BLASTX nr result

ID: Ophiopogon25_contig00004941 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00004941
         (426 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020251655.1| zinc finger CCHC domain-containing protein 8...    67   3e-10
ref|XP_020251651.1| zinc finger CCHC domain-containing protein 8...    67   3e-10

>ref|XP_020251655.1| zinc finger CCHC domain-containing protein 8-like isoform X2
           [Asparagus officinalis]
          Length = 525

 Score = 67.4 bits (163), Expect = 3e-10
 Identities = 54/131 (41%), Positives = 63/131 (48%), Gaps = 1/131 (0%)
 Frame = -2

Query: 392 PGISTVIFLSGENADHRRWATPS-TFRNHSHHRPTRLLDTQRGLYSDRQRNDGPSGTEYG 216
           PGI+  I    ENAD RRWA PS +FRN    RP      QRG YSD+            
Sbjct: 380 PGINGPI---PENADQRRWAQPSNSFRN----RP------QRGQYSDQ------------ 414

Query: 215 TASGYRSSDHHRGHVHERHRDDXXXXXXXXXXXXXGHAVHGYSPRYGPYGHYDHDNSPHA 36
               +R + HH     +R+RDD                 H YSPRYG Y   +H NS +A
Sbjct: 415 ----FRGNYHH-----DRYRDDGQSMGSGFP-------AHSYSPRYGAY---EHSNSSNA 455

Query: 35  GRSPNFGRSLS 3
           GRSP FGRSLS
Sbjct: 456 GRSPAFGRSLS 466


>ref|XP_020251651.1| zinc finger CCHC domain-containing protein 8-like isoform X1
           [Asparagus officinalis]
 ref|XP_020251652.1| zinc finger CCHC domain-containing protein 8-like isoform X1
           [Asparagus officinalis]
 ref|XP_020251653.1| zinc finger CCHC domain-containing protein 8-like isoform X1
           [Asparagus officinalis]
 ref|XP_020251654.1| zinc finger CCHC domain-containing protein 8-like isoform X1
           [Asparagus officinalis]
          Length = 528

 Score = 67.4 bits (163), Expect = 3e-10
 Identities = 54/131 (41%), Positives = 63/131 (48%), Gaps = 1/131 (0%)
 Frame = -2

Query: 392 PGISTVIFLSGENADHRRWATPS-TFRNHSHHRPTRLLDTQRGLYSDRQRNDGPSGTEYG 216
           PGI+  I    ENAD RRWA PS +FRN    RP      QRG YSD+            
Sbjct: 383 PGINGPI---PENADQRRWAQPSNSFRN----RP------QRGQYSDQ------------ 417

Query: 215 TASGYRSSDHHRGHVHERHRDDXXXXXXXXXXXXXGHAVHGYSPRYGPYGHYDHDNSPHA 36
               +R + HH     +R+RDD                 H YSPRYG Y   +H NS +A
Sbjct: 418 ----FRGNYHH-----DRYRDDGQSMGSGFP-------AHSYSPRYGAY---EHSNSSNA 458

Query: 35  GRSPNFGRSLS 3
           GRSP FGRSLS
Sbjct: 459 GRSPAFGRSLS 469


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