BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00004239
         (375 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020260279.1| photosystem II core complex proteins psbY, c...    69   1e-11
ref|XP_020088178.1| photosystem II core complex proteins psbY, c...    67   4e-11
gb|OAY65316.1| Photosystem II core complex proteins psbY, chloro...    67   4e-11
gb|KMZ58853.1| Photosystem II core complex proteins psbY, chloro...    66   7e-11
ref|XP_014508038.1| photosystem II core complex proteins psbY, c...    66   1e-10
gb|AFK46434.1| unknown [Lotus japonicus]                               66   1e-10
gb|ACG27309.1| photosystem II core complex proteins psbY [Zea mays]    65   2e-10
ref|XP_010933748.1| PREDICTED: photosystem II core complex prote...    65   2e-10
ref|XP_008796872.1| PREDICTED: photosystem II core complex prote...    65   2e-10
ref|XP_017421289.1| PREDICTED: photosystem II core complex prote...    65   2e-10
ref|NP_001147385.1| photosystem II core complex proteins psbY [Z...    65   2e-10
ref|XP_003601864.2| photosystem II core complex family psbY prot...    65   2e-10
ref|XP_004972988.1| photosystem II core complex proteins psbY, c...    65   2e-10
ref|XP_002444967.1| photosystem II core complex proteins psbY, c...    65   3e-10
gb|ABK22811.1| unknown [Picea sitchensis]                              65   3e-10
gb|ABK21316.1| unknown [Picea sitchensis] >gi|116779793|gb|ABK21...    65   3e-10
gb|ABK26111.1| unknown [Picea sitchensis] >gi|116792769|gb|ABK26...    65   3e-10
ref|XP_009415072.1| PREDICTED: photosystem II core complex prote...    65   4e-10
ref|XP_018677821.1| PREDICTED: photosystem II core complex prote...    65   4e-10
gb|PNX78334.1| photosystem II core complex proteins psbY chlorop...    61   5e-10

>ref|XP_020260279.1| photosystem II core complex proteins psbY, chloroplastic [Asparagus
           officinalis]
 gb|ONK71204.1| uncharacterized protein A4U43_C04F5960 [Asparagus officinalis]
          Length = 192

 Score = 68.6 bits (166), Expect = 1e-11
 Identities = 32/34 (94%), Positives = 34/34 (100%)
 Frame = -3

Query: 241 RGLLLLFVVAPAIGWVLFNILQPALNQINRMRSG 140
           RGLLLLFVVAPAIGWVL+NILQPALNQ+NRMRSG
Sbjct: 159 RGLLLLFVVAPAIGWVLYNILQPALNQLNRMRSG 192



 Score = 55.5 bits (132), Expect = 9e-07
 Identities = 26/33 (78%), Positives = 28/33 (84%)
 Frame = -3

Query: 241 RGLLLLFVVAPAIGWVLFNILQPALNQINRMRS 143
           RGL LL  + PAI WVLFNILQPALNQ+NRMRS
Sbjct: 83  RGLALLLPLIPAIAWVLFNILQPALNQLNRMRS 115


>ref|XP_020088178.1| photosystem II core complex proteins psbY, chloroplastic [Ananas
           comosus]
          Length = 212

 Score = 67.4 bits (163), Expect = 4e-11
 Identities = 32/34 (94%), Positives = 33/34 (97%)
 Frame = -3

Query: 241 RGLLLLFVVAPAIGWVLFNILQPALNQINRMRSG 140
           RGLLLLFVVAPAI WVLFNILQPALNQ+NRMRSG
Sbjct: 179 RGLLLLFVVAPAIAWVLFNILQPALNQLNRMRSG 212


>gb|OAY65316.1| Photosystem II core complex proteins psbY, chloroplastic [Ananas
           comosus]
          Length = 215

 Score = 67.4 bits (163), Expect = 4e-11
 Identities = 32/34 (94%), Positives = 33/34 (97%)
 Frame = -3

Query: 241 RGLLLLFVVAPAIGWVLFNILQPALNQINRMRSG 140
           RGLLLLFVVAPAI WVLFNILQPALNQ+NRMRSG
Sbjct: 182 RGLLLLFVVAPAIAWVLFNILQPALNQLNRMRSG 215


>gb|KMZ58853.1| Photosystem II core complex proteins psbY, chloroplastic [Zostera
           marina]
          Length = 185

 Score = 66.2 bits (160), Expect = 7e-11
 Identities = 29/34 (85%), Positives = 34/34 (100%)
 Frame = -3

Query: 241 RGLLLLFVVAPAIGWVLFNILQPALNQINRMRSG 140
           RG+LLLFV+APA+GWVL+NILQPALNQIN+MRSG
Sbjct: 152 RGVLLLFVIAPAVGWVLYNILQPALNQINKMRSG 185


>ref|XP_014508038.1| photosystem II core complex proteins psbY, chloroplastic [Vigna
           radiata var. radiata]
          Length = 189

 Score = 65.9 bits (159), Expect = 1e-10
 Identities = 32/33 (96%), Positives = 32/33 (96%)
 Frame = -3

Query: 241 RGLLLLFVVAPAIGWVLFNILQPALNQINRMRS 143
           RG LLLFVVAPAIGWVLFNILQPALNQINRMRS
Sbjct: 156 RGQLLLFVVAPAIGWVLFNILQPALNQINRMRS 188



 Score = 59.3 bits (142), Expect = 3e-08
 Identities = 28/33 (84%), Positives = 29/33 (87%)
 Frame = -3

Query: 241 RGLLLLFVVAPAIGWVLFNILQPALNQINRMRS 143
           RGL LL  + PAIGWVLFNILQPALNQINRMRS
Sbjct: 85  RGLALLLPIIPAIGWVLFNILQPALNQINRMRS 117


>gb|AFK46434.1| unknown [Lotus japonicus]
          Length = 205

 Score = 65.9 bits (159), Expect = 1e-10
 Identities = 32/33 (96%), Positives = 32/33 (96%)
 Frame = -3

Query: 241 RGLLLLFVVAPAIGWVLFNILQPALNQINRMRS 143
           RG LLLFVVAPAIGWVLFNILQPALNQINRMRS
Sbjct: 172 RGQLLLFVVAPAIGWVLFNILQPALNQINRMRS 204



 Score = 53.9 bits (128), Expect = 4e-06
 Identities = 26/33 (78%), Positives = 28/33 (84%)
 Frame = -3

Query: 241 RGLLLLFVVAPAIGWVLFNILQPALNQINRMRS 143
           RGL LL  + PAI WVLFNILQPALNQINRMR+
Sbjct: 93  RGLALLLPLIPAIVWVLFNILQPALNQINRMRN 125


>gb|ACG27309.1| photosystem II core complex proteins psbY [Zea mays]
          Length = 176

 Score = 65.1 bits (157), Expect = 2e-10
 Identities = 31/33 (93%), Positives = 32/33 (96%)
 Frame = -3

Query: 241 RGLLLLFVVAPAIGWVLFNILQPALNQINRMRS 143
           RGLLLL VVAPAIGWVLFNILQPALNQ+NRMRS
Sbjct: 143 RGLLLLIVVAPAIGWVLFNILQPALNQLNRMRS 175



 Score = 61.2 bits (147), Expect = 5e-09
 Identities = 29/33 (87%), Positives = 31/33 (93%)
 Frame = -3

Query: 241 RGLLLLFVVAPAIGWVLFNILQPALNQINRMRS 143
           RG LLL VVAPAIGWVL+NILQPALNQ+NRMRS
Sbjct: 67  RGQLLLVVVAPAIGWVLYNILQPALNQLNRMRS 99


>ref|XP_010933748.1| PREDICTED: photosystem II core complex proteins psbY,
           chloroplastic-like [Elaeis guineensis]
          Length = 203

 Score = 65.5 bits (158), Expect = 2e-10
 Identities = 32/34 (94%), Positives = 33/34 (97%)
 Frame = -3

Query: 241 RGLLLLFVVAPAIGWVLFNILQPALNQINRMRSG 140
           RGLLLLFVVAPAI WVL+NILQPALNQINRMRSG
Sbjct: 170 RGLLLLFVVAPAILWVLYNILQPALNQINRMRSG 203



 Score = 53.5 bits (127), Expect = 5e-06
 Identities = 25/33 (75%), Positives = 28/33 (84%)
 Frame = -3

Query: 241 RGLLLLFVVAPAIGWVLFNILQPALNQINRMRS 143
           RGL LL  + PAI WVL+NILQPALNQ+NRMRS
Sbjct: 95  RGLALLIPIIPAILWVLYNILQPALNQLNRMRS 127


>ref|XP_008796872.1| PREDICTED: photosystem II core complex proteins psbY, chloroplastic
           [Phoenix dactylifera]
          Length = 203

 Score = 65.5 bits (158), Expect = 2e-10
 Identities = 32/34 (94%), Positives = 33/34 (97%)
 Frame = -3

Query: 241 RGLLLLFVVAPAIGWVLFNILQPALNQINRMRSG 140
           RGLLLLFVVAPAI WVL+NILQPALNQINRMRSG
Sbjct: 170 RGLLLLFVVAPAILWVLYNILQPALNQINRMRSG 203



 Score = 53.9 bits (128), Expect = 4e-06
 Identities = 23/33 (69%), Positives = 28/33 (84%)
 Frame = -3

Query: 241 RGLLLLFVVAPAIGWVLFNILQPALNQINRMRS 143
           RGL +L  + PA+ WVL+NILQPALNQ+NRMRS
Sbjct: 95  RGLAILIPIIPAVAWVLYNILQPALNQLNRMRS 127


>ref|XP_017421289.1| PREDICTED: photosystem II core complex proteins psbY, chloroplastic
           [Vigna angularis]
 dbj|BAT73458.1| hypothetical protein VIGAN_01094200 [Vigna angularis var.
           angularis]
          Length = 189

 Score = 65.1 bits (157), Expect = 2e-10
 Identities = 31/33 (93%), Positives = 32/33 (96%)
 Frame = -3

Query: 241 RGLLLLFVVAPAIGWVLFNILQPALNQINRMRS 143
           RG LLLFVVAPAIGWVLFNILQPALNQ+NRMRS
Sbjct: 156 RGQLLLFVVAPAIGWVLFNILQPALNQLNRMRS 188



 Score = 59.3 bits (142), Expect = 3e-08
 Identities = 28/33 (84%), Positives = 29/33 (87%)
 Frame = -3

Query: 241 RGLLLLFVVAPAIGWVLFNILQPALNQINRMRS 143
           RGL LL  + PAIGWVLFNILQPALNQINRMRS
Sbjct: 85  RGLALLLPIIPAIGWVLFNILQPALNQINRMRS 117


>ref|NP_001147385.1| photosystem II core complex proteins psbY [Zea mays]
 gb|ACG27235.1| photosystem II core complex proteins psbY [Zea mays]
 gb|AQK78407.1| Photosystem II core complex protein psbY [Zea mays]
          Length = 191

 Score = 65.1 bits (157), Expect = 2e-10
 Identities = 31/33 (93%), Positives = 32/33 (96%)
 Frame = -3

Query: 241 RGLLLLFVVAPAIGWVLFNILQPALNQINRMRS 143
           RGLLLL VVAPAIGWVLFNILQPALNQ+NRMRS
Sbjct: 158 RGLLLLIVVAPAIGWVLFNILQPALNQLNRMRS 190



 Score = 61.2 bits (147), Expect = 6e-09
 Identities = 29/33 (87%), Positives = 31/33 (93%)
 Frame = -3

Query: 241 RGLLLLFVVAPAIGWVLFNILQPALNQINRMRS 143
           RG LLL VVAPAIGWVL+NILQPALNQ+NRMRS
Sbjct: 81  RGQLLLVVVAPAIGWVLYNILQPALNQLNRMRS 113


>ref|XP_003601864.2| photosystem II core complex family psbY protein [Medicago
           truncatula]
 gb|AFK43145.1| unknown [Medicago truncatula]
 gb|AES72115.2| photosystem II core complex family psbY protein [Medicago
           truncatula]
          Length = 197

 Score = 65.1 bits (157), Expect = 2e-10
 Identities = 31/33 (93%), Positives = 32/33 (96%)
 Frame = -3

Query: 241 RGLLLLFVVAPAIGWVLFNILQPALNQINRMRS 143
           RG LLLFVVAPAIGWVLFNILQPALNQINRMR+
Sbjct: 90  RGTLLLFVVAPAIGWVLFNILQPALNQINRMRN 122



 Score = 61.2 bits (147), Expect = 7e-09
 Identities = 30/33 (90%), Positives = 31/33 (93%)
 Frame = -3

Query: 241 RGLLLLFVVAPAIGWVLFNILQPALNQINRMRS 143
           RG LLLFVVAPAI WVL+NILQPALNQINRMRS
Sbjct: 164 RGTLLLFVVAPAILWVLYNILQPALNQINRMRS 196


>ref|XP_004972988.1| photosystem II core complex proteins psbY, chloroplastic [Setaria
           italica]
          Length = 197

 Score = 65.1 bits (157), Expect = 2e-10
 Identities = 31/33 (93%), Positives = 32/33 (96%)
 Frame = -3

Query: 241 RGLLLLFVVAPAIGWVLFNILQPALNQINRMRS 143
           RGLLLL VVAPAIGWVLFNILQPALNQ+NRMRS
Sbjct: 164 RGLLLLIVVAPAIGWVLFNILQPALNQLNRMRS 196



 Score = 63.9 bits (154), Expect = 7e-10
 Identities = 30/33 (90%), Positives = 32/33 (96%)
 Frame = -3

Query: 241 RGLLLLFVVAPAIGWVLFNILQPALNQINRMRS 143
           RG LLLFVVAPAIGWVL+NILQPALNQ+NRMRS
Sbjct: 86  RGQLLLFVVAPAIGWVLYNILQPALNQLNRMRS 118


>ref|XP_002444967.1| photosystem II core complex proteins psbY, chloroplastic [Sorghum
           bicolor]
 gb|EES14462.1| hypothetical protein SORBI_3007G023300 [Sorghum bicolor]
          Length = 203

 Score = 65.1 bits (157), Expect = 3e-10
 Identities = 31/33 (93%), Positives = 32/33 (96%)
 Frame = -3

Query: 241 RGLLLLFVVAPAIGWVLFNILQPALNQINRMRS 143
           RGLLLL VVAPAIGWVLFNILQPALNQ+NRMRS
Sbjct: 170 RGLLLLIVVAPAIGWVLFNILQPALNQLNRMRS 202



 Score = 63.9 bits (154), Expect = 7e-10
 Identities = 30/33 (90%), Positives = 32/33 (96%)
 Frame = -3

Query: 241 RGLLLLFVVAPAIGWVLFNILQPALNQINRMRS 143
           RG LLLFVVAPAIGWVL+NILQPALNQ+NRMRS
Sbjct: 92  RGQLLLFVVAPAIGWVLYNILQPALNQLNRMRS 124


>gb|ABK22811.1| unknown [Picea sitchensis]
          Length = 206

 Score = 65.1 bits (157), Expect = 3e-10
 Identities = 31/34 (91%), Positives = 32/34 (94%)
 Frame = -3

Query: 241 RGLLLLFVVAPAIGWVLFNILQPALNQINRMRSG 140
           RGLLLL VV PAIGWVLFNILQPALNQIN+MRSG
Sbjct: 173 RGLLLLIVVIPAIGWVLFNILQPALNQINKMRSG 206


>gb|ABK21316.1| unknown [Picea sitchensis]
 gb|ABK21432.1| unknown [Picea sitchensis]
 gb|ABK21621.1| unknown [Picea sitchensis]
 gb|ABK22335.1| unknown [Picea sitchensis]
 gb|ABK22345.1| unknown [Picea sitchensis]
 gb|ABK23350.1| unknown [Picea sitchensis]
 gb|ABK26075.1| unknown [Picea sitchensis]
 gb|ABK26082.1| unknown [Picea sitchensis]
 gb|ACN40464.1| unknown [Picea sitchensis]
 gb|ACN40529.1| unknown [Picea sitchensis]
          Length = 206

 Score = 65.1 bits (157), Expect = 3e-10
 Identities = 31/34 (91%), Positives = 32/34 (94%)
 Frame = -3

Query: 241 RGLLLLFVVAPAIGWVLFNILQPALNQINRMRSG 140
           RGLLLL VV PAIGWVLFNILQPALNQIN+MRSG
Sbjct: 173 RGLLLLIVVIPAIGWVLFNILQPALNQINKMRSG 206


>gb|ABK26111.1| unknown [Picea sitchensis]
 gb|ABK26490.1| unknown [Picea sitchensis]
 gb|ABR16165.1| unknown [Picea sitchensis]
 gb|ABR16269.1| unknown [Picea sitchensis]
 gb|ABR17041.1| unknown [Picea sitchensis]
 gb|ABR17286.1| unknown [Picea sitchensis]
 gb|ACN40502.1| unknown [Picea sitchensis]
          Length = 207

 Score = 65.1 bits (157), Expect = 3e-10
 Identities = 31/34 (91%), Positives = 32/34 (94%)
 Frame = -3

Query: 241 RGLLLLFVVAPAIGWVLFNILQPALNQINRMRSG 140
           RGLLLL VV PAIGWVLFNILQPALNQIN+MRSG
Sbjct: 173 RGLLLLIVVIPAIGWVLFNILQPALNQINKMRSG 206


>ref|XP_009415072.1| PREDICTED: photosystem II core complex proteins psbY,
           chloroplastic-like [Musa acuminata subsp. malaccensis]
          Length = 201

 Score = 64.7 bits (156), Expect = 4e-10
 Identities = 31/34 (91%), Positives = 33/34 (97%)
 Frame = -3

Query: 241 RGLLLLFVVAPAIGWVLFNILQPALNQINRMRSG 140
           RGLLLLFVVAPAI WVL+NILQPALNQ+NRMRSG
Sbjct: 168 RGLLLLFVVAPAILWVLYNILQPALNQLNRMRSG 201


>ref|XP_018677821.1| PREDICTED: photosystem II core complex proteins psbY,
           chloroplastic-like [Musa acuminata subsp. malaccensis]
          Length = 202

 Score = 64.7 bits (156), Expect = 4e-10
 Identities = 31/34 (91%), Positives = 33/34 (97%)
 Frame = -3

Query: 241 RGLLLLFVVAPAIGWVLFNILQPALNQINRMRSG 140
           RGLLLLFVVAPAI WVL+NILQPALNQ+NRMRSG
Sbjct: 169 RGLLLLFVVAPAILWVLYNILQPALNQLNRMRSG 202


>gb|PNX78334.1| photosystem II core complex proteins psbY chloroplastic-like,
           partial [Trifolium pratense]
          Length = 54

 Score = 60.8 bits (146), Expect = 5e-10
 Identities = 30/33 (90%), Positives = 31/33 (93%)
 Frame = -3

Query: 241 RGLLLLFVVAPAIGWVLFNILQPALNQINRMRS 143
           RG LLLFVVAPAI WVL+NILQPALNQINRMRS
Sbjct: 21  RGQLLLFVVAPAILWVLYNILQPALNQINRMRS 53