BLASTX nr result
ID: Ophiopogon25_contig00004506
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon25_contig00004506
(502 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020272730.1| U1 small nuclear ribonucleoprotein C-like, p... 119 1e-30
ref|XP_020244282.1| U1 small nuclear ribonucleoprotein C-like [A... 119 2e-30
gb|ONK65346.1| uncharacterized protein A4U43_C07F36170 [Asparagu... 119 3e-30
gb|AAD14440.1| putative C-type U1 snRNP [Arabidopsis thaliana] >... 110 4e-28
gb|PNT43865.1| hypothetical protein POPTR_003G058400v3 [Populus ... 111 5e-28
emb|CBI32274.3| unnamed protein product, partial [Vitis vinifera] 112 6e-28
dbj|GAY40834.1| hypothetical protein CUMW_054880 [Citrus unshiu]... 112 8e-28
ref|XP_006444209.1| U1 small nuclear ribonucleoprotein C [Citrus... 112 8e-28
gb|KCW87897.1| hypothetical protein EUGRSUZ_A002862, partial [Eu... 111 8e-28
gb|PKI68530.1| hypothetical protein CRG98_011079 [Punica granatum] 112 8e-28
ref|XP_024167951.1| U1 small nuclear ribonucleoprotein C [Rosa c... 112 9e-28
gb|POO03580.1| U1 small nuclear ribonucleoprotein C [Trema orien... 112 9e-28
gb|PON63557.1| U1 small nuclear ribonucleoprotein C [Parasponia ... 112 9e-28
ref|XP_021906898.1| U1 small nuclear ribonucleoprotein C isoform... 112 1e-27
ref|XP_021681417.1| U1 small nuclear ribonucleoprotein C-like [H... 112 1e-27
ref|XP_021906897.1| U1 small nuclear ribonucleoprotein C isoform... 112 1e-27
ref|XP_012070589.1| U1 small nuclear ribonucleoprotein C [Jatrop... 112 1e-27
ref|XP_021608455.1| U1 small nuclear ribonucleoprotein C [Maniho... 112 1e-27
ref|XP_002270246.1| PREDICTED: U1 small nuclear ribonucleoprotei... 112 1e-27
ref|XP_021672230.1| U1 small nuclear ribonucleoprotein C-like [H... 112 1e-27
>ref|XP_020272730.1| U1 small nuclear ribonucleoprotein C-like, partial [Asparagus
officinalis]
Length = 179
Score = 119 bits (297), Expect = 1e-30
Identities = 57/69 (82%), Positives = 57/69 (82%)
Frame = -1
Query: 208 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRXXXXXXXXXXXQSLIDQKIKEHLGQ 29
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR QSLIDQKIKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQKIKEHLGQ 60
Query: 28 TAVQYQVGA 2
AVQYQVGA
Sbjct: 61 AAVQYQVGA 69
>ref|XP_020244282.1| U1 small nuclear ribonucleoprotein C-like [Asparagus officinalis]
gb|ONK60140.1| uncharacterized protein A4U43_C08F14810 [Asparagus officinalis]
Length = 202
Score = 119 bits (297), Expect = 2e-30
Identities = 57/69 (82%), Positives = 57/69 (82%)
Frame = -1
Query: 208 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRXXXXXXXXXXXQSLIDQKIKEHLGQ 29
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR QSLIDQKIKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQKIKEHLGQ 60
Query: 28 TAVQYQVGA 2
AVQYQVGA
Sbjct: 61 AAVQYQVGA 69
>gb|ONK65346.1| uncharacterized protein A4U43_C07F36170 [Asparagus officinalis]
Length = 217
Score = 119 bits (297), Expect = 3e-30
Identities = 57/69 (82%), Positives = 57/69 (82%)
Frame = -1
Query: 208 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRXXXXXXXXXXXQSLIDQKIKEHLGQ 29
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR QSLIDQKIKEHLGQ
Sbjct: 35 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQKIKEHLGQ 94
Query: 28 TAVQYQVGA 2
AVQYQVGA
Sbjct: 95 AAVQYQVGA 103
>gb|AAD14440.1| putative C-type U1 snRNP [Arabidopsis thaliana]
emb|CAB77797.1| putative C-type U1 snRNP [Arabidopsis thaliana]
Length = 112
Score = 110 bits (274), Expect = 4e-28
Identities = 53/69 (76%), Positives = 54/69 (78%)
Frame = -1
Query: 208 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRXXXXXXXXXXXQSLIDQKIKEHLGQ 29
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR QSLIDQ+IKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 28 TAVQYQVGA 2
T QVGA
Sbjct: 61 TGGYQQVGA 69
>gb|PNT43865.1| hypothetical protein POPTR_003G058400v3 [Populus trichocarpa]
Length = 153
Score = 111 bits (277), Expect = 5e-28
Identities = 53/69 (76%), Positives = 55/69 (79%)
Frame = -1
Query: 208 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRXXXXXXXXXXXQSLIDQKIKEHLGQ 29
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR QS+IDQ+IKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSIIDQRIKEHLGQ 60
Query: 28 TAVQYQVGA 2
TA QVGA
Sbjct: 61 TAAFQQVGA 69
>emb|CBI32274.3| unnamed protein product, partial [Vitis vinifera]
Length = 190
Score = 112 bits (279), Expect = 6e-28
Identities = 54/69 (78%), Positives = 55/69 (79%)
Frame = -1
Query: 208 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRXXXXXXXXXXXQSLIDQKIKEHLGQ 29
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR QSLIDQ+IKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 28 TAVQYQVGA 2
TA QVGA
Sbjct: 61 TAAFQQVGA 69
>dbj|GAY40834.1| hypothetical protein CUMW_054880 [Citrus unshiu]
dbj|GAY40835.1| hypothetical protein CUMW_054880 [Citrus unshiu]
Length = 197
Score = 112 bits (279), Expect = 8e-28
Identities = 54/69 (78%), Positives = 55/69 (79%)
Frame = -1
Query: 208 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRXXXXXXXXXXXQSLIDQKIKEHLGQ 29
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR QSLIDQ+IKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 28 TAVQYQVGA 2
TA QVGA
Sbjct: 61 TAAFQQVGA 69
>ref|XP_006444209.1| U1 small nuclear ribonucleoprotein C [Citrus clementina]
ref|XP_006479851.1| PREDICTED: U1 small nuclear ribonucleoprotein C [Citrus sinensis]
gb|ESR57449.1| hypothetical protein CICLE_v10022350mg [Citrus clementina]
gb|KDO87418.1| hypothetical protein CISIN_1g029190mg [Citrus sinensis]
gb|KDO87419.1| hypothetical protein CISIN_1g029190mg [Citrus sinensis]
Length = 197
Score = 112 bits (279), Expect = 8e-28
Identities = 54/69 (78%), Positives = 55/69 (79%)
Frame = -1
Query: 208 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRXXXXXXXXXXXQSLIDQKIKEHLGQ 29
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR QSLIDQ+IKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 28 TAVQYQVGA 2
TA QVGA
Sbjct: 61 TAAFQQVGA 69
>gb|KCW87897.1| hypothetical protein EUGRSUZ_A002862, partial [Eucalyptus grandis]
Length = 185
Score = 111 bits (278), Expect = 8e-28
Identities = 54/70 (77%), Positives = 55/70 (78%)
Frame = -1
Query: 211 AMPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRXXXXXXXXXXXQSLIDQKIKEHLG 32
AMPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR QSLIDQ+IKEHLG
Sbjct: 64 AMPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSLIDQRIKEHLG 123
Query: 31 QTAVQYQVGA 2
Q A QVGA
Sbjct: 124 QAAAFQQVGA 133
>gb|PKI68530.1| hypothetical protein CRG98_011079 [Punica granatum]
Length = 199
Score = 112 bits (279), Expect = 8e-28
Identities = 54/69 (78%), Positives = 55/69 (79%)
Frame = -1
Query: 208 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRXXXXXXXXXXXQSLIDQKIKEHLGQ 29
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR QSLIDQ+IKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRLYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 28 TAVQYQVGA 2
TA QVGA
Sbjct: 61 TAAFQQVGA 69
>ref|XP_024167951.1| U1 small nuclear ribonucleoprotein C [Rosa chinensis]
gb|PRQ26247.1| putative U1 small nuclear ribonucleoprotein C [Rosa chinensis]
Length = 203
Score = 112 bits (279), Expect = 9e-28
Identities = 54/69 (78%), Positives = 55/69 (79%)
Frame = -1
Query: 208 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRXXXXXXXXXXXQSLIDQKIKEHLGQ 29
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR QSLIDQ+IKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRQYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 28 TAVQYQVGA 2
TA QVGA
Sbjct: 61 TAAYGQVGA 69
>gb|POO03580.1| U1 small nuclear ribonucleoprotein C [Trema orientalis]
Length = 203
Score = 112 bits (279), Expect = 9e-28
Identities = 54/69 (78%), Positives = 55/69 (79%)
Frame = -1
Query: 208 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRXXXXXXXXXXXQSLIDQKIKEHLGQ 29
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR QSLIDQ+IKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 28 TAVQYQVGA 2
TA QVGA
Sbjct: 61 TAAFQQVGA 69
>gb|PON63557.1| U1 small nuclear ribonucleoprotein C [Parasponia andersonii]
Length = 203
Score = 112 bits (279), Expect = 9e-28
Identities = 54/69 (78%), Positives = 55/69 (79%)
Frame = -1
Query: 208 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRXXXXXXXXXXXQSLIDQKIKEHLGQ 29
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR QSLIDQ+IKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 28 TAVQYQVGA 2
TA QVGA
Sbjct: 61 TAAFQQVGA 69
>ref|XP_021906898.1| U1 small nuclear ribonucleoprotein C isoform X2 [Carica papaya]
Length = 205
Score = 112 bits (279), Expect = 1e-27
Identities = 54/69 (78%), Positives = 55/69 (79%)
Frame = -1
Query: 208 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRXXXXXXXXXXXQSLIDQKIKEHLGQ 29
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR QSLIDQ+IKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 28 TAVQYQVGA 2
TA QVGA
Sbjct: 61 TAAFQQVGA 69
>ref|XP_021681417.1| U1 small nuclear ribonucleoprotein C-like [Hevea brasiliensis]
ref|XP_021681418.1| U1 small nuclear ribonucleoprotein C-like [Hevea brasiliensis]
Length = 205
Score = 112 bits (279), Expect = 1e-27
Identities = 54/69 (78%), Positives = 55/69 (79%)
Frame = -1
Query: 208 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRXXXXXXXXXXXQSLIDQKIKEHLGQ 29
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR QSLIDQ+IKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRAYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 28 TAVQYQVGA 2
TA QVGA
Sbjct: 61 TAAFQQVGA 69
>ref|XP_021906897.1| U1 small nuclear ribonucleoprotein C isoform X1 [Carica papaya]
Length = 206
Score = 112 bits (279), Expect = 1e-27
Identities = 54/69 (78%), Positives = 55/69 (79%)
Frame = -1
Query: 208 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRXXXXXXXXXXXQSLIDQKIKEHLGQ 29
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR QSLIDQ+IKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 28 TAVQYQVGA 2
TA QVGA
Sbjct: 61 TAAFQQVGA 69
>ref|XP_012070589.1| U1 small nuclear ribonucleoprotein C [Jatropha curcas]
ref|XP_012070590.1| U1 small nuclear ribonucleoprotein C [Jatropha curcas]
ref|XP_020534433.1| U1 small nuclear ribonucleoprotein C [Jatropha curcas]
gb|KDP39407.1| hypothetical protein JCGZ_03689 [Jatropha curcas]
Length = 207
Score = 112 bits (279), Expect = 1e-27
Identities = 54/69 (78%), Positives = 55/69 (79%)
Frame = -1
Query: 208 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRXXXXXXXXXXXQSLIDQKIKEHLGQ 29
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR QSLIDQ+IKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 28 TAVQYQVGA 2
TA QVGA
Sbjct: 61 TAAFQQVGA 69
>ref|XP_021608455.1| U1 small nuclear ribonucleoprotein C [Manihot esculenta]
gb|OAY61744.1| hypothetical protein MANES_01G213100 [Manihot esculenta]
gb|OAY61745.1| hypothetical protein MANES_01G213100 [Manihot esculenta]
Length = 209
Score = 112 bits (279), Expect = 1e-27
Identities = 54/69 (78%), Positives = 55/69 (79%)
Frame = -1
Query: 208 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRXXXXXXXXXXXQSLIDQKIKEHLGQ 29
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR QSLIDQ+IKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 28 TAVQYQVGA 2
TA QVGA
Sbjct: 61 TAAFQQVGA 69
>ref|XP_002270246.1| PREDICTED: U1 small nuclear ribonucleoprotein C [Vitis vinifera]
sp|F6HQ26.1|RU1C_VITVI RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1 snRNP
C; Short=U1-C; Short=U1C
Length = 213
Score = 112 bits (279), Expect = 1e-27
Identities = 54/69 (78%), Positives = 55/69 (79%)
Frame = -1
Query: 208 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRXXXXXXXXXXXQSLIDQKIKEHLGQ 29
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR QSLIDQ+IKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 28 TAVQYQVGA 2
TA QVGA
Sbjct: 61 TAAFQQVGA 69
>ref|XP_021672230.1| U1 small nuclear ribonucleoprotein C-like [Hevea brasiliensis]
Length = 215
Score = 112 bits (279), Expect = 1e-27
Identities = 54/69 (78%), Positives = 55/69 (79%)
Frame = -1
Query: 208 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRXXXXXXXXXXXQSLIDQKIKEHLGQ 29
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR QSLIDQ+IKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRAYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 28 TAVQYQVGA 2
TA QVGA
Sbjct: 61 TAAFQQVGA 69