BLASTX nr result
ID: Ophiopogon25_contig00005533
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon25_contig00005533
(3920 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020266835.1| probable RNA-dependent RNA polymerase SHL2 [... 1726 0.0
ref|XP_010921974.1| PREDICTED: probable RNA-dependent RNA polyme... 1573 0.0
ref|XP_008778879.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA... 1572 0.0
ref|XP_020098906.1| probable RNA-dependent RNA polymerase SHL2 [... 1553 0.0
gb|OAY64204.1| putative RNA-dependent RNA polymerase SHL2 [Anana... 1553 0.0
ref|XP_020108971.1| probable RNA-dependent RNA polymerase SHL2 [... 1534 0.0
gb|OAY62820.1| putative RNA-dependent RNA polymerase SHL2 [Anana... 1528 0.0
ref|XP_018678117.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA... 1518 0.0
gb|OVA07789.1| RNA recognition motif domain [Macleaya cordata] 1469 0.0
ref|XP_015885879.1| PREDICTED: RNA-dependent RNA polymerase 6 [Z... 1449 0.0
ref|XP_010254390.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 1441 0.0
ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populu... 1439 0.0
ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populu... 1435 0.0
ref|XP_011039698.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 1433 0.0
gb|APR63701.1| SILENCING DEFECTIVE family protein 1 [Populus tom... 1432 0.0
ref|XP_023881956.1| RNA-dependent RNA polymerase 6 [Quercus sube... 1430 0.0
ref|XP_021597106.1| RNA-dependent RNA polymerase 6 [Manihot escu... 1428 0.0
ref|XP_011026450.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 1427 0.0
ref|XP_012071453.1| RNA-dependent RNA polymerase 6 isoform X1 [J... 1426 0.0
ref|XP_018822243.1| PREDICTED: RNA-dependent RNA polymerase 6 [J... 1426 0.0
>ref|XP_020266835.1| probable RNA-dependent RNA polymerase SHL2 [Asparagus officinalis]
gb|ONK69832.1| uncharacterized protein A4U43_C05F27200 [Asparagus officinalis]
Length = 1174
Score = 1726 bits (4469), Expect = 0.0
Identities = 831/1081 (76%), Positives = 954/1081 (88%), Gaps = 2/1081 (0%)
Frame = +3
Query: 333 FLQFATPAGAQRVLDAAARCELVLGSKPLIARASSDTSYRINRRRSIDPFTFPDARFEIG 512
FLQF TPAGAQR +DAA RCEL++G KP++ ++S+D+ +RINRRR I PF F D FEIG
Sbjct: 93 FLQFGTPAGAQRAIDAAGRCELLVGQKPVVVQSSADSLHRINRRRQISPFVFKDVCFEIG 152
Query: 513 SLTSPTHFLAAWKLDPKPESSVNFLIDPFDNSCKLLFTGDVAFTANGTREFEVIRCNFKL 692
SL P+ F AW+LDPKP+++V FL+DPFD+SCKL+F+ +VAFT GT++ + IRCN KL
Sbjct: 153 SLVGPSEFAVAWRLDPKPDNAVEFLVDPFDSSCKLMFSREVAFTVKGTKDVDFIRCNLKL 212
Query: 693 EFLLRDVMELKIGADGMQHVLMFQLSLGAAPLVYYRTADDDIHNSVEWNLLDDEDPWIRT 872
EFLLRDVME+K+ D M V + Q+ LGAAPL+YYRTADDDIH++ +LLDDEDPWIR+
Sbjct: 213 EFLLRDVMEVKVTTDAMPFVFLIQMGLGAAPLIYYRTADDDIHDTSTGHLLDDEDPWIRS 272
Query: 873 TDFTPSGAIGRCNCYRISMKPRFGPKLKRAMEYMKERRIDGLRPDRPIVFKDEANFGEIA 1052
TDFTP+GAIGRCNCYRISM PRF KL++A+ YM+ERRI+GLRP+RPI+ KDE N G ++
Sbjct: 273 TDFTPNGAIGRCNCYRISMSPRFRGKLEKALAYMRERRIEGLRPERPILVKDEGNPGFVS 332
Query: 1053 TDPFFCFHYKEGVSFANLFMVNALVHKGIFSQHRVTEEFFGLLNGQSELVNDVALRHIYA 1232
+DPFFCFH KEGVSF N+FMVNALVHKGIF+QHR+TEEFFGLL +SE++NDVALRHIY
Sbjct: 333 SDPFFCFHNKEGVSFVNMFMVNALVHKGIFNQHRLTEEFFGLLRKKSEVLNDVALRHIYG 392
Query: 1233 YKKPVFDACRRLKMVQEWLLGFSRLIKIPTASEDNMEVRRLVITPTKAYCLPPEIELANR 1412
YKKP+FDA RLKMVQ+WLL F RLIK P S+DNMEVRRLVITPTKAYCLPPEIELANR
Sbjct: 393 YKKPIFDAYGRLKMVQDWLLKFPRLIKAPIPSDDNMEVRRLVITPTKAYCLPPEIELANR 452
Query: 1413 VLRRYRDMSDRFLRVTFMDEGMQQLNSNVLNFYVAPIVREISNNSPSQKTAMFRRVKNIV 1592
VLR+YRD+SDRFLRVTFMDEGMQ LN +VL+FY APIV+E++ +S SQKT MFRRV++I+
Sbjct: 453 VLRKYRDISDRFLRVTFMDEGMQSLNIHVLSFYPAPIVKEVTISSSSQKTTMFRRVRDIM 512
Query: 1593 NKGFNLCGRKYSFLAFSSNQLRDRSAWFFAEDKHTSVHDITSWMGKFQDKNVAKYAARMG 1772
KGF+LCGRKYSFLAFSSNQLRD+SAWFFAEDK TSV DITSWMGKFQ+KNVAKYAARMG
Sbjct: 513 YKGFHLCGRKYSFLAFSSNQLRDKSAWFFAEDKGTSVQDITSWMGKFQNKNVAKYAARMG 572
Query: 1773 QCFSSTYATVEVPSYEVVPFLPDIKRNTYCFSDGIGKITPDLAMEVAKKLQLTENPPSAY 1952
QCFSSTYATV++ EV LPDI+ YCFSDGIGKITP LA EVA+KL+LTE PPSAY
Sbjct: 573 QCFSSTYATVQLHPGEVNQKLPDIENEKYCFSDGIGKITPALATEVAEKLRLTETPPSAY 632
Query: 1953 QIRYAGYKGVIAVWPGNDDGIRLSLRESMYKFQSEHTMLEVVSWTRFQPGFLNRQIVTLL 2132
QIR+AG KGV+AVWPGN+DGIRLSLR SM KFQS H++LEVVSWTRFQPGFLNRQIVTLL
Sbjct: 633 QIRFAGCKGVVAVWPGNNDGIRLSLRPSMNKFQSSHSVLEVVSWTRFQPGFLNRQIVTLL 692
Query: 2133 SALEVPDDVFARMQDSMVCKLDQMLVNPDVAFDVLTTSCAEQGNVAAMMLSAGFDPQLEP 2312
SAL V DDVF+RMQDSMV KLD+ML++PDVAFDVLT+SCAEQGN+AAMMLSAGF PQ EP
Sbjct: 693 SALGVDDDVFSRMQDSMVSKLDKMLIDPDVAFDVLTSSCAEQGNIAAMMLSAGFTPQTEP 752
Query: 2313 HLKAMLSCIRLSQLKDLSSKARIFVPKGRWLMGCFDELGVLEQGQCFIQASSPSLENCFL 2492
HLKAML CIRLSQLKDLSSKARIFVPKGRWLMGC DELGVLE+GQCFIQ SSPSLENCFL
Sbjct: 753 HLKAMLLCIRLSQLKDLSSKARIFVPKGRWLMGCLDELGVLEEGQCFIQVSSPSLENCFL 812
Query: 2493 KHGSKFSGTKENKQVIVGTVALAKNPCLHPGDVRILEAVDVPGLRHLVDCFVFPQKGDRP 2672
KHGSKFSG+K NKQVIVGT+ALAKNPCLHPGD+RILEAVDVPGL HLVDC VFPQKG+RP
Sbjct: 813 KHGSKFSGSKVNKQVIVGTIALAKNPCLHPGDIRILEAVDVPGLHHLVDCLVFPQKGERP 872
Query: 2673 HSDEASGSDLDGDLYFVTWDENLIPPSRRSWMPMAYTPAQPKLEPRRIVHQDIIDFFVKN 2852
HS+EASGSDLDGDLYFVTWDENLIPPS++SW P+ Y PA+ K EPR+IVHQ I+DFFV+N
Sbjct: 873 HSNEASGSDLDGDLYFVTWDENLIPPSKKSWPPLDYEPAEAKEEPRKIVHQLIVDFFVRN 932
Query: 2853 ISNENLGVICNAHVVHADLSDYGAMDDNCLKLAELAATAVDFPKTGKMVHMPASLKPKLY 3032
+S+ENLGVICNAHVVHADLSDYGAMDD CLKLA+LAA AVDFPKTG V++PAS KPKLY
Sbjct: 933 MSSENLGVICNAHVVHADLSDYGAMDDKCLKLAKLAAIAVDFPKTGVFVNLPASYKPKLY 992
Query: 3033 PDFMDKYDQHSYKSEKILGRLYRKIKDASDEDNSSELISVYQDLPFDENLEVHGASEYLV 3212
PDFM+K + +YKSEKILGRLYRKIK ASDEDNSSELIS Y+DLP+D+ ++ A +YL
Sbjct: 993 PDFMNKDEHITYKSEKILGRLYRKIKSASDEDNSSELISAYEDLPYDQAFDISEAFDYLT 1052
Query: 3213 EAWETKCSYDRQLNALLGQFRVDKEGEVVTGHLCSMGKHNSRKQGEIKERLKNAYYALNK 3392
EAWETKCSYDRQLNALLGQFRVDKEGEVVTGH+ S+G +NSRKQGE+KERLKNAYYALNK
Sbjct: 1053 EAWETKCSYDRQLNALLGQFRVDKEGEVVTGHISSLGSYNSRKQGEVKERLKNAYYALNK 1112
Query: 3393 KYRRAFEDVGTDL--LQLTDEEKNVRYEKKASAWYCVTYHPKWVEKSVAMREADGERVPP 3566
KYRR+FE++G L L L+D+E+N YE KA+AWY VTYHPKWV+KSV M+EADGER+
Sbjct: 1113 KYRRSFEEIGGHLSQLSLSDDERNQIYESKAAAWYQVTYHPKWVKKSVEMKEADGERLGV 1172
Query: 3567 R 3569
R
Sbjct: 1173 R 1173
Score = 96.3 bits (238), Expect = 4e-16
Identities = 51/83 (61%), Positives = 60/83 (72%), Gaps = 5/83 (6%)
Frame = +1
Query: 70 MGSLGSSN-----ASHKDNIITQVSVAGFDAANTTAQSLAQSLEHNLHCVIWRCRLKSSS 234
MGSL SS+ A HKD +ITQVS+AGFDA TTA+SL SLE +L+CVIWR RLKSSS
Sbjct: 1 MGSLDSSSKTQVQAHHKDKVITQVSIAGFDA-QTTAESLHLSLEKSLNCVIWRSRLKSSS 59
Query: 235 TPPDSYPDFDISEDMKKKKQPAR 303
TPPDSYPDF+ K+P +
Sbjct: 60 TPPDSYPDFEFPNPKPTSKKPTK 82
>ref|XP_010921974.1| PREDICTED: probable RNA-dependent RNA polymerase SHL2 [Elaeis
guineensis]
ref|XP_019706451.1| PREDICTED: probable RNA-dependent RNA polymerase SHL2 [Elaeis
guineensis]
ref|XP_019706452.1| PREDICTED: probable RNA-dependent RNA polymerase SHL2 [Elaeis
guineensis]
Length = 1198
Score = 1573 bits (4072), Expect = 0.0
Identities = 760/1120 (67%), Positives = 926/1120 (82%), Gaps = 1/1120 (0%)
Frame = +3
Query: 333 FLQFATPAGAQRVLDAAARCELVLGSKPLIARASSDTSYRINRRRSIDPFTFPDARFEIG 512
F+ FATP A+R ++AA +CEL+L PL A + D+S+RINRRR+ DPF F D EIG
Sbjct: 84 FVHFATPDAAKRAINAAGKCELILNGHPLRANSGIDSSFRINRRRTTDPFRFVDVGVEIG 143
Query: 513 SLTSPTHFLAAWKLDPKPESSVNFLIDPFDNSCKLLFTGDVAFTANGTREFEVIRCNFKL 692
+L S FL AWK P+ V+FLIDPFD C++LF+ + AF +E VI+C+FK+
Sbjct: 144 TLASRDEFLVAWK---GPKLGVDFLIDPFDGCCRILFSKETAFAFKDIKEMAVIKCDFKV 200
Query: 693 EFLLRDVMELKIGADGMQHVLMFQLSLGAAPLVYYRTADDDIHNSVEWNLLDDEDPWIRT 872
EFL+RD+ E+K+ D HV++FQLS + P VYYRTADDDIH + ++LLDDEDPWIRT
Sbjct: 201 EFLVRDINEVKLFTDRYPHVMLFQLS--STPWVYYRTADDDIHVTASFSLLDDEDPWIRT 258
Query: 873 TDFTPSGAIGRCNCYRISMKPRFGPKLKRAMEYMKERRIDGLRPDRPIVFKDEANFGEIA 1052
TDFTP GAI R + YR+S PR+G L++++ Y++ERRI P RP+ ++E FG +
Sbjct: 259 TDFTPGGAISRSSSYRVSFSPRYGRILEKSLAYLRERRIAEHWPKRPLAVREEPEFGTLM 318
Query: 1053 TDPFFCFHYKEGVSFANLFMVNALVHKGIFSQHRVTEEFFGLLNGQSELVNDVALRHIYA 1232
DPFF YKEG+SF+ +F+V+ALVHKGI +QH+++EEFF LL QS+ VN++ALRHI+A
Sbjct: 319 PDPFFSVQYKEGISFSIMFLVDALVHKGIVNQHQLSEEFFALLRSQSDAVNEIALRHIWA 378
Query: 1233 YKKPVFDACRRLKMVQEWLLGFSRLIKIPTASEDNMEVRRLVITPTKAYCLPPEIELANR 1412
YK P+FD +RLK+VQ+WLL +L+K +D+ EVRRLVITPTKAYCLPPE+EL+NR
Sbjct: 379 YKTPIFDPRKRLKLVQDWLLKNPKLLKSSKLLDDSTEVRRLVITPTKAYCLPPEVELSNR 438
Query: 1413 VLRRYRDMSDRFLRVTFMDEGMQQLNSNVLNFYVAPIVREISNNSPSQKTAMFRRVKNIV 1592
VLR Y+ ++DRFLRVTFMDEGMQ LN+NVLN+YVAPIV+E+++NS QKT +FRRV+NI+
Sbjct: 439 VLRNYKKVADRFLRVTFMDEGMQPLNNNVLNYYVAPIVKELTSNSFPQKTTVFRRVRNIL 498
Query: 1593 NKGFNLCGRKYSFLAFSSNQLRDRSAWFFAEDKHTSVHDITSWMGKFQDKNVAKYAARMG 1772
GF+LCGR+YSFLAFSSNQLRDRSAWFFAED +TSV I +WMGKF +KNVAK AARMG
Sbjct: 499 LDGFHLCGRRYSFLAFSSNQLRDRSAWFFAEDSNTSVMAIRNWMGKFANKNVAKCAARMG 558
Query: 1773 QCFSSTYATVEVPSYEVVPFLPDIKRNTYCFSDGIGKITPDLAMEVAKKLQLTENPPSAY 1952
QCFSSTYATV+VP + P LPDI+RN Y FSDGIGKI P+LA+EVA+KLQLTENPPSAY
Sbjct: 559 QCFSSTYATVDVPLDQFNPLLPDIERNGYVFSDGIGKIIPELAIEVAEKLQLTENPPSAY 618
Query: 1953 QIRYAGYKGVIAVWPGNDDGIRLSLRESMYKFQSEHTMLEVVSWTRFQPGFLNRQIVTLL 2132
QIRYAG+KGV+AVWP +DDG+RLSLR SM KF+S HTMLEVVSWTRFQPGFLNRQIVTLL
Sbjct: 619 QIRYAGFKGVVAVWPADDDGVRLSLRPSMNKFESSHTMLEVVSWTRFQPGFLNRQIVTLL 678
Query: 2133 SALEVPDDVFARMQDSMVCKLDQMLVNPDVAFDVLTTSCAEQGNVAAMMLSAGFDPQLEP 2312
S+L V D VF MQDSM+ KL+QMLV+ DVAFDVLT+SCAEQGN AA+MLSAGF PQ+EP
Sbjct: 679 SSLNVADSVFESMQDSMIYKLNQMLVDTDVAFDVLTSSCAEQGNTAAIMLSAGFKPQMEP 738
Query: 2313 HLKAMLSCIRLSQLKDLSSKARIFVPKGRWLMGCFDELGVLEQGQCFIQASSPSLENCFL 2492
HLKAMLSCIR +QL DL +KARIFVPKGRWLMGC DELGVLE GQCFIQ+S PSLENCF+
Sbjct: 739 HLKAMLSCIRSAQLGDLLAKARIFVPKGRWLMGCLDELGVLEHGQCFIQSSIPSLENCFM 798
Query: 2493 KHGSKFSGTKENKQVIVGTVALAKNPCLHPGDVRILEAVDVPGLRHLVDCFVFPQKGDRP 2672
KHGS+FS K+N+QVIVGTVA+AKNPCLHPGD+RILEAVDVP L HLVDC VFPQKGDRP
Sbjct: 799 KHGSRFSLLKKNRQVIVGTVAIAKNPCLHPGDIRILEAVDVPSLHHLVDCLVFPQKGDRP 858
Query: 2673 HSDEASGSDLDGDLYFVTWDENLIPPSRRSWMPMAYTPAQPKLEPRRIVHQDIIDFFVKN 2852
H++EASGSDLDGDLYFVTWDENLIPPS++SW+PM YTPA+PKL+PR + +DIIDFF+KN
Sbjct: 859 HANEASGSDLDGDLYFVTWDENLIPPSKKSWIPMDYTPAEPKLQPRAVTPRDIIDFFLKN 918
Query: 2853 ISNENLGVICNAHVVHADLSDYGAMDDNCLKLAELAATAVDFPKTGKMVHMPASLKPKLY 3032
+ NENLGVICNAHVVHAD S+YGA+D+NCL+LAELAATAVDFPKTGK+V MP+ LKPK+Y
Sbjct: 919 MVNENLGVICNAHVVHADRSEYGALDENCLQLAELAATAVDFPKTGKLVTMPSGLKPKVY 978
Query: 3033 PDFMDKYDQHSYKSEKILGRLYRKIKDASDEDNSSELISVYQDLPFDENLEVHGASEYLV 3212
PDFM K D SYKS+K+LGRLYR IK A+D D S+EL ++LP+D +L++ GAS YL
Sbjct: 979 PDFMGKDDHMSYKSQKVLGRLYRNIKYAADNDVSTELPCTAEELPYDTDLDIPGASYYLA 1038
Query: 3213 EAWETKCSYDRQLNALLGQFRVDKEGEVVTGHLCSMGKHNSRKQGEIKERLKNAYYALNK 3392
+AW+ KCSYD QLNALL Q+RV EGEVVTGH+ S+ K+NSRKQGE+KERLKNAY AL+K
Sbjct: 1039 DAWQNKCSYDGQLNALLAQYRVRSEGEVVTGHIWSLPKYNSRKQGELKERLKNAYSALHK 1098
Query: 3393 KYRRAFEDVGTDLLQLTDEEKNVRYEKKASAWYCVTYHPKWVEKSVAMREADGERVPPRL 3572
++RR FED+G D QLTD+EK+V YE++ASAWY VTYHP+W+++S ++E DG+ VP RL
Sbjct: 1099 EFRRIFEDMGPDFQQLTDDEKSVSYEQRASAWYQVTYHPRWIKRSGEIKEPDGDVVPARL 1158
Query: 3573 SFAWIPADYLVRIKIKSRD-GKVGTGKPIDSLASYLYERM 3689
SFAW+ ADYLVRIKI S+D K +PID+LA YL ER+
Sbjct: 1159 SFAWVAADYLVRIKISSQDRQKFDNSRPIDTLACYLSERI 1198
Score = 67.0 bits (162), Expect = 3e-07
Identities = 34/79 (43%), Positives = 51/79 (64%), Gaps = 3/79 (3%)
Frame = +1
Query: 70 MGSLGSSNASHKDNIITQVSVAGFDAANTTAQSLAQSLEHNLHCVIWRCRLKSSSTPPDS 249
MGSLG+ K+ +++QVS GFD +A+ L +EH +IWRCR+K+S TPP+S
Sbjct: 1 MGSLGAQERDQKELVVSQVSFGGFDE-RVSAKDLTDFMEHEAG-LIWRCRVKNSWTPPES 58
Query: 250 YPDF---DISEDMKKKKQP 297
YP+F D+S+ ++K P
Sbjct: 59 YPNFNVLDVSDVLRKDDHP 77
>ref|XP_008778879.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-dependent RNA polymerase
SHL2 [Phoenix dactylifera]
Length = 1198
Score = 1572 bits (4071), Expect = 0.0
Identities = 764/1120 (68%), Positives = 926/1120 (82%), Gaps = 1/1120 (0%)
Frame = +3
Query: 333 FLQFATPAGAQRVLDAAARCELVLGSKPLIARASSDTSYRINRRRSIDPFTFPDARFEIG 512
F+ FAT A+R ++AA +CELVL PL A + +D+S+RI+RRR++DPF F D EIG
Sbjct: 84 FVHFATLDAAKRAINAAGKCELVLQGCPLRANSGTDSSFRISRRRTMDPFRFTDVGVEIG 143
Query: 513 SLTSPTHFLAAWKLDPKPESSVNFLIDPFDNSCKLLFTGDVAFTANGTREFEVIRCNFKL 692
+L S FL AWK P+S V+FLIDPFD C++LF+ + AF +E V++C+FK+
Sbjct: 144 TLASRDEFLVAWK---GPKSGVDFLIDPFDGRCRILFSKETAFAFKDIKEMAVLKCDFKV 200
Query: 693 EFLLRDVMELKIGADGMQHVLMFQLSLGAAPLVYYRTADDDIHNSVEWNLLDDEDPWIRT 872
EFL RD+ E+K+ D ++FQL+ + P VYYRTADDDI + ++LLDDEDPWIRT
Sbjct: 201 EFLARDINEVKLFTDQYPPAMLFQLA--STPWVYYRTADDDILVTAPFSLLDDEDPWIRT 258
Query: 873 TDFTPSGAIGRCNCYRISMKPRFGPKLKRAMEYMKERRIDGLRPDRPIVFKDEANFGEIA 1052
TDFTP GAI RC YRIS PR+G LK ++ Y+KERRI RP RP+V +E +FG +
Sbjct: 259 TDFTPGGAISRCCSYRISFSPRYGRILKESLAYLKERRIAEHRPKRPLVVLEEPDFGTLM 318
Query: 1053 TDPFFCFHYKEGVSFANLFMVNALVHKGIFSQHRVTEEFFGLLNGQSELVNDVALRHIYA 1232
DPFF +KEG+SF+ +F+V+ALVHKGI +QH+++EEFF LL QS+ +N+ ALRHI+A
Sbjct: 319 PDPFFSVQHKEGISFSIMFLVDALVHKGIVNQHQLSEEFFALLRSQSDSMNETALRHIWA 378
Query: 1233 YKKPVFDACRRLKMVQEWLLGFSRLIKIPTASEDNMEVRRLVITPTKAYCLPPEIELANR 1412
YK P+FDACRRLK+VQ+WLL + +K S+D+ EVRRLVITPTKAYCLPP +EL+NR
Sbjct: 379 YKTPIFDACRRLKLVQDWLLKNPKFLKSSKLSDDSSEVRRLVITPTKAYCLPPGVELSNR 438
Query: 1413 VLRRYRDMSDRFLRVTFMDEGMQQLNSNVLNFYVAPIVREISNNSPSQKTAMFRRVKNIV 1592
VLR Y++++DRFLRVTFMDEGMQ+LN+NVLN+YVAPIV+E+++NS QKT +FRRV++I+
Sbjct: 439 VLRNYKEVADRFLRVTFMDEGMQKLNNNVLNYYVAPIVKELTSNSFPQKTTVFRRVRSIL 498
Query: 1593 NKGFNLCGRKYSFLAFSSNQLRDRSAWFFAEDKHTSVHDITSWMGKFQDKNVAKYAARMG 1772
GF+LCGR+YSFLAFSSNQLRDRSAWFFAED +TSV DI WMGKF +KNVAK AARMG
Sbjct: 499 IDGFHLCGRRYSFLAFSSNQLRDRSAWFFAEDSNTSVEDIRDWMGKFANKNVAKCAARMG 558
Query: 1773 QCFSSTYATVEVPSYEVVPFLPDIKRNTYCFSDGIGKITPDLAMEVAKKLQLTENPPSAY 1952
QCFSSTYATV+VP +V P LPDI+R Y FSDGIGKITP+LAMEVA+KLQLTENPPSAY
Sbjct: 559 QCFSSTYATVDVPPDQVNPLLPDIERKGYIFSDGIGKITPELAMEVAEKLQLTENPPSAY 618
Query: 1953 QIRYAGYKGVIAVWPGNDDGIRLSLRESMYKFQSEHTMLEVVSWTRFQPGFLNRQIVTLL 2132
QIRYAG KGV+AVWPG+DDGIRLSLR SM KF+S HTMLEVVSWTRFQPGFLNRQIVTLL
Sbjct: 619 QIRYAGTKGVVAVWPGDDDGIRLSLRPSMNKFESSHTMLEVVSWTRFQPGFLNRQIVTLL 678
Query: 2133 SALEVPDDVFARMQDSMVCKLDQMLVNPDVAFDVLTTSCAEQGNVAAMMLSAGFDPQLEP 2312
S+L VPD VFA MQDSM+ KL+QMLV+ DVAFDVLT+SCAEQGN AA+MLSAGF PQ EP
Sbjct: 679 SSLNVPDSVFASMQDSMIYKLNQMLVDTDVAFDVLTSSCAEQGNTAAIMLSAGFKPQTEP 738
Query: 2313 HLKAMLSCIRLSQLKDLSSKARIFVPKGRWLMGCFDELGVLEQGQCFIQASSPSLENCFL 2492
HLKAMLSCIR +QL DL +KAR FVPKGRWLMGC DELGVLE GQCFIQ+S PSLENCF+
Sbjct: 739 HLKAMLSCIRSAQLGDLLAKARXFVPKGRWLMGCLDELGVLEHGQCFIQSSIPSLENCFM 798
Query: 2493 KHGSKFSGTKENKQVIVGTVALAKNPCLHPGDVRILEAVDVPGLRHLVDCFVFPQKGDRP 2672
KHGS+FSG K+N+QVIVGTVA+AKNPCLHPGD+RILEAVDVP L HLVDC VFPQKGDRP
Sbjct: 799 KHGSRFSGIKKNRQVIVGTVAIAKNPCLHPGDIRILEAVDVPSLHHLVDCLVFPQKGDRP 858
Query: 2673 HSDEASGSDLDGDLYFVTWDENLIPPSRRSWMPMAYTPAQPKLEPRRIVHQDIIDFFVKN 2852
H++EASGSDLDGDLYFVTWDENLIPP ++SW+PM YTPA+PKLEPR + +DIIDFF+KN
Sbjct: 859 HANEASGSDLDGDLYFVTWDENLIPPGKKSWIPMDYTPAKPKLEPRGVTPRDIIDFFLKN 918
Query: 2853 ISNENLGVICNAHVVHADLSDYGAMDDNCLKLAELAATAVDFPKTGKMVHMPASLKPKLY 3032
+ NENLGVICNAHVVHAD S+YGA+D+ CL+LAELAATAVDFPKTGK+V MP +LKPK+Y
Sbjct: 919 MVNENLGVICNAHVVHADCSEYGALDEKCLQLAELAATAVDFPKTGKLVMMPPALKPKVY 978
Query: 3033 PDFMDKYDQHSYKSEKILGRLYRKIKDASDEDNSSELISVYQDLPFDENLEVHGASEYLV 3212
PDFM K D SY+S+K+LG LYR IKDA+D D SSEL+ ++LP+D +L++ GAS+YL
Sbjct: 979 PDFMGKDDHMSYQSQKVLGILYRNIKDATDNDVSSELLCTAEELPYDADLDIPGASDYLA 1038
Query: 3213 EAWETKCSYDRQLNALLGQFRVDKEGEVVTGHLCSMGKHNSRKQGEIKERLKNAYYALNK 3392
+AW +CSYD QLNALL Q+RV EGEVVTGH+ S+ K+NSRKQGE+KERL+NAY AL+K
Sbjct: 1039 DAWXKQCSYDGQLNALLAQYRVRSEGEVVTGHIWSLPKYNSRKQGELKERLRNAYSALHK 1098
Query: 3393 KYRRAFEDVGTDLLQLTDEEKNVRYEKKASAWYCVTYHPKWVEKSVAMREADGERVPPRL 3572
++RR FE++G D QLTD+EK + YE+KASAWY VTY P+W++K + EADG+ VP RL
Sbjct: 1099 EFRRIFENMGPDFQQLTDDEKCLSYEQKASAWYQVTYQPRWIKKLSEIEEADGDAVPARL 1158
Query: 3573 SFAWIPADYLVRIKIKSRD-GKVGTGKPIDSLASYLYERM 3689
SFAWI ADYLVRIKI+S D G+ +PID+LA YL ER+
Sbjct: 1159 SFAWIAADYLVRIKIRSGDRGRFDNKRPIDTLACYLSERI 1198
Score = 68.6 bits (166), Expect = 1e-07
Identities = 34/75 (45%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
Frame = +1
Query: 70 MGSLGSSNASHKDNIITQVSVAGFDAANTTAQSLAQSLEHNLHCVIWRCRLKSSSTPPDS 249
MGSLG+ K+ +++QVS GFD +A+ L LEH +IWRCR+K+S TPP+S
Sbjct: 1 MGSLGADERDQKELVVSQVSFGGFDE-RVSAKDLTDFLEHEAG-LIWRCRVKNSWTPPES 58
Query: 250 YPDFDISE--DMKKK 288
YPD+D+ + D+++K
Sbjct: 59 YPDYDVLDVSDVRRK 73
>ref|XP_020098906.1| probable RNA-dependent RNA polymerase SHL2 [Ananas comosus]
ref|XP_020098907.1| probable RNA-dependent RNA polymerase SHL2 [Ananas comosus]
Length = 1234
Score = 1553 bits (4022), Expect = 0.0
Identities = 755/1125 (67%), Positives = 925/1125 (82%), Gaps = 6/1125 (0%)
Frame = +3
Query: 333 FLQFATPAGAQRVLDAAARCELVLGSKPLIARASSDTSYRINRRRSIDPFTFPDARFEIG 512
F+ FA+P A+R ++AA RC+LVL +PL A ++++S+R +RRR+ DPF F D R +IG
Sbjct: 113 FVHFASPDAAKRAMNAAGRCDLVLRGRPLRAHCAAESSFRASRRRTTDPFKFSDVRLDIG 172
Query: 513 SLTSPTHFLAAWKLDPKPESSVNFLIDPFDNSCKLLFTGDVAFTANGTREFEVIRCNFKL 692
SL + F A+W P + +F++DPFD CK+LF + AF GTR+ IRC+FK+
Sbjct: 173 SLVARDDFCASWTC-PSGSGAADFVVDPFDGLCKILFARETAFAFKGTRDAATIRCDFKI 231
Query: 693 EFLLRDVMELKIGADGMQHVLMFQLSLGAAPLVYYRTADDDIHNSVEWNLLDDEDPWIRT 872
EFL RD+ ++++ D ++ QL+ +AP V YRTADDDI+ SV +NLLDDEDPWIRT
Sbjct: 232 EFLARDIADVRLYTDRAPLAMLLQLT--SAPFVSYRTADDDIYTSVPFNLLDDEDPWIRT 289
Query: 873 TDFTPSGAIGRCNCYRISMKPRFGPKLKRAMEYMKERRIDGLRPDRPIVFKDEANFG-EI 1049
TDFTP+GA+GRC+ Y+IS+ PRFG KL+RA++Y+++RRI RP+RP+ + E +FG
Sbjct: 290 TDFTPTGAVGRCSSYKISLSPRFGAKLERALDYLRKRRIPDYRPNRPLAVRPEPDFGFSP 349
Query: 1050 ATDPFFCFHYKEGVSFANLFMVNALVHKGIFSQHRVTEEFFGLLNGQSELVNDVALRHIY 1229
ATD FF H+ EGV F LF+VNALVHKGI +QH+++++FFGLL GQS +VN+ ALRHI+
Sbjct: 350 ATDHFFSIHHAEGVGFPILFLVNALVHKGIVNQHQLSDQFFGLLRGQSGVVNETALRHIW 409
Query: 1230 AYKKPVFDACRRLKMVQEWLLGFSRLIKIPTASEDNMEVRRLVITPTKAYCLPPEIELAN 1409
+YK+P+FDA RRLK+VQEWLL +L++ ++DN EVRRLVITPTKAYC+PP IEL+N
Sbjct: 410 SYKRPIFDAYRRLKLVQEWLLNNPKLLRSSKLADDNAEVRRLVITPTKAYCIPPAIELSN 469
Query: 1410 RVLRRYRDMSDRFLRVTFMDEGMQQLNSNVLNFYVAPIVREISNNSPSQKTAMFRRVKNI 1589
RVLRRY++++DRFLRVTF DEGMQQLN++VLN+YVAPIVR+I++NS QKT +F+RVK+I
Sbjct: 470 RVLRRYKEVADRFLRVTFTDEGMQQLNNSVLNYYVAPIVRDITSNSYQQKTTVFKRVKSI 529
Query: 1590 VNKGFNLCGRKYSFLAFSSNQLRDRSAWFFAEDKHTSVHDITSWMGKFQDKNVAKYAARM 1769
+ GF LCGR+YSFLAFSSNQLRDRSAWFFAED T+V IT WMG+F ++NVAK AARM
Sbjct: 530 LMDGFYLCGRRYSFLAFSSNQLRDRSAWFFAEDSKTTVAAITKWMGRFSNRNVAKCAARM 589
Query: 1770 GQCFSSTYATVEVPSYEVVPFLPDIKRNTYCFSDGIGKITPDLAMEVAKKLQLTENPPSA 1949
GQCFSSTYATVEVP EV P LPDI+ N Y FSDGIGKITPDLAMEVA+KL+LT+NPPSA
Sbjct: 590 GQCFSSTYATVEVPLREVNPVLPDIEGNGYIFSDGIGKITPDLAMEVAEKLKLTDNPPSA 649
Query: 1950 YQIRYAGYKGVIAVWPGNDDGIRLSLRESMYKFQSEHTMLEVVSWTRFQPGFLNRQIVTL 2129
YQIRYAG KGV+AVWPG+ DGIRLSLR SM KF+S HT+LEVVSW+RFQPGFLNRQI+TL
Sbjct: 650 YQIRYAGCKGVVAVWPGDVDGIRLSLRPSMNKFESNHTVLEVVSWSRFQPGFLNRQIITL 709
Query: 2130 LSALEVPDDVFARMQDSMVCKLDQMLVNPDVAFDVLTTSCAEQGNVAAMMLSAGFDPQLE 2309
LS+L VPD VFARMQ+SM+CKL++MLV+ DVAF+VLTTSCAEQGN AAMMLSAGF PQ E
Sbjct: 710 LSSLSVPDSVFARMQESMICKLNEMLVDTDVAFEVLTTSCAEQGNTAAMMLSAGFKPQTE 769
Query: 2310 PHLKAMLSCIRLSQLKDLSSKARIFVPKGRWLMGCFDELGVLEQGQCFIQASSPSLENCF 2489
PHLKAMLSCIR +QL DL +K RIFVPKGRWLMGC DELGVLE GQCFIQ SSPSL+NCF
Sbjct: 770 PHLKAMLSCIRSAQLGDLLAKTRIFVPKGRWLMGCLDELGVLEHGQCFIQMSSPSLQNCF 829
Query: 2490 LKHGSKFSGTKENKQVIVGTVALAKNPCLHPGDVRILEAVDVPGLRHLVDCFVFPQKGDR 2669
+KHG++FSGTK N+QVIVG V +AKNPCLHPGDVRILEAVDVPGL LVDC VFPQKGDR
Sbjct: 830 IKHGTRFSGTKMNRQVIVGAVVIAKNPCLHPGDVRILEAVDVPGLHQLVDCLVFPQKGDR 889
Query: 2670 PHSDEASGSDLDGDLYFVTWDENLIPPSRRSWMPMAYTPAQPKLEPRRIVHQDIIDFFVK 2849
PH++EASGSDLDGDLYFVTWD +LIPP ++SW+PM YT A+ K PR + QDIIDFF+K
Sbjct: 890 PHANEASGSDLDGDLYFVTWDGDLIPPGKKSWVPMDYTAAEAKQLPRTVSPQDIIDFFLK 949
Query: 2850 NISNENLGVICNAHVVHADLSDYGAMDDNCLKLAELAATAVDFPKTGKMVHMPASLKPKL 3029
N+ NENLGVICNAHVVHADLS+YGAMD+ CL+LAELAATAVDFPKTGK+V MP +L+PKL
Sbjct: 950 NMVNENLGVICNAHVVHADLSEYGAMDEKCLQLAELAATAVDFPKTGKLVTMPPNLRPKL 1009
Query: 3030 YPDFMDKYDQHSYKSEKILGRLYRKIKDASDEDNSSELISV----YQDLPFDENLEVHGA 3197
YPDFM K D SYKSEKILG+LYR+I+DAS +D SS + ++D+ +D +LEV GA
Sbjct: 1010 YPDFMGKDDHMSYKSEKILGQLYREIRDASCDDPSSSSSAAQACSWEDVSYDTDLEVPGA 1069
Query: 3198 SEYLVEAWETKCSYDRQLNALLGQFRVDKEGEVVTGHLCSMGKHNSRKQGEIKERLKNAY 3377
S+YL +AW KC+YD QLNALLGQ++V EGEVVTGH+ SM K+NSRKQGE+KERLKNAY
Sbjct: 1070 SDYLFDAWNCKCAYDGQLNALLGQYKVCSEGEVVTGHIWSMPKNNSRKQGELKERLKNAY 1129
Query: 3378 YALNKKYRRAFEDVGTDLLQLTDEEKNVRYEKKASAWYCVTYHPKWVEKSVAMREADGER 3557
AL K++R FE G D +L+D+EK+V YE+KASAWY VTYHPKW+ KS MRE +GE
Sbjct: 1130 TALRKEFRNVFETAGPDFNELSDDEKSVWYEQKASAWYQVTYHPKWLRKSCEMRELEGEV 1189
Query: 3558 VPPRLSFAWIPADYLVRIKIKSRD-GKVGTGKPIDSLASYLYERM 3689
VP RLSFAWI ADYLVRIK++ +D K+ +P+D+LA YL +R+
Sbjct: 1190 VPTRLSFAWIAADYLVRIKVRCQDKSKLNQQRPVDALAVYLSDRI 1234
>gb|OAY64204.1| putative RNA-dependent RNA polymerase SHL2 [Ananas comosus]
Length = 1234
Score = 1553 bits (4020), Expect = 0.0
Identities = 755/1125 (67%), Positives = 925/1125 (82%), Gaps = 6/1125 (0%)
Frame = +3
Query: 333 FLQFATPAGAQRVLDAAARCELVLGSKPLIARASSDTSYRINRRRSIDPFTFPDARFEIG 512
F+ FA+P A+R ++AA RC+LVL +PL A ++++S+R +RRR+ DPF F D R +IG
Sbjct: 113 FVHFASPDAAKRAMNAAGRCDLVLRGRPLRAHCAAESSFRASRRRTTDPFKFSDVRLDIG 172
Query: 513 SLTSPTHFLAAWKLDPKPESSVNFLIDPFDNSCKLLFTGDVAFTANGTREFEVIRCNFKL 692
SL + F A+W P + +F++DPFD CK+LF + AF GTR+ IRC+FK+
Sbjct: 173 SLVARDDFCASWTC-PSGSGAADFVVDPFDGLCKILFARETAFAFKGTRDAATIRCDFKI 231
Query: 693 EFLLRDVMELKIGADGMQHVLMFQLSLGAAPLVYYRTADDDIHNSVEWNLLDDEDPWIRT 872
EFL RD+ ++++ D ++ QL+ +AP V YRTADDDI+ SV +NLLDDEDPWIRT
Sbjct: 232 EFLARDIADVRLYTDRAPLAMLLQLT--SAPFVSYRTADDDIYTSVPFNLLDDEDPWIRT 289
Query: 873 TDFTPSGAIGRCNCYRISMKPRFGPKLKRAMEYMKERRIDGLRPDRPIVFKDEANFG-EI 1049
TDFTP+GA+GRC+ Y+IS+ PRFG KL+RA++Y+++RRI RP+RP+ + E +FG
Sbjct: 290 TDFTPTGAVGRCSSYKISLSPRFGAKLERALDYLRKRRIPDYRPNRPLAVRPEPDFGFSP 349
Query: 1050 ATDPFFCFHYKEGVSFANLFMVNALVHKGIFSQHRVTEEFFGLLNGQSELVNDVALRHIY 1229
ATD FF H+ EGV F LF+VNALVHKGI +QH+++++FFGLL GQS +VN+ ALRHI+
Sbjct: 350 ATDHFFSIHHAEGVGFPILFLVNALVHKGIVNQHQLSDQFFGLLRGQSGVVNETALRHIW 409
Query: 1230 AYKKPVFDACRRLKMVQEWLLGFSRLIKIPTASEDNMEVRRLVITPTKAYCLPPEIELAN 1409
+YK+P+FDA RRLK+VQEWLL +L++ ++DN EVRRLVITPTKAYC+PP IEL+N
Sbjct: 410 SYKRPIFDAYRRLKLVQEWLLNNPKLLRSSKLADDNAEVRRLVITPTKAYCIPPAIELSN 469
Query: 1410 RVLRRYRDMSDRFLRVTFMDEGMQQLNSNVLNFYVAPIVREISNNSPSQKTAMFRRVKNI 1589
RVLRRY++++DRFLRVTF DEGMQQLN++VLN+YVAPIVR+I++NS QKT +F+RVK+I
Sbjct: 470 RVLRRYKEVADRFLRVTFTDEGMQQLNNSVLNYYVAPIVRDITSNSYQQKTTVFKRVKSI 529
Query: 1590 VNKGFNLCGRKYSFLAFSSNQLRDRSAWFFAEDKHTSVHDITSWMGKFQDKNVAKYAARM 1769
+ GF LCGR+YSFLAFSSNQLRDRSAWFFAED T+V IT WMG+F ++NVAK AARM
Sbjct: 530 LMDGFYLCGRRYSFLAFSSNQLRDRSAWFFAEDSKTTVAAITKWMGRFSNRNVAKCAARM 589
Query: 1770 GQCFSSTYATVEVPSYEVVPFLPDIKRNTYCFSDGIGKITPDLAMEVAKKLQLTENPPSA 1949
GQCFSSTYATVEVP EV P LPDI+ N Y FSDGIGKITPDLAMEVA+KL+LT+NPPSA
Sbjct: 590 GQCFSSTYATVEVPLREVNPVLPDIEGNGYIFSDGIGKITPDLAMEVAEKLKLTDNPPSA 649
Query: 1950 YQIRYAGYKGVIAVWPGNDDGIRLSLRESMYKFQSEHTMLEVVSWTRFQPGFLNRQIVTL 2129
YQIRYAG KGV+AVWPG+ DGIRLSLR SM KF+S HT+LEVVSW+RFQPGFLNRQI+TL
Sbjct: 650 YQIRYAGCKGVVAVWPGDVDGIRLSLRLSMNKFESNHTVLEVVSWSRFQPGFLNRQIITL 709
Query: 2130 LSALEVPDDVFARMQDSMVCKLDQMLVNPDVAFDVLTTSCAEQGNVAAMMLSAGFDPQLE 2309
LS+L VPD VFARMQ+SM+CKL++MLV+ DVAF+VLTTSCAEQGN AAMMLSAGF PQ E
Sbjct: 710 LSSLSVPDSVFARMQESMICKLNEMLVDTDVAFEVLTTSCAEQGNTAAMMLSAGFKPQTE 769
Query: 2310 PHLKAMLSCIRLSQLKDLSSKARIFVPKGRWLMGCFDELGVLEQGQCFIQASSPSLENCF 2489
PHLKAMLSCIR +QL DL +K RIFVPKGRWLMGC DELGVLE GQCFIQ SSPSL+NCF
Sbjct: 770 PHLKAMLSCIRSAQLGDLLAKTRIFVPKGRWLMGCLDELGVLEHGQCFIQMSSPSLQNCF 829
Query: 2490 LKHGSKFSGTKENKQVIVGTVALAKNPCLHPGDVRILEAVDVPGLRHLVDCFVFPQKGDR 2669
+KHG++FSGTK N+QVIVG V +AKNPCLHPGDVRILEAVDVPGL LVDC VFPQKGDR
Sbjct: 830 IKHGTRFSGTKMNRQVIVGAVVIAKNPCLHPGDVRILEAVDVPGLHQLVDCLVFPQKGDR 889
Query: 2670 PHSDEASGSDLDGDLYFVTWDENLIPPSRRSWMPMAYTPAQPKLEPRRIVHQDIIDFFVK 2849
PH++EASGSDLDGDLYFVTWD +LIPP ++SW+PM YT A+ K PR + QDIIDFF+K
Sbjct: 890 PHANEASGSDLDGDLYFVTWDGDLIPPGKKSWVPMDYTAAEAKQLPRTVSPQDIIDFFLK 949
Query: 2850 NISNENLGVICNAHVVHADLSDYGAMDDNCLKLAELAATAVDFPKTGKMVHMPASLKPKL 3029
N+ NENLGVICNAHVVHADLS+YGAMD+ CL+LAELAATAVDFPKTGK+V MP +L+PKL
Sbjct: 950 NMVNENLGVICNAHVVHADLSEYGAMDEKCLQLAELAATAVDFPKTGKLVTMPPNLRPKL 1009
Query: 3030 YPDFMDKYDQHSYKSEKILGRLYRKIKDASDEDNSSELISV----YQDLPFDENLEVHGA 3197
YPDFM K D SYKSEKILG+LYR+I+DAS +D SS + ++D+ +D +LEV GA
Sbjct: 1010 YPDFMGKDDHMSYKSEKILGQLYREIRDASCDDPSSSSSAAQACSWEDVSYDTDLEVPGA 1069
Query: 3198 SEYLVEAWETKCSYDRQLNALLGQFRVDKEGEVVTGHLCSMGKHNSRKQGEIKERLKNAY 3377
S+YL +AW KC+YD QLNALLGQ++V EGEVVTGH+ SM K+NSRKQGE+KERLKNAY
Sbjct: 1070 SDYLFDAWNCKCAYDGQLNALLGQYKVCSEGEVVTGHIWSMPKNNSRKQGELKERLKNAY 1129
Query: 3378 YALNKKYRRAFEDVGTDLLQLTDEEKNVRYEKKASAWYCVTYHPKWVEKSVAMREADGER 3557
AL K++R FE G D +L+D+EK+V YE+KASAWY VTYHPKW+ KS MRE +GE
Sbjct: 1130 TALRKEFRNVFETAGPDFNELSDDEKSVWYEQKASAWYQVTYHPKWLRKSCEMRELEGEV 1189
Query: 3558 VPPRLSFAWIPADYLVRIKIKSRD-GKVGTGKPIDSLASYLYERM 3689
VP RLSFAWI ADYLVRIK++ +D K+ +P+D+LA YL +R+
Sbjct: 1190 VPTRLSFAWIAADYLVRIKVRCQDKSKLNQQRPVDALAVYLSDRI 1234
>ref|XP_020108971.1| probable RNA-dependent RNA polymerase SHL2 [Ananas comosus]
Length = 1232
Score = 1534 bits (3971), Expect = 0.0
Identities = 746/1125 (66%), Positives = 917/1125 (81%), Gaps = 6/1125 (0%)
Frame = +3
Query: 333 FLQFATPAGAQRVLDAAARCELVLGSKPLIARASSDTSYRINRRRSIDPFTFPDARFEIG 512
F+ FA+P A+R ++AA RC+LVLG +PL A ++++S+R++RRR+ DPF F D R +IG
Sbjct: 111 FVHFASPDAAKRAMNAAGRCDLVLGGRPLRAHCAAESSFRVSRRRTTDPFKFSDVRLDIG 170
Query: 513 SLTSPTHFLAAWKLDPKPESSVNFLIDPFDNSCKLLFTGDVAFTANGTREFEVIRCNFKL 692
SL + F A+W P + +F++DPFD CK+LF + AF GTR+ IRC+FK+
Sbjct: 171 SLLARDDFCASWTC-PSGSGAADFVVDPFDGLCKILFARETAFAFKGTRDAATIRCDFKI 229
Query: 693 EFLLRDVMELKIGADGMQHVLMFQLSLGAAPLVYYRTADDDIHNSVEWNLLDDEDPWIRT 872
EFL RD+ E+++ D ++ QL+ +AP + YRTADDDI+ SV +NLLDDEDPWIRT
Sbjct: 230 EFLARDIAEVRLYTDRASLAMLLQLT--SAPYISYRTADDDIYTSVPFNLLDDEDPWIRT 287
Query: 873 TDFTPSGAIGRCNCYRISMKPRFGPKLKRAMEYMKERRIDGLRPDRPIVFKDEANFG-EI 1049
TDF+P+GA+GRC+ Y+IS+ PRFG KL+RA++Y+++RRI RP+R +V + E +FG
Sbjct: 288 TDFSPTGAVGRCSSYKISLSPRFGGKLERALDYLRKRRIPDYRPNRQLVVRPEPDFGFSP 347
Query: 1050 ATDPFFCFHYKEGVSFANLFMVNALVHKGIFSQHRVTEEFFGLLNGQSELVNDVALRHIY 1229
ATD FF H+ EGV F LF+VNALVHKGI +QH+++++FFGLL GQ+ +VN+ ALRHI+
Sbjct: 348 ATDHFFSIHHAEGVGFPILFLVNALVHKGIVNQHQLSDQFFGLLRGQNGVVNETALRHIW 407
Query: 1230 AYKKPVFDACRRLKMVQEWLLGFSRLIKIPTASEDNMEVRRLVITPTKAYCLPPEIELAN 1409
+YK+P+FDA RRLK+VQEWLL +L++ ++ EVRRLVITPTKAYC+PP IEL+N
Sbjct: 408 SYKRPIFDAYRRLKLVQEWLLNNPKLLRSSKLADYYAEVRRLVITPTKAYCIPPAIELSN 467
Query: 1410 RVLRRYRDMSDRFLRVTFMDEGMQQLNSNVLNFYVAPIVREISNNSPSQKTAMFRRVKNI 1589
RVLRRY++++DRFLRVTF DEGMQQLN++VLN+YVAPIV+EI++NS QKT +F+RVK+I
Sbjct: 468 RVLRRYKEVADRFLRVTFTDEGMQQLNNSVLNYYVAPIVKEITSNSYQQKTTVFKRVKSI 527
Query: 1590 VNKGFNLCGRKYSFLAFSSNQLRDRSAWFFAEDKHTSVHDITSWMGKFQDKNVAKYAARM 1769
+ GF LCGRKYSFLAFSSNQLRDRSAWFFAED T+V IT WMG+F D+NVAK AAR+
Sbjct: 528 LEDGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDSKTTVAAITKWMGRFSDRNVAKCAARI 587
Query: 1770 GQCFSSTYATVEVPSYEVVPFLPDIKRNTYCFSDGIGKITPDLAMEVAKKLQLTENPPSA 1949
GQCFSSTYATVEVP EV P LPDI+ N Y FSDGIGKITPDLAMEVA+KL+LT+NPPSA
Sbjct: 588 GQCFSSTYATVEVPLREVNPVLPDIEGNRYIFSDGIGKITPDLAMEVAEKLKLTDNPPSA 647
Query: 1950 YQIRYAGYKGVIAVWPGNDDGIRLSLRESMYKFQSEHTMLEVVSWTRFQPGFLNRQIVTL 2129
YQIRYAG KGV+AVWPG++ GIRLSLR SM KF+S HT+LEVVSW+RFQPGFLNRQI+TL
Sbjct: 648 YQIRYAGCKGVVAVWPGDEIGIRLSLRPSMNKFESNHTVLEVVSWSRFQPGFLNRQIITL 707
Query: 2130 LSALEVPDDVFARMQDSMVCKLDQMLVNPDVAFDVLTTSCAEQGNVAAMMLSAGFDPQLE 2309
LS+L VPD VFARMQDSM+CKL++MLV+ DVAF+VLTTSCAEQGN AAMMLSAGF PQ E
Sbjct: 708 LSSLSVPDSVFARMQDSMICKLNEMLVDTDVAFEVLTTSCAEQGNTAAMMLSAGFKPQTE 767
Query: 2310 PHLKAMLSCIRLSQLKDLSSKARIFVPKGRWLMGCFDELGVLEQGQCFIQASSPSLENCF 2489
PHLKAMLSCIR +QL DL K RIFVPKGRWLMGC DEL VLE GQCFIQ SSPSL+NCF
Sbjct: 768 PHLKAMLSCIRSAQLGDLLDKTRIFVPKGRWLMGCLDELAVLEHGQCFIQTSSPSLQNCF 827
Query: 2490 LKHGSKFSGTKENKQVIVGTVALAKNPCLHPGDVRILEAVDVPGLRHLVDCFVFPQKGDR 2669
+KHG++FS TK N+Q+IVG V +AKNPCLHPGDVRILEAVDVP L LVDC VFPQKGDR
Sbjct: 828 IKHGTRFSSTKMNRQIIVGVVVIAKNPCLHPGDVRILEAVDVPDLHQLVDCLVFPQKGDR 887
Query: 2670 PHSDEASGSDLDGDLYFVTWDENLIPPSRRSWMPMAYTPAQPKLEPRRIVHQDIIDFFVK 2849
PH++EASGSDLDGDLYFVTWD++LIPP +RSW+PM Y A+ K PR + QDIIDFF+K
Sbjct: 888 PHANEASGSDLDGDLYFVTWDDDLIPPGKRSWVPMDYAAAEAKKLPRTVSPQDIIDFFLK 947
Query: 2850 NISNENLGVICNAHVVHADLSDYGAMDDNCLKLAELAATAVDFPKTGKMVHMPASLKPKL 3029
N+ NENLGVICNAHVVHADLS+YGAMD+ CL+LAELA+TAVDFPKTG V MP +L+PKL
Sbjct: 948 NMVNENLGVICNAHVVHADLSEYGAMDEKCLQLAELASTAVDFPKTGNFVTMPPNLRPKL 1007
Query: 3030 YPDFMDKYDQHSYKSEKILGRLYRKIKDASDEDNSSELISV----YQDLPFDENLEVHGA 3197
YPDFM K D SYKSEKILG+LYR+I+DAS +D SS + ++D+ +D +L+V GA
Sbjct: 1008 YPDFMGKDDHMSYKSEKILGKLYREIRDASCDDPSSSSSAAQACSWEDVSYDMDLKVPGA 1067
Query: 3198 SEYLVEAWETKCSYDRQLNALLGQFRVDKEGEVVTGHLCSMGKHNSRKQGEIKERLKNAY 3377
S+YL +AW KC+YD QLNALLGQ++V EGEVVTGH+ SM K+NSRKQGE+KERLKNAY
Sbjct: 1068 SDYLFDAWNCKCAYDGQLNALLGQYKVFSEGEVVTGHIWSMPKNNSRKQGELKERLKNAY 1127
Query: 3378 YALNKKYRRAFEDVGTDLLQLTDEEKNVRYEKKASAWYCVTYHPKWVEKSVAMREADGER 3557
AL K++R FE G +L+D+EK+V YE+KASAWY VTYHPKW+ KS M+E +GE
Sbjct: 1128 AALRKEFRNVFETAGPHFDELSDDEKSVWYEQKASAWYQVTYHPKWLRKSCEMQEPEGEM 1187
Query: 3558 VPPRLSFAWIPADYLVRIKIKSRD-GKVGTGKPIDSLASYLYERM 3689
VP RLSFAWI ADYLVRIKI+ +D K+ +P+D LA YL ER+
Sbjct: 1188 VPARLSFAWIAADYLVRIKIRCQDKSKLDQQRPVDVLAVYLSERI 1232
>gb|OAY62820.1| putative RNA-dependent RNA polymerase SHL2 [Ananas comosus]
Length = 1232
Score = 1528 bits (3957), Expect = 0.0
Identities = 745/1125 (66%), Positives = 914/1125 (81%), Gaps = 6/1125 (0%)
Frame = +3
Query: 333 FLQFATPAGAQRVLDAAARCELVLGSKPLIARASSDTSYRINRRRSIDPFTFPDARFEIG 512
F+ FA+P A+R ++AA RC+LVLG +PL A ++++S+R++RRR+ DPF F D R +IG
Sbjct: 111 FVHFASPDAAKRAMNAAGRCDLVLGGRPLRAHCAAESSFRVSRRRTTDPFKFSDVRLDIG 170
Query: 513 SLTSPTHFLAAWKLDPKPESSVNFLIDPFDNSCKLLFTGDVAFTANGTREFEVIRCNFKL 692
SL + F A+W P + +F++DPFD CK+LF + AF GTR+ IRC+FK+
Sbjct: 171 SLLARDDFCASWTC-PSGSGAADFVVDPFDGLCKILFARETAFAFKGTRDAATIRCDFKI 229
Query: 693 EFLLRDVMELKIGADGMQHVLMFQLSLGAAPLVYYRTADDDIHNSVEWNLLDDEDPWIRT 872
EFL RD+ E+++ D ++ QL+ +AP + YRTADDDI+ SV +NLLDDEDPWIRT
Sbjct: 230 EFLARDIAEVRLYTDRASLAMLLQLT--SAPYISYRTADDDIYTSVPFNLLDDEDPWIRT 287
Query: 873 TDFTPSGAIGRCNCYRISMKPRFGPKLKRAMEYMKERRIDGLRPDRPIVFKDEANFG-EI 1049
TDF+P+GA+GR + Y+IS+ PRFG KL+RA++Y+++RRI RP+R +V + E +FG
Sbjct: 288 TDFSPTGAVGRGSSYKISLSPRFGGKLERALDYLRKRRIPDYRPNRQLVVRPEPDFGFSP 347
Query: 1050 ATDPFFCFHYKEGVSFANLFMVNALVHKGIFSQHRVTEEFFGLLNGQSELVNDVALRHIY 1229
ATD FF H+ EGV F LF+VNALVHKGI +QH+++++FFGLL GQ+ +VN+ ALRHI+
Sbjct: 348 ATDHFFSIHHAEGVGFPILFLVNALVHKGIVNQHQLSDQFFGLLRGQNGVVNETALRHIW 407
Query: 1230 AYKKPVFDACRRLKMVQEWLLGFSRLIKIPTASEDNMEVRRLVITPTKAYCLPPEIELAN 1409
+YK+P+FDA RRLK+VQEWLL +L++ ++ EVRRLVITPTKAYC+PP IEL+N
Sbjct: 408 SYKRPIFDAYRRLKLVQEWLLNNPKLLRSSKLADYYAEVRRLVITPTKAYCIPPAIELSN 467
Query: 1410 RVLRRYRDMSDRFLRVTFMDEGMQQLNSNVLNFYVAPIVREISNNSPSQKTAMFRRVKNI 1589
RVLRRY++++DRFLRVTF DEGMQQLN++VLN+YVAPIV+EI++NS QKT +F+RVK+I
Sbjct: 468 RVLRRYKEVADRFLRVTFTDEGMQQLNNSVLNYYVAPIVKEITSNSYQQKTTVFKRVKSI 527
Query: 1590 VNKGFNLCGRKYSFLAFSSNQLRDRSAWFFAEDKHTSVHDITSWMGKFQDKNVAKYAARM 1769
+ GF LCGRKYSFLAFSSNQLRDRSAWFFAED T+V IT WMG+F D+NVAK AAR+
Sbjct: 528 LEDGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDSKTTVAAITKWMGRFSDRNVAKCAARI 587
Query: 1770 GQCFSSTYATVEVPSYEVVPFLPDIKRNTYCFSDGIGKITPDLAMEVAKKLQLTENPPSA 1949
GQCFSSTYATVEVP EV P LPDI+ N Y FSDGIGKITPDLAMEVA+KL+LT+NPPSA
Sbjct: 588 GQCFSSTYATVEVPLREVNPVLPDIEGNRYIFSDGIGKITPDLAMEVAEKLKLTDNPPSA 647
Query: 1950 YQIRYAGYKGVIAVWPGNDDGIRLSLRESMYKFQSEHTMLEVVSWTRFQPGFLNRQIVTL 2129
YQIRYAG KGV+AVWPG++ GIRLSLR SM KF+S HT+LEVVSW+RFQPGFLNRQI+TL
Sbjct: 648 YQIRYAGCKGVVAVWPGDEIGIRLSLRPSMNKFESNHTVLEVVSWSRFQPGFLNRQIITL 707
Query: 2130 LSALEVPDDVFARMQDSMVCKLDQMLVNPDVAFDVLTTSCAEQGNVAAMMLSAGFDPQLE 2309
LS+L VPD VFARMQDSM+CKL++MLV+ DVAF+VLTTSCAEQGN AAMMLSAGF PQ E
Sbjct: 708 LSSLSVPDSVFARMQDSMICKLNEMLVDTDVAFEVLTTSCAEQGNTAAMMLSAGFKPQTE 767
Query: 2310 PHLKAMLSCIRLSQLKDLSSKARIFVPKGRWLMGCFDELGVLEQGQCFIQASSPSLENCF 2489
PHLKAMLSCIR +Q DL K RIFVPKGRWLMGC DEL VLE GQCFIQ SSPSL+NCF
Sbjct: 768 PHLKAMLSCIRSAQFGDLLDKTRIFVPKGRWLMGCLDELAVLEHGQCFIQTSSPSLQNCF 827
Query: 2490 LKHGSKFSGTKENKQVIVGTVALAKNPCLHPGDVRILEAVDVPGLRHLVDCFVFPQKGDR 2669
+KHG++FS TK N+Q+IVG V +AKNPCLHPGDVRILEAVDVP L LVDC VFPQKGDR
Sbjct: 828 IKHGTRFSSTKMNRQIIVGVVVIAKNPCLHPGDVRILEAVDVPDLHQLVDCLVFPQKGDR 887
Query: 2670 PHSDEASGSDLDGDLYFVTWDENLIPPSRRSWMPMAYTPAQPKLEPRRIVHQDIIDFFVK 2849
PH++EASGSDLDGDLYFVTWD +LIPP +RSW+PM Y A+ K PR + QDIIDFF+K
Sbjct: 888 PHANEASGSDLDGDLYFVTWDNDLIPPGKRSWVPMDYAAAEAKKLPRTVSPQDIIDFFLK 947
Query: 2850 NISNENLGVICNAHVVHADLSDYGAMDDNCLKLAELAATAVDFPKTGKMVHMPASLKPKL 3029
N+ NENLGVICNAHVVHADLS+YGAMD+ CL+LAELA+TAVDFPKTG V MP +L+PKL
Sbjct: 948 NMVNENLGVICNAHVVHADLSEYGAMDEKCLQLAELASTAVDFPKTGNFVTMPPNLRPKL 1007
Query: 3030 YPDFMDKYDQHSYKSEKILGRLYRKIKDASDEDNSSELISV----YQDLPFDENLEVHGA 3197
YPDFM K D SYKSEKILG+LYR+I+DAS +D SS + ++D+ +D +LEV GA
Sbjct: 1008 YPDFMGKDDHMSYKSEKILGKLYREIRDASCDDPSSSSSAAQACSWEDVSYDMDLEVPGA 1067
Query: 3198 SEYLVEAWETKCSYDRQLNALLGQFRVDKEGEVVTGHLCSMGKHNSRKQGEIKERLKNAY 3377
S+YL +AW KC+YD QLNALLGQ++V EGEVVTGH+ SM K+NSRKQGE+KERLKNAY
Sbjct: 1068 SDYLFDAWNCKCAYDGQLNALLGQYKVFSEGEVVTGHIWSMPKNNSRKQGELKERLKNAY 1127
Query: 3378 YALNKKYRRAFEDVGTDLLQLTDEEKNVRYEKKASAWYCVTYHPKWVEKSVAMREADGER 3557
AL K++R FE G +L+D+EK+V YE+KASAWY VTYHPKW+ KS M+E +GE
Sbjct: 1128 AALRKEFRNVFETAGPHFDELSDDEKSVWYEQKASAWYQVTYHPKWLRKSCEMQEPEGEM 1187
Query: 3558 VPPRLSFAWIPADYLVRIKIKSRD-GKVGTGKPIDSLASYLYERM 3689
VP RLSFAWI ADYLVRIKI+ +D K+ +P+D LA YL ER+
Sbjct: 1188 VPARLSFAWIAADYLVRIKIRCQDKSKLDQQRPVDVLAVYLSERI 1232
>ref|XP_018678117.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-dependent RNA polymerase
SHL2 [Musa acuminata subsp. malaccensis]
Length = 1199
Score = 1518 bits (3929), Expect = 0.0
Identities = 742/1121 (66%), Positives = 913/1121 (81%), Gaps = 2/1121 (0%)
Frame = +3
Query: 333 FLQFATPAGAQRVLDAAARCELVLGSKPLIARASSDTSYRINRRRSIDPFTFPDARFEIG 512
F+ FA P ++ +DAA +C+LVL +PL A +++S+R+NRRR+ DPF F +A EIG
Sbjct: 84 FVHFARPDAVKKAMDAAGKCDLVLNGRPLRANVGTESSFRVNRRRTTDPFRFSNACVEIG 143
Query: 513 SLTSPTHFLAAWKLDPKPESSVNFLIDPFDNSCKLLFTGDVAFTANGTREFEVIRCNFKL 692
+L S FL +WK P+S+V+F+IDPFD+ CK+LF+ + AF G RE +I C+FK+
Sbjct: 144 NLVSRDEFLVSWK---GPDSAVDFVIDPFDDCCKILFSKETAFYFKGLREMTLIMCDFKV 200
Query: 693 EFLLRDVMELKIGADGMQHVLMFQLSLGAAPLVYYRTADDDIHNSVEWNLLDDEDPWIRT 872
EFLLRD+ E+++ D V+ FQL +AP VYYRTADDDI+ SV +NLLDDEDPWIRT
Sbjct: 201 EFLLRDINEVRVHKDAAPFVMQFQLI--SAPYVYYRTADDDIYTSVPFNLLDDEDPWIRT 258
Query: 873 TDFTPSGAIGRCNCYRISMKPRFGPKLKRAMEYMKERRIDGLRPDRPIVFKDEANFGEIA 1052
TD TPSGAIGRCN YRIS+ PRFGPK++R++ Y++E + RP +V +DE +G
Sbjct: 259 TDITPSGAIGRCNSYRISLSPRFGPKMERSLAYLREHGVAENRPRCRLVVRDEPGYGAHM 318
Query: 1053 TDPFFCFHYKEGVSFANLFMVNALVHKGIFSQHRVTEEFFGLLNGQSELVNDVALRHIYA 1232
+DPFFC K+G++FA +F+VNALVH+GI +QH+++EEFF LL QSE+VN AL HI +
Sbjct: 319 SDPFFCIQNKKGINFATMFLVNALVHRGIVNQHQLSEEFFSLLRCQSEMVNGTALMHILS 378
Query: 1233 YKKPVFDACRRLKMVQEWLLGFSRLIKIPTASEDNMEVRRLVITPTKAYCLPPEIELANR 1412
YK P+FDA RLK+VQEWLL +L++ S+D +EVR+LVITPTKAYCLPPE+EL+NR
Sbjct: 379 YKHPIFDAPGRLKLVQEWLLRNPKLLRHSKFSDDIIEVRKLVITPTKAYCLPPEVELSNR 438
Query: 1413 VLRRYRDMSDRFLRVTFMDEGMQQLNSNVLNFYVAPIVREISNNSPSQKTAMFRRVKNIV 1592
VLR+Y++++DRFLRVTF DEGMQQLNSNVLN+YVAPIVR+I++NS QKT +F+RVK+I+
Sbjct: 439 VLRKYKEVADRFLRVTFTDEGMQQLNSNVLNYYVAPIVRDITSNSFPQKTTVFKRVKDIL 498
Query: 1593 NKGFNLCGRKYSFLAFSSNQLRDRSAWFFAEDKHT-SVHDITSWMGKFQDKNVAKYAARM 1769
GF+L G+KYSFLAFSSNQLRDRSAWFFAE + +V I +WMGKF +KNVAK AARM
Sbjct: 499 TNGFHLYGQKYSFLAFSSNQLRDRSAWFFAEVSGSITVATIRNWMGKFSNKNVAKCAARM 558
Query: 1770 GQCFSSTYATVEVPSYEVVPFLPDIKRNTYCFSDGIGKITPDLAMEVAKKLQLTENPPSA 1949
GQCFSSTYATV V EV L DIKRN Y FSDGIGKITP+LA+EVA+KL LTE+PPSA
Sbjct: 559 GQCFSSTYATVNVTPNEVNSELEDIKRNGYVFSDGIGKITPELALEVAQKLHLTEDPPSA 618
Query: 1950 YQIRYAGYKGVIAVWPGNDDGIRLSLRESMYKFQSEHTMLEVVSWTRFQPGFLNRQIVTL 2129
YQIRYAG KGV+AVWPGNDDGI+LSLR SM KF+S HT+LEVVSWTRFQPGFLNRQIVTL
Sbjct: 619 YQIRYAGCKGVVAVWPGNDDGIKLSLRPSMNKFESNHTILEVVSWTRFQPGFLNRQIVTL 678
Query: 2130 LSALEVPDDVFARMQDSMVCKLDQMLVNPDVAFDVLTTSCAEQGNVAAMMLSAGFDPQLE 2309
LS+L+VPD VF RMQD+M+ KL+Q+L + +VAF++LTTSCAEQGN AAMMLSAGF PQ E
Sbjct: 679 LSSLKVPDSVFERMQDTMILKLNQILHDTNVAFEILTTSCAEQGNTAAMMLSAGFRPQSE 738
Query: 2310 PHLKAMLSCIRLSQLKDLSSKARIFVPKGRWLMGCFDELGVLEQGQCFIQASSPSLENCF 2489
PHLKAMLSCIR +QL DL +K +IFVPKGR LMGC DELGVLE GQCFIQAS+PSLENC
Sbjct: 739 PHLKAMLSCIRSTQLGDLLAKTKIFVPKGRLLMGCLDELGVLEHGQCFIQASTPSLENCL 798
Query: 2490 LKHGSKFSGTKENKQVIVGTVALAKNPCLHPGDVRILEAVDVPGLRHLVDCFVFPQKGDR 2669
KHGS+FS ++ N+QVIVGTVA+ KNPCLHPGD+RILEAVDVP L HLVDC +FPQ+GDR
Sbjct: 799 SKHGSRFSASQNNRQVIVGTVAVGKNPCLHPGDIRILEAVDVPELHHLVDCLIFPQRGDR 858
Query: 2670 PHSDEASGSDLDGDLYFVTWDENLIPPSRRSWMPMAYTPAQPKLEPRRIVHQDIIDFFVK 2849
PH++EASGSDLDGDLYFVTWDENL+PP ++SW+PM YTPA+ K PR+I+ QDIIDF++K
Sbjct: 859 PHTNEASGSDLDGDLYFVTWDENLLPPGKKSWVPMDYTPAEVKQFPRQILPQDIIDFYLK 918
Query: 2850 NISNENLGVICNAHVVHADLSDYGAMDDNCLKLAELAATAVDFPKTGKMVHMPASLKPKL 3029
N+ NEN GVICNAHVVHAD S++GA+D+NCLKLAELAATAVDFPKTGK+V MP +LKPK
Sbjct: 919 NMVNENHGVICNAHVVHADRSEHGALDENCLKLAELAATAVDFPKTGKIVTMPPALKPKT 978
Query: 3030 YPDFMDKYDQHSYKSEKILGRLYRKIKDASDEDNSSELISVYQDLPFDENLEVHGASEYL 3209
YPDFM K D+ SYKSEKILG+LYRKIKDA+D++ SEL ++DLP+D +LE+ G+ +YL
Sbjct: 979 YPDFMGKVDRLSYKSEKILGKLYRKIKDATDDELPSELPCTFEDLPYDTDLEIIGSLDYL 1038
Query: 3210 VEAWETKCSYDRQLNALLGQFRVDKEGEVVTGHLCSMGKHNSRKQGEIKERLKNAYYALN 3389
+AW+ K YDR LNALL Q+RV EGEVVTGH+ S+ K+NSRKQGE+KERLKNAY +L
Sbjct: 1039 ADAWQNKVVYDRHLNALLAQYRVSSEGEVVTGHIWSLPKYNSRKQGELKERLKNAYSSLR 1098
Query: 3390 KKYRRAFEDVGTDLLQLTDEEKNVRYEKKASAWYCVTYHPKWVEKSVAMREADGERVPPR 3569
K++R F+ + DLLQLTD+EK YE KASAWY VTYHP+WV+K ++E DG+ VP R
Sbjct: 1099 KQFRHIFKTMSPDLLQLTDDEKCFFYEMKASAWYQVTYHPRWVKKYNELKEPDGDGVPAR 1158
Query: 3570 LSFAWIPADYLVRIKIKSRD-GKVGTGKPIDSLASYLYERM 3689
LSFAWI ADYLVRIK++ ++ G KPIDS ASYL R+
Sbjct: 1159 LSFAWIAADYLVRIKVRCQERGTPDNQKPIDSFASYLSGRV 1199
>gb|OVA07789.1| RNA recognition motif domain [Macleaya cordata]
Length = 1200
Score = 1469 bits (3804), Expect = 0.0
Identities = 724/1124 (64%), Positives = 894/1124 (79%), Gaps = 5/1124 (0%)
Frame = +3
Query: 333 FLQFATPAGAQRVLDAAARCELVLGSKPLIARASSDTSYRIN-RRRSIDPFTFPDARFEI 509
F+ FA+P A R+L+AA R +L+L L ++S+ IN RRRS +PF F + R EI
Sbjct: 83 FVHFASPDSATRILNAAGRGKLILNGNLLKVNLGPESSFHINQRRRSKNPFKFSNVRVEI 142
Query: 510 GSLTSPTHFLAAWKLDPKPESSVNFLIDPFDNSCKLLFTGDVAFTANGTREFEVIRCNFK 689
G+L S F WK P S V+F+IDPFD+SCK+LFT + AF+ T V++C+FK
Sbjct: 143 GTLVSRDEFFIGWK---GPLSGVDFVIDPFDSSCKILFTKETAFSIKDTTNHAVMKCDFK 199
Query: 690 LEFLLRDVMELKIGADGMQHVLMFQLSLGAAPLVYYRTADDDIHNSVEWNLLDDEDPWIR 869
+E +R+++E+K D +++ QL+ ++P ++YRTADDDIH SV ++LLDDEDPWIR
Sbjct: 200 VELFVREIIEVKKYKDTSSLIMVLQLA--SSPFLFYRTADDDIHVSVPFDLLDDEDPWIR 257
Query: 870 TTDFTPSGAIGRCNCYRISMKPRFGPKLKRAMEYMKERRIDGLRPDRPIVFKDEANFGEI 1049
TTDFTP G IGRCNCYRIS+ PRFG K +AM Y+KE RI P + + ++E +FG
Sbjct: 258 TTDFTPGGVIGRCNCYRISVSPRFGSKFDKAMSYLKEWRIPNDCPRQQLRVREEPDFGMP 317
Query: 1050 ATDPFFCFHYKEGVSFANLFMVNALVHKGIFSQHRVTEEFFGLLNGQSELVNDVALRHIY 1229
++D FFC +KEG+SF LFMVNA+VHKGIF+ H++++ FF LL Q++ VN AL HI
Sbjct: 318 SSDSFFCIQFKEGISFELLFMVNAVVHKGIFNIHQLSDRFFELLRSQTKEVNVAALAHIC 377
Query: 1230 AYKKPVFDACRRLKMVQEWLLGFSRLIKIPTASEDNMEVRRLVITPTKAYCLPPEIELAN 1409
+Y++PVFDA +RLK+VQEWLL LIK +DN+EVRRLVITPTKAYCLPP +EL+N
Sbjct: 378 SYRRPVFDASKRLKLVQEWLLRNPELIKSCKGHDDNVEVRRLVITPTKAYCLPPAVELSN 437
Query: 1410 RVLRRYRDMSDRFLRVTFMDEGMQQLNSNVLNFYVAPIVREISNNSPSQKTAMFRRVKNI 1589
RVLR+Y++++DRFLRVTFMDEG+QQLN NVL++YVAPIV++I+NNS QKTA++RRVK I
Sbjct: 438 RVLRQYKEVADRFLRVTFMDEGLQQLNYNVLSYYVAPIVKDITNNSFPQKTAVYRRVKTI 497
Query: 1590 VNKGFNLCGRKYSFLAFSSNQLRDRSAWFFAEDKHTSVHDITSWMGKFQDKNVAKYAARM 1769
GF LCGRKYSFLAFSSNQLRD+SAWFFAE + V +I SWMGKF D+NVAK AARM
Sbjct: 498 AKDGFYLCGRKYSFLAFSSNQLRDQSAWFFAEGEKIKVSNIKSWMGKFNDRNVAKCAARM 557
Query: 1770 GQCFSSTYATVEVPSYEVVPFLPDIKRNTYCFSDGIGKITPDLAMEVAKKLQLTENPPSA 1949
GQCFSSTYATVEVP+ ++ P LPDI+RN Y FSDGIG +TPDLA EVA+KLQL NPP A
Sbjct: 558 GQCFSSTYATVEVPTNQINPGLPDIERNGYVFSDGIGMLTPDLAKEVAEKLQLGANPPCA 617
Query: 1950 YQIRYAGYKGVIAVWPGNDDGIRLSLRESMYKFQSEHTMLEVVSWTRFQPGFLNRQIVTL 2129
YQIR+AG KGVIA W G DDGIRLSLR SM KFQS H++LE+VSWTRFQPGFLNRQI+TL
Sbjct: 618 YQIRFAGCKGVIACWEGKDDGIRLSLRPSMIKFQSTHSILEIVSWTRFQPGFLNRQIITL 677
Query: 2130 LSALEVPDDVFARMQDSMVCKLDQMLVNPDVAFDVLTTSCAEQGNVAAMMLSAGFDPQLE 2309
LS+L VPDDVF++MQDSMVCKLDQ+L N DVAF+VLT+SCAEQGN AAMMLSAGF PQ E
Sbjct: 678 LSSLGVPDDVFSKMQDSMVCKLDQILENTDVAFEVLTSSCAEQGNTAAMMLSAGFKPQTE 737
Query: 2310 PHLKAMLSCIRLSQLKDLSSKARIFVPKGRWLMGCFDELGVLEQGQCFIQASSPSLENCF 2489
PHL+ ML IR +QL+DL +KARIFVP GRWLMGC DELGVLE GQCFIQ+S+PSLENCF
Sbjct: 738 PHLRGMLISIRAAQLRDLLAKARIFVPSGRWLMGCLDELGVLENGQCFIQSSTPSLENCF 797
Query: 2490 LKHGSKFSGTKENKQVIVGTVALAKNPCLHPGDVRILEAVDVPGLRHLVDCFVFPQKGDR 2669
+HG FS TK N QVI GTV +AKNPCLHPGD+RILEAVD PGL HLVDC VFPQKG+R
Sbjct: 798 SRHGIGFSETKRNLQVIKGTVVIAKNPCLHPGDIRILEAVDAPGLHHLVDCLVFPQKGER 857
Query: 2670 PHSDEASGSDLDGDLYFVTWDENLIPPSRRSWMPMAYTPAQPKLEPRRIVHQDIIDFFVK 2849
PH++EASGSDLDGDLYF+TWDE+LIPPS+RSW+PM YTPA K PR + H DI++FF K
Sbjct: 858 PHTNEASGSDLDGDLYFLTWDESLIPPSKRSWIPMDYTPADVKKLPRSVTHADIVEFFTK 917
Query: 2850 NISNENLGVICNAHVVHADLSDYGAMDDNCLKLAELAATAVDFPKTGKMVHMPASLKPKL 3029
+ NE LG ICNAHVVHAD S+YGAMD+ C++LAELAATAVDFPKTGK+V MP SLKPK+
Sbjct: 918 YLVNEKLGAICNAHVVHADQSEYGAMDEKCIQLAELAATAVDFPKTGKLVTMPQSLKPKV 977
Query: 3030 YPDFMDKYDQHSYKSEKILGRLYRKIKDASDEDNS-SELISVYQDLPFDENLEVHGASEY 3206
YPDFM K D SYKS KILG+LYRKIKDASDE S SE + +D+P+D +LE+ G++++
Sbjct: 978 YPDFMGKDDFQSYKSNKILGKLYRKIKDASDEATSTSEPLCAPEDIPYDTDLEIPGSADF 1037
Query: 3207 LVEAWETKCSYDRQLNALLGQFRVDKEGEVVTGHLCSMGKHNSRKQGEIKERLKNAYYAL 3386
++++W KC+YD ++ ALLGQF+V+ E EVVTGH+ SM +NSRKQGE+KE+LK+AY+AL
Sbjct: 1038 IIDSWNHKCAYDEKVIALLGQFKVNTEEEVVTGHVWSMPNYNSRKQGELKEKLKHAYHAL 1097
Query: 3387 NKKYRRAFEDVGTDLLQLTDEEKNVRYEKKASAWYCVTYHPKWVEKSVAMREADG-ERVP 3563
K+++ FE +G D LT EKN YE+KASAWY VTYHP+WV+KS+ +R+ DG +RV
Sbjct: 1098 KKEFKHIFEYLGEDSQNLTVGEKNSVYEQKASAWYQVTYHPRWVKKSLELRDPDGDDRVT 1157
Query: 3564 PRLSFAWIPADYLVRIKIKSRDG--KVGTGKPIDSLASYLYERM 3689
P LSFAW+PA+YLVRIKI+ R G + KPI+SLASYL +R+
Sbjct: 1158 PMLSFAWVPAEYLVRIKIR-RQGIRNLDISKPINSLASYLIDRI 1200
Score = 70.1 bits (170), Expect = 4e-08
Identities = 39/70 (55%), Positives = 48/70 (68%)
Frame = +1
Query: 70 MGSLGSSNASHKDNIITQVSVAGFDAANTTAQSLAQSLEHNLHCVIWRCRLKSSSTPPDS 249
MGSLGS K+ IITQVS+ GFD + TA L LE+ + +IWRCRLK+S TPPDS
Sbjct: 1 MGSLGSEK-DKKEMIITQVSLGGFDK-HVTATELTDFLENEIG-LIWRCRLKNSRTPPDS 57
Query: 250 YPDFDISEDM 279
YP+FD+ M
Sbjct: 58 YPNFDVMNIM 67
>ref|XP_015885879.1| PREDICTED: RNA-dependent RNA polymerase 6 [Ziziphus jujuba]
ref|XP_015885880.1| PREDICTED: RNA-dependent RNA polymerase 6 [Ziziphus jujuba]
ref|XP_015885881.1| PREDICTED: RNA-dependent RNA polymerase 6 [Ziziphus jujuba]
ref|XP_015885882.1| PREDICTED: RNA-dependent RNA polymerase 6 [Ziziphus jujuba]
ref|XP_015885883.1| PREDICTED: RNA-dependent RNA polymerase 6 [Ziziphus jujuba]
Length = 1197
Score = 1449 bits (3750), Expect = 0.0
Identities = 716/1126 (63%), Positives = 885/1126 (78%), Gaps = 7/1126 (0%)
Frame = +3
Query: 333 FLQFATPAGAQRVLDAAARCELVLGSKPLIARASSDTSYRIN-RRRSIDPFTFPDARFEI 509
F+ FA A+ +LDAA RCEL+L +PL + YR+N RRR+ P D +I
Sbjct: 79 FVHFALAESAKWILDAAGRCELILNDRPLKVSLGPENPYRLNQRRRTTTPIKLSDVVVDI 138
Query: 510 GSLTSPTHFLAAWKLDPKPESSVNFLIDPFDNSCKLLFTGDVAFTANGTREFEVIRCNFK 689
G+L + F AW+ P V+FL+DPFD +CK FT D AF+ G+ VI+C+FK
Sbjct: 139 GTLVTRDQFFIAWR---GPPYGVDFLVDPFDGTCKFCFTRDTAFSFKGSLNHAVIKCDFK 195
Query: 690 LEFLLRDVMELKIGADGMQHVLMFQLSLGAAPLVYYRTADDDIHNSVEWNLLDDEDPWIR 869
+EFL+RD+ E K D VL+ QL+ +AP ++YRTADDDI +SV +++LDD+DPWIR
Sbjct: 196 MEFLVRDINEFKQYTDTSYLVLLLQLN--SAPRIWYRTADDDIDDSVPYDMLDDDDPWIR 253
Query: 870 TTDFTPSGAIGRCNCYRISMKPRFGPKLKRAMEYMKERRI--DGLRPDRPIVFKDEANFG 1043
TTDFTPSGAIGR N YRIS+ PR G KLK+A+ Y++ERR+ D LR P+ + E +F
Sbjct: 254 TTDFTPSGAIGRSNSYRISVPPRHGAKLKKAISYLRERRVHHDSLR--WPLRIQKEPDFD 311
Query: 1044 EIATDPFFCFHYKEGVSFANLFMVNALVHKGIFSQHRVTEEFFGLLNGQSELVNDVALRH 1223
+DPFFC HYKE + F +F+VNA++HKGIF+QH++++ FF LL Q + VN AL+H
Sbjct: 312 MPMSDPFFCIHYKEDIDFETMFLVNAVIHKGIFNQHQISDGFFNLLRNQMKEVNVAALKH 371
Query: 1224 IYAYKKPVFDACRRLKMVQEWLLGFSRLIKIPTASEDNMEVRRLVITPTKAYCLPPEIEL 1403
I +YK+PVFDACRRLK+VQEWLL +L K P +D EVRRLVITPT+AYCLPPE+EL
Sbjct: 372 ISSYKRPVFDACRRLKVVQEWLLRDPKLFKKPKRLDDIAEVRRLVITPTRAYCLPPEVEL 431
Query: 1404 ANRVLRRYRDMSDRFLRVTFMDEGMQQLNSNVLNFYVAPIVREISNNSPSQKTAMFRRVK 1583
+NRVLR Y++++DRFLRVTFMDEGMQ +NSNVL ++VA IVREI++NS QKT +F+R+K
Sbjct: 432 SNRVLRNYKEVADRFLRVTFMDEGMQTINSNVLTYHVASIVREITSNSFPQKTKVFQRIK 491
Query: 1584 NIVNKGFNLCGRKYSFLAFSSNQLRDRSAWFFAEDKHTSVHDITSWMGKFQDKNVAKYAA 1763
+I+ GF LCGRKYSFLAFSSNQLRDRSAWFFAEDK+ +V ++ SWMG+F ++NVAK AA
Sbjct: 492 SILTNGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKNINVFEVKSWMGRFTNRNVAKCAA 551
Query: 1764 RMGQCFSSTYATVEVPSYEVVPFLPDIKRNTYCFSDGIGKITPDLAMEVAKKLQLTENPP 1943
RMG CFSSTYA+VEVPS +V PDIKRN Y FSDGIGKITPDLA+EVA+KL+L NPP
Sbjct: 552 RMGLCFSSTYASVEVPSTQVNRGFPDIKRNGYTFSDGIGKITPDLALEVAQKLKLERNPP 611
Query: 1944 SAYQIRYAGYKGVIAVW-PGNDDGIRLSLRESMYKFQSEHTMLEVVSWTRFQPGFLNRQI 2120
AYQIRYAG+KGV+A W P +DDG RLSLR SM KFQS HT+LE+ SWTRFQPGFLNRQI
Sbjct: 612 CAYQIRYAGFKGVVACWKPTDDDGARLSLRPSMDKFQSNHTILEICSWTRFQPGFLNRQI 671
Query: 2121 VTLLSALEVPDDVFARMQDSMVCKLDQMLVNPDVAFDVLTTSCAEQGNVAAMMLSAGFDP 2300
VTLLSAL V D++F MQ++M+ KL+QML++ D+AFDVLT SCAEQGNVAA+MLSAGF P
Sbjct: 672 VTLLSALNVSDEIFWNMQETMIFKLNQMLIDTDIAFDVLTASCAEQGNVAAIMLSAGFSP 731
Query: 2301 QLEPHLKAMLSCIRLSQLKDLSSKARIFVPKGRWLMGCFDELGVLEQGQCFIQASSPSLE 2480
Q EPHL+ ML+CIR +QL L KARIFVP GRWLMGC DELGVLEQGQCFIQ S+PSLE
Sbjct: 732 QKEPHLRGMLTCIRAAQLWGLREKARIFVPSGRWLMGCLDELGVLEQGQCFIQVSNPSLE 791
Query: 2481 NCFLKHGSKFSGTKENKQVIVGTVALAKNPCLHPGDVRILEAVDVPGLRHLVDCFVFPQK 2660
NCF KHGS+F+ +N +VI G V +AKNPCLHPGDVRILEAVDVP L HL DC VFPQK
Sbjct: 792 NCFSKHGSRFNERNDNLEVIKGFVVIAKNPCLHPGDVRILEAVDVPDLHHLYDCLVFPQK 851
Query: 2661 GDRPHSDEASGSDLDGDLYFVTWDENLIPPSRRSWMPMAYTPAQPKLEPRRIVHQDIIDF 2840
G+RPH++EASGSDLDGDLYFVTWDENLIPPS++SW+PM Y A+ K R + +DII+F
Sbjct: 852 GERPHTNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMQYDAAETKQLTRPVTQEDIIEF 911
Query: 2841 FVKNISNENLGVICNAHVVHADLSDYGAMDDNCLKLAELAATAVDFPKTGKMVHMPASLK 3020
F KN+ NENLG ICNAHVVHADLS++GA+D+ CLKLA+LAATAVDFPKTGK+V MP +LK
Sbjct: 912 FSKNMVNENLGTICNAHVVHADLSEHGALDEKCLKLADLAATAVDFPKTGKIVTMPFNLK 971
Query: 3021 PKLYPDFMDKYDQHSYKSEKILGRLYRKIKDASDED--NSSELISVYQDLPFDENLEVHG 3194
PKLYPDFM K + SYKS KILG+LYRKIKDA DED SSE+ + D+P+D +LEV G
Sbjct: 972 PKLYPDFMGKDEYQSYKSNKILGKLYRKIKDAYDEDVTASSEINFLPSDIPYDIDLEVSG 1031
Query: 3195 ASEYLVEAWETKCSYDRQLNALLGQFRVDKEGEVVTGHLCSMGKHNSRKQGEIKERLKNA 3374
AS+++V+AWE KCSYD QLN LLGQ++V++E EVVTGH+ SM K++SRKQGE+KERLK++
Sbjct: 1032 ASDFIVDAWEQKCSYDGQLNGLLGQYKVNREEEVVTGHIWSMPKYSSRKQGELKERLKHS 1091
Query: 3375 YYALNKKYRRAFEDVGTDLLQLTDEEKNVRYEKKASAWYCVTYHPKWVEKSVAMREADGE 3554
Y AL K++R+ FE + +L+D+EKN+ YE+KASAWY VTYHP+WV+KS+ ++E DG
Sbjct: 1092 YSALKKEFRQIFEKMEEKFEELSDDEKNIIYEQKASAWYQVTYHPEWVKKSLDLQEPDGS 1151
Query: 3555 RVPPRLSFAWIPADYLVRIKIKSRD-GKVGTGKPIDSLASYLYERM 3689
R LSFAWI ADYL RIKI+ R G V KPI++L YL +RM
Sbjct: 1152 RYAVMLSFAWIAADYLTRIKIRCRGVGNVDCDKPINALGKYLSDRM 1197
>ref|XP_010254390.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Nelumbo nucifera]
ref|XP_010254391.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Nelumbo nucifera]
ref|XP_010254392.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Nelumbo nucifera]
ref|XP_010254393.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Nelumbo nucifera]
Length = 1193
Score = 1441 bits (3731), Expect = 0.0
Identities = 708/1122 (63%), Positives = 879/1122 (78%), Gaps = 3/1122 (0%)
Frame = +3
Query: 333 FLQFATPAGAQRVLDAAARCELVLGSKPLIARASSDTSYRIN-RRRSIDPFTFPDARFEI 509
F+ F +P A LDAA RC+LVL PL + + +N RRR IDPF PD+ +I
Sbjct: 80 FVHFLSPEAATAALDAAGRCDLVLNRHPLKVNLGPQSPFLLNQRRRKIDPFKIPDSCIKI 139
Query: 510 GSLTSPTHFLAAWKLDPKPESSVNFLIDPFDNSCKLLFTGDVAFTANGTREFEVIRCNFK 689
GSL F+ WK V+F++DPFD +CK+LFT + AF+ T + VI+CNFK
Sbjct: 140 GSLVGQDEFVVCWKAP-----QVDFIVDPFDRTCKILFTKETAFSFKDTMAYVVIKCNFK 194
Query: 690 LEFLLRDVMELKIGADGMQHVLMFQLSLGAAPLVYYRTADDDIHNSVEWNLLDDEDPWIR 869
LEF + D+ +K V++ L L ++P +YYRTADDDI++SV +++LDDEDPWIR
Sbjct: 195 LEFFVSDISYIKQYTGRSSLVIL--LHLRSSPCIYYRTADDDIYDSVPFDMLDDEDPWIR 252
Query: 870 TTDFTPSGAIGRCNCYRISMKPRFGPKLKRAMEYMKERRIDGLRPDRPIVFKDEANFGEI 1049
TTDFTPS IGRCN YRIS+ PRFGP+L + M Y+++ RI P P+ +DE NFG +
Sbjct: 253 TTDFTPSRVIGRCNSYRISISPRFGPRLNKVMNYLRKHRIPDESPRMPLRIRDEPNFGML 312
Query: 1050 ATDPFFCFHYKEGVSFANLFMVNALVHKGIFSQHRVTEEFFGLLNGQSELVNDVALRHIY 1229
++ FFC +KEG+SF +FM+NA++HKGI +QH++++EFF LL QS VN AL++IY
Sbjct: 313 MSEFFFCIDHKEGMSFETIFMLNAVIHKGIINQHQLSDEFFELLRSQSTDVNVTALQNIY 372
Query: 1230 AYKKPVFDACRRLKMVQEWLLGFSRLIKIPTASEDNMEVRRLVITPTKAYCLPPEIELAN 1409
+Y++PV +A LK Q LL +LIKI S+D +E+R+LVITPTKAYCLPPE+EL+N
Sbjct: 373 SYRQPVLNAYTSLKDAQRCLLDNPKLIKISKGSDDFVEMRKLVITPTKAYCLPPEVELSN 432
Query: 1410 RVLRRYRDMSDRFLRVTFMDEGMQQLNSNVLNFYVAPIVREISNNSPSQKTAMFRRVKNI 1589
RVLR+Y+ +++RFLRV+F DE MQQL+SN LN+YVAPIVR+I++N QKT +F RVK I
Sbjct: 433 RVLRKYKHVANRFLRVSFKDERMQQLSSNALNYYVAPIVRDITSNPFPQKTTVFNRVKTI 492
Query: 1590 VNKGFNLCGRKYSFLAFSSNQLRDRSAWFFAEDKHTSVHDITSWMGKFQDKNVAKYAARM 1769
++ GF LCGRKYSFLAFSSNQLRDRSAWFFAEDK+ V ++ WMG+F ++NVAK AARM
Sbjct: 493 LSNGFFLCGRKYSFLAFSSNQLRDRSAWFFAEDKNIKVIEVKKWMGRFTNRNVAKCAARM 552
Query: 1770 GQCFSSTYATVEVPSYEVVPFLPDIKRNTYCFSDGIGKITPDLAMEVAKKLQLTENPPSA 1949
G CFSSTYATVEVP EV LPDI+RN Y FSDGIG +TPDL+MEVA+KLQLT NPP A
Sbjct: 553 GLCFSSTYATVEVPLKEVNLELPDIERNGYVFSDGIGMLTPDLSMEVAEKLQLTANPPCA 612
Query: 1950 YQIRYAGYKGVIAVWPGNDDGIRLSLRESMYKFQSEHTMLEVVSWTRFQPGFLNRQIVTL 2129
YQIRYAG KGVI WPG +DGIRLSLR SM KF+S HT+LEV SWTRFQP +LNRQI+TL
Sbjct: 613 YQIRYAGCKGVIVCWPGKEDGIRLSLRPSMNKFESRHTILEVCSWTRFQPSYLNRQIITL 672
Query: 2130 LSALEVPDDVFARMQDSMVCKLDQMLVNPDVAFDVLTTSCAEQGNVAAMMLSAGFDPQLE 2309
LSAL VPDDVF+RMQDSMV KL+QM+ N DVAFDV+T+SCAEQGN AA+MLSAGF PQ+E
Sbjct: 673 LSALCVPDDVFSRMQDSMVSKLNQMIENTDVAFDVVTSSCAEQGNTAAIMLSAGFKPQME 732
Query: 2310 PHLKAMLSCIRLSQLKDLSSKARIFVPKGRWLMGCFDELGVLEQGQCFIQASSPSLENCF 2489
PHLK MLSCIR +QL+DL K+RIFVP GRWLMGC DEL VLE+GQCFIQ S PSLENCF
Sbjct: 733 PHLKGMLSCIRAAQLRDLLEKSRIFVPSGRWLMGCLDELAVLEEGQCFIQVSKPSLENCF 792
Query: 2490 LKHGSKFSGTKENKQVIVGTVALAKNPCLHPGDVRILEAVDVPGLRHLVDCFVFPQKGDR 2669
KHGS+FS K+N QV+ G VA+AKNPCLHPGD+RILEA+DVP L HL+DC VFPQKGDR
Sbjct: 793 SKHGSRFSEVKKNTQVVKGIVAIAKNPCLHPGDIRILEAIDVPSLHHLIDCLVFPQKGDR 852
Query: 2670 PHSDEASGSDLDGDLYFVTWDENLIPPSRRSWMPMAYTPAQPKLEPRRIVHQDIIDFFVK 2849
PH++EASGSDLDGDLYFVTWDE+LIPPS++S +PM Y+PA+ K PR + H+D+IDFF+K
Sbjct: 853 PHTNEASGSDLDGDLYFVTWDEHLIPPSKQSLVPMDYSPAEVKKLPRDVNHRDLIDFFMK 912
Query: 2850 NISNENLGVICNAHVVHADLSDYGAMDDNCLKLAELAATAVDFPKTGKMVHMPASLKPKL 3029
++ NE LGVICNAHVVHADLS+YGA+D+ C++LAELAATAVDFPKTGK+V +P LKPK
Sbjct: 913 SMVNEKLGVICNAHVVHADLSEYGALDEKCIQLAELAATAVDFPKTGKVVTVPQELKPKR 972
Query: 3030 YPDFMDKYDQHSYKSEKILGRLYRKIKDASDED-NSSELISVYQDLPFDENLEVHGASEY 3206
YPDFM K + SYKS KILG+LYRKIKD SDED SE+ +D+P+D +LEV G+S++
Sbjct: 973 YPDFMGKEEFQSYKSNKILGKLYRKIKDFSDEDVEESEITFAAEDIPYDVHLEVLGSSDH 1032
Query: 3207 LVEAWETKCSYDRQLNALLGQFRVDKEGEVVTGHLCSMGKHNSRKQGEIKERLKNAYYAL 3386
L +AW KC +D QL LLGQ++V++E EVVTGH+ SM K+NS KQGE+KERLKNAY AL
Sbjct: 1033 LADAWNLKCLHDAQLTTLLGQYKVNREEEVVTGHIWSMPKYNSNKQGELKERLKNAYNAL 1092
Query: 3387 NKKYRRAFEDVGTDLLQLTDEEKNVRYEKKASAWYCVTYHPKWVEKSVAMREADGERVPP 3566
K++R+AFE + + LQLTD+EKN YE+KASAWY VTYHP+W+ K++ +RE + E P
Sbjct: 1093 KKEFRQAFEKI-DETLQLTDDEKNTIYEQKASAWYQVTYHPRWIMKTLKLREHEDESNPA 1151
Query: 3567 RLSFAWIPADYLVRIKIKSRD-GKVGTGKPIDSLASYLYERM 3689
LSFAWIPADYLVRIKIK RD V KPI++LA+YL +R+
Sbjct: 1152 MLSFAWIPADYLVRIKIKHRDMENVDARKPINALANYLADRI 1193
Score = 67.8 bits (164), Expect = 2e-07
Identities = 37/68 (54%), Positives = 46/68 (67%)
Frame = +1
Query: 70 MGSLGSSNASHKDNIITQVSVAGFDAANTTAQSLAQSLEHNLHCVIWRCRLKSSSTPPDS 249
MGS G+ N D II+QVS GFD N TA L LE + IWRCRLK+SSTPP+S
Sbjct: 1 MGSEGTKN----DMIISQVSFGGFDN-NVTASELTDFLEKEIG-TIWRCRLKTSSTPPES 54
Query: 250 YPDFDISE 273
YPD+D+++
Sbjct: 55 YPDYDVTD 62
>ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
gb|PNT33711.1| hypothetical protein POPTR_006G253500v3 [Populus trichocarpa]
Length = 1198
Score = 1439 bits (3725), Expect = 0.0
Identities = 708/1124 (62%), Positives = 878/1124 (78%), Gaps = 5/1124 (0%)
Frame = +3
Query: 333 FLQFATPAGAQRVLDAAARCELVLGSKPLIARASSDTSYRIN-RRRSIDPFTFPDARFEI 509
F+ FA P A +DAA RCEL L +K L A + + +N RRR PF EI
Sbjct: 80 FVHFALPQSATCAIDAADRCELFLNNKGLKASLGPENPFTLNQRRRKTTPFKLSGVGVEI 139
Query: 510 GSLTSPTHFLAAWKLDPKPESSVNFLIDPFDNSCKLLFTGDVAFTANGTREFEVIRCNFK 689
G+L S F W+ P + V+FL+DPFD +C+ F+ + AF+ T E VI+C+FK
Sbjct: 140 GTLVSRDEFFVGWR---GPPTGVDFLVDPFDGTCRFCFSRNTAFSFKSTAEHAVIKCDFK 196
Query: 690 LEFLLRDVMELKIGADGMQHVLMFQLSLGAAPLVYYRTADDDIHNSVEWNLLDDEDPWIR 869
+EFL+RD+ E+K + VL+ QL+ +AP V+YRTADDDI SV ++LLDD+DPWIR
Sbjct: 197 VEFLVRDINEIKQYTETSCLVLLLQLA--SAPRVWYRTADDDIEVSVPFDLLDDDDPWIR 254
Query: 870 TTDFTPSGAIGRCNCYRISMKPRFGPKLKRAMEYMKERRIDGLRPDRPIVFKDEANFGEI 1049
TTDFT SGAIGRC+ YR+S+ PR GPKL++A++++KERR+ RPI +DE +FG
Sbjct: 255 TTDFTASGAIGRCHSYRVSIPPRHGPKLRKAVDFLKERRVQEEYLRRPIRIRDEPDFGMP 314
Query: 1050 ATDPFFCFHYKEGVSFANLFMVNALVHKGIFSQHRVTEEFFGLLNGQSELVNDVALRHIY 1229
TDPFFC H+KEG++F LF+VNA++HKGIF+QH+++ +FF LL Q VN AL+HIY
Sbjct: 315 MTDPFFCIHHKEGIAFDVLFLVNAVMHKGIFNQHQLSNDFFDLLRNQPTEVNVAALKHIY 374
Query: 1230 AYKKPVFDACRRLKMVQEWLLGFSRLIKIPTASEDNMEVRRLVITPTKAYCLPPEIELAN 1409
Y++PVFDA ++LK+ QEWLL + K +D E+RRLVITPTKAYCLPPE+EL+N
Sbjct: 375 PYRRPVFDAYKKLKVAQEWLLKNPKFFKNQKKLDDIAEIRRLVITPTKAYCLPPEVELSN 434
Query: 1410 RVLRRYRDMSDRFLRVTFMDEGMQQLNSNVLNFYVAPIVREISNNSPSQKTAMFRRVKNI 1589
RVLR+Y+D++DRFLRVTFMDEG+Q +NSN LN++ APIVR I++ S QKT +F+RV++I
Sbjct: 435 RVLRKYKDVADRFLRVTFMDEGLQTMNSNALNYFAAPIVRAITSYSFPQKTRIFKRVRSI 494
Query: 1590 VNKGFNLCGRKYSFLAFSSNQLRDRSAWFFAEDKHTSVHDITSWMGKFQDKNVAKYAARM 1769
+ +GF LCGR+YSFLAFSSNQLRDRSAWFFAED++ +V I SWMGKF +KN+AK AARM
Sbjct: 495 LTEGFYLCGRRYSFLAFSSNQLRDRSAWFFAEDRNINVMAIKSWMGKFTNKNIAKCAARM 554
Query: 1770 GQCFSSTYATVEVPSYEVVPFLPDIKRNTYCFSDGIGKITPDLAMEVAKKLQLTENPPSA 1949
GQCFSSTYAT+EVP EV LPDIKRN Y FSDGIG ITPDLA EVA+KL+ +PP A
Sbjct: 555 GQCFSSTYATIEVPPEEVNSDLPDIKRNGYDFSDGIGMITPDLAREVAEKLKFDFDPPCA 614
Query: 1950 YQIRYAGYKGVIAVWPGNDDGIRLSLRESMYKFQSEHTMLEVVSWTRFQPGFLNRQIVTL 2129
YQIRYAG KGV+A WP DGIRLSLR SM KFQS HT+LE+ SWTRFQPGFLNRQI+TL
Sbjct: 615 YQIRYAGCKGVVACWPEQGDGIRLSLRSSMNKFQSNHTILEICSWTRFQPGFLNRQIITL 674
Query: 2130 LSALEVPDDVFARMQDSMVCKLDQMLVNPDVAFDVLTTSCAEQGNVAAMMLSAGFDPQLE 2309
LSAL VPD VF +MQ+ MV KL+QMLV+ DVAFDVLT SCAEQGNVAA+MLSAGF PQ E
Sbjct: 675 LSALNVPDAVFWKMQELMVSKLNQMLVDSDVAFDVLTASCAEQGNVAAIMLSAGFKPQKE 734
Query: 2310 PHLKAMLSCIRLSQLKDLSSKARIFVPKGRWLMGCFDELGVLEQGQCFIQASSPSLENCF 2489
PHL+ ML+C+R +QL L KARIFVP GRWLMGC DELGVLEQGQCFIQ S+ LENCF
Sbjct: 735 PHLRGMLTCVRAAQLWGLREKARIFVPSGRWLMGCLDELGVLEQGQCFIQVSNSYLENCF 794
Query: 2490 LKHGSKFSGTKENKQVIVGTVALAKNPCLHPGDVRILEAVDVPGLRHLVDCFVFPQKGDR 2669
+KHGSKFS TK+N QV+ GTV +AKNPCLHPGD+RILEAVD PGL HL DC VFPQKG+R
Sbjct: 795 VKHGSKFSETKKNLQVVKGTVVIAKNPCLHPGDIRILEAVDAPGLHHLYDCLVFPQKGER 854
Query: 2670 PHSDEASGSDLDGDLYFVTWDENLIPPSRRSWMPMAYTPAQPKLEPRRIVHQDIIDFFVK 2849
PH++EASGSDLDGDLYFVTWDENLIPPS+RSW+PM Y A+ K R + HQDI++FF K
Sbjct: 855 PHANEASGSDLDGDLYFVTWDENLIPPSKRSWIPMQYDAAEAKQLTRPVNHQDIVEFFAK 914
Query: 2850 NISNENLGVICNAHVVHADLSDYGAMDDNCLKLAELAATAVDFPKTGKMVHMPASLKPKL 3029
N++NENLG ICNAHVV ADLS+YGA+D+ CL LAELAATAVDFPKTGK+V MP+ LKPK+
Sbjct: 915 NMANENLGAICNAHVVRADLSEYGALDEKCLTLAELAATAVDFPKTGKIVSMPSDLKPKI 974
Query: 3030 YPDFMDKYDQHSYKSEKILGRLYRKIKDASDEDN---SSELISVYQDLPFDENLEVHGAS 3200
YPDFM K + SYKS+KILGRLYR+IKDA D+D+ SSEL V D+P+D +LEV GA+
Sbjct: 975 YPDFMGKEEHQSYKSKKILGRLYRQIKDAYDDDDVAASSELNFVRGDIPYDLDLEVLGAT 1034
Query: 3201 EYLVEAWETKCSYDRQLNALLGQFRVDKEGEVVTGHLCSMGKHNSRKQGEIKERLKNAYY 3380
+++ +AW+ KCSYD QLN LL Q++V +E EVVTGH+ SM K +SRKQG++KERLK++Y
Sbjct: 1035 DFISDAWDRKCSYDGQLNGLLAQYKVKREEEVVTGHVWSMPKGSSRKQGDLKERLKHSYN 1094
Query: 3381 ALNKKYRRAFEDVGTDLLQLTDEEKNVRYEKKASAWYCVTYHPKWVEKSVAMREADGERV 3560
L +++R+ FE + D QL D+EKN+ YE+KASAWY VTYHP W++KS+ ++++DG +
Sbjct: 1095 CLKREFRQVFEKMDLDFGQLDDDEKNMLYERKASAWYQVTYHPHWIQKSLELQDSDGAGI 1154
Query: 3561 PPRLSFAWIPADYLVRIKIK-SRDGKVGTGKPIDSLASYLYERM 3689
LSFAWI ADYL RIKI+ SR G V + KP++SLA YL +RM
Sbjct: 1155 SVMLSFAWIAADYLARIKIRHSRIGNVDSAKPVNSLAKYLADRM 1198
Score = 63.2 bits (152), Expect = 5e-06
Identities = 30/65 (46%), Positives = 47/65 (72%)
Frame = +1
Query: 88 SNASHKDNIITQVSVAGFDAANTTAQSLAQSLEHNLHCVIWRCRLKSSSTPPDSYPDFDI 267
+ S K+ ++TQVS+ GFD + TA+ L + LE + ++WRCRLK+S TPP+SYP+F+I
Sbjct: 3 TEGSAKETVVTQVSLGGFDI-HVTAKDLLEYLEREIG-LVWRCRLKTSWTPPESYPNFEI 60
Query: 268 SEDMK 282
++ K
Sbjct: 61 TDITK 65
>ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
gb|PNS92354.1| hypothetical protein POPTR_018G028100v3 [Populus trichocarpa]
Length = 1200
Score = 1435 bits (3715), Expect = 0.0
Identities = 710/1126 (63%), Positives = 877/1126 (77%), Gaps = 7/1126 (0%)
Frame = +3
Query: 333 FLQFATPAGAQRVLDAAARCELVLGSKPLIARASSDTSYRIN-RRRSIDPFTFPDARFEI 509
F+ FA P A ++A+ RCEL L +K L + +N RRR+ PF D FEI
Sbjct: 80 FVHFALPQSATLAMNASGRCELFLNNKALKVSLGPKNPFTLNQRRRTTTPFKLSDVGFEI 139
Query: 510 GSLTSPTHFLAAWKLDPKPESSVNFLIDPFDNSCKLLFTGDVAFTANGTREFEVIRCNFK 689
G+L S F W+ P S V+FL+DPFD +CK F+ + AF+ T E VI+C+FK
Sbjct: 140 GNLVSRDEFFVGWR---GPPSGVDFLVDPFDGTCKFCFSRNTAFSLKSTSEHAVIKCDFK 196
Query: 690 LEFLLRDVMELKIGADGMQHVLMFQLSLGAAPLVYYRTADDDIHNSVEWNLLDDEDPWIR 869
+EFL+RD+ E+ + VL+ QL+ +AP V+YRTADDDI V ++LLDD+DPWIR
Sbjct: 197 VEFLVRDINEIIQYTETSCLVLLLQLA--SAPWVWYRTADDDIEAWVPFDLLDDDDPWIR 254
Query: 870 TTDFTPSGAIGRCNCYRISMKPRFGPKLKRAMEYMKERRIDGLRPD---RPIVFKDEANF 1040
TTDFT SGAIGRC+ YR+S+ PR G KL++A++Y+KERR+ L+ + R I DE +F
Sbjct: 255 TTDFTASGAIGRCHSYRVSIPPRHGSKLRKAVKYLKERRVQVLQEENHRRRIRILDEPDF 314
Query: 1041 GEIATDPFFCFHYKEGVSFANLFMVNALVHKGIFSQHRVTEEFFGLLNGQSELVNDVALR 1220
G +DPFFC H+KEG++F LF+VNA++HKGIF+QH+++ +FF LL Q VN AL+
Sbjct: 315 GMPMSDPFFCIHHKEGIAFEVLFLVNAVMHKGIFNQHQLSNDFFDLLRNQHTEVNVSALK 374
Query: 1221 HIYAYKKPVFDACRRLKMVQEWLLGFSRLIKIPTASEDNMEVRRLVITPTKAYCLPPEIE 1400
HI Y++PVF+A RRLK VQEWLL L K P D +E+RRLVITPTKAYCLPPE+E
Sbjct: 375 HICTYRRPVFNAYRRLKAVQEWLLKNPNLFKNPKQLGDVVEIRRLVITPTKAYCLPPEVE 434
Query: 1401 LANRVLRRYRDMSDRFLRVTFMDEGMQQLNSNVLNFYVAPIVREISNNSPSQKTAMFRRV 1580
L+NRVLR+Y+D++DRFLRVTFMDEG+Q++NSNVLN+YVAPIVR+I++NS QKT +F+RV
Sbjct: 435 LSNRVLRKYKDVADRFLRVTFMDEGLQRMNSNVLNYYVAPIVRDITSNSFPQKTRIFKRV 494
Query: 1581 KNIVNKGFNLCGRKYSFLAFSSNQLRDRSAWFFAEDKHTSVHDITSWMGKFQDKNVAKYA 1760
++I+ +GF LCGR+YSFLAFS+NQLRD+SAWFF+E+++ SV D+ SWMGKF ++N+AK A
Sbjct: 495 RSILTEGFYLCGRRYSFLAFSANQLRDQSAWFFSEERNISVLDVKSWMGKFTNRNIAKCA 554
Query: 1761 ARMGQCFSSTYATVEVPSYEVVPFLPDIKRNTYCFSDGIGKITPDLAMEVAKKLQLTENP 1940
ARMGQCFSSTYAT+EVP EV LPDI+RN Y FSDGIG ITPDLA EVA+KL+L +P
Sbjct: 555 ARMGQCFSSTYATIEVPPEEVNSDLPDIERNGYVFSDGIGIITPDLAREVAEKLKLDIDP 614
Query: 1941 PSAYQIRYAGYKGVIAVWPGNDDGIRLSLRESMYKFQSEHTMLEVVSWTRFQPGFLNRQI 2120
P AYQIRYAG KGV+A WPG DG+RLSLR SM KFQS HT LE+ SWTRFQPGFLNRQI
Sbjct: 615 PCAYQIRYAGCKGVVACWPGKGDGVRLSLRPSMNKFQSNHTTLEICSWTRFQPGFLNRQI 674
Query: 2121 VTLLSALEVPDDVFARMQDSMVCKLDQMLVNPDVAFDVLTTSCAEQGNVAAMMLSAGFDP 2300
+TLLS L VPD VF +MQ++MV KL+QM VN DVAFDVLT SCA+QGNVAA+MLSAGF P
Sbjct: 675 ITLLSTLNVPDAVFWKMQETMVSKLNQMFVNSDVAFDVLTASCADQGNVAAIMLSAGFKP 734
Query: 2301 QLEPHLKAMLSCIRLSQLKDLSSKARIFVPKGRWLMGCFDELGVLEQGQCFIQASSPSLE 2480
EPHL+ ML+C+R +QL DL K RIFVP GRWLMGC DELG+LEQGQCFIQ S+ SLE
Sbjct: 735 DREPHLRGMLTCVRAAQLWDLREKTRIFVPSGRWLMGCLDELGMLEQGQCFIQVSNSSLE 794
Query: 2481 NCFLKHGSKFSGTKENKQVIVGTVALAKNPCLHPGDVRILEAVDVPGLRHLVDCFVFPQK 2660
CF+KHG+KFS ++N QVI GTV +AKNPCLHPGDVR+LEAVDVPGL HL DC VFPQK
Sbjct: 795 KCFMKHGAKFSEAEKNLQVIKGTVVIAKNPCLHPGDVRVLEAVDVPGLHHLYDCLVFPQK 854
Query: 2661 GDRPHSDEASGSDLDGDLYFVTWDENLIPPSRRSWMPMAYTPAQPKLEPRRIVHQDIIDF 2840
G+RPH++EASGSDLDGDLYFVTWDENLIPPS+RSW+PM Y A+ KL R + HQDII+F
Sbjct: 855 GERPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWIPMQYDAAEAKLLARPVNHQDIIEF 914
Query: 2841 FVKNISNENLGVICNAHVVHADLSDYGAMDDNCLKLAELAATAVDFPKTGKMVHMPASLK 3020
F KN+ N+NLG ICNAHVVHADLS+YGA D NCL LAELAATAVDFPKTGK+V MP LK
Sbjct: 915 FAKNMVNDNLGAICNAHVVHADLSEYGATDKNCLTLAELAATAVDFPKTGKVVSMPPYLK 974
Query: 3021 PKLYPDFMDKYDQHSYKSEKILGRLYRKIKDASDED--NSSELISVYQDLPFDENLEVHG 3194
PK+YPDFM K + SYKSEKILGRLYR+IKDA DED SSEL V D+P+D +LEV G
Sbjct: 975 PKMYPDFMGKEEYQSYKSEKILGRLYRQIKDAYDEDVAASSELNLVPGDIPYDSDLEVVG 1034
Query: 3195 ASEYLVEAWETKCSYDRQLNALLGQFRVDKEGEVVTGHLCSMGKHNSRKQGEIKERLKNA 3374
AS+Y+ +AW+ KCSYD QLN LL Q++V +E EVVTGH+ SM K++SRKQGE+K+RLK++
Sbjct: 1035 ASDYISDAWDQKCSYDGQLNGLLSQYKVKREEEVVTGHIWSMPKYSSRKQGELKDRLKHS 1094
Query: 3375 YYALNKKYRRAFEDVGTDLLQLTDEEKNVRYEKKASAWYCVTYHPKWVEKSVAMREADGE 3554
Y +L K++R+ FE + + QL D EKN YE+KASAWY V YHP WV+KS+ +++ DG
Sbjct: 1095 YNSLKKEFRQIFEKMDLEFEQLEDGEKNKLYEQKASAWYQVVYHPHWVKKSLELQDPDGA 1154
Query: 3555 RVPPRLSFAWIPADYLVRIKIKSRD-GKVGTGKPIDSLASYLYERM 3689
LSFAWI ADYL RIKI+ R+ G V + KP++SLA YL +RM
Sbjct: 1155 GTSVMLSFAWIAADYLARIKIRHRETGNVDSAKPVNSLAKYLADRM 1200
Score = 62.4 bits (150), Expect = 8e-06
Identities = 30/65 (46%), Positives = 47/65 (72%)
Frame = +1
Query: 88 SNASHKDNIITQVSVAGFDAANTTAQSLAQSLEHNLHCVIWRCRLKSSSTPPDSYPDFDI 267
+ S K+ ++TQVSV GFD + TA+ L + L+ + ++WRCRLK+S TPP+SYP+F+I
Sbjct: 3 AEGSAKETVVTQVSVGGFDI-HVTAKDLLEYLDRAIG-LVWRCRLKTSWTPPESYPNFEI 60
Query: 268 SEDMK 282
++ K
Sbjct: 61 TDITK 65
>ref|XP_011039698.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Populus euphratica]
Length = 1195
Score = 1433 bits (3710), Expect = 0.0
Identities = 709/1124 (63%), Positives = 879/1124 (78%), Gaps = 5/1124 (0%)
Frame = +3
Query: 333 FLQFATPAGAQRVLDAAARCELVLGSKPLIARASSDTSYRIN-RRRSIDPFTFPDARFEI 509
F+ FA P A +DAA RCEL L +K L A + + +N RRR PF D EI
Sbjct: 80 FVHFALPESATWAIDAADRCELFLNNKGLKASLGPENPFTLNQRRRKTTPFKLSDVDVEI 139
Query: 510 GSLTSPTHFLAAWKLDPKPESSVNFLIDPFDNSCKLLFTGDVAFTANGTREFEVIRCNFK 689
G+L S F W+ P + V+FL+DPFD +C+ F+ + AF+ T E VI+C+FK
Sbjct: 140 GTLVSRDEFFVGWR---GPPTGVDFLVDPFDGTCRFCFSRNTAFSFKSTAEHAVIKCDFK 196
Query: 690 LEFLLRDVMELKIGADGMQHVLMFQLSLGAAPLVYYRTADDDIHNSVEWNLLDDEDPWIR 869
+EFL+RD+ E+K + VL+ QL+ +AP V+YRTADDDI SV ++LLDD+DPWIR
Sbjct: 197 VEFLVRDINEIKQYKETSCLVLLLQLA--SAPWVWYRTADDDIEVSVPFDLLDDDDPWIR 254
Query: 870 TTDFTPSGAIGRCNCYRISMKPRFGPKLKRAMEYMKERRIDGLRPDRPIVFKDEANFGEI 1049
TTDFT SGAIGRC+ YR+S+ PR GPKL++A++++KERR+ RPI +DE +FG
Sbjct: 255 TTDFTASGAIGRCHSYRVSIPPRHGPKLRKAVDFLKERRVQEEYLRRPIRIRDEPDFGMP 314
Query: 1050 ATDPFFCFHYKEGVSFANLFMVNALVHKGIFSQHRVTEEFFGLLNGQSELVNDVALRHIY 1229
TDPFFC H+KEG++F LF+VNA++HKGIF+QH+++ +FF LL Q VN AL+HIY
Sbjct: 315 MTDPFFCIHHKEGIAFDVLFLVNAVMHKGIFNQHQLSNDFFDLLRNQPTEVNVAALKHIY 374
Query: 1230 AYKKPVFDACRRLKMVQEWLLGFSRLIKIPTASEDNMEVRRLVITPTKAYCLPPEIELAN 1409
Y++PVFDA ++LK+ QEWLL +L K +D E+RRL+ITPTKAYCLPPE+EL+N
Sbjct: 375 PYRRPVFDAYKKLKVTQEWLLKNPKLFKNQKKLDDIAEIRRLIITPTKAYCLPPEVELSN 434
Query: 1410 RVLRRYRDMSDRFLRVTFMDEGMQQLNSNVLNFYVAPIVREISNNSPSQKTAMFRRVKNI 1589
RVLR+Y+D++DRFLRVTFMDEG+Q +NSN LN++ APIVR I++ S QKT +F+RV++I
Sbjct: 435 RVLRKYKDVADRFLRVTFMDEGVQTMNSNALNYFAAPIVRAITSYSFPQKTRIFKRVRSI 494
Query: 1590 VNKGFNLCGRKYSFLAFSSNQLRDRSAWFFAEDKHTSVHDITSWMGKFQDKNVAKYAARM 1769
+ +GF LCGR+YSFLAFSSNQLRDRSAWFFAED++ +V I SWMGKF +KN+AK AARM
Sbjct: 495 LTEGFYLCGRRYSFLAFSSNQLRDRSAWFFAEDRNINVMAIKSWMGKFTNKNIAKCAARM 554
Query: 1770 GQCFSSTYATVEVPSYEVVPFLPDIKRNTYCFSDGIGKITPDLAMEVAKKLQLTENPPSA 1949
GQCFSSTYAT+EVP EV LPDIKRN Y FSDGIG ITPDLA EVA+KL+ +PPSA
Sbjct: 555 GQCFSSTYATIEVPPEEVNSDLPDIKRNGYDFSDGIGMITPDLAREVAEKLKFDFDPPSA 614
Query: 1950 YQIRYAGYKGVIAVWPGNDDGIRLSLRESMYKFQSEHTMLEVVSWTRFQPGFLNRQIVTL 2129
YQIRYAG KGV+A WP DGIRLSLR SM KFQS HT+LE+ SWTRFQPGFLNRQI+TL
Sbjct: 615 YQIRYAGCKGVVACWPEQGDGIRLSLRSSMNKFQSNHTILEICSWTRFQPGFLNRQIITL 674
Query: 2130 LSALEVPDDVFARMQDSMVCKLDQMLVNPDVAFDVLTTSCAEQGNVAAMMLSAGFDPQLE 2309
LSAL VPD VF +MQ+ MV KL+QMLV+ DVAFDVLT SCAE GNVAA+MLSAGF PQ E
Sbjct: 675 LSALNVPDAVFWKMQEIMVSKLNQMLVDSDVAFDVLTASCAELGNVAAIMLSAGFKPQKE 734
Query: 2310 PHLKAMLSCIRLSQLKDLSSKARIFVPKGRWLMGCFDELGVLEQGQCFIQASSPSLENCF 2489
PHL+ ML+C+R +QL L KARIFVP GRWLMGC DEL VLEQGQCFIQ S+ LENCF
Sbjct: 735 PHLRGMLNCVRAAQLWGLREKARIFVPSGRWLMGCLDELAVLEQGQCFIQVSNSYLENCF 794
Query: 2490 LKHGSKFSGTKENKQVIVGTVALAKNPCLHPGDVRILEAVDVPGLRHLVDCFVFPQKGDR 2669
+KHGSKFS TK N QV+ GTV +AKNPCLHPGD+RILEAVD PGL HL DC VFPQKG+R
Sbjct: 795 VKHGSKFSETKRNLQVVKGTVVIAKNPCLHPGDIRILEAVDDPGLHHLYDCLVFPQKGER 854
Query: 2670 PHSDEASGSDLDGDLYFVTWDENLIPPSRRSWMPMAYTPAQPKLEPRRIVHQDIIDFFVK 2849
PH++EASGSDLDGDLYFVTWDENLIPPS+RSW+PM Y A+ K R + HQDII+FF K
Sbjct: 855 PHANEASGSDLDGDLYFVTWDENLIPPSKRSWIPMQYDAAEAKQLTRPVNHQDIIEFFAK 914
Query: 2850 NISNENLGVICNAHVVHADLSDYGAMDDNCLKLAELAATAVDFPKTGKMVHMPASLKPKL 3029
N++NENLG ICNAHVV ADLS+YGA+D+ CL LAELAATAVDFPKTGK+V MP+ LKPK+
Sbjct: 915 NMANENLGAICNAHVVRADLSEYGALDEKCLTLAELAATAVDFPKTGKIVSMPSDLKPKI 974
Query: 3030 YPDFMDKYDQHSYKSEKILGRLYRKIKDASDEDN---SSELISVYQDLPFDENLEVHGAS 3200
YPDFM K + SYKS+KILGRLYR+IKDA D+D+ SS+L V D+P+D +LEV GA+
Sbjct: 975 YPDFMGKEEHQSYKSKKILGRLYRQIKDAYDDDDVAASSDLNFVPGDVPYDLDLEVLGAT 1034
Query: 3201 EYLVEAWETKCSYDRQLNALLGQFRVDKEGEVVTGHLCSMGKHNSRKQGEIKERLKNAYY 3380
+Y+ +AW+ KCSYD QLN LL Q++V +E EVVTGH+ SM K +SR+QG++KERLK++Y
Sbjct: 1035 DYISDAWDRKCSYDGQLNGLLAQYKVKREEEVVTGHVWSMPKGSSRQQGDLKERLKHSYN 1094
Query: 3381 ALNKKYRRAFEDVGTDLLQLTDEEKNVRYEKKASAWYCVTYHPKWVEKSVAMREADGERV 3560
L +++R+ FE + D QL D+EKN+ YE+KASAWY VTYHP+W++KS+ ++++DG +
Sbjct: 1095 CLKREFRQVFEKMDLDFGQLDDDEKNMLYERKASAWYQVTYHPRWIQKSLELQDSDGAAM 1154
Query: 3561 PPRLSFAWIPADYLVRIKIK-SRDGKVGTGKPIDSLASYLYERM 3689
LSFAWI ADYL RIKI+ SR G V + KPI+SLA YL +RM
Sbjct: 1155 ---LSFAWIAADYLARIKIRHSRIGNVDSAKPINSLAKYLADRM 1195
Score = 63.5 bits (153), Expect = 4e-06
Identities = 29/62 (46%), Positives = 46/62 (74%)
Frame = +1
Query: 88 SNASHKDNIITQVSVAGFDAANTTAQSLAQSLEHNLHCVIWRCRLKSSSTPPDSYPDFDI 267
+ S K+ ++TQVS+ GFD + TA+ L + LE + ++WRCRLK+S TPP+SYP+F+I
Sbjct: 3 TEGSAKETVVTQVSIGGFDI-HVTAKDLLEYLEREIG-LVWRCRLKTSWTPPESYPNFEI 60
Query: 268 SE 273
++
Sbjct: 61 AD 62
>gb|APR63701.1| SILENCING DEFECTIVE family protein 1 [Populus tomentosa]
Length = 1199
Score = 1432 bits (3708), Expect = 0.0
Identities = 708/1125 (62%), Positives = 877/1125 (77%), Gaps = 6/1125 (0%)
Frame = +3
Query: 333 FLQFATPAGAQRVLDAAARCELVLGSKPLIARASSDTSYRIN-RRRSIDPFTFPDARFEI 509
F+ FA P A +DAA RCEL L +K L A + + +N RRR PF EI
Sbjct: 80 FVHFALPQSATCAIDAADRCELFLNNKGLKASLGPENPFTLNQRRRKTTPFKLSGVGVEI 139
Query: 510 GSLTSPTHFLAAWKLDPKPESSVNFLIDPFDNSCKLLFTGDVAFTANGTREFEVIRCNFK 689
G+L S F W+ P + V+FL+DPFD +C+ F+ + AF+ T E VI+C+FK
Sbjct: 140 GTLVSRDEFFVGWR---GPPTGVDFLVDPFDGTCRFCFSRNTAFSFKSTAEHAVIKCDFK 196
Query: 690 LEFLLRDVMELKIGADGMQHVLMFQLSLGAAPLVYYRTADDDIHNSVEWNLLDDEDPWIR 869
+EFL+RD+ E+K + VL+ QL+ +AP V+YRTADDDI SV ++LLDD+DPWIR
Sbjct: 197 VEFLVRDINEIKQYTETSCLVLLLQLA--SAPRVWYRTADDDIEVSVPFDLLDDDDPWIR 254
Query: 870 TTDFTPSGAIGRCNCYRISMKPRFGPKLKRAMEYMKERRIDGLRPDRPIVFKDEANFGEI 1049
TTDFT SGAIGRC+ YR+S+ PR GPKL++A++++KERR+ RPI +DE +FG
Sbjct: 255 TTDFTASGAIGRCHSYRVSIPPRHGPKLRKAVDFLKERRVQEEYLRRPIRIRDEPDFGMP 314
Query: 1050 ATDPFFCFHYKEGVSFANLFMVNALVHKGIFSQHRVTEEFFGLLNGQSELVNDVALRHIY 1229
TDPFFC H+KEG++F LF+VNA++HKGIF+QH+++ +FF LL Q VN AL+HIY
Sbjct: 315 MTDPFFCIHHKEGIAFDVLFLVNAVMHKGIFNQHQLSNDFFDLLRNQPTEVNVAALKHIY 374
Query: 1230 AYKKPVFDACRRLKMVQEWLLGFSRLIKIPTASEDNMEVRRLVITPTKAYCLPPEIELAN 1409
Y++PVFDA ++LK+ QEWLL + K +D E+RRLVITPTKAYCLPPE+EL+N
Sbjct: 375 PYRRPVFDAYKKLKVAQEWLLKNPKFFKNQKKLDDIAEIRRLVITPTKAYCLPPEVELSN 434
Query: 1410 RVLRRYRDMSDRFLRVTFMDEGMQQLNSNVLNFYVAPIVREISNNSPSQKTAMFRRVKNI 1589
RVLR+Y+D++DRFLRVTFMDEG+Q +NSN LN++ APIVR I++ S QKT +F+RV++I
Sbjct: 435 RVLRKYKDVADRFLRVTFMDEGLQTMNSNALNYFAAPIVRAITSYSFPQKTRIFKRVRSI 494
Query: 1590 VNKGFNLCGRKYSFLAFSSNQLRDRSAWFFAEDKHTSVHDITSWMGKFQDKNVAKYAARM 1769
+ +GF LCGR+YSFLAFSSNQLRDRSAWFFAED++ +V I SWMGKF +KN+AK AARM
Sbjct: 495 LTEGFYLCGRRYSFLAFSSNQLRDRSAWFFAEDRNINVMAIKSWMGKFTNKNIAKCAARM 554
Query: 1770 GQCFSSTYATVEVPSYEVVPFLPDIKRNTYCFSDGIGKITPDLAMEVAKKLQLTENPPSA 1949
GQCFSSTYAT+EVP EV LPDIKRN Y FSDGIG ITPDLA EVA+KL+ +PP A
Sbjct: 555 GQCFSSTYATIEVPPEEVNSDLPDIKRNGYDFSDGIGMITPDLAREVAEKLKFDFDPPCA 614
Query: 1950 YQIRYAGYKGVIAVWPGNDDGIRLSLRESMYKFQSEHTMLEVVSWTRFQPGFLNRQIVTL 2129
YQIRYAG KGV+A WP DGIRLSLR SM KFQS HT+LE+ SWTRFQPGFLNRQI+TL
Sbjct: 615 YQIRYAGCKGVVACWPEQGDGIRLSLRSSMNKFQSNHTILEICSWTRFQPGFLNRQIITL 674
Query: 2130 LSALEVPDDVFARMQDSMVCKLDQMLVNPDVAFDVLTTSCAEQGNVAAMMLSAGFDPQLE 2309
LSAL VPD VF +MQ+ MV KL+QMLV+ DVAFDVLT SCAEQGNVAA+MLSAGF PQ E
Sbjct: 675 LSALNVPDAVFWKMQELMVSKLNQMLVDSDVAFDVLTASCAEQGNVAAIMLSAGFKPQKE 734
Query: 2310 PHLKAMLSCIRLSQLKDLSSKARIFVPKGRWLMGCFDELGVLEQGQCFIQASSPSLENCF 2489
PHL+ ML+C+R +QL L KARIFVP GRWLMGC DELGVLEQGQCFIQ S+ LENCF
Sbjct: 735 PHLRGMLTCVRAAQLWGLREKARIFVPSGRWLMGCLDELGVLEQGQCFIQVSNSYLENCF 794
Query: 2490 LKHGSKFSGTKENKQVIVGTVALAKNPCLHPGDVRILEAVDVPGLRHLVDCFVFPQKGDR 2669
+KHGSKFS TK+N QV+ GTV +AKNPCLHPGD+RILEAVD PGL HL DC VFPQKG+R
Sbjct: 795 VKHGSKFSETKKNLQVVKGTVVIAKNPCLHPGDIRILEAVDAPGLHHLYDCLVFPQKGER 854
Query: 2670 PHSDEASGSDLDGDLYFVTWDENLIPPSRRSWMPMAYTPAQPKLEPRRIVHQDIIDFFVK 2849
PH++EASGSDLDGDLYFVTWDENLIPPS+RSW+PM Y A+ K R + HQDI++FF K
Sbjct: 855 PHANEASGSDLDGDLYFVTWDENLIPPSKRSWIPMQYDAAEAKQLTRPVNHQDIVEFFAK 914
Query: 2850 NISNENLGVICNAHVVHADLSDYGAMDDNCLKLAELAATAVDFPKTGKMVHMPASLKPKL 3029
N++NENLG ICNAHVV ADLS+YGA+D+ CL LAELAATAVDFPKTGK+V MP+ LKPK+
Sbjct: 915 NMANENLGAICNAHVVRADLSEYGALDEKCLTLAELAATAVDFPKTGKIVSMPSDLKPKI 974
Query: 3030 YPDFMDKYDQHSYKSEKILGRLYRKIKDASDEDN---SSELISV-YQDLPFDENLEVHGA 3197
YPDFM K + SYKS+KILGRLYR+IKDA D+D+ SSE V D+P+D +LEV GA
Sbjct: 975 YPDFMGKEEHQSYKSKKILGRLYRQIKDAYDDDDVAASSERNFVPAADIPYDLDLEVLGA 1034
Query: 3198 SEYLVEAWETKCSYDRQLNALLGQFRVDKEGEVVTGHLCSMGKHNSRKQGEIKERLKNAY 3377
++Y+ +AW+ KCSYD QLN LL Q++V +E EVVTGH+ SM K +SRKQG++KERLK++Y
Sbjct: 1035 TDYISDAWDRKCSYDGQLNGLLAQYKVKREEEVVTGHVWSMPKGSSRKQGDLKERLKHSY 1094
Query: 3378 YALNKKYRRAFEDVGTDLLQLTDEEKNVRYEKKASAWYCVTYHPKWVEKSVAMREADGER 3557
L +++R+ FE + DL QL D+ KN+ YE+KASAWY VTYHP W++KS+ ++++DG
Sbjct: 1095 NCLKREFRQVFEKMDLDLGQLDDDIKNMLYERKASAWYQVTYHPHWIQKSLELQDSDGAG 1154
Query: 3558 VPPRLSFAWIPADYLVRIKIK-SRDGKVGTGKPIDSLASYLYERM 3689
+ LSFAWI ADYL RIKI+ SR G V + KP++SLA YL +RM
Sbjct: 1155 ISVMLSFAWIAADYLARIKIRHSRIGNVDSAKPVNSLAKYLADRM 1199
Score = 63.2 bits (152), Expect = 5e-06
Identities = 30/65 (46%), Positives = 47/65 (72%)
Frame = +1
Query: 88 SNASHKDNIITQVSVAGFDAANTTAQSLAQSLEHNLHCVIWRCRLKSSSTPPDSYPDFDI 267
+ S K+ ++TQVS+ GFD + TA+ L + LE + ++WRCRLK+S TPP+SYP+F+I
Sbjct: 3 TEGSAKETVVTQVSLGGFDI-HVTAKDLLEYLEREIG-LVWRCRLKTSWTPPESYPNFEI 60
Query: 268 SEDMK 282
++ K
Sbjct: 61 TDITK 65
>ref|XP_023881956.1| RNA-dependent RNA polymerase 6 [Quercus suber]
ref|XP_023881957.1| RNA-dependent RNA polymerase 6 [Quercus suber]
ref|XP_023881958.1| RNA-dependent RNA polymerase 6 [Quercus suber]
ref|XP_023881959.1| RNA-dependent RNA polymerase 6 [Quercus suber]
ref|XP_023881960.1| RNA-dependent RNA polymerase 6 [Quercus suber]
gb|POE73687.1| rna-dependent rna polymerase 6 [Quercus suber]
Length = 1200
Score = 1430 bits (3702), Expect = 0.0
Identities = 707/1129 (62%), Positives = 873/1129 (77%), Gaps = 10/1129 (0%)
Frame = +3
Query: 333 FLQFATPAGAQRVLDAAARCELVLGSKPLIARASSDTSYRIN-RRRSIDPFTFPDARFEI 509
F+ FA P A ++AA RCEL L + L A + + +N RRR+ P D EI
Sbjct: 77 FVHFALPESATWAMNAAGRCELSLENNLLKASLGPENPFCLNKRRRATTPIKLSDVLVEI 136
Query: 510 GSLTSPTHFLAAWKLDPKPESSVNFLIDPFDNSCKLLFTGDVAFTANGTREFEVIRCNFK 689
GSL + F AW+ P V FL+DPFD +CK FT D FT T + +++C+FK
Sbjct: 137 GSLVNRDDFFVAWR---GPSRGVEFLVDPFDGTCKFCFTRDTTFTFKDTGKHAMVKCDFK 193
Query: 690 LEFLLRDVMELKIGADGMQHVLMFQLSLGAAPLVYYRTADDDIHNSVEWNLLDDEDPWIR 869
+EFL+RD+ E+K + V++ QLS ++P V+YRTADDDI +V ++LLDD+DPWIR
Sbjct: 194 VEFLVRDINEIKQYREPSYLVILLQLS--SSPWVWYRTADDDIEETVSFDLLDDDDPWIR 251
Query: 870 TTDFTPSGAIGRCNCYRISMKPRFGPKLKRAMEYMKERRIDGLRPDRPIVFKDEANFGEI 1049
TTDFTPSGAIGRCN YR+S+ PR+G KL++A++Y+KERR+ P+ +DE +FG
Sbjct: 252 TTDFTPSGAIGRCNSYRVSIPPRYGRKLEKAIDYLKERRVREFCLKSPLRIRDEPDFGLP 311
Query: 1050 ATDPFFCFHYKEGVSFANLFMVNALVHKGIFSQHRVTEEFFGLLNGQSELVNDVALRHIY 1229
+DPFFC YKEG++F +F+VNA +HKGIF+QH+++ FF LL Q+ VN AL+HI
Sbjct: 312 MSDPFFCIQYKEGIAFEIMFLVNAALHKGIFNQHQLSGNFFDLLKSQAMDVNVAALKHIC 371
Query: 1230 AYKKPVFDACRRLKMVQEWLLGFSRLIKIPTASEDNMEVRRLVITPTKAYCLPPEIELAN 1409
+Y+ PVFDA +RLK VQ+WLL +L K P +D +EVRRLVITPTKAYCLPPE+EL+N
Sbjct: 372 SYRSPVFDASKRLKSVQDWLLRNPKLFKSPKQLDDIVEVRRLVITPTKAYCLPPEVELSN 431
Query: 1410 RVLRRYRDMSDRFLRVTFMDEGMQQLNSNVLNFYVAPIVREISNNSPSQKTAMFRRVKNI 1589
RVLR+Y++++DRFLRVTFMDEGMQ +NSNVL++YVAPIVREI+ NS QKT +F+RV
Sbjct: 432 RVLRKYKEVADRFLRVTFMDEGMQTMNSNVLSYYVAPIVREITLNSFQQKTKIFQRVCTF 491
Query: 1590 VNKGFNLCGRKYSFLAFSSNQLRDRSAWFFAEDKHTSVHDITSWMGKFQDKNVAKYAARM 1769
+ GF++CGRKYSFLAFS+NQLRDRSAWFFAED++ SV++I WMGKF KN+AK AARM
Sbjct: 492 LRDGFHVCGRKYSFLAFSANQLRDRSAWFFAEDRNLSVNNIRDWMGKFDHKNIAKCAARM 551
Query: 1770 GQCFSSTYATVEVPSYEVVPFLPDIKRNTYCFSDGIGKITPDLAMEVAKKLQLTENPPSA 1949
GQCFSSTYATVEVPS EV PFLPDI+RN YCFSDGIG ITPDLA+EVA+KL+L NPPSA
Sbjct: 552 GQCFSSTYATVEVPSTEVNPFLPDIERNGYCFSDGIGIITPDLAVEVAEKLKLDMNPPSA 611
Query: 1950 YQIRYAGYKGVIAVWPGNDDGIRLSLRESMYKFQSEHTMLEVVSWTRFQPGFLNRQIVTL 2129
YQIRYAG KGV+A WP DDG RLSLR SM KFQS HT+LE+ SWTRFQPGFLNRQIVTL
Sbjct: 612 YQIRYAGCKGVVACWPAKDDGARLSLRPSMNKFQSRHTILEICSWTRFQPGFLNRQIVTL 671
Query: 2130 LSALEVPDDVFARMQDSMVCKLDQMLVNPDVAFDVLTTSCAEQGNVAAMMLSAGFDPQLE 2309
LS L V D++F MQ+SMV +L+QMLVN DVAFDVLT SCAE+GN AA+MLSAGF PQ+E
Sbjct: 672 LSTLNVRDEIFWTMQESMVSRLNQMLVNTDVAFDVLTASCAEEGNAAAIMLSAGFKPQIE 731
Query: 2310 PHLKAMLSCIRLSQLKDLSSKARIFVPKGRWLMGCFDELGVLEQGQCFIQASSPSLENCF 2489
PHL+ ML+CIR +QL DL KARIFVPKGRWLMGC DELGVLE GQCFIQ S+PSLENCF
Sbjct: 732 PHLRGMLTCIRAAQLWDLREKARIFVPKGRWLMGCLDELGVLEHGQCFIQVSTPSLENCF 791
Query: 2490 LKHGSKFSGTKENKQVIVGTVALAKNPCLHPGDVRILEAVDVPGLRHLVDCFVFPQKGDR 2669
KHGS+F+ N QVI G VA+AKNPCLHPGDVRILEAVD PGL HL DCFVFPQKGDR
Sbjct: 792 AKHGSRFTKRGNNLQVIKGYVAIAKNPCLHPGDVRILEAVDAPGLHHLHDCFVFPQKGDR 851
Query: 2670 PHSDEASGSDLDGDLYFVTWDENLIPPSRRSWMPMAYTPAQPKLEPRRIVHQDIIDFFVK 2849
PH +EASGSDLDGDLYFVTWDENLIPPS++SW PM Y PA+ +L R++ +DIIDFF +
Sbjct: 852 PHPNEASGSDLDGDLYFVTWDENLIPPSKKSWPPMEYAPAEARLLSRKVTSKDIIDFFAR 911
Query: 2850 NISNENLGVICNAHVVHADLSDYGAMDDNCLKLAELAATAVDFPKTGKMVHMPASLKPKL 3029
N+ NE+LG ICNAHVVHAD S+YGA+D++C+ LA+LAA AVDFPKTG +V MP+ LKPKL
Sbjct: 912 NMVNESLGAICNAHVVHADGSEYGALDEDCITLADLAAKAVDFPKTGVLVKMPSHLKPKL 971
Query: 3030 YPDFMDKYDQHSYKSEKILGRLYRKIKDASDE--DNSSELISVYQDLPFDENLEVHGASE 3203
YPDFM K D SYKS KILGRLYR++KDA DE D SEL V D+P+D +L+V G+ +
Sbjct: 972 YPDFMGKDDNQSYKSTKILGRLYRQVKDAYDEDIDAPSELNFVPDDVPYDSDLKVSGSDD 1031
Query: 3204 YLVEAWETKCSYDRQLNALLGQFRVDKEGEVVTGHLCSMGKHNSRKQGEIKERLKNAYYA 3383
++++AW KCSY+ QL LLGQ++V +E E+VTGH+ SM +N RKQG++KE+LK++Y +
Sbjct: 1032 FIMDAWHQKCSYNGQLIGLLGQYKVKREEEIVTGHIWSMPNYNRRKQGDLKEKLKHSYSS 1091
Query: 3384 LNKKYRRAFEDVGTDLLQLTDEEKNVRYEKKASAWYCVTYHPKWV------EKSVAMREA 3545
L K++R+ FE + +D QLTD+EKNV YE+KASAWY VTY P WV +KSV + E+
Sbjct: 1092 LKKEFRQIFEHIDSDFEQLTDDEKNVVYEQKASAWYQVTYDPYWVNKSLDLQKSVDLLES 1151
Query: 3546 DGERVPPRLSFAWIPADYLVRIKIKS-RDGKVGTGKPIDSLASYLYERM 3689
DG R LSFAWI ADYL RIKI+S V + KP++SL YL +R+
Sbjct: 1152 DGPRDVVMLSFAWIAADYLARIKIRSGGSDNVDSAKPVNSLKRYLIDRI 1200
>ref|XP_021597106.1| RNA-dependent RNA polymerase 6 [Manihot esculenta]
gb|OAY27377.1| hypothetical protein MANES_16G121400 [Manihot esculenta]
Length = 1199
Score = 1428 bits (3696), Expect = 0.0
Identities = 709/1124 (63%), Positives = 858/1124 (76%), Gaps = 5/1124 (0%)
Frame = +3
Query: 333 FLQFATPAGAQRVLDAAARCELVLGSKPLIARASSDTSYRIN-RRRSIDPFTFPDARFEI 509
F+ FA+P A +AA RCEL L +PL + Y +N RRR+ PF D EI
Sbjct: 80 FVHFASPQSATWAKNAAGRCELFLNDRPLKVSLGPENPYHMNQRRRTTTPFKLSDVHVEI 139
Query: 510 GSLTSPTHFLAAWKLDPKPESSVNFLIDPFDNSCKLLFTGDVAFTANGTREFEVIRCNFK 689
G+L S FL W P S V+FL+DPFD +CK FT D AF+ T E VIRC+FK
Sbjct: 140 GTL-SRNEFLVGWS---GPSSGVDFLVDPFDGTCKFCFTRDTAFSVKDTTEHAVIRCDFK 195
Query: 690 LEFLLRDVMELKIGADGMQHVLMFQLSLGAAPLVYYRTADDDIHNSVEWNLLDDEDPWIR 869
LEFL+RD+ E+K D L+ L L +AP V+YRTADDDI +NLLDD+DPWIR
Sbjct: 196 LEFLVRDINEVKQYTDWNTSSLVILLQLVSAPFVWYRTADDDIEVLAPFNLLDDDDPWIR 255
Query: 870 TTDFTPSGAIGRCNCYRISMKPRFGPKLKRAMEYMKERRIDGLRPDRPIVFKDEANFGEI 1049
TTDFTPSGAIGRCN YR+S+ PR G KL RA+ Y+KERR+ P+ +E +G
Sbjct: 256 TTDFTPSGAIGRCNSYRVSIPPRHGAKLNRALNYLKERRVQLEFLKMPLKNSNEPEYGMP 315
Query: 1050 ATDPFFCFHYKEGVSFANLFMVNALVHKGIFSQHRVTEEFFGLLNGQSELVNDVALRHIY 1229
+D FFC H+KEG++F +F+VNA++HKGIF+QH++++ FF LL Q VN AL+HI
Sbjct: 316 MSDAFFCIHHKEGIAFEVMFLVNAVMHKGIFNQHQLSDSFFDLLRSQPLDVNLSALKHIC 375
Query: 1230 AYKKPVFDACRRLKMVQEWLLGFSRLIKIPTASEDNMEVRRLVITPTKAYCLPPEIELAN 1409
+YK+PVFDA LK VQ+WLL +L K P +D +E+RRL ITPT+AYCLPPE+EL+N
Sbjct: 376 SYKRPVFDAYCCLKAVQQWLLNNPKLFKSPKQLDDIVEIRRLAITPTRAYCLPPEVELSN 435
Query: 1410 RVLRRYRDMSDRFLRVTFMDEGMQQLNSNVLNFYVAPIVREISNNSPSQKTAMFRRVKNI 1589
RVLR+Y+D++DRFLRVTFMDEG+Q +N+N L +YVAPIVREI++NS SQKT +F+RVK I
Sbjct: 436 RVLRKYKDIADRFLRVTFMDEGLQTINANTLTYYVAPIVREITSNSFSQKTRVFKRVKGI 495
Query: 1590 VNKGFNLCGRKYSFLAFSSNQLRDRSAWFFAEDKHTSVHDITSWMGKFQDKNVAKYAARM 1769
+ GF LCGR+YSFLAFSSNQLRDRSAWFFAE+ SVH I SWMG+F ++N+AK AARM
Sbjct: 496 LTDGFYLCGRRYSFLAFSSNQLRDRSAWFFAENAEISVHQIRSWMGRFTNRNIAKCAARM 555
Query: 1770 GQCFSSTYATVEVPSYEVVPFLPDIKRNTYCFSDGIGKITPDLAMEVAKKLQLTENPPSA 1949
GQCFSSTYATVEVPS EV LPDI+RN Y FSDGIG ITPDLA EVA+KL+L NPP A
Sbjct: 556 GQCFSSTYATVEVPSGEVNLSLPDIERNGYIFSDGIGTITPDLAKEVAEKLKLDANPPCA 615
Query: 1950 YQIRYAGYKGVIAVWPGNDDGIRLSLRESMYKFQSEHTMLEVVSWTRFQPGFLNRQIVTL 2129
YQIRYAG KGV+A WP DGIRLSLR SM KFQS HT LE+ SWTRFQPGFLNRQI+TL
Sbjct: 616 YQIRYAGCKGVVACWPAQGDGIRLSLRPSMNKFQSNHTTLEICSWTRFQPGFLNRQIITL 675
Query: 2130 LSALEVPDDVFARMQDSMVCKLDQMLVNPDVAFDVLTTSCAEQGNVAAMMLSAGFDPQLE 2309
LS L+VPD++F MQ MV KLDQML++ DVAFDV+T SCAEQGN AA+MLSAGF PQ E
Sbjct: 676 LSVLQVPDEIFWEMQFDMVSKLDQMLMDADVAFDVITASCAEQGNTAAIMLSAGFKPQKE 735
Query: 2310 PHLKAMLSCIRLSQLKDLSSKARIFVPKGRWLMGCFDELGVLEQGQCFIQASSPSLENCF 2489
PHL+ ML+CIR +QL L KARIFV GRWLMGC DELGVLEQGQCFIQ S+PSLENCF
Sbjct: 736 PHLQGMLTCIRAAQLWGLREKARIFVSSGRWLMGCLDELGVLEQGQCFIQVSNPSLENCF 795
Query: 2490 LKHGSKFSGTKENKQVIVGTVALAKNPCLHPGDVRILEAVDVPGLRHLVDCFVFPQKGDR 2669
LKHGS+FS K+N +VI GTV +AKNPCLHPGDVRILEAVD P L HL DC +FPQKGDR
Sbjct: 796 LKHGSRFSEIKKNLEVIKGTVVIAKNPCLHPGDVRILEAVDAPELHHLHDCLIFPQKGDR 855
Query: 2670 PHSDEASGSDLDGDLYFVTWDENLIPPSRRSWMPMAYTPAQPKLEPRRIVHQDIIDFFVK 2849
PH++EASGSDLDGDLYFVTWDENLIPPS+RSW PM Y A+ K+ R + QDIIDFF +
Sbjct: 856 PHTNEASGSDLDGDLYFVTWDENLIPPSKRSWTPMQYNAAEAKVLNRPVRSQDIIDFFAR 915
Query: 2850 NISNENLGVICNAHVVHADLSDYGAMDDNCLKLAELAATAVDFPKTGKMVHMPASLKPKL 3029
++ NENLG ICNAHVV ADLS+YGA+DDNC+KLAELAATAVDFPKTG +V MP L+PK+
Sbjct: 916 HMVNENLGAICNAHVVRADLSEYGALDDNCIKLAELAATAVDFPKTGMLVTMPPYLRPKM 975
Query: 3030 YPDFMDKYDQHSYKSEKILGRLYRKIKDASDED---NSSELISVYQDLPFDENLEVHGAS 3200
YPDFM K D SYKS KILGRLYR++KDA D++ SSEL V D+P+D +LEV G+S
Sbjct: 976 YPDFMGKEDYQSYKSTKILGRLYRQVKDACDDNVVAASSELNIVPGDIPYDRDLEVSGSS 1035
Query: 3201 EYLVEAWETKCSYDRQLNALLGQFRVDKEGEVVTGHLCSMGKHNSRKQGEIKERLKNAYY 3380
+Y++EAW+ KCSYD QL L+GQ++V +E EVVTGH+ SM K+NSRK GE+KERLK +Y
Sbjct: 1036 DYILEAWDQKCSYDGQLKGLMGQYKVKREEEVVTGHIWSMPKYNSRKNGELKERLKQSYS 1095
Query: 3381 ALNKKYRRAFEDVGTDLLQLTDEEKNVRYEKKASAWYCVTYHPKWVEKSVAMREADGERV 3560
L K++R+ FE + D QL+D+EKN+ YE+KASAWY V YHP W++KS+ ++ + +
Sbjct: 1096 GLKKEFRQVFEKMDLDFEQLSDDEKNLLYERKASAWYQVAYHPTWIKKSLELQGPEADDS 1155
Query: 3561 PPRLSFAWIPADYLVRIKIKSRDGK-VGTGKPIDSLASYLYERM 3689
LSFAWI ADYL RIKIK R + V T KP++SL YL +R+
Sbjct: 1156 AAMLSFAWIAADYLARIKIKCRGIEGVDTSKPVNSLVKYLADRI 1199
>ref|XP_011026450.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Populus euphratica]
Length = 1200
Score = 1427 bits (3694), Expect = 0.0
Identities = 707/1126 (62%), Positives = 877/1126 (77%), Gaps = 7/1126 (0%)
Frame = +3
Query: 333 FLQFATPAGAQRVLDAAARCELVLGSKPLIARASSDTSYRINR-RRSIDPFTFPDARFEI 509
F+ FA P A ++A+ RCEL L K L + +N+ RR+ PF D FEI
Sbjct: 80 FVHFALPQSATWAMNASERCELFLNDKALKVSLGPKNPFTLNQQRRTTTPFKLSDVGFEI 139
Query: 510 GSLTSPTHFLAAWKLDPKPESSVNFLIDPFDNSCKLLFTGDVAFTANGTREFEVIRCNFK 689
GSL S F W+ P S V+FL+DPFD +C+ F+ + AF+ T E VI+C FK
Sbjct: 140 GSLVSHDEFFVGWR---GPPSGVDFLVDPFDGTCRFCFSRNTAFSLKSTSEHAVIKCAFK 196
Query: 690 LEFLLRDVMELKIGADGMQHVLMFQLSLGAAPLVYYRTADDDIHNSVEWNLLDDEDPWIR 869
+EFL+RD+ E+ + VL+ QL+ +AP V+YRTADDDI V ++LLDD+DPWIR
Sbjct: 197 VEFLVRDINEIIQYTETSCLVLLLQLA--SAPWVWYRTADDDIEAWVPFDLLDDDDPWIR 254
Query: 870 TTDFTPSGAIGRCNCYRISMKPRFGPKLKRAMEYMKERRIDGLRPD---RPIVFKDEANF 1040
TTDFT SGAIGRC+ YR+S+ PR G KL++A++Y+KERR++ L+ + R I DE +F
Sbjct: 255 TTDFTGSGAIGRCHSYRVSIPPRHGSKLRKAVKYLKERRVEVLQEENHRRRIRILDEPDF 314
Query: 1041 GEIATDPFFCFHYKEGVSFANLFMVNALVHKGIFSQHRVTEEFFGLLNGQSELVNDVALR 1220
G +DPFFC H+KEG++F LF+VNA++HKGIF+QH+++ +FF LL Q VN AL+
Sbjct: 315 GMPMSDPFFCIHHKEGIAFDVLFLVNAVMHKGIFNQHQLSNDFFDLLRNQHTEVNVSALK 374
Query: 1221 HIYAYKKPVFDACRRLKMVQEWLLGFSRLIKIPTASEDNMEVRRLVITPTKAYCLPPEIE 1400
HI Y++PVF+A +RLK VQEWLL L K P D +E+RRLVITPTKAYCLPPE+E
Sbjct: 375 HICTYRRPVFNAYKRLKAVQEWLLKNPNLFKNPKQLGDIVEIRRLVITPTKAYCLPPEVE 434
Query: 1401 LANRVLRRYRDMSDRFLRVTFMDEGMQQLNSNVLNFYVAPIVREISNNSPSQKTAMFRRV 1580
L+NRVLR+Y+D++DRFLRVTFMDEG+Q++NSNVLN+YVAPIVR+I++NS QKT +F+RV
Sbjct: 435 LSNRVLRKYKDVADRFLRVTFMDEGLQRMNSNVLNYYVAPIVRDITSNSFHQKTRIFKRV 494
Query: 1581 KNIVNKGFNLCGRKYSFLAFSSNQLRDRSAWFFAEDKHTSVHDITSWMGKFQDKNVAKYA 1760
++I+ +GF LCGR+YSFLAFS+NQLRD+SAWFFAE+++ SV DI SWMGKF ++N+AK A
Sbjct: 495 RSILTEGFYLCGRRYSFLAFSANQLRDQSAWFFAEERNVSVLDIKSWMGKFTNRNIAKCA 554
Query: 1761 ARMGQCFSSTYATVEVPSYEVVPFLPDIKRNTYCFSDGIGKITPDLAMEVAKKLQLTENP 1940
ARMGQCFSSTYAT+EVP EV LPDI+RN Y FSDGIG ITPDLA EVA+KL+L +P
Sbjct: 555 ARMGQCFSSTYATIEVPPEEVNFDLPDIERNGYVFSDGIGIITPDLAREVAEKLKLDIDP 614
Query: 1941 PSAYQIRYAGYKGVIAVWPGNDDGIRLSLRESMYKFQSEHTMLEVVSWTRFQPGFLNRQI 2120
P AYQIRYAG KGV+A WPG DG+ LSLR SM KFQS HT LE+ SWTRFQPGFLNRQI
Sbjct: 615 PCAYQIRYAGCKGVVACWPGKGDGVHLSLRPSMNKFQSNHTTLEICSWTRFQPGFLNRQI 674
Query: 2121 VTLLSALEVPDDVFARMQDSMVCKLDQMLVNPDVAFDVLTTSCAEQGNVAAMMLSAGFDP 2300
+TLLS L VPD VF +MQ++MV KL+QM VN DVAFDVLT SCA+QGNVAA+MLSAGF P
Sbjct: 675 ITLLSTLNVPDAVFWKMQETMVSKLNQMFVNSDVAFDVLTASCADQGNVAAIMLSAGFKP 734
Query: 2301 QLEPHLKAMLSCIRLSQLKDLSSKARIFVPKGRWLMGCFDELGVLEQGQCFIQASSPSLE 2480
Q EPHL+ ML+C+R +QL L KARIFVP GRWLMGC DELG+LEQGQCFIQ S+ SLE
Sbjct: 735 QKEPHLRGMLTCVRAAQLWGLREKARIFVPSGRWLMGCLDELGMLEQGQCFIQVSNSSLE 794
Query: 2481 NCFLKHGSKFSGTKENKQVIVGTVALAKNPCLHPGDVRILEAVDVPGLRHLVDCFVFPQK 2660
CF+KHG+KFS K+N QV+ GTV +AKNPCLHPGDVR+LEAVDVPGL HL DC VFPQK
Sbjct: 795 KCFIKHGAKFSEAKKNLQVVKGTVVIAKNPCLHPGDVRVLEAVDVPGLHHLYDCLVFPQK 854
Query: 2661 GDRPHSDEASGSDLDGDLYFVTWDENLIPPSRRSWMPMAYTPAQPKLEPRRIVHQDIIDF 2840
G+RPH++EASGSDLDGDLYFVTWDENLIPPS+RSW+PM Y A+ KL R + HQDII+F
Sbjct: 855 GERPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWIPMQYDAAEAKLLARPVNHQDIIEF 914
Query: 2841 FVKNISNENLGVICNAHVVHADLSDYGAMDDNCLKLAELAATAVDFPKTGKMVHMPASLK 3020
F KN+ NENLG ICNAHVVHADLS++GAMD+ CL LAELAATAVDFPKTGK+V MP+ LK
Sbjct: 915 FAKNMVNENLGAICNAHVVHADLSEHGAMDEKCLTLAELAATAVDFPKTGKVVTMPSYLK 974
Query: 3021 PKLYPDFMDKYDQHSYKSEKILGRLYRKIKDASDED--NSSELISVYQDLPFDENLEVHG 3194
PK+YPDFM K + SYKSEKILGRLYR+IKDA DED SSEL V D+P+D +LEV G
Sbjct: 975 PKVYPDFMGKEEYQSYKSEKILGRLYRQIKDAYDEDVAASSELNPVPGDIPYDSDLEVVG 1034
Query: 3195 ASEYLVEAWETKCSYDRQLNALLGQFRVDKEGEVVTGHLCSMGKHNSRKQGEIKERLKNA 3374
AS+Y+ +AW+ KCSYD QLN LL Q++V +E E+VTGH+ SM K++SRKQGE+K+RLK++
Sbjct: 1035 ASDYINDAWDQKCSYDGQLNGLLSQYKVKREEELVTGHIWSMPKYSSRKQGELKDRLKHS 1094
Query: 3375 YYALNKKYRRAFEDVGTDLLQLTDEEKNVRYEKKASAWYCVTYHPKWVEKSVAMREADGE 3554
Y +L K++R+ FE + + QL D EKN YE+KASAWY V YHP WV+KS+ +++ DG
Sbjct: 1095 YNSLKKEFRQIFEKMDLEFEQLEDGEKNKLYEQKASAWYQVAYHPHWVKKSLELQDPDGA 1154
Query: 3555 RVPPRLSFAWIPADYLVRIKIKSRD-GKVGTGKPIDSLASYLYERM 3689
LSF WI ADYL RIKI+ R+ G V + KP++SLA YL +R+
Sbjct: 1155 GTSVMLSFGWIAADYLARIKIRHRETGNVDSAKPVNSLAKYLADRI 1200
>ref|XP_012071453.1| RNA-dependent RNA polymerase 6 isoform X1 [Jatropha curcas]
ref|XP_020534693.1| RNA-dependent RNA polymerase 6 isoform X2 [Jatropha curcas]
gb|KDP38635.1| hypothetical protein JCGZ_03988 [Jatropha curcas]
Length = 1198
Score = 1426 bits (3692), Expect = 0.0
Identities = 713/1126 (63%), Positives = 862/1126 (76%), Gaps = 7/1126 (0%)
Frame = +3
Query: 333 FLQFATPAGAQRVLDAAARCELVLGSKPLIARASSDTSYRIN-RRRSIDPFTFPDARFEI 509
F+ FA A +AA RCEL L +PL + + +N RRR P D EI
Sbjct: 80 FVHFALAESATWAKNAAGRCELFLNDRPLKVSLGPENPFTLNQRRRKTIPSKLSDVCIEI 139
Query: 510 GSLTSPTHFLAAWKLDPKPESSVNFLIDPFDNSCKLLFTGDVAFTANGTREFEVIRCNFK 689
G + S FL W+ P S V+FL+DPFD +CK FT D AF+ T + VIRC+FK
Sbjct: 140 GMMVSRDEFLVGWR---GPPSGVDFLVDPFDGTCKFCFTRDTAFSIKDTNKHAVIRCDFK 196
Query: 690 LEFLLRDVMELKIGADGMQHVLMFQLSLGAAPLVYYRTADDDIHNSVEWNLLDDEDPWIR 869
LEFL+RD+ E+K D V++ QL+ +AP V+YRTADDDI V +NLLDD+DPWIR
Sbjct: 197 LEFLVRDINEIKQYKDTSYLVILLQLA--SAPWVWYRTADDDIEVLVPFNLLDDDDPWIR 254
Query: 870 TTDFTPSGAIGRCNCYRISMKPRFGPKLKRAMEYMKERR--IDGLRPDRPIVFKDEANFG 1043
TTDFTPSGAIGRCN YR+S+ PR G KL+RA+ Y+KERR +D LR RP+ +E ++G
Sbjct: 255 TTDFTPSGAIGRCNSYRVSIPPRHGAKLERAINYLKERRVQVDSLR--RPLKILNEPDYG 312
Query: 1044 EIATDPFFCFHYKEGVSFANLFMVNALVHKGIFSQHRVTEEFFGLLNGQSELVNDVALRH 1223
+DPFFC H KEG++F +F+VNA++HKGIF+QH+++++FF LL Q +N AL+H
Sbjct: 313 MPMSDPFFCIHRKEGIAFEIVFLVNAVMHKGIFNQHQLSDDFFDLLRNQPADINVAALKH 372
Query: 1224 IYAYKKPVFDACRRLKMVQEWLLGFSRLIKIPTASEDNMEVRRLVITPTKAYCLPPEIEL 1403
I +YK+PVFDA RRLK VQEWLL +L K P +D +++RRL ITPT+AYCLPPEIEL
Sbjct: 373 ICSYKRPVFDAHRRLKAVQEWLLKNPKLFKCPKQLDDIVQIRRLAITPTRAYCLPPEIEL 432
Query: 1404 ANRVLRRYRDMSDRFLRVTFMDEGMQQLNSNVLNFYVAPIVREISNNSPSQKTAMFRRVK 1583
+NRVLR+Y++ +DRFLRVTFMDEG+Q +N+N L +YVAPIVR+I++ S SQKT +F+RVK
Sbjct: 433 SNRVLRKYKNFADRFLRVTFMDEGLQTINANTLTYYVAPIVRDITSTSFSQKTRIFKRVK 492
Query: 1584 NIVNKGFNLCGRKYSFLAFSSNQLRDRSAWFFAEDKHTSVHDITSWMGKFQDKNVAKYAA 1763
+I+ GF LCGR+YSFLAFSSNQLRDRSAWFFAED V I WMGKF +KN+AK AA
Sbjct: 493 SILTDGFYLCGRRYSFLAFSSNQLRDRSAWFFAEDGKIRVDQIRKWMGKFTNKNIAKCAA 552
Query: 1764 RMGQCFSSTYATVEVPSYEVVPFLPDIKRNTYCFSDGIGKITPDLAMEVAKKLQLTENPP 1943
RMGQCFSSTYATVEVPS EV PDI+RN Y FSDGIG ITPDLA VA+KL+L NPP
Sbjct: 553 RMGQCFSSTYATVEVPSAEVNLAHPDIERNGYTFSDGIGMITPDLAKAVAEKLKLDINPP 612
Query: 1944 SAYQIRYAGYKGVIAVWPGNDDGIRLSLRESMYKFQSEHTMLEVVSWTRFQPGFLNRQIV 2123
AYQIRYAG KGV+A WP DGIRLSLR SM KFQS HT LE+ SWTRFQPGFLNRQI+
Sbjct: 613 CAYQIRYAGCKGVVACWPAQGDGIRLSLRPSMNKFQSNHTTLEICSWTRFQPGFLNRQII 672
Query: 2124 TLLSALEVPDDVFARMQDSMVCKLDQMLVNPDVAFDVLTTSCAEQGNVAAMMLSAGFDPQ 2303
TLLS L V D++F +MQ +MV KL++ML + DVAFDV+T SC EQGN AA+MLSAGF PQ
Sbjct: 673 TLLSTLNVSDEIFWKMQIAMVSKLNKMLTDADVAFDVITASCTEQGNTAALMLSAGFKPQ 732
Query: 2304 LEPHLKAMLSCIRLSQLKDLSSKARIFVPKGRWLMGCFDELGVLEQGQCFIQASSPSLEN 2483
EPHL+ ML+CIR +Q DL KARIFV GRWLMGC DELGVLEQGQCFIQ S+PSLE
Sbjct: 733 NEPHLRGMLTCIRAAQFCDLREKARIFVSSGRWLMGCLDELGVLEQGQCFIQVSNPSLET 792
Query: 2484 CFLKHGSKFSGTKENKQVIVGTVALAKNPCLHPGDVRILEAVDVPGLRHLVDCFVFPQKG 2663
CF KHGS+FS TK+N QVI GTV +AKNPCLHPGDVRILEAVD PGL HL DC VFPQKG
Sbjct: 793 CFSKHGSRFSETKKNLQVITGTVVIAKNPCLHPGDVRILEAVDAPGLCHLHDCLVFPQKG 852
Query: 2664 DRPHSDEASGSDLDGDLYFVTWDENLIPPSRRSWMPMAYTPAQPKLEPRRIVHQDIIDFF 2843
DRPH++EASGSDLDGDLYFVTWDENLIPPS++SW PM Y A+PKL R + HQDIIDFF
Sbjct: 853 DRPHTNEASGSDLDGDLYFVTWDENLIPPSKQSWTPMQYDAAEPKLLSRPVSHQDIIDFF 912
Query: 2844 VKNISNENLGVICNAHVVHADLSDYGAMDDNCLKLAELAATAVDFPKTGKMVHMPASLKP 3023
KN+ NE+LG ICNAHVV ADLS+YGA+D+NC+KLAELAATAVDFPKTGK+V +P LKP
Sbjct: 913 AKNMVNESLGAICNAHVVRADLSEYGALDENCIKLAELAATAVDFPKTGKLVTLPQYLKP 972
Query: 3024 KLYPDFMDKYDQHSYKSEKILGRLYRKIKDASDEDN---SSELISVYQDLPFDENLEVHG 3194
K+YPDFM K + SYKS KILGRLYR IKDA +D+ SSEL D+P+D NLEV G
Sbjct: 973 KMYPDFMGKEEYQSYKSTKILGRLYRDIKDAYGDDDAAASSELNCSSGDIPYDTNLEVLG 1032
Query: 3195 ASEYLVEAWETKCSYDRQLNALLGQFRVDKEGEVVTGHLCSMGKHNSRKQGEIKERLKNA 3374
+++Y++EAW+ KCSYD QL LLGQ++V KE E+VTGH+ SM +NSRK GE+KERLK++
Sbjct: 1033 SADYILEAWDQKCSYDGQLKGLLGQYKVKKEEELVTGHIWSMPMYNSRKLGELKERLKHS 1092
Query: 3375 YYALNKKYRRAFEDVGTDLLQLTDEEKNVRYEKKASAWYCVTYHPKWVEKSVAMREADGE 3554
Y AL K++R+ FE + D QLTD+EKN+ YE+KASAWY VTYHPKW++KS+ ++E D
Sbjct: 1093 YSALKKEFRQVFEKMDLDFEQLTDDEKNLLYERKASAWYQVTYHPKWIKKSLELQEPDAA 1152
Query: 3555 RVPPRLSFAWIPADYLVRIKIKSRDGK-VGTGKPIDSLASYLYERM 3689
LSFAWI ADYL RIKIK R + V T KP++SL YL +R+
Sbjct: 1153 GNATILSFAWIAADYLARIKIKHRGTEGVDTAKPVNSLVKYLADRI 1198
>ref|XP_018822243.1| PREDICTED: RNA-dependent RNA polymerase 6 [Juglans regia]
ref|XP_018822244.1| PREDICTED: RNA-dependent RNA polymerase 6 [Juglans regia]
ref|XP_018822245.1| PREDICTED: RNA-dependent RNA polymerase 6 [Juglans regia]
Length = 1199
Score = 1426 bits (3691), Expect = 0.0
Identities = 701/1123 (62%), Positives = 865/1123 (77%), Gaps = 4/1123 (0%)
Frame = +3
Query: 333 FLQFATPAGAQRVLDAAARCELVLGSKPLIARASSDTSYRIN-RRRSIDPFTFPDARFEI 509
F+ FATP LDAA RC+L L + L + + + RRR+ P D E+
Sbjct: 82 FVHFATPKSVDWALDAAGRCDLFLNKQQLKVSLGFQSPFHLRQRRRTTTPHKLSDVLVEV 141
Query: 510 GSLTSPTHFLAAWKLDPKPESSVNFLIDPFDNSCKLLFTGDVAFTANGTREFEVIRCNFK 689
G+L S F AW+ P V+FL+DPFD +CK FT F+ T ++ VI+CNFK
Sbjct: 142 GTLVSRDEFFVAWRGAPY---GVDFLVDPFDGTCKFCFTRATVFSFKSTSKYAVIKCNFK 198
Query: 690 LEFLLRDVMELKIGADGMQHVLMFQLSLGAAPLVYYRTADDDIHNSVEWNLLDDEDPWIR 869
+EF++RD+ E+K D V++ L L ++P ++YRTADDDI SV ++LLDD+DPWIR
Sbjct: 199 MEFVVRDISEIKRYNDTSYLVIL--LHLASSPCIWYRTADDDIEESVPYDLLDDDDPWIR 256
Query: 870 TTDFTPSGAIGRCNCYRISMKPRFGPKLKRAMEYMKERRIDGLRPDRPIVFKDEANFGEI 1049
TTDFTPSGAIGRC+ YR+S+ PR G KL+R MEY+KE+R+ + ++P+ +DE FG
Sbjct: 257 TTDFTPSGAIGRCSSYRVSIPPRHGVKLRRTMEYLKEQRVHEICLEKPLRIRDEPEFGLP 316
Query: 1050 ATDPFFCFHYKEGVSFANLFMVNALVHKGIFSQHRVTEEFFGLLNGQSELVNDVALRHIY 1229
+DPFFC YK+G++F +F+VNA++HKGIFSQH++++ FF LL Q + VN AL+HI
Sbjct: 317 LSDPFFCIQYKQGIAFEIMFLVNAVLHKGIFSQHQLSDNFFSLLRSQPKEVNIAALKHIC 376
Query: 1230 AYKKPVFDACRRLKMVQEWLLGFSRLIKIPTASEDNMEVRRLVITPTKAYCLPPEIELAN 1409
+Y++PVF+A RRLK VQ+WLL +L K P +D +EVRRLVITP KAYCLPPE+EL+N
Sbjct: 377 SYRRPVFNALRRLKTVQDWLLRNPKLFKSPRRLDDIVEVRRLVITPAKAYCLPPEVELSN 436
Query: 1410 RVLRRYRDMSDRFLRVTFMDEGMQQLNSNVLNFYVAPIVREISNNSPSQKTAMFRRVKNI 1589
RVLR+Y+ ++DRFLRVTFMDEGMQ +NSNVLN YVAPIV+ I++NS QKT +F+RV I
Sbjct: 437 RVLRKYKGVADRFLRVTFMDEGMQTMNSNVLNSYVAPIVKLITSNSYPQKTKIFQRVNTI 496
Query: 1590 VNKGFNLCGRKYSFLAFSSNQLRDRSAWFFAEDKHTSVHDITSWMGKFQDKNVAKYAARM 1769
+ GF++CGR+YSFLAFSSNQLRDRSAWFFAED T+V +I +WMGKF KN+AK AARM
Sbjct: 497 LKSGFHVCGREYSFLAFSSNQLRDRSAWFFAEDGKTNVVNIRNWMGKFTQKNIAKCAARM 556
Query: 1770 GQCFSSTYATVEVPSYEVVPFLPDIKRNTYCFSDGIGKITPDLAMEVAKKLQLTENPPSA 1949
GQCFSSTYATVEVP EV P LPD++RN Y FSDGIG ITPDLA +VA+KL+L NPP A
Sbjct: 557 GQCFSSTYATVEVPPKEVNPKLPDVERNDYIFSDGIGMITPDLANKVAEKLKLDGNPPCA 616
Query: 1950 YQIRYAGYKGVIAVWPGNDDGIRLSLRESMYKFQSEHTMLEVVSWTRFQPGFLNRQIVTL 2129
YQIRYAG+KGV+A WP DG+RLSLR SM KF S+HT LE+ SWTRFQPGFLNRQIVTL
Sbjct: 617 YQIRYAGFKGVVACWPAKGDGVRLSLRPSMNKFISDHTTLEICSWTRFQPGFLNRQIVTL 676
Query: 2130 LSALEVPDDVFARMQDSMVCKLDQMLVNPDVAFDVLTTSCAEQGNVAAMMLSAGFDPQLE 2309
LS L VPD++F +MQDSM+ +L+QMLV+ DVAFDVLT SCAEQGN AA+MLSAGF+PQ E
Sbjct: 677 LSTLNVPDEIFWKMQDSMLSRLNQMLVDTDVAFDVLTASCAEQGNAAAIMLSAGFEPQSE 736
Query: 2310 PHLKAMLSCIRLSQLKDLSSKARIFVPKGRWLMGCFDELGVLEQGQCFIQASSPSLENCF 2489
PHL+ ML+CIR +Q L KARIFVP GRWLMGC DELGVLEQGQCFIQ S+PSLENCF
Sbjct: 737 PHLRGMLTCIRAAQHWGLREKARIFVPSGRWLMGCLDELGVLEQGQCFIQVSTPSLENCF 796
Query: 2490 LKHGSKFSGTKENKQVIVGTVALAKNPCLHPGDVRILEAVDVPGLRHLVDCFVFPQKGDR 2669
KHGS+F+ N QVI G V +AKNPCLHPGD+RILEAVD PGL HL DC VFPQKGDR
Sbjct: 797 SKHGSRFTEKANNLQVIKGHVVIAKNPCLHPGDIRILEAVDDPGLHHLFDCLVFPQKGDR 856
Query: 2670 PHSDEASGSDLDGDLYFVTWDENLIPPSRRSWMPMAYTPAQPKLEPRRIVHQDIIDFFVK 2849
PH+DEASGSDLDGDLYFVTWDENLIPPS+ SW PM YTPA+ K R++ QDIIDFF +
Sbjct: 857 PHTDEASGSDLDGDLYFVTWDENLIPPSKESWPPMKYTPAETKRTARQVTTQDIIDFFAR 916
Query: 2850 NISNENLGVICNAHVVHADLSDYGAMDDNCLKLAELAATAVDFPKTGKMVHMPASLKPKL 3029
N+ NE+LG ICNAHVVHAD S+YGA+D+NCL LA+LAA AVDFPKTG +V MP LKPKL
Sbjct: 917 NMVNESLGTICNAHVVHADSSEYGALDENCLTLADLAAKAVDFPKTGHIVIMPQHLKPKL 976
Query: 3030 YPDFMDKYDQHSYKSEKILGRLYRKIKDASDED--NSSELISVYQDLPFDENLEVHGASE 3203
YPDFM K D SYKS KILGRLYR++KDA DED SS+L V D+P+D +LEV G+++
Sbjct: 977 YPDFMGKEDYQSYKSTKILGRLYRQVKDAYDEDVVTSSQLDVVPADVPYDTDLEVPGSAD 1036
Query: 3204 YLVEAWETKCSYDRQLNALLGQFRVDKEGEVVTGHLCSMGKHNSRKQGEIKERLKNAYYA 3383
++++AW+ K SYD QLN LLGQ++V +E E+VTGH+ SM K+NSRKQGE+KE+LK +Y A
Sbjct: 1037 FIMDAWDQKRSYDGQLNGLLGQYKVKREEEIVTGHIWSMPKYNSRKQGELKEKLKQSYSA 1096
Query: 3384 LNKKYRRAFEDVGTDLLQLTDEEKNVRYEKKASAWYCVTYHPKWVEKSVAMREADGERVP 3563
L K++R F+ + +D LTD+EKNV YE+KASAWY V YHPKWV++S+ ++E DG
Sbjct: 1097 LKKEFRLVFDKLDSDFEGLTDDEKNVYYERKASAWYQVAYHPKWVKRSLELQEPDGPEDV 1156
Query: 3564 PRLSFAWIPADYLVRIKIKSRD-GKVGTGKPIDSLASYLYERM 3689
LSF+WI ADYL RIKIKSR KPI+SLA YL +R+
Sbjct: 1157 VMLSFSWIAADYLARIKIKSRRMVNFDYSKPINSLARYLIDRI 1199