BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00005804
         (830 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PPD88818.1| hypothetical protein GOBAR_DD14224 [Gossypium bar...   174   3e-46
gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposo...   168   5e-44
gb|PHT53674.1| hypothetical protein CQW23_08136 [Capsicum baccatum]   168   6e-44
gb|KYP46254.1| Retrovirus-related Pol polyprotein from transposo...   153   8e-39
gb|PKA49510.1| Retrovirus-related Pol polyprotein from transposo...   148   1e-38
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]        149   7e-37
emb|CAJ86151.1| H0413E07.4 [Oryza sativa]                             148   1e-36
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]     148   2e-36
gb|KYP46255.1| Retrovirus-related Pol polyprotein from transposo...   144   3e-36
gb|KYP36635.1| Retrovirus-related Pol polyprotein from transposo...   141   6e-36
gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium bar...   146   8e-36
gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium bar...   146   9e-36
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] >gi|133711...   145   1e-35
gb|KYP59893.1| Retrovirus-related Pol polyprotein from transposo...   143   2e-35
gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subc...   144   4e-35
gb|PON41343.1| Zinc finger, CCHC-type [Parasponia andersonii]         137   4e-35
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]     144   5e-35
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc...   144   5e-35
dbj|BAF27642.2| Os11g0157000 [Oryza sativa Japonica Group]            143   7e-35
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...   143   7e-35

>gb|PPD88818.1| hypothetical protein GOBAR_DD14224 [Gossypium barbadense]
          Length = 718

 Score =  174 bits (442), Expect = 3e-46
 Identities = 98/275 (35%), Positives = 156/275 (56%), Gaps = 1/275 (0%)
 Frame = -1

Query: 830  EFTSIINELDKIEVKIEDEDQALLLLCSLPSTYKSFRDAIIYGGKESLKINEVREHLLNK 651
            +F +++N+L  +EV I+DEDQA+LLLCSLPS+YKSF++ +IYG K+ L   +V+ HLL++
Sbjct: 391  QFITLLNDLKNVEVHIDDEDQAMLLLCSLPSSYKSFKETLIYG-KDKLSFEDVKGHLLSR 449

Query: 650  DKIDKQLTGSPNGGDSSALYAKEKKGKQRSSTNSEVKSCSFCKRTGHVRXXXXXXXXXXX 471
            DK+D +   +      +++    KK ++R         C +CK+ GHV+           
Sbjct: 450  DKLDNEFDLNSKADRQASVLVASKKREKR---------CRYCKKLGHVKADYYKLRNKRA 500

Query: 470  XXXXXXXXXXXXXXXXXETHVADLVGDEEVVCSVTDSLVSNDDDWIVDSGCSKHISPKAE 291
                               ++ D  GD+ ++ S +D+     + WI+DSGCS H+ P  E
Sbjct: 501  AESNEEDVVG--------ANLVDEGGDDFLLVSTSDNSKLTSE-WILDSGCSFHMYPNRE 551

Query: 290  TFSTYTSVQGGAVFMGNSARCSVIGKGAVQLRSYDGSMTTLSDVCHVPESRYNIISLGAL 111
             FSTY+SV+GG V MGN +   +IG G V++R +DG++ TLSDV +VP+ R N+ISL  L
Sbjct: 552  WFSTYSSVEGGVVHMGNDSSSKIIGIGTVKIRIHDGTIKTLSDVRYVPDLRKNLISLSIL 611

Query: 110  HSAGFAYRSESDRLVITKDARISFVA-KKIGNIYR 9
               G     ES  + +++ A +     +K+G+  R
Sbjct: 612  DLKGCRINIESSNIKVSRGALVLLKGFEKLGHCIR 646


>gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 690

 Score =  168 bits (425), Expect = 5e-44
 Identities = 94/283 (33%), Positives = 152/283 (53%), Gaps = 7/283 (2%)
 Frame = -1

Query: 830 EFTSIINELDKIEVKIEDEDQALLLLCSLPSTYKSFRDAIIYGGKESLKINEVREHLLNK 651
           EF SII +L+ IE+KI+DED+A+LL+ SLPSTYK F++ ++Y   ++L   +V+ +LL+K
Sbjct: 125 EFNSIIMDLENIEIKIDDEDKAVLLIVSLPSTYKHFKEIMLYSNNDTLSFEDVKSNLLSK 184

Query: 650 DKIDKQLTGSPNGGDSSALYAKEKKG-------KQRSSTNSEVKSCSFCKRTGHVRXXXX 492
           +K D  +     G   S     ++KG       + +S      K+C +CK+ GH      
Sbjct: 185 EKFDLDIHSEDKGEGLSVRGRTQEKGSTSNKKSRSKSRGRKSNKTCRYCKKFGH------ 238

Query: 491 XXXXXXXXXXXXXXXXXXXXXXXXETHVADLVGDEEVVCSVTDSLVSNDDDWIVDSGCSK 312
                                   E    +   D +V+ SV+    S  + WI+DSGC+ 
Sbjct: 239 --DISDCFILKKKQERQEKGKNPAEAANVETDSDGDVMISVSSDKRSKTE-WILDSGCTF 295

Query: 311 HISPKAETFSTYTSVQGGAVFMGNSARCSVIGKGAVQLRSYDGSMTTLSDVCHVPESRYN 132
           H+ P  + F+T   V  G V MGN  +C + G G +Q++++DG++ TLS+V  +P+ + N
Sbjct: 296 HMCPYKDLFTTLEPVDSGVVLMGNDTQCKIAGIGTIQIKTHDGTIKTLSNVRFIPDLKRN 355

Query: 131 IISLGALHSAGFAYRSESDRLVITKDARISFVAKKIGNIYRLE 3
           +ISLG L S G  Y +E   L ++K A +   A +IG++Y L+
Sbjct: 356 LISLGTLESLGCKYSAEGGVLKVSKGAIVLLKANRIGSLYILQ 398


>gb|PHT53674.1| hypothetical protein CQW23_08136 [Capsicum baccatum]
          Length = 707

 Score =  168 bits (425), Expect = 6e-44
 Identities = 94/282 (33%), Positives = 154/282 (54%), Gaps = 6/282 (2%)
 Frame = -1

Query: 830 EFTSIINELDKIEVKIEDEDQALLLLCSLPSTYKSFRDAIIYGGKESLKINEVREHLLNK 651
           EF SII +L+ ++V+I+DED+A+LL+ SLP +Y+ F++ ++YG   +L  ++V+ +LL+K
Sbjct: 123 EFNSIIIDLENLDVEIDDEDKAVLLIVSLPPSYRHFKEIMLYGNNVTLSFDDVKSNLLSK 182

Query: 650 DKIDKQLTGSPNG------GDSSALYAKEKKGKQRSSTNSEVKSCSFCKRTGHVRXXXXX 489
           +K D Q+    +G      G +  + A  K   +    NS  K C +CK+  H       
Sbjct: 183 EKFDTQIHSESSGEGLVVRGRNHEVGASGKNQSKSKGKNS--KYCRYCKKRNH----EIS 236

Query: 488 XXXXXXXXXXXXXXXXXXXXXXXETHVADLVGDEEVVCSVTDSLVSNDDDWIVDSGCSKH 309
                                   + V      E  + S T+    N+  W++DSGC+ H
Sbjct: 237 ECYKLKNKQNREDKGKQPEKSAEASFVETESDGECFIASGTEQRSKNE--WVLDSGCTFH 294

Query: 308 ISPKAETFSTYTSVQGGAVFMGNSARCSVIGKGAVQLRSYDGSMTTLSDVCHVPESRYNI 129
           +SP  + F+TY S  GG V MGN A+C V+GKG ++++++DG + TL+ V HVP+ + N+
Sbjct: 295 MSPNRDWFTTYESFNGGLVLMGNDAQCKVVGKGTIKIKTHDGVVRTLTSVRHVPDLKRNL 354

Query: 128 ISLGALHSAGFAYRSESDRLVITKDARISFVAKKIGNIYRLE 3
           ISLG L S G  Y +E   L ++K A +   A + G++Y L+
Sbjct: 355 ISLGTLESQGCRYSAEGGVLKVSKGALVLLKAIRSGSLYLLQ 396


>gb|KYP46254.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 609

 Score =  153 bits (386), Expect = 8e-39
 Identities = 94/285 (32%), Positives = 147/285 (51%), Gaps = 9/285 (3%)
 Frame = -1

Query: 830 EFTSIINELDKIEVKIEDEDQALLLLCSLPSTYKSFRDAIIYGGKESLKINEVREHLLNK 651
           E  SI+ EL  I+VKIEDED A++LL SLP +Y+SF +++  G KE + + EV+  L ++
Sbjct: 59  ELNSILMELRYIDVKIEDEDAAMILLASLPPSYESFVNSLTVG-KECITMEEVKSSLHSR 117

Query: 650 DKIDKQLTGSPNGGDSSALYA---------KEKKGKQRSSTNSEVKSCSFCKRTGHVRXX 498
           +   K    S  G + + L A         K+++GK+++  N     C++CK  GH +  
Sbjct: 118 ELWFKASANS-EGVNGAGLLAFNSTKNGKKKKEQGKKKTKVNPR-DICNYCKEPGHWKKD 175

Query: 497 XXXXXXXXXXXXXXXXXXXXXXXXXXETHVADLVGDEEVVCSVTDSLVSNDDDWIVDSGC 318
                                          D   + E+V S+ D+   + + W++DSGC
Sbjct: 176 CPKKRNQKSVAVAAQE---------------DSSFENELVLSIVDNHQHSAEQWVLDSGC 220

Query: 317 SKHISPKAETFSTYTSVQGGAVFMGNSARCSVIGKGAVQLRSYDGSMTTLSDVCHVPESR 138
           S H+ P    F TY    GG VFMGN   C  IG G +Q++ +DG + TL++V HVP+ +
Sbjct: 221 SYHMCPNRSWFLTYEKKSGGDVFMGNDMACKTIGIGTIQIKMHDGVIRTLTEVRHVPDLK 280

Query: 137 YNIISLGALHSAGFAYRSESDRLVITKDARISFVAKKIGNIYRLE 3
            N+IS+G LH+ GF    E   + I+K + +     K GN+Y L+
Sbjct: 281 KNLISVGVLHTKGFKCNVEGGVMEISKGSTVVIRGIKKGNLYMLQ 325


>gb|PKA49510.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Apostasia shenzhenica]
          Length = 365

 Score =  148 bits (374), Expect = 1e-38
 Identities = 93/279 (33%), Positives = 145/279 (51%), Gaps = 5/279 (1%)
 Frame = -1

Query: 827 FTSIINELDKIEVKIEDEDQALLLLCSLPSTYKSFRDAIIYGGKESLKINEVREHLLNKD 648
           F+ +I++L  I VK+E+E++ALLLL SLP +Y      I+YG K++LK+ EV   LL+ +
Sbjct: 14  FSKMISQLRSINVKLEEENEALLLLSSLPKSYDHLVTTILYG-KDTLKVEEVNATLLSNE 72

Query: 647 KIDKQLTGSPNGGDSSALY--AKEKKGKQ---RSSTNSEVKSCSFCKRTGHVRXXXXXXX 483
             +KQ TG      +S     +K K G Q   RS +      C +CK+ GH +       
Sbjct: 73  VRNKQSTGESLTVKTSQDRGRSKNKFGNQYRYRSISKENDNRCYYCKKEGHWKRDCPKKS 132

Query: 482 XXXXXXXXXXXXXXXXXXXXXETHVADLVGDEEVVCSVTDSLVSNDDDWIVDSGCSKHIS 303
                                    + L  D E +C  T S + + D WI+DS CS H+ 
Sbjct: 133 KQQQQKKSGEEASV----------ASRLEKDSETLC--TFSCMDSSDSWILDSDCSYHMC 180

Query: 302 PKAETFSTYTSVQGGAVFMGNSARCSVIGKGAVQLRSYDGSMTTLSDVCHVPESRYNIIS 123
           P  + FSTY+   GG V MGN++ C  +G G ++++ +DG + TL++V HVP+ R  +IS
Sbjct: 181 PFRDWFSTYSIHDGGRVIMGNNSECKSVGIGTIKIKMFDGVIRTLTEVRHVPDLRKGLIS 240

Query: 122 LGALHSAGFAYRSESDRLVITKDARISFVAKKIGNIYRL 6
           LG L ++G  +      + + K A +    +KI ++YRL
Sbjct: 241 LGTLDASGCTFIGSDGIIKVKKGAPVVMKGEKIESLYRL 279


>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
          Length = 1181

 Score =  149 bits (376), Expect = 7e-37
 Identities = 90/292 (30%), Positives = 141/292 (48%), Gaps = 17/292 (5%)
 Frame = -1

Query: 827 FTSIINELDKIEVKIEDEDQALLLLCSLPSTYKSFRDAIIYGGKESLKINEVREHLLNKD 648
           F  I+ +L+ +EVK +++D AL+LLCSLPS+Y +FRD I+Y  +++L + EV + L  K+
Sbjct: 124 FKEIVADLESMEVKYDEKDLALILLCSLPSSYANFRDTILYS-RDTLTLKEVYDALHAKE 182

Query: 647 KIDKQLTGSPNGGDSSALYAKEKKGKQ----------------RSSTNSEVKSCSFCKRT 516
           K+ K +    +   +  L  +  + ++                RS +    KSC +CKR 
Sbjct: 183 KMKKMVPSEGSNSQAEGLVVRGSQQEKNTNNKSRDKSSSSYRGRSKSRGRYKSCKYCKRD 242

Query: 515 GHVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXETHVADLVGDEEVVCSVTDSLVSNDDDW 336
           GH                                 V D   D E++ +         D W
Sbjct: 243 GH-DISKCWKLQDKDKRTGKYIPKGKKEEEGKAAVVTDEKSDAELLVAYA-GCAQTSDQW 300

Query: 335 IVDSGCSKHISPKAETFSTYTSVQGGAVFMGNSARCSVIGKGAVQLRSYDGSMTTLSDVC 156
           I+D+ C+ H+ P  + F+TY  VQGG V MG+   C V G G VQ++ +DG + TLSDV 
Sbjct: 301 ILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVR 360

Query: 155 HVPESRYNIISLGALHSAGFAYRSESDRLVITKDARISFVAK-KIGNIYRLE 3
           H+P  + ++ISL  L   G+ Y      L +TK + +   A  K  N+Y L+
Sbjct: 361 HIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKASIKSANLYHLQ 412


>emb|CAJ86151.1| H0413E07.4 [Oryza sativa]
          Length = 1205

 Score =  148 bits (374), Expect = 1e-36
 Identities = 90/292 (30%), Positives = 140/292 (47%), Gaps = 17/292 (5%)
 Frame = -1

Query: 827 FTSIINELDKIEVKIEDEDQALLLLCSLPSTYKSFRDAIIYGGKESLKINEVREHLLNKD 648
           F  I+ +L+ +EVK ++ED  L+LLCSLPS+Y +FRD I+Y  +++L + EV + L  K+
Sbjct: 109 FKEIVADLESMEVKYDEEDLGLILLCSLPSSYANFRDTILYS-RDTLTLKEVYDALHAKE 167

Query: 647 KIDKQLTGSPNGGDSSALYAKEKKGKQ----------------RSSTNSEVKSCSFCKRT 516
           K+ K +    +   +  L  +  + ++                RS +    KSC +CKR 
Sbjct: 168 KMKKMVPSEGSNSQAEGLVVQGSQQEKNTNNKSRDKSSSSYRGRSKSRGRYKSCKYCKRD 227

Query: 515 GHVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXETHVADLVGDEEVVCSVTDSLVSNDDDW 336
           GH                                 V D   D E++ +         D W
Sbjct: 228 GH-DISKCWKLQDKDKRTGKYIPKGKKEDEGKAAVVTDEKSDAELLVAYA-GCAQTSDQW 285

Query: 335 IVDSGCSKHISPKAETFSTYTSVQGGAVFMGNSARCSVIGKGAVQLRSYDGSMTTLSDVC 156
           I+D+ C+ H+ P  + F+TY  VQGG V MG+   C V G G VQ++ +DG + TLSDV 
Sbjct: 286 ILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVR 345

Query: 155 HVPESRYNIISLGALHSAGFAYRSESDRLVITKDARISFVAK-KIGNIYRLE 3
           H+P  + ++ISL  L   G+ Y      L +TK + +   A  K  N+Y L+
Sbjct: 346 HIPNLKRSLISLCTLDCKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLQ 397


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score =  148 bits (373), Expect = 2e-36
 Identities = 89/291 (30%), Positives = 140/291 (48%), Gaps = 17/291 (5%)
 Frame = -1

Query: 827 FTSIINELDKIEVKIEDEDQALLLLCSLPSTYKSFRDAIIYGGKESLKINEVREHLLNKD 648
           F  I+ +L+ +EVK ++ED  L+LLCSLPS+Y +FRD I+Y  +++L + EV + L  K+
Sbjct: 33  FKEIVADLESMEVKYDEEDLGLILLCSLPSSYANFRDTILYS-RDTLTLKEVYDALHAKE 91

Query: 647 KIDKQLTGSPNGGDSSALYAKEKKGKQ----------------RSSTNSEVKSCSFCKRT 516
           K+ K +    +   +  L  + ++ ++                RS +    KSC +CKR 
Sbjct: 92  KMKKMVPSEGSNSQAEGLVVRGRQQEKNTNNKSRDKSSSIYRGRSKSRGRYKSCKYCKRD 151

Query: 515 GHVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXETHVADLVGDEEVVCSVTDSLVSNDDDW 336
           GH                                 V D   D E++ +         D W
Sbjct: 152 GH-DISECWKLQDKDKRTRKYIPKGKKEEEGKAAVVTDEKSDAELLVAYA-GCAQTSDQW 209

Query: 335 IVDSGCSKHISPKAETFSTYTSVQGGAVFMGNSARCSVIGKGAVQLRSYDGSMTTLSDVC 156
           I+D+ C+ H+ P  + F+TY +VQGG V MG+   C V G G VQ++ +DG + TL DV 
Sbjct: 210 ILDTACTYHMCPNRDWFATYEAVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLLDVR 269

Query: 155 HVPESRYNIISLGALHSAGFAYRSESDRLVITKDARISFVAK-KIGNIYRL 6
           H+P  + ++ISL  L   G+ Y      L +TK + +   A  K  N+Y L
Sbjct: 270 HIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKYANLYHL 320


>gb|KYP46255.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 507

 Score =  144 bits (364), Expect = 3e-36
 Identities = 93/279 (33%), Positives = 141/279 (50%), Gaps = 15/279 (5%)
 Frame = -1

Query: 830 EFTSIINELDKIEVKIEDEDQALLLLCSLPSTYKSFRDAIIYGGKESLKINEVREHLLNK 651
           E  SI+ EL  I+VKIEDED A++LL SLP +Y+SF +++  G KE + + EV+  L ++
Sbjct: 32  ELNSILMELRYIDVKIEDEDAAMILLASLPPSYESFVNSLTVG-KECITMEEVKSSLHSR 90

Query: 650 DKIDKQLTGSPNGGDSSALYA---------KEKKGKQRSSTNSEVKSCSFCKRTGHVRXX 498
           +   K    S  G + + L A         K+++GK+++  N     C++CK  GH +  
Sbjct: 91  ELWFKASANS-EGVNGAGLLAFNSTKNGKKKKEQGKKKTKVNPR-DICNYCKEPGHWKKD 148

Query: 497 XXXXXXXXXXXXXXXXXXXXXXXXXXETHVADLVGDEEVVCSVTDSLVSNDDDWIVDSGC 318
                                          D   + E+V S+ D+   + + W++DSGC
Sbjct: 149 CPKKRNQKSVAVAAQE---------------DSSFENELVLSIVDNHQHSAEQWVLDSGC 193

Query: 317 SKHISPKAETFSTYTSVQGGAVFMGNSARCSVIGKGAVQLRSYDGSMTTLSDVCHVPESR 138
           S H+ P    F TY    GG VFMGN   C  IG G +Q++ +DG + TL++V HVP+ +
Sbjct: 194 SYHMCPNRSWFLTYEKKSGGDVFMGNDMACKTIGIGTIQIKMHDGVIRTLTEVRHVPDLK 253

Query: 137 YNIISLGALHSAGFAYRSESDRL------VITKDARISF 39
            N+IS+G LH+ GF    E   L      V+ K  RI F
Sbjct: 254 KNLISVGVLHTKGFKCNVEVKELKFCEHCVVGKHHRIKF 292


>gb|KYP36635.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 364

 Score =  141 bits (355), Expect = 6e-36
 Identities = 86/245 (35%), Positives = 124/245 (50%), Gaps = 7/245 (2%)
 Frame = -1

Query: 830 EFTSIINELDKIEVKIEDEDQALLLLCSLPSTYKSFRDAIIYGGKESLKINEV------R 669
           E  S++ EL  I+VKIEDED A++LL SLP +Y+SF +++  G KE + + EV      R
Sbjct: 135 ELNSVLMELRDIDVKIEDEDAAMILLASLPPSYESFVNSLSVG-KECITMEEVKSSLHSR 193

Query: 668 EHLLNKDKIDKQLTGSPNGGDSSALYAKEKKGKQRSSTNSEVKS-CSFCKRTGHVRXXXX 492
           E  L      ++  GS     +S    K+KK K +  TN   K  C++CK  GH +    
Sbjct: 194 EFRLRASGNSEESNGSSLVVSNSGKNMKKKKDKSKRKTNVNPKDICNYCKEPGHWKKDCP 253

Query: 491 XXXXXXXXXXXXXXXXXXXXXXXXETHVADLVGDEEVVCSVTDSLVSNDDDWIVDSGCSK 312
                                        +   + E+V S+ D    ++D WI+DSGCS 
Sbjct: 254 KKKGKPSAAVAKE----------------ESTSENELVLSIADQPQHSEDQWILDSGCSF 297

Query: 311 HISPKAETFSTYTSVQGGAVFMGNSARCSVIGKGAVQLRSYDGSMTTLSDVCHVPESRYN 132
           H+ P    F TY    GG VFMGN A C  IG G ++++ +DG   TL++V HVPE + N
Sbjct: 298 HMCPNRTWFDTYEKKSGGNVFMGNDAPCKTIGIGTIKIKMHDGITRTLTEVRHVPELKKN 357

Query: 131 IISLG 117
           +IS+G
Sbjct: 358 LISVG 362


>gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium barbadense]
          Length = 1841

 Score =  146 bits (368), Expect = 8e-36
 Identities = 92/269 (34%), Positives = 144/269 (53%), Gaps = 9/269 (3%)
 Frame = -1

Query: 830  EFTSIINELDKIEVKIEDEDQALLLLCSLPSTYKSFRDAIIYGGKESLKINEVREHLLNK 651
            +F SII +L+ I+ KI+DEDQA+++LCSLP +Y++F D ++YG ++ L + EV+ + L+ 
Sbjct: 648  KFNSIIMDLNNIDNKIDDEDQAIIVLCSLPPSYENFVDTMMYG-RDDLTLEEVK-NALSS 705

Query: 650  DKIDKQLTGSP-NGGDSSALYAKEK-KGKQRSSTNSEVKS-------CSFCKRTGHVRXX 498
             ++ K++TG      +   L A+ + K K  SS+ S  +S       C +CK+ GH++  
Sbjct: 706  SELRKKITGKVVENNEGEGLVARGRSKAKGGSSSKSHPRSQSKKRIQCYYCKKYGHMKVD 765

Query: 497  XXXXXXXXXXXXXXXXXXXXXXXXXXETHVADLVGDEEVVCSVTDSLVSNDDDWIVDSGC 318
                                          AD   D E+V +V+DS       WI+D+G 
Sbjct: 766  CPKRKEKSESQEQQNDRANVAD--------ADSSSDAEIVLAVSDSYAGGR--WILDTGA 815

Query: 317  SKHISPKAETFSTYTSVQGGAVFMGNSARCSVIGKGAVQLRSYDGSMTTLSDVCHVPESR 138
            + HIS   + FSTY     G+V MGN   C V+G G V+++ +DG + TL+DV H+PE +
Sbjct: 816  TFHISTSKDAFSTYEK-HSGSVLMGNDHACQVMGIGTVRIKMFDGIVRTLTDVRHIPEMK 874

Query: 137  YNIISLGALHSAGFAYRSESDRLVITKDA 51
             N+ISL  L   GF Y +E   L +   A
Sbjct: 875  KNLISLSTLDKKGFRYSAEGGVLKVFSGA 903


>gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium barbadense]
          Length = 2351

 Score =  146 bits (368), Expect = 9e-36
 Identities = 92/269 (34%), Positives = 144/269 (53%), Gaps = 9/269 (3%)
 Frame = -1

Query: 830  EFTSIINELDKIEVKIEDEDQALLLLCSLPSTYKSFRDAIIYGGKESLKINEVREHLLNK 651
            +F SII +L+ I+ KI+DEDQA+++LCSLP +Y++F D ++YG ++ L + EV+ + L+ 
Sbjct: 627  KFNSIIMDLNNIDNKIDDEDQAIIVLCSLPPSYENFVDTMMYG-RDDLTLEEVK-NALSS 684

Query: 650  DKIDKQLTGSP-NGGDSSALYAKEK-KGKQRSSTNSEVKS-------CSFCKRTGHVRXX 498
             ++ K++TG      +   L A+ + K K  SS+ S  +S       C +CK+ GH++  
Sbjct: 685  SELRKKITGKVVENNEGEGLVARGRSKAKGGSSSKSHPRSQSKKRIQCYYCKKYGHMKVD 744

Query: 497  XXXXXXXXXXXXXXXXXXXXXXXXXXETHVADLVGDEEVVCSVTDSLVSNDDDWIVDSGC 318
                                          AD   D E+V +V+DS       WI+D+G 
Sbjct: 745  CPKRKEKSESQEQQNDRANVAD--------ADSSSDAEIVLAVSDSYAGGR--WILDTGA 794

Query: 317  SKHISPKAETFSTYTSVQGGAVFMGNSARCSVIGKGAVQLRSYDGSMTTLSDVCHVPESR 138
            + HIS   + FSTY     G+V MGN   C V+G G V+++ +DG + TL+DV H+PE +
Sbjct: 795  TFHISTSKDAFSTYEK-HSGSVLMGNDHACQVMGIGTVRIKMFDGIVRTLTDVRHIPEMK 853

Query: 137  YNIISLGALHSAGFAYRSESDRLVITKDA 51
             N+ISL  L   GF Y +E   L +   A
Sbjct: 854  KNLISLSTLDKKGFRYSAEGGVLKVFSGA 882


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum]
 gb|ABO36636.1| copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  145 bits (366), Expect = 1e-35
 Identities = 86/284 (30%), Positives = 144/284 (50%), Gaps = 8/284 (2%)
 Frame = -1

Query: 830 EFTSIINELDKIEVKIEDEDQALLLLCSLPSTYKSFRDAIIYGGKESLKINEVREHLLNK 651
           +  +++ EL  I+VKIEDED AL+LL SLP ++++F  + I G K+++ + EVR  L ++
Sbjct: 121 QLNTLLLELRNIDVKIEDEDAALILLVSLPMSFENFVQSFIVG-KDTVSLEEVRSALHSR 179

Query: 650 DKIDKQLTGSPNGGDSSALYAKEKKGKQRSSTNSEVKS--------CSFCKRTGHVRXXX 495
           + +  +  G+      S L+   +KG++     ++  S        C++CK  GH +   
Sbjct: 180 E-LRHKANGTSTDIQPSGLFTSSRKGRKNGGKKNKPMSKGAKPDDVCNYCKEKGHWKFDC 238

Query: 494 XXXXXXXXXXXXXXXXXXXXXXXXXETHVADLVGDEEVVCSVTDSLVSNDDDWIVDSGCS 315
                                         +    EE +  V D    + D W++DSG S
Sbjct: 239 PKKKKQSEKQSVSAAV------------AEEDTNSEEDIALVADEHTHHSDVWVLDSGAS 286

Query: 314 KHISPKAETFSTYTSVQGGAVFMGNSARCSVIGKGAVQLRSYDGSMTTLSDVCHVPESRY 135
            HI P+ E F+TY  V GG++ M NS+ C V+G G++++R++DGS  TL++V HVP    
Sbjct: 287 YHICPRREWFTTYEQVDGGSISMANSSVCKVVGTGSIKIRTHDGSFCTLNEVRHVPLMTK 346

Query: 134 NIISLGALHSAGFAYRSESDRLVITKDARISFVAKKIGNIYRLE 3
           N+ISL  L S GF++  +   L + K + +       G +Y L+
Sbjct: 347 NLISLSLLDSKGFSWSGKDGVLRVWKGSNLILKGVMRGTLYFLQ 390


>gb|KYP59893.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 593

 Score =  143 bits (361), Expect = 2e-35
 Identities = 93/285 (32%), Positives = 142/285 (49%), Gaps = 9/285 (3%)
 Frame = -1

Query: 830 EFTSIINELDKIEVKIEDEDQALLLLCSLPSTYKSFRDAIIYGGKESLKINEVREHLLNK 651
           E  SI+ EL  I VKIEDED A++LL SLP +Y+SF +++  G KE + + EV+  L ++
Sbjct: 111 ELNSILMELRDINVKIEDEDAAMILLASLPPSYESFVNSLSVG-KECITMEEVKSSLHSR 169

Query: 650 DKIDKQLTGSPNGGDSSALYA---------KEKKGKQRSSTNSEVKSCSFCKRTGHVRXX 498
           +   K    S  G + + L A         K+++GK+++  N     C++CK  GH +  
Sbjct: 170 ELRFKASANS-EGVNGAGLLAFNSTTNGKKKKEQGKKKTKVNPR-DICNYCKEPGHWKKD 227

Query: 497 XXXXXXXXXXXXXXXXXXXXXXXXXXETHVADLVGDEEVVCSVTDSLVSNDDDWIVDSGC 318
                                          D   + E+V S+ D+     + W++DSGC
Sbjct: 228 CPKKRNQKSVVVAAQE---------------DSSFENELVLSIVDNHQHFVEQWVLDSGC 272

Query: 317 SKHISPKAETFSTYTSVQGGAVFMGNSARCSVIGKGAVQLRSYDGSMTTLSDVCHVPESR 138
           S H+ P    F TY    GG VFMGN   C  I  G +Q++ +DG + TL++V HVP+ +
Sbjct: 273 SYHMCPNRSWFLTYEKKFGGDVFMGNDMACKTISIGTIQIKMHDGVIRTLTEVRHVPDLK 332

Query: 137 YNIISLGALHSAGFAYRSESDRLVITKDARISFVAKKIGNIYRLE 3
            N+IS+G L + GF    E   + I K + I     K GN+Y L+
Sbjct: 333 KNLISVGVLDTKGFKCNVEGGVMEINKGSTIVIRGIKKGNLYMLQ 377


>gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1138

 Score =  144 bits (363), Expect = 4e-35
 Identities = 87/286 (30%), Positives = 138/286 (48%), Gaps = 16/286 (5%)
 Frame = -1

Query: 827 FTSIINELDKIEVKIEDEDQALLLLCSLPSTYKSFRDAIIYGGKESLKINEVREHLLNKD 648
           F  I+ +L+ +EVK ++ED  L+LLCSLPS+Y +FRD I+Y  +++L + EV + L  K+
Sbjct: 66  FKEIVADLESMEVKYDEEDLGLILLCSLPSSYANFRDTILYS-RDTLTLKEVYDALHTKE 124

Query: 647 KIDKQLTGSPNGGDSSALYAKEKKGKQ----------------RSSTNSEVKSCSFCKRT 516
           K+ K +    +   +  L  + ++ K+                RS +    KSC +CKR 
Sbjct: 125 KMKKMVPSEGSNSQAEGLVVRGRQQKKNTKNQSRDKSSSSYRGRSKSRGRYKSCKYCKRD 184

Query: 515 GHVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXETHVADLVGDEEVVCSVTDSLVSNDDDW 336
           GH                                 V D   D E++ +         D W
Sbjct: 185 GH-DISECWKLQDKDKRTRKYIPKGKKEEEGKAAIVTDEKSDAELLVAYA-GCAQTSDQW 242

Query: 335 IVDSGCSKHISPKAETFSTYTSVQGGAVFMGNSARCSVIGKGAVQLRSYDGSMTTLSDVC 156
           I+D+ C+ H+ P  + F+TY +VQGG V MG+   C V G G VQ++ +DG + TLSDV 
Sbjct: 243 ILDTACTYHMCPNRDWFATYEAVQGGTVLMGDDTPCEVAGIGIVQIKMFDGCIRTLSDVR 302

Query: 155 HVPESRYNIISLGALHSAGFAYRSESDRLVITKDARISFVAKKIGN 18
           H P  + ++ISL  L   G+ Y S  D ++      ++ V+  + N
Sbjct: 303 HFPNLKRSLISLRTLDRKGYKY-SGGDGILKLILGNVAVVSDSLSN 347


>gb|PON41343.1| Zinc finger, CCHC-type [Parasponia andersonii]
          Length = 297

 Score =  137 bits (345), Expect = 4e-35
 Identities = 83/269 (30%), Positives = 136/269 (50%), Gaps = 7/269 (2%)
 Frame = -1

Query: 830 EFTSIINELDKIEVKIEDEDQALLLLCSLPSTYKSFRDAIIYGGKESLKINEVREHLLNK 651
           +F  II++L+ IE+K+EDED+AL+LL +LP  Y+ F+DA++YG ++++ ++EV+  +  K
Sbjct: 32  KFNKIIDDLENIEIKLEDEDKALILLNALPKAYEHFKDAMLYGREQTITLDEVQSAVKAK 91

Query: 650 DKIDKQLTGSPNGGDSSALYAKEKK-------GKQRSSTNSEVKSCSFCKRTGHVRXXXX 492
           +   K+     N G+      + +K        + RS +   +K C  C + GH +    
Sbjct: 92  ELPRKKEGKEENTGEGLMARGRSEKCDNKAPRNESRSKSKGRLK-CFHCHKEGHFKRDCP 150

Query: 491 XXXXXXXXXXXXXXXXXXXXXXXXETHVADLVGDEEVVCSVTDSLVSNDDDWIVDSGCSK 312
                                      VA    D   V  VTD    +  +WI+DSGCS 
Sbjct: 151 DRKKKVHEKPKDPGE----------ASVASDGYDSAEVLVVTDE--DSSKEWIMDSGCSF 198

Query: 311 HISPKAETFSTYTSVQGGAVFMGNSARCSVIGKGAVQLRSYDGSMTTLSDVCHVPESRYN 132
           H+ P    F       GG+V +GN+  C V G G+V++R +DG    L  V +VPE + N
Sbjct: 199 HMCPTKSWFENLEKTDGGSVLLGNNKPCKVAGIGSVRIRMFDGMERILQQVRYVPELKRN 258

Query: 131 IISLGALHSAGFAYRSESDRLVITKDARI 45
           +ISLG L   G+++++E   L ++K + I
Sbjct: 259 LISLGMLDMNGYSFKAEHGSLKVSKGSLI 287


>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1280

 Score =  144 bits (362), Expect = 5e-35
 Identities = 92/291 (31%), Positives = 138/291 (47%), Gaps = 17/291 (5%)
 Frame = -1

Query: 827  FTSIINELDKIEVKIEDEDQALLLLCSLPSTYKSFRDAIIYGGKESLKINEVREHLLNKD 648
            F  I+ +L+ IEVK ++ED  L+LLCSLPS+Y +FRD I+Y   ++L + EV + L  K+
Sbjct: 159  FKEIVADLESIEVKYDEEDLGLILLCSLPSSYANFRDTILYS-HDTLILKEVYDALHAKE 217

Query: 647  KIDKQLTGSPNGGDSSALYAK----EKKGKQ------------RSSTNSEVKSCSFCKRT 516
            K+ K +    +   +  L  +    EK  K             RS +    KSC +CKR 
Sbjct: 218  KMKKMVPSEGSNSQAEGLVVRGRQQEKNTKNQSRDKSSSSYRGRSKSRGRYKSCKYCKRD 277

Query: 515  GHVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXETHVADLVGDEEVVCSVTDSLVSNDDDW 336
            GH                                 V D   D E++ +         D W
Sbjct: 278  GH-DISECWKLQDKDKRTGKYIPKGKKEEEGKAAVVTDEKSDTELLVAYA-GCAQTSDQW 335

Query: 335  IVDSGCSKHISPKAETFSTYTSVQGGAVFMGNSARCSVIGKGAVQLRSYDGSMTTLSDVC 156
            I+D+  + H+ P  + F+TY ++QGG V MG+   C V G G VQ++ +DG + TLSDV 
Sbjct: 336  ILDTAWTYHMCPNRDWFATYEALQGGTVLMGDDTPCEVAGIGTVQIKMFDGYIRTLSDVR 395

Query: 155  HVPESRYNIISLGALHSAGFAYRSESDRLVITKDARISFVAK-KIGNIYRL 6
            H+P  + ++ISL  L   G+ Y      L +TK + +   A  K  N+Y L
Sbjct: 396  HIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHL 446


>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1312

 Score =  144 bits (362), Expect = 5e-35
 Identities = 92/291 (31%), Positives = 138/291 (47%), Gaps = 17/291 (5%)
 Frame = -1

Query: 827  FTSIINELDKIEVKIEDEDQALLLLCSLPSTYKSFRDAIIYGGKESLKINEVREHLLNKD 648
            F  I+ +L+ IEVK ++ED  L+LLCSLPS+Y +FRD I+Y   ++L + EV + L  K+
Sbjct: 159  FKEIVADLESIEVKYDEEDLGLILLCSLPSSYANFRDTILYS-HDTLILKEVYDALHAKE 217

Query: 647  KIDKQLTGSPNGGDSSALYAK----EKKGKQ------------RSSTNSEVKSCSFCKRT 516
            K+ K +    +   +  L  +    EK  K             RS +    KSC +CKR 
Sbjct: 218  KMKKMVPSEGSNSQAEGLVVRGRQQEKNTKNQSRDKSSSSYRGRSKSRGRYKSCKYCKRD 277

Query: 515  GHVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXETHVADLVGDEEVVCSVTDSLVSNDDDW 336
            GH                                 V D   D E++ +         D W
Sbjct: 278  GH-DISECWKLQDKDKRTGKYIPKGKKEEEGKAAVVTDEKSDTELLVAYA-GCAQTSDQW 335

Query: 335  IVDSGCSKHISPKAETFSTYTSVQGGAVFMGNSARCSVIGKGAVQLRSYDGSMTTLSDVC 156
            I+D+  + H+ P  + F+TY ++QGG V MG+   C V G G VQ++ +DG + TLSDV 
Sbjct: 336  ILDTAWTYHMCPNRDWFATYEALQGGTVLMGDDTPCEVAGIGTVQIKMFDGYIRTLSDVR 395

Query: 155  HVPESRYNIISLGALHSAGFAYRSESDRLVITKDARISFVAK-KIGNIYRL 6
            H+P  + ++ISL  L   G+ Y      L +TK + +   A  K  N+Y L
Sbjct: 396  HIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHL 446


>dbj|BAF27642.2| Os11g0157000 [Oryza sativa Japonica Group]
          Length = 1601

 Score =  143 bits (361), Expect = 7e-35
 Identities = 92/291 (31%), Positives = 138/291 (47%), Gaps = 17/291 (5%)
 Frame = -1

Query: 827 FTSIINELDKIEVKIEDEDQALLLLCSLPSTYKSFRDAIIYGGKESLKINEVREHLLNKD 648
           F  II +L+ +EVK ++ED  L+LLCSLPS+Y +FRD I+Y  +++L + EV + L  K+
Sbjct: 124 FKEIIADLESMEVKYDEEDLGLILLCSLPSSYANFRDTILYS-RDTLTLKEVYDALHVKE 182

Query: 647 KIDKQLTGSPNGGDSSALYA----KEKKGKQ------------RSSTNSEVKSCSFCKRT 516
           K+ K +    +   +  L      +EK  K             RS +    KSC +CKR 
Sbjct: 183 KMKKMVPSEGSNSQAEGLIVWGRQQEKNTKNQSRDKSSSSYRGRSKSRGRYKSCKYCKRD 242

Query: 515 GHVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXETHVADLVGDEEVVCSVTDSLVSNDDDW 336
           GH                                 V D   D E++ +         D W
Sbjct: 243 GH-DIFECWKLHDKDKRTGKYVPKGKKEEEGKAAVVTDEKSDAELLVAYA-GCAQTSDQW 300

Query: 335 IVDSGCSKHISPKAETFSTYTSVQGGAVFMGNSARCSVIGKGAVQLRSYDGSMTTLSDVC 156
           I+++ C  H+ P  + F+TY +VQ G V MG+   C V G G VQ++ +DG + TLSDV 
Sbjct: 301 ILNTACIYHMCPNRDWFATYEAVQVGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVR 360

Query: 155 HVPESRYNIISLGALHSAGFAYRSESDRLVITKDARISFVAK-KIGNIYRL 6
           H+P  + ++ISL  L   G+ Y      L +TK + +   A  K  N+Y L
Sbjct: 361 HIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHL 411


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
 gb|ABA91548.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 2340

 Score =  143 bits (361), Expect = 7e-35
 Identities = 92/291 (31%), Positives = 138/291 (47%), Gaps = 17/291 (5%)
 Frame = -1

Query: 827  FTSIINELDKIEVKIEDEDQALLLLCSLPSTYKSFRDAIIYGGKESLKINEVREHLLNKD 648
            F  II +L+ +EVK ++ED  L+LLCSLPS+Y +FRD I+Y  +++L + EV + L  K+
Sbjct: 331  FKEIIADLESMEVKYDEEDLGLILLCSLPSSYANFRDTILYS-RDTLTLKEVYDALHVKE 389

Query: 647  KIDKQLTGSPNGGDSSALYA----KEKKGKQ------------RSSTNSEVKSCSFCKRT 516
            K+ K +    +   +  L      +EK  K             RS +    KSC +CKR 
Sbjct: 390  KMKKMVPSEGSNSQAEGLIVWGRQQEKNTKNQSRDKSSSSYRGRSKSRGRYKSCKYCKRD 449

Query: 515  GHVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXETHVADLVGDEEVVCSVTDSLVSNDDDW 336
            GH                                 V D   D E++ +         D W
Sbjct: 450  GH-DIFECWKLHDKDKRTGKYVPKGKKEEEGKAAVVTDEKSDAELLVAYA-GCAQTSDQW 507

Query: 335  IVDSGCSKHISPKAETFSTYTSVQGGAVFMGNSARCSVIGKGAVQLRSYDGSMTTLSDVC 156
            I+++ C  H+ P  + F+TY +VQ G V MG+   C V G G VQ++ +DG + TLSDV 
Sbjct: 508  ILNTACIYHMCPNRDWFATYEAVQVGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVR 567

Query: 155  HVPESRYNIISLGALHSAGFAYRSESDRLVITKDARISFVAK-KIGNIYRL 6
            H+P  + ++ISL  L   G+ Y      L +TK + +   A  K  N+Y L
Sbjct: 568  HIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHL 618