BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00005495
         (1238 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK70128.1| uncharacterized protein A4U43_C05F30550 [Asparagu...   555   0.0  
ref|XP_020265363.1| LOW QUALITY PROTEIN: DNA-directed RNA polyme...   555   0.0  
ref|XP_010922210.1| PREDICTED: DNA-directed RNA polymerase I sub...   472   e-149
ref|XP_008798769.1| PREDICTED: DNA-directed RNA polymerase I sub...   465   e-147
gb|AIO05696.1| putative RNA polymerase AI large subunit, partial...   455   e-143
ref|XP_009394527.1| PREDICTED: DNA-directed RNA polymerase I sub...   441   e-138
ref|XP_020114580.1| DNA-directed RNA polymerase I subunit 1 [Ana...   440   e-137
ref|XP_009407703.1| PREDICTED: DNA-directed RNA polymerase I sub...   434   e-135
gb|ACN85329.1| putative RNA polymerase A(I) large subunit, parti...   377   e-117
gb|ACN85301.1| putative RNA polymerase A(I) large subunit [Oryza...   382   e-116
gb|ACN85238.1| putative RNA polymerase A(I) large subunit, parti...   357   e-115
gb|KQL11441.1| hypothetical protein SETIT_005673mg [Setaria ital...   379   e-115
ref|XP_022681373.1| DNA-directed RNA polymerase I subunit 1 [Set...   379   e-115
ref|XP_006656244.2| PREDICTED: DNA-directed RNA polymerase I sub...   377   e-114
gb|EEC80966.1| hypothetical protein OsI_23688 [Oryza sativa Indi...   367   e-112
ref|XP_015643540.1| PREDICTED: DNA-directed RNA polymerase I sub...   365   e-110
gb|ONL97757.1| DNA-directed RNA polymerase I subunit 1 [Zea mays]     356   e-110
gb|ONL97770.1| DNA-directed RNA polymerase I subunit 1 [Zea mays]     356   e-110
ref|XP_021303065.1| DNA-directed RNA polymerase I subunit 1 [Sor...   362   e-109
gb|ONL97756.1| DNA-directed RNA polymerase I subunit 1, partial ...   356   e-107

>gb|ONK70128.1| uncharacterized protein A4U43_C05F30550 [Asparagus officinalis]
          Length = 595

 Score =  555 bits (1431), Expect = 0.0
 Identities = 279/418 (66%), Positives = 328/418 (78%), Gaps = 6/418 (1%)
 Frame = -1

Query: 1238 VKKITKPDLLDQKGMPVPDGLYDLTMGPFKDTDSCKSCGQLEYKCPGHCGHIELVKPVYN 1059
            VK+IT P+LLD KG+ VPDG YD  +GP  + DSCK+CGQL YKCPGHCGHIELVKPV+N
Sbjct: 30   VKRITSPELLDAKGLQVPDGFYDPALGPINEIDSCKTCGQLAYKCPGHCGHIELVKPVFN 89

Query: 1058 PLLFNNLKSLLNVVCFFCHKFRFGNDKVKQYTEILTHIARGDVLAAKGLEASAMHDVFFA 879
            PL FN+LKSLL++ CFFCH+FRF  +KV+ Y   LTHIA+GD+LAAK L++S+++D+ +A
Sbjct: 90   PLQFNSLKSLLHITCFFCHRFRFSTEKVQHYVAKLTHIAKGDILAAKDLDSSSVYDIIYA 149

Query: 878  EGSEGENDIKEKSATT--CELATDCKDAKKNTWTSLQYAEAISSISVMMKSRAK-CANCG 708
            E      D KEK+ T   CE   D K+AK N+WTSLQY EAIS+++++MK+R K CANCG
Sbjct: 150  E------DSKEKNITIHPCESGRDSKNAKDNSWTSLQYVEAISALNIIMKNRPKKCANCG 203

Query: 707  KNNPKISSPTFGWLCKTVKDSDIRANFIRESNVGLPSTXXXXXXXXXXXXASQSDEELST 528
            K+N KISSPTFGWL KTVK SDI ANFIRESNVGLPST             ++ D+   +
Sbjct: 204  KSNLKISSPTFGWLSKTVKHSDITANFIRESNVGLPSTGEEGPA-------NEGDDAPQS 256

Query: 527  D---SAPTNVSQQLRNLPPEVFERLYSSSGQKHLLPLEAELIFEGLWRNEPQLCSLICDI 357
            D   + PT VS Q RNL P+ F+ L +S+GQKHL+P E ELI +GLWRNE QLC LICDI
Sbjct: 257  DGKSAVPTYVSDQSRNLSPDFFKSLNASAGQKHLVPSEVELILDGLWRNEFQLCRLICDI 316

Query: 356  QQNKLNLSGNNKAYAMFFLKALLIPPSKFRPPAFAVRGVVEHPQNLLLSKVQEANIAFRE 177
            QQ  L +SGNNK YAMFFLKALL+PPSKFRPPAF+ RGVVEHPQNLLL KVQE NI  RE
Sbjct: 317  QQKDLKISGNNKWYAMFFLKALLVPPSKFRPPAFSGRGVVEHPQNLLLRKVQECNIVLRE 376

Query: 176  LITTDPDNPNIIRKWMDLQRSVTVLFDSSKGLAKSERETNGIRQLLEKKAGILRQKMM 3
            LI TDP+NP II +W  LQRSV+VLFDSSKGLAKSERETNGIRQLLEKKAGILRQKMM
Sbjct: 377  LIKTDPNNPKIIERWTQLQRSVSVLFDSSKGLAKSERETNGIRQLLEKKAGILRQKMM 434


>ref|XP_020265363.1| LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit 1
            [Asparagus officinalis]
          Length = 1630

 Score =  555 bits (1431), Expect = 0.0
 Identities = 279/418 (66%), Positives = 328/418 (78%), Gaps = 6/418 (1%)
 Frame = -1

Query: 1238 VKKITKPDLLDQKGMPVPDGLYDLTMGPFKDTDSCKSCGQLEYKCPGHCGHIELVKPVYN 1059
            VK+IT P+LLD KG+ VPDG YD  +GP  + DSCK+CGQL YKCPGHCGHIELVKPV+N
Sbjct: 30   VKRITSPELLDAKGLQVPDGFYDPALGPINEIDSCKTCGQLAYKCPGHCGHIELVKPVFN 89

Query: 1058 PLLFNNLKSLLNVVCFFCHKFRFGNDKVKQYTEILTHIARGDVLAAKGLEASAMHDVFFA 879
            PL FN+LKSLL++ CFFCH+FRF  +KV+ Y   LTHIA+GD+LAAK L++S+++D+ +A
Sbjct: 90   PLQFNSLKSLLHITCFFCHRFRFSTEKVQHYVAKLTHIAKGDILAAKDLDSSSVYDIIYA 149

Query: 878  EGSEGENDIKEKSATT--CELATDCKDAKKNTWTSLQYAEAISSISVMMKSRAK-CANCG 708
            E      D KEK+ T   CE   D K+AK N+WTSLQY EAIS+++++MK+R K CANCG
Sbjct: 150  E------DSKEKNITIHPCESGRDSKNAKDNSWTSLQYVEAISALNIIMKNRPKKCANCG 203

Query: 707  KNNPKISSPTFGWLCKTVKDSDIRANFIRESNVGLPSTXXXXXXXXXXXXASQSDEELST 528
            K+N KISSPTFGWL KTVK SDI ANFIRESNVGLPST             ++ D+   +
Sbjct: 204  KSNLKISSPTFGWLSKTVKHSDITANFIRESNVGLPSTGEEGPA-------NEGDDAPQS 256

Query: 527  D---SAPTNVSQQLRNLPPEVFERLYSSSGQKHLLPLEAELIFEGLWRNEPQLCSLICDI 357
            D   + PT VS Q RNL P+ F+ L +S+GQKHL+P E ELI +GLWRNE QLC LICDI
Sbjct: 257  DGKSAVPTYVSDQSRNLSPDFFKSLNASAGQKHLVPSEVELILDGLWRNEFQLCRLICDI 316

Query: 356  QQNKLNLSGNNKAYAMFFLKALLIPPSKFRPPAFAVRGVVEHPQNLLLSKVQEANIAFRE 177
            QQ  L +SGNNK YAMFFLKALL+PPSKFRPPAF+ RGVVEHPQNLLL KVQE NI  RE
Sbjct: 317  QQKDLKISGNNKWYAMFFLKALLVPPSKFRPPAFSGRGVVEHPQNLLLRKVQECNIVLRE 376

Query: 176  LITTDPDNPNIIRKWMDLQRSVTVLFDSSKGLAKSERETNGIRQLLEKKAGILRQKMM 3
            LI TDP+NP II +W  LQRSV+VLFDSSKGLAKSERETNGIRQLLEKKAGILRQKMM
Sbjct: 377  LIKTDPNNPKIIERWTQLQRSVSVLFDSSKGLAKSERETNGIRQLLEKKAGILRQKMM 434


>ref|XP_010922210.1| PREDICTED: DNA-directed RNA polymerase I subunit 1 [Elaeis
            guineensis]
          Length = 1674

 Score =  472 bits (1215), Expect = e-149
 Identities = 239/427 (55%), Positives = 309/427 (72%), Gaps = 15/427 (3%)
 Frame = -1

Query: 1238 VKKITKPDLLDQKGMPVPDGLYDLTMGPFKDTDSCKSCGQLEYKCPGHCGHIELVKPVYN 1059
            VKKITKPDLLD K  PVPDGLYD  MGP  DTDSCKSCGQL ++CPGHCGHI+L KP+YN
Sbjct: 32   VKKITKPDLLDSKNAPVPDGLYDPAMGPINDTDSCKSCGQLSFRCPGHCGHIDLAKPLYN 91

Query: 1058 PLLFNNLKSLLNVVCFFCHKFRFGNDKVKQYTEILTHIARGDVLAAKGLEASAMHDVFFA 879
            PLLF NL++LL + CFFC +FR   +KV++Y E L  IA+GDV+ A+ LEA +  + +F 
Sbjct: 92   PLLFRNLQNLLQITCFFCRRFRLNEEKVQRYAEQLDLIAKGDVVGARTLEAHSWGEYYFP 151

Query: 878  EGSEGENDIKEKSATTCELATDCKDAKKNTWTSLQYAEAISSISVMMKSRA-KCANCGKN 702
            +G E E+ +   + +  ++ T+ K  ++ TWTSLQY+EAIS +S  ++ ++ KCANCG+ 
Sbjct: 152  DGGETESAVISTNESLLKI-TNLK--QQQTWTSLQYSEAISIMSKFLREKSKKCANCGRK 208

Query: 701  NPKISSPTFGWLCKTVKDSDIRANFIRESNVGLPST--XXXXXXXXXXXXASQSDEELST 528
            NP I+SPTFGWL K ++ SDIR NFI   ++GL ST              ASQ+DEE S+
Sbjct: 209  NPTITSPTFGWLNKAMQASDIRTNFIIGYDLGLSSTEDQNAEGSQPRGDSASQTDEEPSS 268

Query: 527  DSAP-----------TNVSQQLRNLPPEVFERLYSSSGQKHLLPLEAELIFEGLWRNEPQ 381
             +                 +Q R+LPPE+ +++ SS  +KHLLP E E I + LW+N+ +
Sbjct: 269  TAKVEGKTKKQSRNLQKTKKQSRDLPPEIAKQILSSGQKKHLLPSEVEAILKDLWKNQAK 328

Query: 380  LCSLICDIQQNKLNLSGNNKAYAMFFLKALLIPPSKFRPPA-FAVRGVVEHPQNLLLSKV 204
            +C+LICD+Q+  LN SG +K YAMFFLK LL+PPSKFRPPA    RGV+EHPQN+LLSKV
Sbjct: 329  ICALICDLQRRSLNASGRDKGYAMFFLKTLLVPPSKFRPPAGSGTRGVLEHPQNVLLSKV 388

Query: 203  QEANIAFRELITTDPDNPNIIRKWMDLQRSVTVLFDSSKGLAKSERETNGIRQLLEKKAG 24
            QE+NIA R +IT  PD+P+I+R+WMDLQR+V VLFDS+KG  K+ERE NGIRQLLEKKAG
Sbjct: 389  QESNIALRNVITDGPDHPDIVRRWMDLQRNVNVLFDSTKGWVKTEREVNGIRQLLEKKAG 448

Query: 23   ILRQKMM 3
            ILRQKMM
Sbjct: 449  ILRQKMM 455


>ref|XP_008798769.1| PREDICTED: DNA-directed RNA polymerase I subunit 1 [Phoenix
            dactylifera]
          Length = 1665

 Score =  465 bits (1197), Expect = e-147
 Identities = 232/418 (55%), Positives = 296/418 (70%), Gaps = 6/418 (1%)
 Frame = -1

Query: 1238 VKKITKPDLLDQKGMPVPDGLYDLTMGPFKDTDSCKSCGQLEYKCPGHCGHIELVKPVYN 1059
            VKKITKPDLLD K   VPDGLYD  +GP  DTDSCKSCGQL ++CPGHCGHI+L +P+YN
Sbjct: 32   VKKITKPDLLDSKNASVPDGLYDPALGPINDTDSCKSCGQLSFRCPGHCGHIDLARPLYN 91

Query: 1058 PLLFNNLKSLLNVVCFFCHKFRFGNDKVKQYTEILTHIARGDVLAAKGLEASAMHDVFFA 879
            PLLF NL++LL + CFFC KFR   +KV++Y E L  IA+GD++ AK LEA +  + +F 
Sbjct: 92   PLLFRNLQNLLQITCFFCRKFRLNEEKVQRYAEQLCLIAKGDIVGAKTLEAHSWGEFYF- 150

Query: 878  EGSEGENDIKEKSATTCELATDCKDAK-KNTWTSLQYAEAISSISVMMKSRA-KCANCGK 705
                 E + K  +  T E  +   + K + TWTSLQ++EA+S +S  ++ ++ KCANC +
Sbjct: 151  ---PNEEETKSAAIHTSESLSKITNLKQQQTWTSLQHSEALSILSKFLREKSKKCANCSR 207

Query: 704  NNPKISSPTFGWLCKTVKDSDIRANFIRESNVGLPSTXXXXXXXXXXXXASQS---DEEL 534
             NP I+SPTFGWL K ++ SDIR+NFI ES++GL ST             S S   +E  
Sbjct: 208  KNPTITSPTFGWLNKAIQASDIRSNFIMESDLGLSSTEDQNTEGSQSRGDSASQLDEEPS 267

Query: 533  STDSAPTNVSQQLRNLPPEVFERLYSSSGQKHLLPLEAELIFEGLWRNEPQLCSLICDIQ 354
            S         +Q R+LPPE+ +++ SS  +KHLLP E E I + LW NE ++C+LICD+Q
Sbjct: 268  SITKVQRKTKKQSRDLPPEIAKQMLSSGQKKHLLPSEVEAILKDLWNNEAKICALICDVQ 327

Query: 353  QNKLNLSGNNKAYAMFFLKALLIPPSKFRPPA-FAVRGVVEHPQNLLLSKVQEANIAFRE 177
            +  LN  G +K YAMFFLK LL+PPSKFRPPA    RGV+EHPQN+LLSKVQE+NIA R 
Sbjct: 328  RRSLNRLGRDKGYAMFFLKTLLVPPSKFRPPAGSGTRGVLEHPQNVLLSKVQESNIALRN 387

Query: 176  LITTDPDNPNIIRKWMDLQRSVTVLFDSSKGLAKSERETNGIRQLLEKKAGILRQKMM 3
            +I   PD+P+I+R WMDLQR+V +LFDSSKG  K+ERE NGIRQLLEKKAGILRQKMM
Sbjct: 388  VIANGPDHPDIVRSWMDLQRNVNLLFDSSKGWVKTEREVNGIRQLLEKKAGILRQKMM 445


>gb|AIO05696.1| putative RNA polymerase AI large subunit, partial [Cocos nucifera]
          Length = 1669

 Score =  455 bits (1171), Expect = e-143
 Identities = 230/431 (53%), Positives = 303/431 (70%), Gaps = 19/431 (4%)
 Frame = -1

Query: 1238 VKKITKPDLLDQKGMPVPDGLYDLTMGPFKDTDSCKSCGQLEYKCPGHCGHIELVKPVYN 1059
            VKKITKP LLD K  PVPDGLYD  MGP  DTDSCKSCGQL ++CPGHCGHI+L K +YN
Sbjct: 32   VKKITKPGLLDSKNAPVPDGLYDPAMGPINDTDSCKSCGQLSFRCPGHCGHIDLAKQLYN 91

Query: 1058 PLLFNNLKSLLNVVCFFCHKFRFGNDKVKQYTEILTHIARGDVLAAKGLEASAMHDVFFA 879
            PLLF NL++LL + CFFCH+FR   +KV++Y + L  IA+GD++ A+ LEA +     F 
Sbjct: 92   PLLFRNLQNLLQITCFFCHRFRLNEEKVQRYAKQLDLIAKGDIVGARTLEARSWG---FP 148

Query: 878  EGSEGENDIKEKSATTCELATDCKDAKKNTWTSLQYAEAISSISVMMKSRA-KCANCGKN 702
            EG E ++ +   + +  ++ T+ K  ++ TWTSLQY+EA+S +S  ++ ++ KCANCG+ 
Sbjct: 149  EGEETKSAVISTNESLLKI-TNLK--QQQTWTSLQYSEALSIMSKFLREKSKKCANCGRK 205

Query: 701  NPKISSPTFGWLCKTVKDSDIRANFIRESNVGLPSTXXXXXXXXXXXXASQSDEELSTDS 522
            NP I+SPTFGWL K ++ SDIR NFI   ++GL ST             S+ D    TD 
Sbjct: 206  NPTITSPTFGWLNKAMQASDIRTNFIIGYDLGLSST----EDQNAEASQSRGDSASQTDE 261

Query: 521  APTNVS-----------------QQLRNLPPEVFERLYSSSGQKHLLPLEAELIFEGLWR 393
             P++++                 +Q  +LPPE+ +++ SS  +KHLLP E E I + LW+
Sbjct: 262  EPSSIAKVERKTKKQSRDLQKTKKQSMDLPPEIAKQMLSSGQKKHLLPSEVEAILKDLWK 321

Query: 392  NEPQLCSLICDIQQNKLNLSGNNKAYAMFFLKALLIPPSKFRPPA-FAVRGVVEHPQNLL 216
            N+ ++C+L+CD+Q   LN SG +K YAMFFLK LL+PPSKFRPPA    RGV+EHPQN+L
Sbjct: 322  NQAKICALMCDLQHRSLNASGRDKGYAMFFLKTLLVPPSKFRPPAGSGTRGVLEHPQNVL 381

Query: 215  LSKVQEANIAFRELITTDPDNPNIIRKWMDLQRSVTVLFDSSKGLAKSERETNGIRQLLE 36
            LSKVQE+NIA R +I   PD+P+I+R+WMDLQR+V VLFDS+KG  K+ERE NGIRQLLE
Sbjct: 382  LSKVQESNIALRNVIANGPDHPDIVRRWMDLQRNVNVLFDSTKGWVKTEREVNGIRQLLE 441

Query: 35   KKAGILRQKMM 3
            KKAGILRQKMM
Sbjct: 442  KKAGILRQKMM 452


>ref|XP_009394527.1| PREDICTED: DNA-directed RNA polymerase I subunit 1-like [Musa
            acuminata subsp. malaccensis]
          Length = 1641

 Score =  441 bits (1135), Expect = e-138
 Identities = 227/414 (54%), Positives = 284/414 (68%), Gaps = 2/414 (0%)
 Frame = -1

Query: 1238 VKKITKPDLLDQKGMPVPDGLYDLTMGPFKDTDSCKSCGQLEYKCPGHCGHIELVKPVYN 1059
            VKKITKPDLLD K  P+PDGLYD  +GP  D DSCKSCGQL  +CPGHCGHI+L KP+YN
Sbjct: 28   VKKITKPDLLDAKNSPIPDGLYDPALGPLNDNDSCKSCGQLSVRCPGHCGHIDLAKPLYN 87

Query: 1058 PLLFNNLKSLLNVVCFFCHKFRFGNDKVKQYTEILTHIARGDVLAAKGLEASAMHDVFFA 879
            PLLF  L+ LL + CFFCHKF+   +KVK+Y   L  I +GD+  A+ LEA+   ++FF 
Sbjct: 88   PLLFKTLQGLLQITCFFCHKFKINEEKVKRYVAQLDLIVKGDINGARSLEANTWSEIFFP 147

Query: 878  EGSEGENDIKEKSATTCELATDCKDAKKNTWTSLQYAEAISSISVMMKS-RAKCANCGKN 702
            E         E++A +     D  ++K  TWTSLQ +EA+S  S  M+  R KC NCGK 
Sbjct: 148  E---------EETAESITSNFDNANSKHLTWTSLQQSEALSIFSKFMRERRKKCDNCGKK 198

Query: 701  NPKISSPTFGWLCKTVKDSDIRANFIRESNVGLPSTXXXXXXXXXXXXASQSDEELSTDS 522
            NP I+SP FGWL KT ++SDIRANFI +S++   S+             S S  E+  +S
Sbjct: 199  NPTINSPIFGWLNKTTQESDIRANFILDSSLDQSSSEAKYSSITQSRGESAS--EMDEES 256

Query: 521  APTNVSQQLRNLPPEVFERLYSSSGQKHLLPLEAELIFEGLWRNEPQLCSLICDIQQNKL 342
              +    +L +LPPE  +++ SSSGQKHLLP E E I   LW+NE  LC LI DI    L
Sbjct: 257  PLSKKKVKLGDLPPEFIKQM-SSSGQKHLLPSEVEFILNNLWKNEANLCMLISDIHCKNL 315

Query: 341  NLSGNNKAYAMFFLKALLIPPSKFRPPA-FAVRGVVEHPQNLLLSKVQEANIAFRELITT 165
            ++S  NK +AMFFLK LLIPPSKFRP A  + RGV+EHPQN LLSKVQ+ANIA +  I  
Sbjct: 316  SISRGNKGFAMFFLKTLLIPPSKFRPAAGSSGRGVLEHPQNTLLSKVQQANIALKNCIVA 375

Query: 164  DPDNPNIIRKWMDLQRSVTVLFDSSKGLAKSERETNGIRQLLEKKAGILRQKMM 3
            +PD+P+I+R WMDLQ+ V VLFDS+KG AKS++E +GIRQLLEKK+GILRQKMM
Sbjct: 376  NPDHPDILRSWMDLQKCVNVLFDSTKGFAKSDKEASGIRQLLEKKSGILRQKMM 429


>ref|XP_020114580.1| DNA-directed RNA polymerase I subunit 1 [Ananas comosus]
 ref|XP_020114581.1| DNA-directed RNA polymerase I subunit 1 [Ananas comosus]
          Length = 1633

 Score =  440 bits (1131), Expect = e-137
 Identities = 225/414 (54%), Positives = 287/414 (69%), Gaps = 2/414 (0%)
 Frame = -1

Query: 1238 VKKITKPDLLDQKGMPVPDGLYDLTMGPFKDTDSCKSCGQLEYKCPGHCGHIELVKPVYN 1059
            VK+ITKPDLLD K +PV DGLYD  +GP  DTDSCK+CGQL  +CPGHCGHI+L +P+YN
Sbjct: 32   VKRITKPDLLDTKNVPVSDGLYDPALGPINDTDSCKTCGQLSVRCPGHCGHIDLARPIYN 91

Query: 1058 PLLFNNLKSLLNVVCFFCHKFRFGNDKVKQYTEILTHIARGDVLAAKGLEASAMHDVFFA 879
            PLLF +L++LL + CF CH F+  ++KV++YT  L  I  GD++ A+ LEA++ + +   
Sbjct: 92   PLLFKSLQTLLQITCFSCHNFKLDHEKVRRYTSQLKLILEGDIIGARNLEAASWNQL--- 148

Query: 878  EGSEGENDIKEKSATTCELATDCKDAKKNTWTSLQYAEAISSISVMMK-SRAKCANCGKN 702
              SE E      S+  C   +   + K+ TWTSLQY EA+S +S +M+  R KC NC   
Sbjct: 149  NSSENET----VSSADCTGESFSSNPKQRTWTSLQYTEALSVLSKLMREKRKKCNNCEAK 204

Query: 701  NPKISSPTFGWLCKTVKDSDIRANFIRESNVGLPSTXXXXXXXXXXXXASQSDEELSTDS 522
            NP I+SPTFGWL K V+ SD+RAN I  S +   ST              Q+DE  +   
Sbjct: 205  NPTITSPTFGWLNKIVRSSDVRANIIARSEIEQSST------------VEQNDE--ADTI 250

Query: 521  APTNVSQQLRNLPPEVFERLYSSSGQKHLLPLEAELIFEGLWRNEPQLCSLICDIQQNKL 342
            A     +Q R LP E+ +++  SSGQKHL P+EAE + E LW+NE +LC LICDIQQ  L
Sbjct: 251  ATKKAKRQTRRLPDELAKQML-SSGQKHLFPVEAENVLEALWKNEARLCMLICDIQQKSL 309

Query: 341  NLSGNNKAYAMFFLKALLIPPSKFRPPA-FAVRGVVEHPQNLLLSKVQEANIAFRELITT 165
             +    K Y MFFL+ALL+PPSKFRPPA  + RGV+EHPQN+LLSKVQE+NIA R LI  
Sbjct: 310  TVCRREKGYQMFFLRALLVPPSKFRPPAGSSTRGVLEHPQNVLLSKVQESNIALRNLIAL 369

Query: 164  DPDNPNIIRKWMDLQRSVTVLFDSSKGLAKSERETNGIRQLLEKKAGILRQKMM 3
            DP++P++ ++WMDLQRSV VLFDSSKG  KSE+ET+GIRQLLEKK GILRQKMM
Sbjct: 370  DPNHPDVSKRWMDLQRSVNVLFDSSKGSVKSEKETSGIRQLLEKKQGILRQKMM 423


>ref|XP_009407703.1| PREDICTED: DNA-directed RNA polymerase I subunit 1-like [Musa
            acuminata subsp. malaccensis]
          Length = 1640

 Score =  434 bits (1117), Expect = e-135
 Identities = 226/416 (54%), Positives = 279/416 (67%), Gaps = 4/416 (0%)
 Frame = -1

Query: 1238 VKKITKPDLLDQKGMPVPDGLYDLTMGPFKDTDSCKSCGQLEYKCPGHCGHIELVKPVYN 1059
            VKKITKPDLLD K  PVPDGLYD  +GP  DTDSCKSCGQL   CPGHCGHI+L +P+YN
Sbjct: 29   VKKITKPDLLDAKNSPVPDGLYDPALGPLNDTDSCKSCGQLSVCCPGHCGHIDLARPLYN 88

Query: 1058 PLLFNNLKSLLNVVCFFCHKFRFGNDKVKQYTEILTHIARGDVLAAKGLEASAMHDVFFA 879
            PLLF  L+ LL + CFFCHKF+   +KVK+Y  +L  I +GD+  A+ LEA++  ++FF 
Sbjct: 89   PLLFKTLQGLLQITCFFCHKFKINEEKVKRYVALLDLIVKGDINGARSLEANSWSEIFFP 148

Query: 878  EGSEGENDIKEKSATTCELATDCKDAKKNTWTSLQYAEAISSISVMMKS-RAKCANCGKN 702
            E    E+             ++   AK  TWTSLQ +EA+S +S  M+  R KC NCGK 
Sbjct: 149  EEGTAES----------VTPSNFDKAKHLTWTSLQQSEALSVLSKFMRERRKKCDNCGKK 198

Query: 701  NPKISSPTFGWLCKTVKDSDIRANFIRESNVGLPSTXXXXXXXXXXXXASQS--DEELST 528
            NP I SP FGWL KT + SDIRANFI +SN+ L S+             S S  DEE   
Sbjct: 199  NPTIHSPIFGWLNKTTQGSDIRANFIIDSNLDLSSSEAKYSSLTQSRGESASEMDEESPL 258

Query: 527  DSAPTNVSQQLRNLPPEVFERLYSSSGQKHLLPLEAELIFEGLWRNEPQLCSLICDIQQN 348
                    ++L +LPPE  +++ SSSGQKHLLP E ELI   LW+NE  LC LI  I   
Sbjct: 259  PQKKVKEDKELCDLPPEFIKQM-SSSGQKHLLPSEVELILNNLWKNEANLCMLISGIHCK 317

Query: 347  KLNLSGNNKAYAMFFLKALLIPPSKFRPPA-FAVRGVVEHPQNLLLSKVQEANIAFRELI 171
              ++S  NK  AMFFLK LL+PPSKFRP A  + RGV+EHPQN LLSKVQ+ANI  +  I
Sbjct: 318  SSSISRGNKGCAMFFLKTLLVPPSKFRPAARTSGRGVLEHPQNTLLSKVQQANIGLKNCI 377

Query: 170  TTDPDNPNIIRKWMDLQRSVTVLFDSSKGLAKSERETNGIRQLLEKKAGILRQKMM 3
              D D+P+I+R+WMDLQ++V VLFD +KG AKS++E +GIRQLLEKK+GILRQKMM
Sbjct: 378  IADLDHPDILRRWMDLQKTVNVLFDGTKGFAKSDKEASGIRQLLEKKSGILRQKMM 433


>gb|ACN85329.1| putative RNA polymerase A(I) large subunit, partial [Oryza
            brachyantha]
          Length = 1138

 Score =  377 bits (968), Expect = e-117
 Identities = 197/414 (47%), Positives = 263/414 (63%), Gaps = 2/414 (0%)
 Frame = -1

Query: 1238 VKKITKPDLLDQKGMPVPDGLYDLTMGPFKDTDSCKSCGQLEYKCPGHCGHIELVKPVYN 1059
            VK+ITKPD LD K  PVP GL D  MGP  DTD+CKSCGQ   +CPGH GHIEL KP++N
Sbjct: 31   VKQITKPDRLDAKNCPVPGGLLDPAMGPTSDTDTCKSCGQHSVRCPGHFGHIELAKPLFN 90

Query: 1058 PLLFNNLKSLLNVVCFFCHKFRFGNDKVKQYTEILTHIARGDVLAAKGLEASAMHDVFFA 879
            PLLF +LK+LL++ CF CHKFR   ++V +YT+ L  + +GD+  AK LE S    V   
Sbjct: 91   PLLFLSLKNLLHMTCFHCHKFRLNREQVDRYTDELELLVKGDIAHAKNLEDSG-GKVLLE 149

Query: 878  EGSEGENDIKEKSATTCELATDCKDAKKNTWTSLQYAEAISSISVMMKSR-AKCANCGKN 702
            E  + E    +KS         C +++  TWTS+Q  E +S  +  MK R  KC +C K 
Sbjct: 150  EDDKTEATSGDKST--------CSESENKTWTSIQLKEVLSIFANFMKKRQKKCTHCNKK 201

Query: 701  NPKISSPTFGWLCKTVKDSDIRANFIRESNVGLPSTXXXXXXXXXXXXASQSDEELSTDS 522
            NPKIS P +GWL K    S +RAN I ++ +    +             S  DEEL++  
Sbjct: 202  NPKISHPIYGWLIKDADISAVRANAIADAKL----SGDVRFHDSRETGVSGLDEELTSPG 257

Query: 521  APTNVS-QQLRNLPPEVFERLYSSSGQKHLLPLEAELIFEGLWRNEPQLCSLICDIQQNK 345
              +  S  + R +  +  + + +SSG+KHLL  E E I + LW+NE + C L+CD QQN 
Sbjct: 258  TSSRGSTNETRRISDDTIKEMVASSGKKHLLATEVESILKDLWKNEARFCMLLCDFQQNT 317

Query: 344  LNLSGNNKAYAMFFLKALLIPPSKFRPPAFAVRGVVEHPQNLLLSKVQEANIAFRELITT 165
            LN+S   + Y MFFLK LL+ P++FRP   +  G++EHPQN+LLSKVQEAN+A ++    
Sbjct: 318  LNVSEKKRGYEMFFLKNLLVAPNRFRPSIHSSLGIMEHPQNILLSKVQEANLALQQ-SNA 376

Query: 164  DPDNPNIIRKWMDLQRSVTVLFDSSKGLAKSERETNGIRQLLEKKAGILRQKMM 3
              ++  ++R+WMD+QRSV VL+DSSKGLAK+E+  NGIRQLLEKK GILRQKMM
Sbjct: 377  ASNHMEVLRRWMDMQRSVNVLYDSSKGLAKNEKNANGIRQLLEKKEGILRQKMM 430


>gb|ACN85301.1| putative RNA polymerase A(I) large subunit [Oryza coarctata]
          Length = 1830

 Score =  382 bits (982), Expect = e-116
 Identities = 204/414 (49%), Positives = 263/414 (63%), Gaps = 2/414 (0%)
 Frame = -1

Query: 1238 VKKITKPDLLDQKGMPVPDGLYDLTMGPFKDTDSCKSCGQLEYKCPGHCGHIELVKPVYN 1059
            VK+ITK D LD K  PVP GL D  MGP  DTD+CKSCGQ   +CPGH GHIEL KP++N
Sbjct: 31   VKQITKADRLDAKNCPVPGGLLDPAMGPTNDTDTCKSCGQHSVRCPGHFGHIELAKPLFN 90

Query: 1058 PLLFNNLKSLLNVVCFFCHKFRFGNDKVKQYTEILTHIARGDVLAAKGLEASAMHDVFFA 879
            PLLF +LK+LL+V CF CHKFR    +V +YT  L  + RGD+  AK LE S    VF A
Sbjct: 91   PLLFMSLKNLLHVTCFHCHKFRLNRGQVDRYTNELELLVRGDIALAKNLEDSG-GKVFLA 149

Query: 878  EGSEGENDIKEKSATTCELATDCKDAKKNTWTSLQYAEAISSISVMMKSR-AKCANCGKN 702
            E  E E    +K A        C + +  TWTS+Q  EA+S  + ++K R  KC +C K 
Sbjct: 150  EDDETEATSGDKLA--------CSEGENKTWTSIQLKEALSIFAKLLKKRQKKCVHCDKK 201

Query: 701  NPKISSPTFGWLCKTVKDSDIRANFIRESNVGLPSTXXXXXXXXXXXXASQSDEELSTDS 522
            NPKIS P +GWL K    S +RAN I ++ +   S              S  DEEL++  
Sbjct: 202  NPKISHPVYGWLIKDT-TSSVRANVIADAKLSGDS----RVHDSRETAVSGLDEELTSPG 256

Query: 521  APTNVS-QQLRNLPPEVFERLYSSSGQKHLLPLEAELIFEGLWRNEPQLCSLICDIQQNK 345
              +  S  + R +  +  + + +SSG+KHLL  E E I + LW+NE + C L+CD QQN 
Sbjct: 257  TSSRGSTNETRRISDDTIKEMVASSGKKHLLTTEVESILKNLWKNEARFCMLLCDFQQNT 316

Query: 344  LNLSGNNKAYAMFFLKALLIPPSKFRPPAFAVRGVVEHPQNLLLSKVQEANIAFRELITT 165
            LN+S   + Y MFFLK LL+ P++FRP   +  G++EHPQN+LL KVQEAN+A ++   T
Sbjct: 317  LNVSDKGRGYEMFFLKNLLVAPNRFRPSISSSLGIMEHPQNVLLGKVQEANLALQQ-SNT 375

Query: 164  DPDNPNIIRKWMDLQRSVTVLFDSSKGLAKSERETNGIRQLLEKKAGILRQKMM 3
              ++  ++R+WMDLQRSV VL+DSSKGLAKSE+  NGIRQLLEKK GILRQKMM
Sbjct: 376  SSNHMEVLRRWMDLQRSVNVLYDSSKGLAKSEKNANGIRQLLEKKEGILRQKMM 429


>gb|ACN85238.1| putative RNA polymerase A(I) large subunit, partial [Oryza minuta]
          Length = 563

 Score =  357 bits (917), Expect = e-115
 Identities = 195/422 (46%), Positives = 260/422 (61%), Gaps = 10/422 (2%)
 Frame = -1

Query: 1238 VKKITKPDLLDQKGMPVPDGLYDLTMGPFKDTDSCKSCGQLEYKCPGHCGHIELVKPVYN 1059
            VK+ITK D +D K  PVP GL D  MGP   TD+CKSCGQ   +CPGH GHIEL KP++N
Sbjct: 31   VKQITKSDCVDAKNCPVPGGLLDPAMGPTSVTDTCKSCGQQSIRCPGHFGHIELAKPLFN 90

Query: 1058 PLLFNNLKSLLNVVCFFCHKFRFGND--------KVKQYTEILTHIARGDVLAAKGLEAS 903
            PLLF +LK+LL+V CF CHKFR   +        +V +YT  L  + RGD+  AK LE  
Sbjct: 91   PLLFMSLKNLLHVTCFHCHKFRLNREQFSLSWSIQVDRYTNELELLVRGDIAHAKNLE-D 149

Query: 902  AMHDVFFAEGSEGENDIKEKSATTCELATDCKDAKKNTWTSLQYAEAISSISVMMKSR-A 726
                V   E  E E    +KSA +        + +  TWTS+Q  EA+S  + +MK +  
Sbjct: 150  LGGKVLSEEDDETEATSGDKSARS--------ERENKTWTSIQLKEALSIFAKLMKKKQK 201

Query: 725  KCANCGKNNPKISSPTFGWLCKTVKDSDIRANFIRESNVGLPSTXXXXXXXXXXXXASQS 546
            KCA+C K NP IS P +GWL K    S +RAN I  + +    +             S  
Sbjct: 202  KCAHCEKKNPIISHPIYGWLIKDTTSSSVRANAIANAKL----SGDGHVHDSRETGVSGL 257

Query: 545  DEELSTDSAPTNVS-QQLRNLPPEVFERLYSSSGQKHLLPLEAELIFEGLWRNEPQLCSL 369
            DEEL++    +  S  + R +  +  + + +SSG+KHLL  E E I + LW+ E + C L
Sbjct: 258  DEELTSPGTSSRRSTNETRRISDDTIKEMVASSGKKHLLTTEVESILKDLWKKEARFCML 317

Query: 368  ICDIQQNKLNLSGNNKAYAMFFLKALLIPPSKFRPPAFAVRGVVEHPQNLLLSKVQEANI 189
            +CD QQN LN+S   + Y MFFLK LL+ P++FR    +  G+VEHPQN+LLSKVQE+N+
Sbjct: 318  LCDFQQNTLNVSEKRRGYEMFFLKNLLVAPNRFRSSTSSGLGIVEHPQNVLLSKVQESNL 377

Query: 188  AFRELITTDPDNPNIIRKWMDLQRSVTVLFDSSKGLAKSERETNGIRQLLEKKAGILRQK 9
            A ++ I    ++ +++R+WMDLQRSV VL+DSSKGL+K+E+  NGIRQLLEKK GILRQK
Sbjct: 378  ALQQSIAAS-NHMDVLRRWMDLQRSVNVLYDSSKGLSKNEKNANGIRQLLEKKEGILRQK 436

Query: 8    MM 3
            MM
Sbjct: 437  MM 438


>gb|KQL11441.1| hypothetical protein SETIT_005673mg [Setaria italica]
          Length = 1667

 Score =  379 bits (974), Expect = e-115
 Identities = 201/413 (48%), Positives = 267/413 (64%), Gaps = 1/413 (0%)
 Frame = -1

Query: 1238 VKKITKPDLLDQKGMPVPDGLYDLTMGPFKDTDSCKSCGQLEYKCPGHCGHIELVKPVYN 1059
            VKKITK + LD K +PVP GL D  MGP  DTD+CKSCGQ   +CPGH GHIEL KP++N
Sbjct: 32   VKKITKSERLDAKNLPVPGGLLDPAMGPINDTDTCKSCGQHSVRCPGHFGHIELAKPLFN 91

Query: 1058 PLLFNNLKSLLNVVCFFCHKFRFGNDKVKQYTEILTHIARGDVLAAKGLEASAMHDVFFA 879
            PLLF +LK+LL+V CF CHKFR   ++V +Y   L  + +GDV  AK LE S       A
Sbjct: 92   PLLFTSLKNLLHVTCFHCHKFRLNKEQVDRYVNELELLVKGDVARAKNLEDSGKR----A 147

Query: 878  EGSEGENDIKEKSATTCELATDCKDAKKNTWTSLQYAEAISSISVMMKSR-AKCANCGKN 702
              SE + DI E  AT+C+  +  KD  K TWTS+Q  E +S  S +MK R  KCA C   
Sbjct: 148  SPSEEDEDITE--ATSCDKPSPEKD--KKTWTSVQLKEVLSIFSKIMKKRQKKCAKCDMK 203

Query: 701  NPKISSPTFGWLCKTVKDSDIRANFIRESNVGLPSTXXXXXXXXXXXXASQSDEELSTDS 522
            +P  SSP FGWL K    S +RAN I +  +                  S  DEE ++  
Sbjct: 204  SPTFSSPIFGWLVKDTSASAVRANAIADFKL----KGDGGAHSSGETGVSGFDEERTSPQ 259

Query: 521  APTNVSQQLRNLPPEVFERLYSSSGQKHLLPLEAELIFEGLWRNEPQLCSLICDIQQNKL 342
            +  +++ ++R+L  +  +   +SSG+KHLLP E E I +GLW+NE + C L+CD QQ+ L
Sbjct: 260  SKGSIN-EVRHLSDDTIKEFVASSGKKHLLPTEVESILKGLWKNEARFCMLLCDFQQDTL 318

Query: 341  NLSGNNKAYAMFFLKALLIPPSKFRPPAFAVRGVVEHPQNLLLSKVQEANIAFRELITTD 162
            ++S   K Y MFFL +LL+ P++FRP   +  G++EHPQN+LLSKVQEAN+A +   +  
Sbjct: 319  SVSEKRKGYEMFFLNSLLVAPNRFRPSTSSSLGIMEHPQNVLLSKVQEANLALQH-NSAS 377

Query: 161  PDNPNIIRKWMDLQRSVTVLFDSSKGLAKSERETNGIRQLLEKKAGILRQKMM 3
             ++ +++R+WMDLQRSV VL+DSSKG+ KSE+  +GIRQLLEKK GILRQKMM
Sbjct: 378  SNHMDVLRRWMDLQRSVNVLYDSSKGIVKSEKNAHGIRQLLEKKEGILRQKMM 430


>ref|XP_022681373.1| DNA-directed RNA polymerase I subunit 1 [Setaria italica]
          Length = 1754

 Score =  379 bits (974), Expect = e-115
 Identities = 201/413 (48%), Positives = 267/413 (64%), Gaps = 1/413 (0%)
 Frame = -1

Query: 1238 VKKITKPDLLDQKGMPVPDGLYDLTMGPFKDTDSCKSCGQLEYKCPGHCGHIELVKPVYN 1059
            VKKITK + LD K +PVP GL D  MGP  DTD+CKSCGQ   +CPGH GHIEL KP++N
Sbjct: 32   VKKITKSERLDAKNLPVPGGLLDPAMGPINDTDTCKSCGQHSVRCPGHFGHIELAKPLFN 91

Query: 1058 PLLFNNLKSLLNVVCFFCHKFRFGNDKVKQYTEILTHIARGDVLAAKGLEASAMHDVFFA 879
            PLLF +LK+LL+V CF CHKFR   ++V +Y   L  + +GDV  AK LE S       A
Sbjct: 92   PLLFTSLKNLLHVTCFHCHKFRLNKEQVDRYVNELELLVKGDVARAKNLEDSGKR----A 147

Query: 878  EGSEGENDIKEKSATTCELATDCKDAKKNTWTSLQYAEAISSISVMMKSR-AKCANCGKN 702
              SE + DI E  AT+C+  +  KD  K TWTS+Q  E +S  S +MK R  KCA C   
Sbjct: 148  SPSEEDEDITE--ATSCDKPSPEKD--KKTWTSVQLKEVLSIFSKIMKKRQKKCAKCDMK 203

Query: 701  NPKISSPTFGWLCKTVKDSDIRANFIRESNVGLPSTXXXXXXXXXXXXASQSDEELSTDS 522
            +P  SSP FGWL K    S +RAN I +  +                  S  DEE ++  
Sbjct: 204  SPTFSSPIFGWLVKDTSASAVRANAIADFKL----KGDGGAHSSGETGVSGFDEERTSPQ 259

Query: 521  APTNVSQQLRNLPPEVFERLYSSSGQKHLLPLEAELIFEGLWRNEPQLCSLICDIQQNKL 342
            +  +++ ++R+L  +  +   +SSG+KHLLP E E I +GLW+NE + C L+CD QQ+ L
Sbjct: 260  SKGSIN-EVRHLSDDTIKEFVASSGKKHLLPTEVESILKGLWKNEARFCMLLCDFQQDTL 318

Query: 341  NLSGNNKAYAMFFLKALLIPPSKFRPPAFAVRGVVEHPQNLLLSKVQEANIAFRELITTD 162
            ++S   K Y MFFL +LL+ P++FRP   +  G++EHPQN+LLSKVQEAN+A +   +  
Sbjct: 319  SVSEKRKGYEMFFLNSLLVAPNRFRPSTSSSLGIMEHPQNVLLSKVQEANLALQH-NSAS 377

Query: 161  PDNPNIIRKWMDLQRSVTVLFDSSKGLAKSERETNGIRQLLEKKAGILRQKMM 3
             ++ +++R+WMDLQRSV VL+DSSKG+ KSE+  +GIRQLLEKK GILRQKMM
Sbjct: 378  SNHMDVLRRWMDLQRSVNVLYDSSKGIVKSEKNAHGIRQLLEKKEGILRQKMM 430


>ref|XP_006656244.2| PREDICTED: DNA-directed RNA polymerase I subunit 1 [Oryza
            brachyantha]
          Length = 1756

 Score =  377 bits (968), Expect = e-114
 Identities = 197/414 (47%), Positives = 263/414 (63%), Gaps = 2/414 (0%)
 Frame = -1

Query: 1238 VKKITKPDLLDQKGMPVPDGLYDLTMGPFKDTDSCKSCGQLEYKCPGHCGHIELVKPVYN 1059
            VK+ITKPD LD K  PVP GL D  MGP  DTD+CKSCGQ   +CPGH GHIEL KP++N
Sbjct: 32   VKQITKPDRLDAKNCPVPGGLLDPAMGPTSDTDTCKSCGQHSVRCPGHFGHIELAKPLFN 91

Query: 1058 PLLFNNLKSLLNVVCFFCHKFRFGNDKVKQYTEILTHIARGDVLAAKGLEASAMHDVFFA 879
            PLLF +LK+LL++ CF CHKFR   ++V +YT+ L  + +GD+  AK LE S    V   
Sbjct: 92   PLLFLSLKNLLHMTCFHCHKFRLNREQVDRYTDELELLVKGDIAHAKNLEDSG-GKVLLE 150

Query: 878  EGSEGENDIKEKSATTCELATDCKDAKKNTWTSLQYAEAISSISVMMKSR-AKCANCGKN 702
            E  + E    +KS         C +++  TWTS+Q  E +S  +  MK R  KC +C K 
Sbjct: 151  EDDKTEATSGDKST--------CSESENKTWTSIQLKEVLSIFANFMKKRQKKCTHCNKK 202

Query: 701  NPKISSPTFGWLCKTVKDSDIRANFIRESNVGLPSTXXXXXXXXXXXXASQSDEELSTDS 522
            NPKIS P +GWL K    S +RAN I ++ +    +             S  DEEL++  
Sbjct: 203  NPKISHPIYGWLIKDADISAVRANAIADAKL----SGDVRFHDSRETGVSGLDEELTSPG 258

Query: 521  APTNVS-QQLRNLPPEVFERLYSSSGQKHLLPLEAELIFEGLWRNEPQLCSLICDIQQNK 345
              +  S  + R +  +  + + +SSG+KHLL  E E I + LW+NE + C L+CD QQN 
Sbjct: 259  TSSRGSTNETRRISDDTIKEMVASSGKKHLLATEVESILKDLWKNEARFCMLLCDFQQNT 318

Query: 344  LNLSGNNKAYAMFFLKALLIPPSKFRPPAFAVRGVVEHPQNLLLSKVQEANIAFRELITT 165
            LN+S   + Y MFFLK LL+ P++FRP   +  G++EHPQN+LLSKVQEAN+A ++    
Sbjct: 319  LNVSEKKRGYEMFFLKNLLVAPNRFRPSIHSSLGIMEHPQNILLSKVQEANLALQQ-SNA 377

Query: 164  DPDNPNIIRKWMDLQRSVTVLFDSSKGLAKSERETNGIRQLLEKKAGILRQKMM 3
              ++  ++R+WMD+QRSV VL+DSSKGLAK+E+  NGIRQLLEKK GILRQKMM
Sbjct: 378  ASNHMEVLRRWMDMQRSVNVLYDSSKGLAKNEKNANGIRQLLEKKEGILRQKMM 431


>gb|EEC80966.1| hypothetical protein OsI_23688 [Oryza sativa Indica Group]
          Length = 1350

 Score =  367 bits (941), Expect = e-112
 Identities = 195/414 (47%), Positives = 260/414 (62%), Gaps = 2/414 (0%)
 Frame = -1

Query: 1238 VKKITKPDLLDQKGMPVPDGLYDLTMGPFKDTDSCKSCGQLEYKCPGHCGHIELVKPVYN 1059
            VK+ITK D +D K  PVP GL D  MGP  DTD+CKSCGQ   +CPGH GHIEL KP++N
Sbjct: 125  VKQITKSDRVDAKNCPVPGGLLDPAMGPTNDTDTCKSCGQQSIRCPGHFGHIELAKPLFN 184

Query: 1058 PLLFNNLKSLLNVVCFFCHKFRFGNDKVKQYTEILTHIARGDVLAAKGLEASAMHDVFFA 879
            PLLF +LK+LL V CF CHKFR   ++V +YT  L  + RGD+  AK LE      V   
Sbjct: 185  PLLFMSLKNLLQVTCFHCHKFRLNKEQVDRYTNELELLVRGDIAHAKNLE-DLGGKVLSK 243

Query: 878  EGSEGENDIKEKSATTCELATDCKDAKKNTWTSLQYAEAISSISVMMKSR-AKCANCGKN 702
            E  E E    +KSA +        + +  TWTS+Q  EA+S  S +MK R  KCA+C K 
Sbjct: 244  EDDETEATSGDKSARS--------ERENKTWTSIQLKEALSIFSKLMKKRQKKCAHCEKK 295

Query: 701  NPKISSPTFGWLCKTVKDSDIRANFIRESNVGLPSTXXXXXXXXXXXXASQSDEELSTDS 522
            NP I +P +GWL K    S +RAN I  + +    +             S  DEEL++  
Sbjct: 296  NPIIKNPIYGWLIKDTTSSSVRANAIANAKL----SGDGHVNDSRETGVSGLDEELTSPG 351

Query: 521  APTNVS-QQLRNLPPEVFERLYSSSGQKHLLPLEAELIFEGLWRNEPQLCSLICDIQQNK 345
              +  S  + R +  +  + + +SSG+KHLL  E E I + LW+ E + C L+CD QQN 
Sbjct: 352  TLSRRSTNETRRISDDTIKEMVASSGKKHLLTTEVESILKDLWKKEARFCMLLCDFQQNT 411

Query: 344  LNLSGNNKAYAMFFLKALLIPPSKFRPPAFAVRGVVEHPQNLLLSKVQEANIAFRELITT 165
            L++S   + Y MFFLK LL+ P++FRP   +  G++EHPQN+LLSKVQE+N+A ++ I  
Sbjct: 412  LSVSEKRRGYEMFFLKNLLVAPNRFRPSISSSLGIMEHPQNVLLSKVQESNLALQQSIAA 471

Query: 164  DPDNPNIIRKWMDLQRSVTVLFDSSKGLAKSERETNGIRQLLEKKAGILRQKMM 3
              ++  ++R+WMDLQR+V VL+DSSKGL+K+E+  NGIRQLLEKK GILRQKMM
Sbjct: 472  S-NHMEVLRRWMDLQRNVNVLYDSSKGLSKNEKNANGIRQLLEKKEGILRQKMM 524


>ref|XP_015643540.1| PREDICTED: DNA-directed RNA polymerase I subunit 1 [Oryza sativa
            Japonica Group]
          Length = 1741

 Score =  365 bits (937), Expect = e-110
 Identities = 194/414 (46%), Positives = 259/414 (62%), Gaps = 2/414 (0%)
 Frame = -1

Query: 1238 VKKITKPDLLDQKGMPVPDGLYDLTMGPFKDTDSCKSCGQLEYKCPGHCGHIELVKPVYN 1059
            VK+ITK D +D K  PVP GL D  MGP  DTD+CKSCGQ   +CPGH GHIEL KP++N
Sbjct: 32   VKQITKSDRVDAKNCPVPGGLLDPAMGPTNDTDTCKSCGQQSIRCPGHFGHIELAKPLFN 91

Query: 1058 PLLFNNLKSLLNVVCFFCHKFRFGNDKVKQYTEILTHIARGDVLAAKGLEASAMHDVFFA 879
            PLLF +LK+LL V CF CHKFR   ++  +YT  L  + RGD+  AK LE      V   
Sbjct: 92   PLLFMSLKNLLQVTCFHCHKFRLNKEQADRYTNELELLVRGDIAHAKNLE-DLGGKVLSK 150

Query: 878  EGSEGENDIKEKSATTCELATDCKDAKKNTWTSLQYAEAISSISVMMKSR-AKCANCGKN 702
            E  E E    +KSA +        + +  TWTS+Q  EA+S  S +MK R  KCA+C K 
Sbjct: 151  EDDETEATSGDKSARS--------ERENKTWTSIQLKEALSIFSKLMKKRQKKCAHCEKK 202

Query: 701  NPKISSPTFGWLCKTVKDSDIRANFIRESNVGLPSTXXXXXXXXXXXXASQSDEELSTDS 522
            NP I +P +GWL K    S +RAN I  + +    +             S  DEEL++  
Sbjct: 203  NPIIKNPIYGWLIKDTTSSSVRANAIANAKL----SGDGHVNDSRETGVSGLDEELTSPG 258

Query: 521  APTNVS-QQLRNLPPEVFERLYSSSGQKHLLPLEAELIFEGLWRNEPQLCSLICDIQQNK 345
              +  S  + R +  +  + + +SSG+KHLL  E E I + LW+ E + C L+CD QQN 
Sbjct: 259  TLSRRSTNETRRISDDTIKEMVASSGKKHLLTTEVESILKDLWKKEARFCMLLCDFQQNT 318

Query: 344  LNLSGNNKAYAMFFLKALLIPPSKFRPPAFAVRGVVEHPQNLLLSKVQEANIAFRELITT 165
            L++S   + Y MFFLK LL+ P++FRP   +  G++EHPQN+LLSKVQE+N+A ++ I  
Sbjct: 319  LSVSEKRRGYEMFFLKNLLVAPNRFRPSISSSLGIMEHPQNVLLSKVQESNLALQQSIAA 378

Query: 164  DPDNPNIIRKWMDLQRSVTVLFDSSKGLAKSERETNGIRQLLEKKAGILRQKMM 3
              ++  ++R+WMDLQR+V VL+DSSKGL+K+E+  NGIRQLLEKK GILRQKMM
Sbjct: 379  S-NHMEVLRRWMDLQRNVNVLYDSSKGLSKNEKNANGIRQLLEKKEGILRQKMM 431


>gb|ONL97757.1| DNA-directed RNA polymerase I subunit 1 [Zea mays]
          Length = 1032

 Score =  356 bits (914), Expect = e-110
 Identities = 189/414 (45%), Positives = 260/414 (62%), Gaps = 2/414 (0%)
 Frame = -1

Query: 1238 VKKITKPDLLDQKGMPVPDGLYDLTMGPFKDTDSCKSCGQLEYKCPGHCGHIELVKPVYN 1059
            +KKITK + LD K +PVP GL D  MGP  D D CKSCGQ   +CPGH GHIEL KP++N
Sbjct: 32   IKKITKSERLDAKNLPVPGGLLDPAMGPINDIDICKSCGQHSVRCPGHFGHIELAKPLFN 91

Query: 1058 PLLFNNLKSLLNVVCFFCHKFRFGNDKVKQYTEILTHIARGDVLAAKGLEASAMHDVFFA 879
            PLLF +LK+LL+V CF CHKFR   ++V +Y   L  + +GD++ AK LE S + + + +
Sbjct: 92   PLLFMSLKNLLHVTCFHCHKFRLNKEQVDRYVNELELLVKGDIVCAKNLEDS-VEEAYLS 150

Query: 878  EGSEGENDIKEKSATTCELATDCKDAKKNTWTSLQYAEAISSISVMMKSR-AKCANCGKN 702
            +  E  N       T+ + ++  KD  K TWTS+Q  E +S  S +MK R  KCA C   
Sbjct: 151  KEDENMN-----KTTSGDNSSSVKD--KKTWTSIQLKEVLSIFSKIMKKRQKKCAKCDMK 203

Query: 701  NPKISSPTFGWLCKTVKDSDIRANFIRESNVGLPSTXXXXXXXXXXXXASQSDEELSTDS 522
            +P ISSP FGWL K  K S +R N I +  +                  S  +EE S+  
Sbjct: 204  SPTISSPIFGWLVKDTKASAVRTNAIADFKL----KGDGDIHNSGETGVSGLEEESSSPG 259

Query: 521  APTNVS-QQLRNLPPEVFERLYSSSGQKHLLPLEAELIFEGLWRNEPQLCSLICDIQQNK 345
              +  S  ++R L  +  + L +SSG+KHLLP E E I + LW+NE + C L+CD Q+N 
Sbjct: 260  MVSKDSINEVRGLSDDTIKELVASSGKKHLLPTEVESILKDLWKNEARFCMLLCDFQKNM 319

Query: 344  LNLSGNNKAYAMFFLKALLIPPSKFRPPAFAVRGVVEHPQNLLLSKVQEANIAFRELITT 165
             +     + Y MFFL +LL+ P++FRP   +  G++EHPQ++LLSKVQE+N+A +     
Sbjct: 320  SSEPEKRRGYEMFFLSSLLVAPNRFRPSTSSSLGIMEHPQSVLLSKVQESNLALQH-NNA 378

Query: 164  DPDNPNIIRKWMDLQRSVTVLFDSSKGLAKSERETNGIRQLLEKKAGILRQKMM 3
              ++ +++++WMDLQRSV VL+DSSKGLA+SE+  +GIRQLLEKK GILRQKMM
Sbjct: 379  SSNHMDVLQRWMDLQRSVNVLYDSSKGLARSEKNAHGIRQLLEKKEGILRQKMM 432


>gb|ONL97770.1| DNA-directed RNA polymerase I subunit 1 [Zea mays]
          Length = 1065

 Score =  356 bits (914), Expect = e-110
 Identities = 189/414 (45%), Positives = 260/414 (62%), Gaps = 2/414 (0%)
 Frame = -1

Query: 1238 VKKITKPDLLDQKGMPVPDGLYDLTMGPFKDTDSCKSCGQLEYKCPGHCGHIELVKPVYN 1059
            +KKITK + LD K +PVP GL D  MGP  D D CKSCGQ   +CPGH GHIEL KP++N
Sbjct: 32   IKKITKSERLDAKNLPVPGGLLDPAMGPINDIDICKSCGQHSVRCPGHFGHIELAKPLFN 91

Query: 1058 PLLFNNLKSLLNVVCFFCHKFRFGNDKVKQYTEILTHIARGDVLAAKGLEASAMHDVFFA 879
            PLLF +LK+LL+V CF CHKFR   ++V +Y   L  + +GD++ AK LE S + + + +
Sbjct: 92   PLLFMSLKNLLHVTCFHCHKFRLNKEQVDRYVNELELLVKGDIVCAKNLEDS-VEEAYLS 150

Query: 878  EGSEGENDIKEKSATTCELATDCKDAKKNTWTSLQYAEAISSISVMMKSR-AKCANCGKN 702
            +  E  N       T+ + ++  KD  K TWTS+Q  E +S  S +MK R  KCA C   
Sbjct: 151  KEDENMN-----KTTSGDNSSSVKD--KKTWTSIQLKEVLSIFSKIMKKRQKKCAKCDMK 203

Query: 701  NPKISSPTFGWLCKTVKDSDIRANFIRESNVGLPSTXXXXXXXXXXXXASQSDEELSTDS 522
            +P ISSP FGWL K  K S +R N I +  +                  S  +EE S+  
Sbjct: 204  SPTISSPIFGWLVKDTKASAVRTNAIADFKL----KGDGDIHNSGETGVSGLEEESSSPG 259

Query: 521  APTNVS-QQLRNLPPEVFERLYSSSGQKHLLPLEAELIFEGLWRNEPQLCSLICDIQQNK 345
              +  S  ++R L  +  + L +SSG+KHLLP E E I + LW+NE + C L+CD Q+N 
Sbjct: 260  MVSKDSINEVRGLSDDTIKELVASSGKKHLLPTEVESILKDLWKNEARFCMLLCDFQKNM 319

Query: 344  LNLSGNNKAYAMFFLKALLIPPSKFRPPAFAVRGVVEHPQNLLLSKVQEANIAFRELITT 165
             +     + Y MFFL +LL+ P++FRP   +  G++EHPQ++LLSKVQE+N+A +     
Sbjct: 320  SSEPEKRRGYEMFFLSSLLVAPNRFRPSTSSSLGIMEHPQSVLLSKVQESNLALQH-NNA 378

Query: 164  DPDNPNIIRKWMDLQRSVTVLFDSSKGLAKSERETNGIRQLLEKKAGILRQKMM 3
              ++ +++++WMDLQRSV VL+DSSKGLA+SE+  +GIRQLLEKK GILRQKMM
Sbjct: 379  SSNHMDVLQRWMDLQRSVNVLYDSSKGLARSEKNAHGIRQLLEKKEGILRQKMM 432


>ref|XP_021303065.1| DNA-directed RNA polymerase I subunit 1 [Sorghum bicolor]
 gb|KXG22455.1| hypothetical protein SORBI_3009G217200 [Sorghum bicolor]
          Length = 1732

 Score =  362 bits (928), Expect = e-109
 Identities = 195/414 (47%), Positives = 262/414 (63%), Gaps = 2/414 (0%)
 Frame = -1

Query: 1238 VKKITKPDLLDQKGMPVPDGLYDLTMGPFKDTDSCKSCGQLEYKCPGHCGHIELVKPVYN 1059
            +KKITK + LD K +PVP GL D  MGP  DTD+CKSCGQ   +CPGH GHIEL KP++N
Sbjct: 32   IKKITKLERLDAKNLPVPGGLLDPAMGPINDTDTCKSCGQNSVRCPGHFGHIELAKPLFN 91

Query: 1058 PLLFNNLKSLLNVVCFFCHKFRFGNDKVKQYTEILTHIARGDVLAAKGLEASAMHDVFFA 879
            PLLF +L++LL+V CF+CHKFR   ++V +Y   L  + +GD++ AK LE S       A
Sbjct: 92   PLLFMSLRNLLHVTCFYCHKFRLNKEQVDRYVNELELLVKGDIVGAKNLEDSVKE----A 147

Query: 878  EGSEGENDIKEKSATTCELATDCKDAKKNTWTSLQYAEAISSISVMMKSR-AKCANCGKN 702
              SE + +I E   T+ + ++  KD K  TWTS+Q  E +S  S +MK R  KCA C   
Sbjct: 148  YLSEEDENITE--TTSGDKSSSVKDNK--TWTSVQLKEVLSIFSKIMKKRQTKCAKCDMK 203

Query: 701  NPKISSPTFGWLCKTVKDSDIRANFIRESNVGLPSTXXXXXXXXXXXXASQSDEELSTDS 522
            +P ISSP FGWL K    S +RAN I +  +                  S  DEE ++  
Sbjct: 204  SPTISSPIFGWLVKDTSASAVRANAIADFKL----KGDGDAHNSGDTGVSGLDEETTSPG 259

Query: 521  APTNVS-QQLRNLPPEVFERLYSSSGQKHLLPLEAELIFEGLWRNEPQLCSLICDIQQNK 345
              +  S  ++R L  +  + + +SSG+KHLLP E E I + LW NE + C L+CD Q+N 
Sbjct: 260  MVSKGSINEVRRLSDDAVKEMVASSGKKHLLPTEVESILKDLWNNEARFCMLLCDFQKNT 319

Query: 344  LNLSGNNKAYAMFFLKALLIPPSKFRPPAFAVRGVVEHPQNLLLSKVQEANIAFRELITT 165
            L+     + Y MFFL +LL+ P++FRP   +  G++EHPQ++LLSKVQEAN+A +     
Sbjct: 320  LSEPEKRRGYEMFFLNSLLVAPNRFRPSTNSSLGMMEHPQSVLLSKVQEANLALQH-HNA 378

Query: 164  DPDNPNIIRKWMDLQRSVTVLFDSSKGLAKSERETNGIRQLLEKKAGILRQKMM 3
              ++ ++IR+WMDLQRSV VL+DSSKGL KSE+  +GIRQLLEKK GILRQKMM
Sbjct: 379  SSNHMDVIRRWMDLQRSVNVLYDSSKGLVKSEKNAHGIRQLLEKKEGILRQKMM 432


>gb|ONL97756.1| DNA-directed RNA polymerase I subunit 1, partial [Zea mays]
          Length = 1475

 Score =  356 bits (914), Expect = e-107
 Identities = 189/414 (45%), Positives = 260/414 (62%), Gaps = 2/414 (0%)
 Frame = -1

Query: 1238 VKKITKPDLLDQKGMPVPDGLYDLTMGPFKDTDSCKSCGQLEYKCPGHCGHIELVKPVYN 1059
            +KKITK + LD K +PVP GL D  MGP  D D CKSCGQ   +CPGH GHIEL KP++N
Sbjct: 32   IKKITKSERLDAKNLPVPGGLLDPAMGPINDIDICKSCGQHSVRCPGHFGHIELAKPLFN 91

Query: 1058 PLLFNNLKSLLNVVCFFCHKFRFGNDKVKQYTEILTHIARGDVLAAKGLEASAMHDVFFA 879
            PLLF +LK+LL+V CF CHKFR   ++V +Y   L  + +GD++ AK LE S + + + +
Sbjct: 92   PLLFMSLKNLLHVTCFHCHKFRLNKEQVDRYVNELELLVKGDIVCAKNLEDS-VEEAYLS 150

Query: 878  EGSEGENDIKEKSATTCELATDCKDAKKNTWTSLQYAEAISSISVMMKSR-AKCANCGKN 702
            +  E  N       T+ + ++  KD  K TWTS+Q  E +S  S +MK R  KCA C   
Sbjct: 151  KEDENMN-----KTTSGDNSSSVKD--KKTWTSIQLKEVLSIFSKIMKKRQKKCAKCDMK 203

Query: 701  NPKISSPTFGWLCKTVKDSDIRANFIRESNVGLPSTXXXXXXXXXXXXASQSDEELSTDS 522
            +P ISSP FGWL K  K S +R N I +  +                  S  +EE S+  
Sbjct: 204  SPTISSPIFGWLVKDTKASAVRTNAIADFKL----KGDGDIHNSGETGVSGLEEESSSPG 259

Query: 521  APTNVS-QQLRNLPPEVFERLYSSSGQKHLLPLEAELIFEGLWRNEPQLCSLICDIQQNK 345
              +  S  ++R L  +  + L +SSG+KHLLP E E I + LW+NE + C L+CD Q+N 
Sbjct: 260  MVSKDSINEVRGLSDDTIKELVASSGKKHLLPTEVESILKDLWKNEARFCMLLCDFQKNM 319

Query: 344  LNLSGNNKAYAMFFLKALLIPPSKFRPPAFAVRGVVEHPQNLLLSKVQEANIAFRELITT 165
             +     + Y MFFL +LL+ P++FRP   +  G++EHPQ++LLSKVQE+N+A +     
Sbjct: 320  SSEPEKRRGYEMFFLSSLLVAPNRFRPSTSSSLGIMEHPQSVLLSKVQESNLALQH-NNA 378

Query: 164  DPDNPNIIRKWMDLQRSVTVLFDSSKGLAKSERETNGIRQLLEKKAGILRQKMM 3
              ++ +++++WMDLQRSV VL+DSSKGLA+SE+  +GIRQLLEKK GILRQKMM
Sbjct: 379  SSNHMDVLQRWMDLQRSVNVLYDSSKGLARSEKNAHGIRQLLEKKEGILRQKMM 432