAPRSLDQKFGIDQSL 702
            EATYRVREARK LYSENGR+P+NEE+A+A GL+MKR TAV+LTPKAPRSLDQK GI+Q+L
Sbjct: 421  EATYRVREARKHLYSENGRHPDNEEVAKATGLSMKRLTAVLLTPKAPRSLDQKIGINQNL 480

Query: 701  KPSEVIADPEASTSEEILIKQIVKRDLHKVLDSLSAREKQVIKWRFGLGDGRMKTLQEIG 522
            KPSEVIADPEA T+E++LIKQ +++DL KVLDSLS RE+QVI+WRFG+ DGRMKTLQEIG
Sbjct: 481  KPSEVIADPEAETAEDMLIKQFMRKDLEKVLDSLSQRERQVIRWRFGMEDGRMKTLQEIG 540

Query: 521  LAMGVSRERIRQIESCAF 468
              MGVSRERIRQIESCAF
Sbjct: 541  ELMGVSRERIRQIESCAF 558


>ref|XP_010052665.1| PREDICTED: RNA polymerase sigma factor sigB isoform X2 [Eucalyptus
            grandis]
 gb|KCW76739.1| hypothetical protein EUGRSUZ_D01094 [Eucalyptus grandis]
          Length = 588

 Score =  504 bits (1299), Expect = e-168
 Identities = 290/560 (51%), Positives = 341/560 (60%), Gaps = 20/560 (3%)
 Frame = -1

Query: 2087 QEKMASLVPPFNC-PSLH--QTHTHQAKNRCPVSFRIQCI----------SAQMTAVIDF 1947
            Q   + L+P F C P     Q  TH  KNR    FR QC+          SA    V+D 
Sbjct: 11   QRMSSCLLPQFKCQPDTFSIQFRTHAQKNRETTYFRAQCLLSATSPSTLSSAATAVVLDM 70

Query: 1946 EKTQIPGLDAYSSS-------RFLGAFGPPAKTDFKATLPREVLLTGXXXXXXXXXXXXX 1788
            EK ++P L+  + S        + GA GPPA+ +  ATL  E LLT              
Sbjct: 71   EKLRLPSLEVLTDSPTSNRPWTYTGAVGPPAEVNLGATLATETLLTSDEAVIAAAASEAV 130

Query: 1787 XXXXXXXXXXXXXAQMKGSEASVKFDRPENFPSKPDMILLERVRLEEMESLGKANDSAIP 1608
                         A M  +E+S   D      S+    L +   L E+E      +   P
Sbjct: 131  TLAKAALKSAKHAALMIRNESSSNIDNKLELSSRTSTSLSKHAELLELEHSNILTELMEP 190

Query: 1607 ETEPLEGPIPPSPSEDEGISSLLHNELDLQEMQDSECIXXXXXXXXXXXXXXXXXXXXXX 1428
            E    EG +    ++        H EL L ++Q  + I                      
Sbjct: 191  EGGLREGNVMQYSTDKSEDLEPTHEELQLLQVQLFKSIAVRSRRQTERKEIRERAAEKAA 250

Query: 1427 XXXXXXXXXXXXXXXXXXVHEIDYSDPLRYLRXXXXXXXXXXXXXXXXXSQGIQELIKLE 1248
                              + E+DYSDPLRYLR                 S+GIQ+L+KLE
Sbjct: 251  ANVVSVKSGSLSKKKRAALQEVDYSDPLRYLRGTTSSSRLLTATEETELSEGIQDLLKLE 310

Query: 1247 RLQEELTERNGSPSTFAQWATAAGVDSKTLRKKLNYGKHCKDKMIISNIRLVISIAKNFQ 1068
            RLQ ELTER G    FAQWA AAGVD KTLRK+LNYG+ CKDKMI SNIRLVISIAKN+Q
Sbjct: 311  RLQVELTERCGGEPAFAQWAAAAGVDQKTLRKRLNYGRLCKDKMIKSNIRLVISIAKNYQ 370

Query: 1067 GAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLSDQSRTIRLPFH 888
            GAGMNLQDLVQEGCRGLV+G EKFDASKGFKFSTYAHWWIKQAVR+SLSDQSRTIRLPFH
Sbjct: 371  GAGMNLQDLVQEGCRGLVRGCEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFH 430

Query: 887  MVEATYRVREARKQLYSENGRYPENEEIAEAAGLTMKRFTAVMLTPKAPRSLDQKFGIDQ 708
            MVEATYRV+EARKQLYSENGR P+NEE+AEA GL+MKR  AV++TPKAPRSLDQK GI+Q
Sbjct: 431  MVEATYRVKEARKQLYSENGRQPDNEEVAEATGLSMKRLNAVLMTPKAPRSLDQKIGINQ 490

Query: 707  SLKPSEVIADPEASTSEEILIKQIVKRDLHKVLDSLSAREKQVIKWRFGLGDGRMKTLQE 528
            +LKPSEVIADP A TSE++L+KQ +++DL KVLD+L+ REKQV++WRFGL DGRMKTLQE
Sbjct: 491  NLKPSEVIADPNAETSEDVLLKQFMRQDLEKVLDTLNPREKQVVRWRFGLEDGRMKTLQE 550

Query: 527  IGLAMGVSRERIRQIESCAF 468
            IG  MGVSRERIRQIESCAF
Sbjct: 551  IGELMGVSRERIRQIESCAF 570


>ref|XP_017977746.1| PREDICTED: RNA polymerase sigma factor sigB isoform X1 [Theobroma
            cacao]
          Length = 586

 Score =  501 bits (1289), Expect = e-166
 Identities = 288/565 (50%), Positives = 343/565 (60%), Gaps = 28/565 (4%)
 Frame = -1

Query: 2078 MASLVPPFNCP------SLHQTHTHQAKNRCPVSFRIQCI--------SAQMTAVIDFEK 1941
            M+ L+P F C            H+H +K++  + FR QC+        S   TAV+D EK
Sbjct: 1    MSCLLPQFKCQPDTFSIQFRTHHSHHSKHKEHICFRTQCVLSTTSSSTSTTATAVLDVEK 60

Query: 1940 TQIPGLDAYSSS-------RFLGAFGPPA-------KTDFKATLPREVLLTGXXXXXXXX 1803
             ++P  +A+ +S        ++GA GPP+       +    ATL  + LLT         
Sbjct: 61   LRLPSFEAHPNSVAVDRPWTYIGATGPPSEVSLLRLRASLGATLATDNLLTSDEAIIAAA 120

Query: 1802 XXXXXXXXXXXXXXXXXXAQMKGSEASVKFDRPENFPSKPDMILLERVRLEEMESLGKAN 1623
                              A M  +    K +         D    +     E E  G   
Sbjct: 121  AAEAVALARAAVKVAKDAALMAENYNYAKTEMKSGVSFATDSFTSKWALFTEAERAGIIG 180

Query: 1622 DSAIPETEPLEGPIPPSPSEDEGISSLLHNELDLQEMQDSECIXXXXXXXXXXXXXXXXX 1443
            DS   E+E  E     + + +       + EL+  E Q S  I                 
Sbjct: 181  DSPTDESEMEEDDSEQNSTTESDELEPTNEELERLEEQLSRSIAVRSRRQTERKAKRTRA 240

Query: 1442 XXXXXXXXXXXXXXXXXXXXXXXVHEIDYSDPLRYLRXXXXXXXXXXXXXXXXXSQGIQE 1263
                                   + ++DYSDPLRYLR                 S+GIQ+
Sbjct: 241  AEKAAANVVSVKSGSTNRKRRGALQDVDYSDPLRYLRGTTSTSRLLTANEELELSEGIQD 300

Query: 1262 LIKLERLQEELTERNGSPSTFAQWATAAGVDSKTLRKKLNYGKHCKDKMIISNIRLVISI 1083
            L+KLERLQEEL ER G   TFAQWA AAGVD KTLR +LNYG HCKDKMI SNIRLVISI
Sbjct: 301  LLKLERLQEELAERCGGQPTFAQWAAAAGVDQKTLRSRLNYGVHCKDKMIKSNIRLVISI 360

Query: 1082 AKNFQGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLSDQSRTI 903
            AKN+QGAGMNLQDLVQEGCRGLV+GAEKFDASKGFKFSTYAHWWIKQAVR+SLSDQSRTI
Sbjct: 361  AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTI 420

Query: 902  RLPFHMVEATYRVREARKQLYSENGRYPENEEIAEAAGLTMKRFTAVMLTPKAPRSLDQK 723
            RLPFHMVEATYRV+EARKQLYSENGR+P+NEE+AEA GL+MKR TAV+LTPKAPRSLDQK
Sbjct: 421  RLPFHMVEATYRVKEARKQLYSENGRHPDNEEVAEATGLSMKRLTAVLLTPKAPRSLDQK 480

Query: 722  FGIDQSLKPSEVIADPEASTSEEILIKQIVKRDLHKVLDSLSAREKQVIKWRFGLGDGRM 543
             GI+Q+LKPSEVIADPEA T+E++LIKQ +++DL KVLDSLS RE+QVI+WRFG+ DGRM
Sbjct: 481  IGINQNLKPSEVIADPEAETAEDMLIKQFMRKDLEKVLDSLSQRERQVIRWRFGMEDGRM 540

Query: 542  KTLQEIGLAMGVSRERIRQIESCAF 468
            KTLQEIG  MGVSRERIRQIESCAF
Sbjct: 541  KTLQEIGELMGVSRERIRQIESCAF 565


>gb|OMP03365.1| RNA polymerase sigma-70 [Corchorus capsularis]
          Length = 576

 Score =  498 bits (1283), Expect = e-165
 Identities = 288/574 (50%), Positives = 347/574 (60%), Gaps = 20/574 (3%)
 Frame = -1

Query: 2078 MASLVPPFNCP------SLHQTHTHQAKNRCPVSFRIQCI--------SAQMTAVIDFEK 1941
            M+ L+P F C            H+H +K++  + FR QC+        S   TAV+D EK
Sbjct: 1    MSCLLPQFKCQPDTFSIQFRTHHSHHSKHKESICFRTQCVLSTSSPSTSTATTAVLDLEK 60

Query: 1940 TQIPGLDAYSSSR------FLGAFGPPAKTDFKATLPREVLLTGXXXXXXXXXXXXXXXX 1779
             ++P  +A  +S       + GA GPP++  F A+L  E LL                  
Sbjct: 61   LRLPSFEAQPNSVVADRPWYRGATGPPSEASFGASLTTENLLKSDDAVIASAAAEAVALA 120

Query: 1778 XXXXXXXXXXAQMKGSEASVKFDRPENFPSKPDMILLERVRLEEMESLGKANDSAIPETE 1599
                      A M  S  S K +      S  D +  +     E E  G   DS   E++
Sbjct: 121  RAAVKVAKDAALMAKSFNSSKIEMKSTVSSATDTLTSKWALFTEAERAGIVGDSPTNESD 180

Query: 1598 PLEGPIPPSPSEDEGISSLLHNELDLQEMQDSECIXXXXXXXXXXXXXXXXXXXXXXXXX 1419
              +     +   D+      + EL+  E Q S  I                         
Sbjct: 181  EDDSEEKSTTESDK--LEPTNEELEYLEEQLSRSIAVRSRRQTERKAKRTRAAEKASSNA 238

Query: 1418 XXXXXXXXXXXXXXXVHEIDYSDPLRYLRXXXXXXXXXXXXXXXXXSQGIQELIKLERLQ 1239
                           + E+DYSDPLRYLR                 S+GIQ+L+KLERL+
Sbjct: 239  VSLRSGSNSRKKRGALQEVDYSDPLRYLRGTTSTSRLLTANEELELSEGIQDLLKLERLE 298

Query: 1238 EELTERNGSPSTFAQWATAAGVDSKTLRKKLNYGKHCKDKMIISNIRLVISIAKNFQGAG 1059
            EEL ER G   TF+QWA AAGVD KTLR++LNYG  CKDKMI SNIRLVISIAKN+QGAG
Sbjct: 299  EELRERCGGQPTFSQWAAAAGVDQKTLRRRLNYGILCKDKMIKSNIRLVISIAKNYQGAG 358

Query: 1058 MNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLSDQSRTIRLPFHMVE 879
            MNLQDLVQEGCRGLV+GAEKFDASKGFKFSTYAHWWIKQAVR+SLSDQSRTIRLPFHMVE
Sbjct: 359  MNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVE 418

Query: 878  ATYRVREARKQLYSENGRYPENEEIAEAAGLTMKRFTAVMLTPKAPRSLDQKFGIDQSLK 699
            ATYRV+EA+KQLYSENGR+P+NEE+AEA GL+MKR  AV+LTPKAPRSLDQK GI+Q+LK
Sbjct: 419  ATYRVKEAKKQLYSENGRHPDNEEVAEATGLSMKRLHAVLLTPKAPRSLDQKIGINQNLK 478

Query: 698  PSEVIADPEASTSEEILIKQIVKRDLHKVLDSLSAREKQVIKWRFGLGDGRMKTLQEIGL 519
            PSEVIADPEA T+E+IL+KQ +K+DL KVLDSL  RE+QVI+WRFG+ DGRMKTLQEIG 
Sbjct: 479  PSEVIADPEADTAEDILLKQFMKKDLEKVLDSLGQRERQVIRWRFGMEDGRMKTLQEIGE 538

Query: 518  AMGVSRERIRQIESCAFXXXXXXXXXXXXRQHLI 417
             MGVSRERIRQIESCAF            +Q+L+
Sbjct: 539  LMGVSRERIRQIESCAFRKMKNKKRTKNLQQYLV 572


>ref|XP_010052664.1| PREDICTED: RNA polymerase sigma factor sigB isoform X1 [Eucalyptus
            grandis]
          Length = 601

 Score =  497 bits (1280), Expect = e-165
 Identities = 286/557 (51%), Positives = 337/557 (60%), Gaps = 25/557 (4%)
 Frame = -1

Query: 2063 PPFNCPSLHQTHTHQ--------AKNRCPVSFRIQCI----------SAQMTAVIDFEKT 1938
            P    P+ H  H+ Q         KNR    FR QC+          SA    V+D EK 
Sbjct: 27   PAVQVPAGHLLHSVQDARPNCFAEKNRETTYFRAQCLLSATSPSTLSSAATAVVLDMEKL 86

Query: 1937 QIPGLDAYSSS-------RFLGAFGPPAKTDFKATLPREVLLTGXXXXXXXXXXXXXXXX 1779
            ++P L+  + S        + GA GPPA+ +  ATL  E LLT                 
Sbjct: 87   RLPSLEVLTDSPTSNRPWTYTGAVGPPAEVNLGATLATETLLTSDEAVIAAAASEAVTLA 146

Query: 1778 XXXXXXXXXXAQMKGSEASVKFDRPENFPSKPDMILLERVRLEEMESLGKANDSAIPETE 1599
                      A M  +E+S   D      S+    L +   L E+E      +   PE  
Sbjct: 147  KAALKSAKHAALMIRNESSSNIDNKLELSSRTSTSLSKHAELLELEHSNILTELMEPEGG 206

Query: 1598 PLEGPIPPSPSEDEGISSLLHNELDLQEMQDSECIXXXXXXXXXXXXXXXXXXXXXXXXX 1419
              EG +    ++        H EL L ++Q  + I                         
Sbjct: 207  LREGNVMQYSTDKSEDLEPTHEELQLLQVQLFKSIAVRSRRQTERKEIRERAAEKAAANV 266

Query: 1418 XXXXXXXXXXXXXXXVHEIDYSDPLRYLRXXXXXXXXXXXXXXXXXSQGIQELIKLERLQ 1239
                           + E+DYSDPLRYLR                 S+GIQ+L+KLERLQ
Sbjct: 267  VSVKSGSLSKKKRAALQEVDYSDPLRYLRGTTSSSRLLTATEETELSEGIQDLLKLERLQ 326

Query: 1238 EELTERNGSPSTFAQWATAAGVDSKTLRKKLNYGKHCKDKMIISNIRLVISIAKNFQGAG 1059
             ELTER G    FAQWA AAGVD KTLRK+LNYG+ CKDKMI SNIRLVISIAKN+QGAG
Sbjct: 327  VELTERCGGEPAFAQWAAAAGVDQKTLRKRLNYGRLCKDKMIKSNIRLVISIAKNYQGAG 386

Query: 1058 MNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLSDQSRTIRLPFHMVE 879
            MNLQDLVQEGCRGLV+G EKFDASKGFKFSTYAHWWIKQAVR+SLSDQSRTIRLPFHMVE
Sbjct: 387  MNLQDLVQEGCRGLVRGCEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVE 446

Query: 878  ATYRVREARKQLYSENGRYPENEEIAEAAGLTMKRFTAVMLTPKAPRSLDQKFGIDQSLK 699
            ATYRV+EARKQLYSENGR P+NEE+AEA GL+MKR  AV++TPKAPRSLDQK GI+Q+LK
Sbjct: 447  ATYRVKEARKQLYSENGRQPDNEEVAEATGLSMKRLNAVLMTPKAPRSLDQKIGINQNLK 506

Query: 698  PSEVIADPEASTSEEILIKQIVKRDLHKVLDSLSAREKQVIKWRFGLGDGRMKTLQEIGL 519
            PSEVIADP A TSE++L+KQ +++DL KVLD+L+ REKQV++WRFGL DGRMKTLQEIG 
Sbjct: 507  PSEVIADPNAETSEDVLLKQFMRQDLEKVLDTLNPREKQVVRWRFGLEDGRMKTLQEIGE 566

Query: 518  AMGVSRERIRQIESCAF 468
             MGVSRERIRQIESCAF
Sbjct: 567  LMGVSRERIRQIESCAF 583


>ref|XP_015895073.1| PREDICTED: RNA polymerase sigma factor sigB [Ziziphus jujuba]
          Length = 573

 Score =  494 bits (1273), Expect = e-164
 Identities = 287/572 (50%), Positives = 350/572 (61%), Gaps = 18/572 (3%)
 Frame = -1

Query: 2078 MASLVPPFNC-PSLHQTH--THQAKNRCPVSFRIQCI--------SAQMTAVIDFEKTQI 1932
            M+ L+P F C P     H  TH  K R  +S    CI        S   T V++ EK ++
Sbjct: 1    MSCLLPQFKCQPDTFSIHFRTHLPKPRDSISSWPHCILSTSSPSTSMATTTVLNLEKLRL 60

Query: 1931 PGLDAYSSS-------RFLGAFGPPAKTDFKATLPREVLLTGXXXXXXXXXXXXXXXXXX 1773
            P LDA S S        + GA GPPAK + +ATL  E LLT                   
Sbjct: 61   PSLDANSDSVTANRPWTYTGAIGPPAKANLEATLATETLLTSEEAVIAAAAAEAVTLAKA 120

Query: 1772 XXXXXXXXAQMKGSEASVKFDRPENFPSKPDMILLERVRLEEMESLGKANDSAIPETEPL 1593
                      +  +    + +    F  + D + L+  +  +     +  DS  P+T  L
Sbjct: 121  AVKVAKDATLLINNNPCTRAESTSLFSPEDDALHLKWPQHMKTGQPVRLGDSMGPKTAQL 180

Query: 1592 EGPIPPSPSEDEGISSLLHNELDLQEMQDSECIXXXXXXXXXXXXXXXXXXXXXXXXXXX 1413
            +        ++       H EL+L + Q S  I                           
Sbjct: 181  DDYSMQCAIKEADDLEPTHEELELLQSQLSNGIAVRSRRQTERKARRTRAAEKAAATVVS 240

Query: 1412 XXXXXXXXXXXXXVHEIDYSDPLRYLRXXXXXXXXXXXXXXXXXSQGIQELIKLERLQEE 1233
                         + +ID+SDPLRYLR                 S+GIQ+L+KLE+LQEE
Sbjct: 241  VKSGSTVRKKRASLQDIDHSDPLRYLRATTSTSRLLTATEEIELSEGIQDLLKLEKLQEE 300

Query: 1232 LTERNGSPSTFAQWATAAGVDSKTLRKKLNYGKHCKDKMIISNIRLVISIAKNFQGAGMN 1053
            LTER GS  TFAQWA AAGVD KTLR+++NYG  CKDKMI SNIRLVISIAKN+QGAGMN
Sbjct: 301  LTERCGSQPTFAQWAAAAGVDQKTLRRRINYGILCKDKMIKSNIRLVISIAKNYQGAGMN 360

Query: 1052 LQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLSDQSRTIRLPFHMVEAT 873
            LQDLVQEGCRGLV+GAEKFDASKGFKFSTYAHWWIKQAVR+SLSDQSRTIRLPFHMVEAT
Sbjct: 361  LQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEAT 420

Query: 872  YRVREARKQLYSENGRYPENEEIAEAAGLTMKRFTAVMLTPKAPRSLDQKFGIDQSLKPS 693
            YRV+EARKQLYS+NGR+P++EE+AEA GL+MKR  AV+LTPKAPRSL+QK GI+Q+LKPS
Sbjct: 421  YRVKEARKQLYSKNGRHPDDEEVAEATGLSMKRLAAVLLTPKAPRSLEQKIGINQNLKPS 480

Query: 692  EVIADPEASTSEEILIKQIVKRDLHKVLDSLSAREKQVIKWRFGLGDGRMKTLQEIGLAM 513
            EVIADP+A TSE++LI++ +K+DL KVLDSL+ REKQVI+WRFG+ DGRMKTLQEIG  M
Sbjct: 481  EVIADPDAETSEDVLIRKFMKQDLDKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGELM 540

Query: 512  GVSRERIRQIESCAFXXXXXXXXXXXXRQHLI 417
            GVSRERIRQIESCAF            +Q+L+
Sbjct: 541  GVSRERIRQIESCAFRKLKNKKRTKHLQQYLV 572


>gb|EOY10370.1| RNApolymerase sigma subunit 2 [Theobroma cacao]
          Length = 623

 Score =  490 bits (1262), Expect = e-161
 Identities = 282/540 (52%), Positives = 333/540 (61%), Gaps = 23/540 (4%)
 Frame = -1

Query: 2018 AKNRCPVSFRIQCI--------SAQMTAVIDFEKTQIPGLDAYSSS-------RFLGAFG 1884
            AK++  + FR QC+        S   TAV+D EK ++P  +A+ +S        ++GA G
Sbjct: 63   AKHKEHICFRTQCVLSTTSSSTSTTATAVLDVEKLRLPSFEAHPNSVAVDRPWTYIGATG 122

Query: 1883 PPAKTDFKATLPREVLLTGXXXXXXXXXXXXXXXXXXXXXXXXXXAQMKGSEASVKFDRP 1704
            PP++    ATL  + LLT                           A M  +    K +  
Sbjct: 123  PPSEASLGATLATDNLLTSDEAVIAAAAAEAVALARAAVKVAKDAALMAENYNYAKTEMK 182

Query: 1703 ENFPSKPDMILLERVRLEEMESLGKANDSAIPETEPLEGPIPPSPSEDEGISSLLHNELD 1524
                   D    +     E E  G   DS   E+E  E     + + +       + EL+
Sbjct: 183  SGVSFATDSFTSKWALFTEAERAGIIGDSPTDESEMEEDDSEQNSTTESDELEPTNEELE 242

Query: 1523 LQEMQDSECIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHEIDYSDPL 1344
              E Q S  I                                        + ++DYSDPL
Sbjct: 243  HLEEQLSRSIAVRSRRQTERKAKRTRAAEKAAANVVSVKSGSTNRKRRGALQDVDYSDPL 302

Query: 1343 RYLRXXXXXXXXXXXXXXXXXSQGIQELIKLERLQEELTERNGSPSTFAQWATAAGVDSK 1164
            RYLR                 S+GIQ+L+KLERLQEEL ER G   TFAQWA AAGVD K
Sbjct: 303  RYLRGTTSTSRLLTANEELELSEGIQDLLKLERLQEELAERCGGQPTFAQWAAAAGVDQK 362

Query: 1163 TLRKKLNYGKHCKDKMIISNIRLVISIAKNFQGAGMNLQDLVQEGCRGLVKGAEKFDASK 984
            TLR +LNYG HCKDKMI SNIRLVISIAKN+QGAGMNLQDLVQEGCRGLV+GAEKFDASK
Sbjct: 363  TLRSRLNYGVHCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASK 422

Query: 983  GFKFSTYAHWWIKQAVRRSLSDQSRTIRLPFHMVEATYRVREARKQLYSENGRYPENEEI 804
            GFKFSTYAHWWIKQAVR+SLSDQSRTIRLPFHMVEATYRV+EARKQLYSENGR+P+NEE+
Sbjct: 423  GFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDNEEV 482

Query: 803  AEAAGLTMKRFTAVMLTPKAPRSLDQKFGIDQSLKPS--------EVIADPEASTSEEIL 648
            AEA GL+MKR TAV+LTPKAPRSLDQK GI+Q+LKPS        EVIADPEA T+E++L
Sbjct: 483  AEATGLSMKRLTAVLLTPKAPRSLDQKIGINQNLKPSVCPVSSLAEVIADPEAETAEDML 542

Query: 647  IKQIVKRDLHKVLDSLSAREKQVIKWRFGLGDGRMKTLQEIGLAMGVSRERIRQIESCAF 468
            IKQ +++DL KVLDSLS RE+QVI+WRFG+ DGRMKTLQEIG  MGVSRERIRQIESCAF
Sbjct: 543  IKQFMRKDLEKVLDSLSQRERQVIRWRFGMEDGRMKTLQEIGELMGVSRERIRQIESCAF 602


>ref|XP_018817643.1| PREDICTED: RNA polymerase sigma factor sigB isoform X2 [Juglans
            regia]
          Length = 585

 Score =  488 bits (1257), Expect = e-161
 Identities = 286/585 (48%), Positives = 353/585 (60%), Gaps = 30/585 (5%)
 Frame = -1

Query: 2078 MASLVPPFNCP-------------SLHQTHTH--QAKNRCPVSFRIQCI--------SAQ 1968
            M+ L+P F C              S+  TH+H    K+R  +  R QCI        S  
Sbjct: 1    MSCLLPQFKCHPDTFSIQFRTHQHSVSTTHSHPQNEKSRDRIDIRAQCILSTTSFSTSIG 60

Query: 1967 MTAVIDFEKTQIPGL----DAYSSSR---FLGAFGPPAKTDFKATLPREVLLTGXXXXXX 1809
             TAV++  K ++P L    D +++++   ++GA GPP +  F+ATL  E L+T       
Sbjct: 61   STAVLNMGKLRLPSLETDSDPFTTNKPWTYMGAVGPPTEAKFEATLATETLITSEEAVIA 120

Query: 1808 XXXXXXXXXXXXXXXXXXXXAQMKGSEASVKFDRPENFPSKPDMILLERVRLEEMESLGK 1629
                                A +  +  S K D   +   + D++    V+  + +    
Sbjct: 121  AAAAEAVTLAKAAVKFAKDAAMLVNNNHSEKADTRSSVSFEADVLHFNWVQPVKTDRAAI 180

Query: 1628 ANDSAIPETEPLEGPIPPSPSEDEGISSLLHNELDLQEMQDSECIXXXXXXXXXXXXXXX 1449
              D   PE   LE       +++         ELDL + Q S+                 
Sbjct: 181  VGDPRGPEAGLLENHSMQHATKESDDLEPTDKELDLVQEQLSKSPAVRSRRQTERKAKRA 240

Query: 1448 XXXXXXXXXXXXXXXXXXXXXXXXXVHEIDYSDPLRYLRXXXXXXXXXXXXXXXXXSQGI 1269
                                     + +IDYSDPLRYLR                 S+GI
Sbjct: 241  KAAEKAAANVVSVKPGSTSRKKRVSLQDIDYSDPLRYLRATTSTSKLLTSTEELELSEGI 300

Query: 1268 QELIKLERLQEELTERNGSPSTFAQWATAAGVDSKTLRKKLNYGKHCKDKMIISNIRLVI 1089
            Q+L+KLE+L EEL ER GS   FAQWA AAGVD KTLRK+LNYG  CKDKMI SNIRLVI
Sbjct: 301  QDLLKLEKLHEELAERCGSQPAFAQWAAAAGVDQKTLRKRLNYGTLCKDKMIKSNIRLVI 360

Query: 1088 SIAKNFQGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLSDQSR 909
            SIAKN+QGAGMNL+DLVQEGCRGLV+GAEKFDASKGFKFSTYAHWWIKQAVR+SLSDQSR
Sbjct: 361  SIAKNYQGAGMNLEDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSR 420

Query: 908  TIRLPFHMVEATYRVREARKQLYSENGRYPENEEIAEAAGLTMKRFTAVMLTPKAPRSLD 729
            TIRLPFHMVEATYRV+EARKQLYSENGR P++ EIAEA GL+MKR TAV+LTPKAPRSL+
Sbjct: 421  TIRLPFHMVEATYRVKEARKQLYSENGRQPDDVEIAEATGLSMKRLTAVLLTPKAPRSLE 480

Query: 728  QKFGIDQSLKPSEVIADPEASTSEEILIKQIVKRDLHKVLDSLSAREKQVIKWRFGLGDG 549
            QK GI+Q+LKPSEVIADP+A T+EE+L+KQ +K+DL  VLDSL+ RE+QVI+WRFG+ DG
Sbjct: 481  QKIGINQNLKPSEVIADPDAETAEELLMKQFMKQDLENVLDSLNPRERQVIRWRFGMEDG 540

Query: 548  RMKTLQEIGLAMGVSRERIRQIESCAFXXXXXXXXXXXXRQHLIP 414
            RMKTLQEIG +MGVSRERIRQIESCAF            +Q+L+P
Sbjct: 541  RMKTLQEIGESMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLLP 585