BLASTX nr result
ID: Ophiopogon25_contig00004846
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon25_contig00004846
(381 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ONK72703.1| uncharacterized protein A4U43_C04F22240 [Asparagu... 113 2e-28
ref|XP_020261693.1| general transcription factor IIF subunit 2-l... 112 3e-28
gb|PKU64660.1| transcription initiation factor TFIIF subunit bet... 96 2e-27
ref|XP_010934085.1| PREDICTED: general transcription factor IIF ... 98 2e-27
ref|XP_008791241.1| PREDICTED: transcription initiation factor I... 100 2e-27
ref|XP_020692339.1| transcription initiation factor IIF subunit ... 96 2e-27
ref|XP_020261695.1| LOW QUALITY PROTEIN: transcription initiatio... 110 3e-27
ref|XP_020089498.1| general transcription factor IIF subunit 2 [... 97 3e-27
gb|OAY74703.1| Transcription initiation factor IIF subunit beta ... 97 3e-27
ref|XP_010918987.2| PREDICTED: transcription initiation factor I... 99 7e-27
ref|XP_008783593.1| PREDICTED: transcription initiation factor I... 94 4e-26
ref|XP_009381992.1| PREDICTED: transcription initiation factor I... 95 2e-25
gb|PKA53125.1| transcription initiation factor TFIIF subunit bet... 93 4e-25
ref|XP_020591848.1| transcription initiation factor IIF subunit ... 92 5e-25
ref|XP_018677457.1| PREDICTED: general transcription factor IIF ... 89 5e-24
ref|XP_010911299.1| PREDICTED: transcription initiation factor I... 99 6e-23
ref|XP_020151206.1| general transcription factor IIF subunit 2-l... 87 1e-21
ref|XP_012071957.1| general transcription factor IIF subunit 2 [... 94 1e-21
emb|CDM84429.1| unnamed protein product [Triticum aestivum] 87 2e-21
gb|PAN18662.1| hypothetical protein PAHAL_C02352 [Panicum hallii] 90 3e-21
>gb|ONK72703.1| uncharacterized protein A4U43_C04F22240 [Asparagus officinalis]
Length = 249
Score = 113 bits (282), Expect = 2e-28
Identities = 63/103 (61%), Positives = 68/103 (66%)
Frame = +2
Query: 71 MEGTCLRQAGPIGRCG**SAHRXXXXXXXXXXXXXXXXXXXSSSAFHPVVAKVVLSLDPL 250
M C R+A PI CG +A SA HPVVAKVVLSLDPL
Sbjct: 1 MAAACWRRARPIALCGSAAA---------------ASSSSSDPSAAHPVVAKVVLSLDPL 45
Query: 251 SNDESSSLQFKMELAQNEISNTPKSYSLNMFKDFVPMCVFSES 379
S DES+SLQFKMELAQNEI +TPKSYSLNMFKDFVPMC+FSES
Sbjct: 46 SKDESTSLQFKMELAQNEIGSTPKSYSLNMFKDFVPMCIFSES 88
>ref|XP_020261693.1| general transcription factor IIF subunit 2-like [Asparagus
officinalis]
gb|ONK72702.1| uncharacterized protein A4U43_C04F22230 [Asparagus officinalis]
Length = 252
Score = 112 bits (281), Expect = 3e-28
Identities = 56/62 (90%), Positives = 58/62 (93%)
Frame = +2
Query: 194 SSSAFHPVVAKVVLSLDPLSNDESSSLQFKMELAQNEISNTPKSYSLNMFKDFVPMCVFS 373
SSS HPVVAKVVLSLDPLSNDES+S QFKMEL QNEI+NTPKSYSLNMFKDFVPMCVFS
Sbjct: 29 SSSTAHPVVAKVVLSLDPLSNDESTSPQFKMELVQNEIANTPKSYSLNMFKDFVPMCVFS 88
Query: 374 ES 379
ES
Sbjct: 89 ES 90
>gb|PKU64660.1| transcription initiation factor TFIIF subunit beta [Dendrobium
catenatum]
Length = 269
Score = 96.3 bits (238), Expect(2) = 2e-27
Identities = 48/61 (78%), Positives = 53/61 (86%)
Frame = +2
Query: 197 SSAFHPVVAKVVLSLDPLSNDESSSLQFKMELAQNEISNTPKSYSLNMFKDFVPMCVFSE 376
SS +PVVAKVVLSLDP+ DE ++LQFKMELAQ + NTPKSYSLNMFKDFVPMCVFSE
Sbjct: 45 SSIPNPVVAKVVLSLDPVHGDEPNALQFKMELAQKDGGNTPKSYSLNMFKDFVPMCVFSE 104
Query: 377 S 379
S
Sbjct: 105 S 105
Score = 54.3 bits (129), Expect(2) = 2e-27
Identities = 24/25 (96%), Positives = 24/25 (96%)
Frame = +1
Query: 58 SVTEDGRHVLETGRADRSVWLMKCP 132
SV EDGRHVLETGRADRSVWLMKCP
Sbjct: 2 SVGEDGRHVLETGRADRSVWLMKCP 26
>ref|XP_010934085.1| PREDICTED: general transcription factor IIF subunit 2-like [Elaeis
guineensis]
Length = 267
Score = 98.2 bits (243), Expect(2) = 2e-27
Identities = 47/56 (83%), Positives = 52/56 (92%)
Frame = +2
Query: 212 PVVAKVVLSLDPLSNDESSSLQFKMELAQNEISNTPKSYSLNMFKDFVPMCVFSES 379
P+V+KVVLSLDPL +E SSLQFKME+AQN+ SNTPKSYSLNMFKDFVPMCVFSES
Sbjct: 52 PIVSKVVLSLDPLHPEEPSSLQFKMEMAQNDSSNTPKSYSLNMFKDFVPMCVFSES 107
Score = 52.4 bits (124), Expect(2) = 2e-27
Identities = 22/26 (84%), Positives = 25/26 (96%)
Frame = +1
Query: 58 SVTEDGRHVLETGRADRSVWLMKCPP 135
S+ +DGR+VLETGRADRSVWLMKCPP
Sbjct: 2 SLEDDGRNVLETGRADRSVWLMKCPP 27
>ref|XP_008791241.1| PREDICTED: transcription initiation factor IIF subunit beta-like
[Phoenix dactylifera]
Length = 265
Score = 99.8 bits (247), Expect(2) = 2e-27
Identities = 49/56 (87%), Positives = 51/56 (91%)
Frame = +2
Query: 212 PVVAKVVLSLDPLSNDESSSLQFKMELAQNEISNTPKSYSLNMFKDFVPMCVFSES 379
PVVAKVVLSLDPL DE SSLQFKME+AQN+ NTPKSYSLNMFKDFVPMCVFSES
Sbjct: 50 PVVAKVVLSLDPLHPDEPSSLQFKMEMAQNDSGNTPKSYSLNMFKDFVPMCVFSES 105
Score = 50.8 bits (120), Expect(2) = 2e-27
Identities = 21/26 (80%), Positives = 25/26 (96%)
Frame = +1
Query: 58 SVTEDGRHVLETGRADRSVWLMKCPP 135
S+ +DGR+VL+TGRADRSVWLMKCPP
Sbjct: 2 SLGDDGRNVLDTGRADRSVWLMKCPP 27
>ref|XP_020692339.1| transcription initiation factor IIF subunit beta, partial
[Dendrobium catenatum]
Length = 245
Score = 96.3 bits (238), Expect(2) = 2e-27
Identities = 48/61 (78%), Positives = 53/61 (86%)
Frame = +2
Query: 197 SSAFHPVVAKVVLSLDPLSNDESSSLQFKMELAQNEISNTPKSYSLNMFKDFVPMCVFSE 376
SS +PVVAKVVLSLDP+ DE ++LQFKMELAQ + NTPKSYSLNMFKDFVPMCVFSE
Sbjct: 45 SSIPNPVVAKVVLSLDPVHGDEPNALQFKMELAQKDGGNTPKSYSLNMFKDFVPMCVFSE 104
Query: 377 S 379
S
Sbjct: 105 S 105
Score = 54.3 bits (129), Expect(2) = 2e-27
Identities = 24/25 (96%), Positives = 24/25 (96%)
Frame = +1
Query: 58 SVTEDGRHVLETGRADRSVWLMKCP 132
SV EDGRHVLETGRADRSVWLMKCP
Sbjct: 2 SVGEDGRHVLETGRADRSVWLMKCP 26
>ref|XP_020261695.1| LOW QUALITY PROTEIN: transcription initiation factor IIF subunit
beta-like [Asparagus officinalis]
Length = 256
Score = 110 bits (275), Expect = 3e-27
Identities = 54/60 (90%), Positives = 57/60 (95%)
Frame = +2
Query: 200 SAFHPVVAKVVLSLDPLSNDESSSLQFKMELAQNEISNTPKSYSLNMFKDFVPMCVFSES 379
SA HPVVAKVVLSLDPLS DES+SLQFKMELAQNEI +TPKSYSLNMFKDFVPMC+FSES
Sbjct: 36 SAAHPVVAKVVLSLDPLSKDESTSLQFKMELAQNEIGSTPKSYSLNMFKDFVPMCIFSES 95
>ref|XP_020089498.1| general transcription factor IIF subunit 2 [Ananas comosus]
Length = 275
Score = 96.7 bits (239), Expect(2) = 3e-27
Identities = 48/62 (77%), Positives = 53/62 (85%)
Frame = +2
Query: 194 SSSAFHPVVAKVVLSLDPLSNDESSSLQFKMELAQNEISNTPKSYSLNMFKDFVPMCVFS 373
S+SA HPVVAKVVLSLDPL D+ SSLQFKME+AQ + NTP+SYSLNMFKDFVPM V S
Sbjct: 54 SASAHHPVVAKVVLSLDPLHPDDPSSLQFKMEMAQTDSGNTPRSYSLNMFKDFVPMSVIS 113
Query: 374 ES 379
ES
Sbjct: 114 ES 115
Score = 52.8 bits (125), Expect(2) = 3e-27
Identities = 22/26 (84%), Positives = 24/26 (92%)
Frame = +1
Query: 58 SVTEDGRHVLETGRADRSVWLMKCPP 135
S+ E+GRHVLET RADRSVWLMKCPP
Sbjct: 2 SMAEEGRHVLETARADRSVWLMKCPP 27
>gb|OAY74703.1| Transcription initiation factor IIF subunit beta [Ananas comosus]
Length = 273
Score = 96.7 bits (239), Expect(2) = 3e-27
Identities = 48/62 (77%), Positives = 53/62 (85%)
Frame = +2
Query: 194 SSSAFHPVVAKVVLSLDPLSNDESSSLQFKMELAQNEISNTPKSYSLNMFKDFVPMCVFS 373
S+SA HPVVAKVVLSLDPL D+ SSLQFKME+AQ + NTP+SYSLNMFKDFVPM V S
Sbjct: 52 SASAHHPVVAKVVLSLDPLHPDDPSSLQFKMEMAQTDSGNTPRSYSLNMFKDFVPMSVIS 111
Query: 374 ES 379
ES
Sbjct: 112 ES 113
Score = 52.8 bits (125), Expect(2) = 3e-27
Identities = 22/26 (84%), Positives = 24/26 (92%)
Frame = +1
Query: 58 SVTEDGRHVLETGRADRSVWLMKCPP 135
S+ E+GRHVLET RADRSVWLMKCPP
Sbjct: 2 SMAEEGRHVLETARADRSVWLMKCPP 27
>ref|XP_010918987.2| PREDICTED: transcription initiation factor IIF subunit beta-like
[Elaeis guineensis]
Length = 267
Score = 98.6 bits (244), Expect(2) = 7e-27
Identities = 48/56 (85%), Positives = 51/56 (91%)
Frame = +2
Query: 212 PVVAKVVLSLDPLSNDESSSLQFKMELAQNEISNTPKSYSLNMFKDFVPMCVFSES 379
PVV+KVVLSLDPL DE SSLQFKME+AQN+ NTPKSYSLNMFKDFVPMCVFSES
Sbjct: 52 PVVSKVVLSLDPLHPDEPSSLQFKMEMAQNDSGNTPKSYSLNMFKDFVPMCVFSES 107
Score = 49.7 bits (117), Expect(2) = 7e-27
Identities = 20/26 (76%), Positives = 25/26 (96%)
Frame = +1
Query: 58 SVTEDGRHVLETGRADRSVWLMKCPP 135
S+ +DG++VLETG+ADRSVWLMKCPP
Sbjct: 2 SLGDDGKNVLETGKADRSVWLMKCPP 27
>ref|XP_008783593.1| PREDICTED: transcription initiation factor IIF subunit beta-like
[Phoenix dactylifera]
Length = 267
Score = 93.6 bits (231), Expect(2) = 4e-26
Identities = 47/56 (83%), Positives = 50/56 (89%)
Frame = +2
Query: 212 PVVAKVVLSLDPLSNDESSSLQFKMELAQNEISNTPKSYSLNMFKDFVPMCVFSES 379
PVV+KVVLSLD L DE SSLQFKME+AQN+ SNTPKSYSLNMFKDFVPMCV SES
Sbjct: 52 PVVSKVVLSLDLLRPDEPSSLQFKMEMAQNDSSNTPKSYSLNMFKDFVPMCVVSES 107
Score = 52.4 bits (124), Expect(2) = 4e-26
Identities = 22/26 (84%), Positives = 25/26 (96%)
Frame = +1
Query: 58 SVTEDGRHVLETGRADRSVWLMKCPP 135
S+ +DGR+VLETGRADRSVWLMKCPP
Sbjct: 2 SLDDDGRNVLETGRADRSVWLMKCPP 27
>ref|XP_009381992.1| PREDICTED: transcription initiation factor IIF subunit beta [Musa
acuminata subsp. malaccensis]
Length = 259
Score = 94.7 bits (234), Expect(2) = 2e-25
Identities = 48/61 (78%), Positives = 52/61 (85%)
Frame = +2
Query: 197 SSAFHPVVAKVVLSLDPLSNDESSSLQFKMELAQNEISNTPKSYSLNMFKDFVPMCVFSE 376
SS +PVVAKVVLSLDPL D SSLQFKME+AQ + NTPKSY+LNMFKDFVPMCVFSE
Sbjct: 39 SSNPNPVVAKVVLSLDPLRPDGPSSLQFKMEMAQTDSGNTPKSYTLNMFKDFVPMCVFSE 98
Query: 377 S 379
S
Sbjct: 99 S 99
Score = 48.9 bits (115), Expect(2) = 2e-25
Identities = 21/23 (91%), Positives = 22/23 (95%)
Frame = +1
Query: 67 EDGRHVLETGRADRSVWLMKCPP 135
EDGR VLETGRA+RSVWLMKCPP
Sbjct: 2 EDGRIVLETGRAERSVWLMKCPP 24
>gb|PKA53125.1| transcription initiation factor TFIIF subunit beta [Apostasia
shenzhenica]
Length = 264
Score = 92.8 bits (229), Expect(2) = 4e-25
Identities = 45/57 (78%), Positives = 52/57 (91%)
Frame = +2
Query: 209 HPVVAKVVLSLDPLSNDESSSLQFKMELAQNEISNTPKSYSLNMFKDFVPMCVFSES 379
+PVVAKVV+SLD + N+E ++LQFKMELAQNE +TPKSYSLNMFKDFVPMCVFSES
Sbjct: 47 NPVVAKVVVSLDLIHNNEPTALQFKMELAQNENGSTPKSYSLNMFKDFVPMCVFSES 103
Score = 49.7 bits (117), Expect(2) = 4e-25
Identities = 21/25 (84%), Positives = 24/25 (96%)
Frame = +1
Query: 58 SVTEDGRHVLETGRADRSVWLMKCP 132
S+ EDGR+VLETG+ADRSVWLMKCP
Sbjct: 2 SLGEDGRYVLETGKADRSVWLMKCP 26
>ref|XP_020591848.1| transcription initiation factor IIF subunit beta [Phalaenopsis
equestris]
Length = 260
Score = 91.7 bits (226), Expect(2) = 5e-25
Identities = 44/54 (81%), Positives = 49/54 (90%)
Frame = +2
Query: 218 VAKVVLSLDPLSNDESSSLQFKMELAQNEISNTPKSYSLNMFKDFVPMCVFSES 379
+AKVVLSLDP+ NDE ++LQFKMELAQ + NTPKSYSLNMFKDFVPMCVFSES
Sbjct: 46 IAKVVLSLDPVHNDEPNALQFKMELAQKDGVNTPKSYSLNMFKDFVPMCVFSES 99
Score = 50.4 bits (119), Expect(2) = 5e-25
Identities = 22/25 (88%), Positives = 24/25 (96%)
Frame = +1
Query: 58 SVTEDGRHVLETGRADRSVWLMKCP 132
S+ EDGR+VLETGRADRSVWLMKCP
Sbjct: 2 SMGEDGRNVLETGRADRSVWLMKCP 26
>ref|XP_018677457.1| PREDICTED: general transcription factor IIF subunit 2-like [Musa
acuminata subsp. malaccensis]
Length = 259
Score = 89.0 bits (219), Expect(2) = 5e-24
Identities = 42/57 (73%), Positives = 49/57 (85%)
Frame = +2
Query: 209 HPVVAKVVLSLDPLSNDESSSLQFKMELAQNEISNTPKSYSLNMFKDFVPMCVFSES 379
+P V KVVLSLDPL D+ SSLQFKME++Q + +NTPKSY+LNMFKDFVPMCV SES
Sbjct: 43 NPAVGKVVLSLDPLRPDDPSSLQFKMEMSQTDSANTPKSYTLNMFKDFVPMCVVSES 99
Score = 49.7 bits (117), Expect(2) = 5e-24
Identities = 21/23 (91%), Positives = 22/23 (95%)
Frame = +1
Query: 67 EDGRHVLETGRADRSVWLMKCPP 135
EDGR VLETGRA+RSVWLMKCPP
Sbjct: 2 EDGRSVLETGRAERSVWLMKCPP 24
>ref|XP_010911299.1| PREDICTED: transcription initiation factor IIF subunit beta-like
[Elaeis guineensis]
Length = 222
Score = 98.6 bits (244), Expect = 6e-23
Identities = 48/56 (85%), Positives = 51/56 (91%)
Frame = +2
Query: 212 PVVAKVVLSLDPLSNDESSSLQFKMELAQNEISNTPKSYSLNMFKDFVPMCVFSES 379
PVV+KVVLSLDPL DE SSLQFKME+AQN+ NTPKSYSLNMFKDFVPMCVFSES
Sbjct: 7 PVVSKVVLSLDPLHPDEPSSLQFKMEMAQNDSGNTPKSYSLNMFKDFVPMCVFSES 62
>ref|XP_020151206.1| general transcription factor IIF subunit 2-like [Aegilops tauschii
subsp. tauschii]
Length = 263
Score = 87.4 bits (215), Expect(2) = 1e-21
Identities = 43/57 (75%), Positives = 48/57 (84%)
Frame = +2
Query: 209 HPVVAKVVLSLDPLSNDESSSLQFKMELAQNEISNTPKSYSLNMFKDFVPMCVFSES 379
+PVVAKV+LS DPLS DE + QFKME+AQ NTPK+YSLNMFKDFVPMCVFSES
Sbjct: 48 NPVVAKVILSFDPLSTDEDPN-QFKMEMAQTNNGNTPKNYSLNMFKDFVPMCVFSES 103
Score = 43.5 bits (101), Expect(2) = 1e-21
Identities = 19/24 (79%), Positives = 22/24 (91%)
Frame = +1
Query: 61 VTEDGRHVLETGRADRSVWLMKCP 132
+ E+G+H LETGRADRSVWLMKCP
Sbjct: 1 MAEEGKH-LETGRADRSVWLMKCP 23
>ref|XP_012071957.1| general transcription factor IIF subunit 2 [Jatropha curcas]
dbj|BAJ53176.1| JHL18I08.10 [Jatropha curcas]
gb|KDP38577.1| hypothetical protein JCGZ_04502 [Jatropha curcas]
Length = 262
Score = 93.6 bits (231), Expect(2) = 1e-21
Identities = 48/62 (77%), Positives = 53/62 (85%)
Frame = +2
Query: 194 SSSAFHPVVAKVVLSLDPLSNDESSSLQFKMELAQNEISNTPKSYSLNMFKDFVPMCVFS 373
SSS HPV AKVVLSLDPL +D+ S+LQF ME+A NEI N PKSYSLNMFKDFVPMCVFS
Sbjct: 42 SSSDSHPV-AKVVLSLDPLRSDDPSALQFTMEMAGNEIGNIPKSYSLNMFKDFVPMCVFS 100
Query: 374 ES 379
E+
Sbjct: 101 ET 102
Score = 37.0 bits (84), Expect(2) = 1e-21
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +1
Query: 82 VLETGRADRSVWLMKCP 132
VLET +ADRSVWLMKCP
Sbjct: 14 VLETAKADRSVWLMKCP 30
>emb|CDM84429.1| unnamed protein product [Triticum aestivum]
Length = 260
Score = 86.7 bits (213), Expect(2) = 2e-21
Identities = 43/57 (75%), Positives = 48/57 (84%)
Frame = +2
Query: 209 HPVVAKVVLSLDPLSNDESSSLQFKMELAQNEISNTPKSYSLNMFKDFVPMCVFSES 379
+PVVAKV+LS DPLS DE + QFKME+AQ NTPK+YSLNMFKDFVPMCVFSES
Sbjct: 45 NPVVAKVILSFDPLSTDEDPN-QFKMEMAQTGNGNTPKNYSLNMFKDFVPMCVFSES 100
Score = 43.5 bits (101), Expect(2) = 2e-21
Identities = 19/24 (79%), Positives = 22/24 (91%)
Frame = +1
Query: 61 VTEDGRHVLETGRADRSVWLMKCP 132
+ E+G+H LETGRADRSVWLMKCP
Sbjct: 1 MAEEGKH-LETGRADRSVWLMKCP 23
>gb|PAN18662.1| hypothetical protein PAHAL_C02352 [Panicum hallii]
Length = 260
Score = 90.1 bits (222), Expect(2) = 3e-21
Identities = 47/57 (82%), Positives = 50/57 (87%)
Frame = +2
Query: 209 HPVVAKVVLSLDPLSNDESSSLQFKMELAQNEISNTPKSYSLNMFKDFVPMCVFSES 379
+PVVAKVVLSLD LSN+E S LQFKMELAQ NTPKSYSLNMF+DFVPMCVFSES
Sbjct: 45 NPVVAKVVLSLDLLSNEEPS-LQFKMELAQTNTGNTPKSYSLNMFQDFVPMCVFSES 100
Score = 39.3 bits (90), Expect(2) = 3e-21
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = +1
Query: 85 LETGRADRSVWLMKCPP 135
LET RADRSVWLMKCPP
Sbjct: 8 LETARADRSVWLMKCPP 24