BLASTX nr result
ID: Ophiopogon25_contig00004947
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon25_contig00004947
(600 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020256035.1| replication factor C subunit 3 [Asparagus of... 171 1e-48
ref|XP_010932332.1| PREDICTED: replication factor C subunit 3 [E... 166 2e-47
ref|XP_008812391.1| PREDICTED: replication factor C subunit 3 [P... 166 7e-47
gb|PIA59865.1| hypothetical protein AQUCO_00400616v1 [Aquilegia ... 166 1e-46
gb|KVI09483.1| AAA+ ATPase domain-containing protein [Cynara car... 165 2e-46
gb|ADE77654.1| unknown [Picea sitchensis] 165 3e-46
ref|XP_010910653.2| PREDICTED: replication factor C subunit 3 [E... 166 3e-46
ref|XP_022005930.1| replication factor C subunit 3-like [Heliant... 164 4e-46
ref|XP_010266717.1| PREDICTED: replication factor C subunit 3 is... 164 4e-46
gb|PKU72143.1| hypothetical protein MA16_Dca006736 [Dendrobium c... 163 2e-45
ref|XP_021973280.1| replication factor C subunit 3 [Helianthus a... 163 2e-45
ref|XP_009399325.1| PREDICTED: replication factor C subunit 5 [M... 163 2e-45
ref|XP_002263213.1| PREDICTED: replication factor C subunit 3 [V... 163 2e-45
ref|XP_020239031.1| replication factor C subunit 3 [Cajanus caja... 162 2e-45
ref|XP_023543490.1| replication factor C subunit 3 [Cucurbita pe... 159 2e-45
ref|XP_023929241.1| replication factor C subunit 3 [Quercus sube... 162 3e-45
ref|XP_020682194.1| replication factor C subunit 3 [Dendrobium c... 163 4e-45
ref|XP_023751388.1| replication factor C subunit 3 [Lactuca sati... 162 4e-45
ref|XP_021866052.1| replication factor C subunit 3 [Spinacia ole... 162 4e-45
ref|XP_018833420.1| PREDICTED: replication factor C subunit 3 [J... 162 4e-45
>ref|XP_020256035.1| replication factor C subunit 3 [Asparagus officinalis]
gb|ONK74293.1| uncharacterized protein A4U43_C03F4760 [Asparagus officinalis]
Length = 354
Score = 171 bits (433), Expect = 1e-48
Identities = 85/104 (81%), Positives = 86/104 (82%)
Frame = -1
Query: 600 LDWEQYVSEIASDIINEQSPKRLFLVRGKLYELLVNCIPPQIIXXXXXXXXXXXXXXXXK 421
LDWEQYVSEIASDIINEQSPKRLFLVRGKLYELLVNCIPPQII K
Sbjct: 251 LDWEQYVSEIASDIINEQSPKRLFLVRGKLYELLVNCIPPQIILKKLLSELLKKLDSELK 310
Query: 420 HEVCHWAAYYEHRMRLGQKAIFHIEGFVAKFMSIYKGFLIATFG 289
HE+CHWAAYYEHRM LGQKAIFHIE FVAKFMSIYKGFLIATFG
Sbjct: 311 HEICHWAAYYEHRMCLGQKAIFHIEAFVAKFMSIYKGFLIATFG 354
>ref|XP_010932332.1| PREDICTED: replication factor C subunit 3 [Elaeis guineensis]
Length = 302
Score = 166 bits (421), Expect = 2e-47
Identities = 82/103 (79%), Positives = 85/103 (82%)
Frame = -1
Query: 600 LDWEQYVSEIASDIINEQSPKRLFLVRGKLYELLVNCIPPQIIXXXXXXXXXXXXXXXXK 421
+DWEQYVSEIASDII EQSPKRLFLVRGK+YELLVNCIPP+II K
Sbjct: 199 MDWEQYVSEIASDIIMEQSPKRLFLVRGKIYELLVNCIPPEIILKKLLSELLKKLDSELK 258
Query: 420 HEVCHWAAYYEHRMRLGQKAIFHIEGFVAKFMSIYKGFLIATF 292
HEVCHWAAYYEHRMRLGQKAIFHIE FVAKFMSIYKGFLIATF
Sbjct: 259 HEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKGFLIATF 301
>ref|XP_008812391.1| PREDICTED: replication factor C subunit 3 [Phoenix dactylifera]
Length = 354
Score = 166 bits (421), Expect = 7e-47
Identities = 82/103 (79%), Positives = 85/103 (82%)
Frame = -1
Query: 600 LDWEQYVSEIASDIINEQSPKRLFLVRGKLYELLVNCIPPQIIXXXXXXXXXXXXXXXXK 421
+DWEQYVSEIASDII EQSPKRLF+VRGKLYELLVNCIPP+II K
Sbjct: 251 MDWEQYVSEIASDIIMEQSPKRLFMVRGKLYELLVNCIPPEIILKKLLSELLKKLDSELK 310
Query: 420 HEVCHWAAYYEHRMRLGQKAIFHIEGFVAKFMSIYKGFLIATF 292
HEVCHWAAYYEHRMRLGQKAIFHIE FVAKFMSIYKGFLIATF
Sbjct: 311 HEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKGFLIATF 353
>gb|PIA59865.1| hypothetical protein AQUCO_00400616v1 [Aquilegia coerulea]
Length = 354
Score = 166 bits (419), Expect = 1e-46
Identities = 80/104 (76%), Positives = 85/104 (81%)
Frame = -1
Query: 600 LDWEQYVSEIASDIINEQSPKRLFLVRGKLYELLVNCIPPQIIXXXXXXXXXXXXXXXXK 421
+DWEQYVSEIASDI+ EQSPKRLF+VRGKLYELL+NCIPP+II K
Sbjct: 251 MDWEQYVSEIASDIMQEQSPKRLFMVRGKLYELLINCIPPEIILKRLLSELLKKLDAELK 310
Query: 420 HEVCHWAAYYEHRMRLGQKAIFHIEGFVAKFMSIYKGFLIATFG 289
HEVCHWAAYYEHRMRLGQKAIFHIE FVAKFMSIYK FLIATFG
Sbjct: 311 HEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKAFLIATFG 354
>gb|KVI09483.1| AAA+ ATPase domain-containing protein [Cynara cardunculus var.
scolymus]
Length = 354
Score = 165 bits (418), Expect = 2e-46
Identities = 80/104 (76%), Positives = 85/104 (81%)
Frame = -1
Query: 600 LDWEQYVSEIASDIINEQSPKRLFLVRGKLYELLVNCIPPQIIXXXXXXXXXXXXXXXXK 421
+DWE+YVSEIASDI+ EQSPKRLF VRGKLYELLVNCIPP++I K
Sbjct: 251 MDWEEYVSEIASDIMKEQSPKRLFQVRGKLYELLVNCIPPEVILKRLLYELLKKLDSELK 310
Query: 420 HEVCHWAAYYEHRMRLGQKAIFHIEGFVAKFMSIYKGFLIATFG 289
HEVCHWAAYYEHRMRLGQKAIFHIE FVAKFMSIYKGFLIATFG
Sbjct: 311 HEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKGFLIATFG 354
>gb|ADE77654.1| unknown [Picea sitchensis]
Length = 354
Score = 165 bits (417), Expect = 3e-46
Identities = 76/104 (73%), Positives = 86/104 (82%)
Frame = -1
Query: 600 LDWEQYVSEIASDIINEQSPKRLFLVRGKLYELLVNCIPPQIIXXXXXXXXXXXXXXXXK 421
LDWEQY+SEIASDI+NEQSPKRL++VRGK+YELLVNCIPP+++ K
Sbjct: 251 LDWEQYISEIASDIVNEQSPKRLYMVRGKIYELLVNCIPPEVVLKRLLFELMKKLDSELK 310
Query: 420 HEVCHWAAYYEHRMRLGQKAIFHIEGFVAKFMSIYKGFLIATFG 289
HEVCHWAAYYEHRMRLGQKAIFH+E F+AKFMSIYK FLIATFG
Sbjct: 311 HEVCHWAAYYEHRMRLGQKAIFHLEAFIAKFMSIYKKFLIATFG 354
>ref|XP_010910653.2| PREDICTED: replication factor C subunit 3 [Elaeis guineensis]
Length = 419
Score = 166 bits (421), Expect = 3e-46
Identities = 82/103 (79%), Positives = 85/103 (82%)
Frame = -1
Query: 600 LDWEQYVSEIASDIINEQSPKRLFLVRGKLYELLVNCIPPQIIXXXXXXXXXXXXXXXXK 421
+DWEQYVSEIASDII EQSPKRLFLVRGK+YELLVNCIPP+II K
Sbjct: 316 MDWEQYVSEIASDIIMEQSPKRLFLVRGKIYELLVNCIPPEIILKKLLSELLKKLDSELK 375
Query: 420 HEVCHWAAYYEHRMRLGQKAIFHIEGFVAKFMSIYKGFLIATF 292
HEVCHWAAYYEHRMRLGQKAIFHIE FVAKFMSIYKGFLIATF
Sbjct: 376 HEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKGFLIATF 418
>ref|XP_022005930.1| replication factor C subunit 3-like [Helianthus annuus]
gb|OTF99170.1| putative replication factor C subunit 5 [Helianthus annuus]
Length = 353
Score = 164 bits (416), Expect = 4e-46
Identities = 80/104 (76%), Positives = 85/104 (81%)
Frame = -1
Query: 600 LDWEQYVSEIASDIINEQSPKRLFLVRGKLYELLVNCIPPQIIXXXXXXXXXXXXXXXXK 421
+DWE+YV+EIASDI+ EQSPKRLF VRGKLYELLVNCIPP+II K
Sbjct: 250 MDWEEYVTEIASDIMKEQSPKRLFQVRGKLYELLVNCIPPEIILKRLLFELLKKLDSELK 309
Query: 420 HEVCHWAAYYEHRMRLGQKAIFHIEGFVAKFMSIYKGFLIATFG 289
HEVCHWAAYYEHRMRLGQKAIFHIE FVAKFMSIYKGFLIATFG
Sbjct: 310 HEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKGFLIATFG 353
>ref|XP_010266717.1| PREDICTED: replication factor C subunit 3 isoform X1 [Nelumbo
nucifera]
Length = 354
Score = 164 bits (416), Expect = 4e-46
Identities = 80/104 (76%), Positives = 84/104 (80%)
Frame = -1
Query: 600 LDWEQYVSEIASDIINEQSPKRLFLVRGKLYELLVNCIPPQIIXXXXXXXXXXXXXXXXK 421
+DWEQY+SEIASDI+ EQSPKRLFLVRGKLYELL+NCIPP II K
Sbjct: 251 MDWEQYISEIASDIMQEQSPKRLFLVRGKLYELLINCIPPVIILKRLLSELLKKLDAELK 310
Query: 420 HEVCHWAAYYEHRMRLGQKAIFHIEGFVAKFMSIYKGFLIATFG 289
HEVCHWAAYYEHRMRLGQKAIFHIE FVAKFMSIYK FLIATFG
Sbjct: 311 HEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKAFLIATFG 354
>gb|PKU72143.1| hypothetical protein MA16_Dca006736 [Dendrobium catenatum]
Length = 354
Score = 163 bits (412), Expect = 2e-45
Identities = 80/104 (76%), Positives = 83/104 (79%)
Frame = -1
Query: 600 LDWEQYVSEIASDIINEQSPKRLFLVRGKLYELLVNCIPPQIIXXXXXXXXXXXXXXXXK 421
LDWEQYVSEI SDI+ EQSPKRLF VRGK+YELLVNCIPP+II K
Sbjct: 251 LDWEQYVSEICSDIMKEQSPKRLFQVRGKIYELLVNCIPPEIILKKLLSELLKKLDSELK 310
Query: 420 HEVCHWAAYYEHRMRLGQKAIFHIEGFVAKFMSIYKGFLIATFG 289
HEVCHWAAYYEHRMRLGQKAIFHIE FVAKFMSIYK FLIATFG
Sbjct: 311 HEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKAFLIATFG 354
>ref|XP_021973280.1| replication factor C subunit 3 [Helianthus annuus]
gb|OTG20727.1| putative ATPase family associated with various cellular activities
(AAA) [Helianthus annuus]
Length = 354
Score = 163 bits (412), Expect = 2e-45
Identities = 79/104 (75%), Positives = 84/104 (80%)
Frame = -1
Query: 600 LDWEQYVSEIASDIINEQSPKRLFLVRGKLYELLVNCIPPQIIXXXXXXXXXXXXXXXXK 421
+DWE+Y+ EIASDI+ EQSPKRLF VRGKLYELLVNCIPP+II K
Sbjct: 251 MDWEEYIFEIASDIMKEQSPKRLFQVRGKLYELLVNCIPPEIILKRLLYELLKKLDFELK 310
Query: 420 HEVCHWAAYYEHRMRLGQKAIFHIEGFVAKFMSIYKGFLIATFG 289
HEVCHWAAYYEHRMRLGQKAIFHIE FVAKFMSIYKGFLIATFG
Sbjct: 311 HEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKGFLIATFG 354
>ref|XP_009399325.1| PREDICTED: replication factor C subunit 5 [Musa acuminata subsp.
malaccensis]
Length = 354
Score = 163 bits (412), Expect = 2e-45
Identities = 80/104 (76%), Positives = 83/104 (79%)
Frame = -1
Query: 600 LDWEQYVSEIASDIINEQSPKRLFLVRGKLYELLVNCIPPQIIXXXXXXXXXXXXXXXXK 421
LDWEQYVSEIASDI+ EQSPKRLF VRGK+YELLVNCIPP+II K
Sbjct: 251 LDWEQYVSEIASDIMKEQSPKRLFSVRGKIYELLVNCIPPEIILKKLLSELLKKLDSELK 310
Query: 420 HEVCHWAAYYEHRMRLGQKAIFHIEGFVAKFMSIYKGFLIATFG 289
HEVCHWAAYYEHRMR GQKAIFHIE FVAKFMSIYK FLIATFG
Sbjct: 311 HEVCHWAAYYEHRMRFGQKAIFHIEAFVAKFMSIYKAFLIATFG 354
>ref|XP_002263213.1| PREDICTED: replication factor C subunit 3 [Vitis vinifera]
emb|CBI39046.3| unnamed protein product, partial [Vitis vinifera]
Length = 354
Score = 163 bits (412), Expect = 2e-45
Identities = 79/104 (75%), Positives = 84/104 (80%)
Frame = -1
Query: 600 LDWEQYVSEIASDIINEQSPKRLFLVRGKLYELLVNCIPPQIIXXXXXXXXXXXXXXXXK 421
+DWE+YVSEIASDI+ EQSPKRLF VRGKLYELL+NCIPP+II K
Sbjct: 251 MDWEEYVSEIASDIMKEQSPKRLFQVRGKLYELLINCIPPEIILKRLLLELLKKLDAELK 310
Query: 420 HEVCHWAAYYEHRMRLGQKAIFHIEGFVAKFMSIYKGFLIATFG 289
HEVCHWAAYYEHRMRLGQKAIFHIE FVAKFMSIYK FLIATFG
Sbjct: 311 HEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKAFLIATFG 354
>ref|XP_020239031.1| replication factor C subunit 3 [Cajanus cajan]
gb|KYP42947.1| Replication factor C subunit 3 [Cajanus cajan]
Length = 354
Score = 162 bits (411), Expect = 2e-45
Identities = 78/104 (75%), Positives = 84/104 (80%)
Frame = -1
Query: 600 LDWEQYVSEIASDIINEQSPKRLFLVRGKLYELLVNCIPPQIIXXXXXXXXXXXXXXXXK 421
+DWE+Y+SEIASDI+ EQSPKRLF VRGKLYELL+NCIPP+II K
Sbjct: 251 MDWEEYISEIASDIMKEQSPKRLFQVRGKLYELLINCIPPEIILKRLLYELLRKLDAELK 310
Query: 420 HEVCHWAAYYEHRMRLGQKAIFHIEGFVAKFMSIYKGFLIATFG 289
HEVCHWAAYYEHRMRLGQKAIFHIE FVAKFMSIYK FLIATFG
Sbjct: 311 HEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKSFLIATFG 354
>ref|XP_023543490.1| replication factor C subunit 3 [Cucurbita pepo subsp. pepo]
Length = 238
Score = 159 bits (402), Expect = 2e-45
Identities = 75/104 (72%), Positives = 84/104 (80%)
Frame = -1
Query: 600 LDWEQYVSEIASDIINEQSPKRLFLVRGKLYELLVNCIPPQIIXXXXXXXXXXXXXXXXK 421
+DWE+Y+SEIASDI+ EQSPKRL+ +RGKLYELLVNCIPP+II K
Sbjct: 135 MDWEEYISEIASDIMKEQSPKRLYQIRGKLYELLVNCIPPEIILKRLLYELLKKLDAELK 194
Query: 420 HEVCHWAAYYEHRMRLGQKAIFHIEGFVAKFMSIYKGFLIATFG 289
HEVCHWAAYYEHRMRLGQK+IFHIE FVAKFMSIYK FLI+TFG
Sbjct: 195 HEVCHWAAYYEHRMRLGQKSIFHIEAFVAKFMSIYKSFLISTFG 238
>ref|XP_023929241.1| replication factor C subunit 3 [Quercus suber]
gb|POF24239.1| replication factor c subunit 3 [Quercus suber]
Length = 354
Score = 162 bits (410), Expect = 3e-45
Identities = 79/104 (75%), Positives = 84/104 (80%)
Frame = -1
Query: 600 LDWEQYVSEIASDIINEQSPKRLFLVRGKLYELLVNCIPPQIIXXXXXXXXXXXXXXXXK 421
+DWE+YV+EIASDI+ EQSPKRLF VRGKLYELLVNCIPP+II K
Sbjct: 251 MDWEEYVAEIASDIMKEQSPKRLFQVRGKLYELLVNCIPPEIILKRLLYELLKKLDAELK 310
Query: 420 HEVCHWAAYYEHRMRLGQKAIFHIEGFVAKFMSIYKGFLIATFG 289
HEVCHWAAYYEHRMRLGQKAIFHIE FVAKFMSIYK FLIATFG
Sbjct: 311 HEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKSFLIATFG 354
>ref|XP_020682194.1| replication factor C subunit 3 [Dendrobium catenatum]
Length = 390
Score = 163 bits (412), Expect = 4e-45
Identities = 80/104 (76%), Positives = 83/104 (79%)
Frame = -1
Query: 600 LDWEQYVSEIASDIINEQSPKRLFLVRGKLYELLVNCIPPQIIXXXXXXXXXXXXXXXXK 421
LDWEQYVSEI SDI+ EQSPKRLF VRGK+YELLVNCIPP+II K
Sbjct: 287 LDWEQYVSEICSDIMKEQSPKRLFQVRGKIYELLVNCIPPEIILKKLLSELLKKLDSELK 346
Query: 420 HEVCHWAAYYEHRMRLGQKAIFHIEGFVAKFMSIYKGFLIATFG 289
HEVCHWAAYYEHRMRLGQKAIFHIE FVAKFMSIYK FLIATFG
Sbjct: 347 HEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKAFLIATFG 390
>ref|XP_023751388.1| replication factor C subunit 3 [Lactuca sativa]
gb|PLY94777.1| hypothetical protein LSAT_2X103681 [Lactuca sativa]
Length = 354
Score = 162 bits (409), Expect = 4e-45
Identities = 78/104 (75%), Positives = 84/104 (80%)
Frame = -1
Query: 600 LDWEQYVSEIASDIINEQSPKRLFLVRGKLYELLVNCIPPQIIXXXXXXXXXXXXXXXXK 421
+DWE+YVSEIA+DI+ EQSPKRLF VRGKLYELLVNCIPP++I K
Sbjct: 251 MDWEEYVSEIAADIMKEQSPKRLFQVRGKLYELLVNCIPPEVILKRLLHELLKKLDSELK 310
Query: 420 HEVCHWAAYYEHRMRLGQKAIFHIEGFVAKFMSIYKGFLIATFG 289
HEVCHWAAYYEH MRLGQKAIFHIE FVAKFMSIYKGFLIATFG
Sbjct: 311 HEVCHWAAYYEHSMRLGQKAIFHIEAFVAKFMSIYKGFLIATFG 354
>ref|XP_021866052.1| replication factor C subunit 3 [Spinacia oleracea]
Length = 354
Score = 162 bits (409), Expect = 4e-45
Identities = 77/104 (74%), Positives = 84/104 (80%)
Frame = -1
Query: 600 LDWEQYVSEIASDIINEQSPKRLFLVRGKLYELLVNCIPPQIIXXXXXXXXXXXXXXXXK 421
+DWE+YV+EIASDI+ EQSPKRLF VRGK YELLVNCIPP+I+ K
Sbjct: 251 MDWEEYVTEIASDIMKEQSPKRLFQVRGKFYELLVNCIPPEIVLKRLLSELLKKLDAELK 310
Query: 420 HEVCHWAAYYEHRMRLGQKAIFHIEGFVAKFMSIYKGFLIATFG 289
HEVCHWAAYYEHRMRLGQKAIFH+E FVAKFMSIYKGFLIATFG
Sbjct: 311 HEVCHWAAYYEHRMRLGQKAIFHLEAFVAKFMSIYKGFLIATFG 354
>ref|XP_018833420.1| PREDICTED: replication factor C subunit 3 [Juglans regia]
Length = 354
Score = 162 bits (409), Expect = 4e-45
Identities = 78/104 (75%), Positives = 84/104 (80%)
Frame = -1
Query: 600 LDWEQYVSEIASDIINEQSPKRLFLVRGKLYELLVNCIPPQIIXXXXXXXXXXXXXXXXK 421
+DWE+YV+EIASDI+ EQSPKRLF VRGKLYELLVNCIPP+II K
Sbjct: 251 MDWEEYVAEIASDIMKEQSPKRLFQVRGKLYELLVNCIPPEIILKRLLYELLKKLDVELK 310
Query: 420 HEVCHWAAYYEHRMRLGQKAIFHIEGFVAKFMSIYKGFLIATFG 289
HEVCHWAAYYEHRMRLGQKAIFHIE FVAKFMSIYK FL+ATFG
Sbjct: 311 HEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKSFLVATFG 354