BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00004039
         (2610 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020258675.1| protein RNA-directed DNA methylation 3, part...   950   0.0  
gb|ONK75729.1| uncharacterized protein A4U43_C03F19930 [Asparagu...   946   0.0  
ref|XP_010933206.1| PREDICTED: protein RNA-directed DNA methylat...   739   0.0  
ref|XP_010933194.1| PREDICTED: protein RNA-directed DNA methylat...   739   0.0  
ref|XP_010933212.1| PREDICTED: protein RNA-directed DNA methylat...   738   0.0  
ref|XP_010933199.1| PREDICTED: protein RNA-directed DNA methylat...   738   0.0  
ref|XP_008794002.1| PREDICTED: protein RNA-directed DNA methylat...   719   0.0  
ref|XP_020091605.1| protein RNA-directed DNA methylation 3 isofo...   679   0.0  
ref|XP_020091606.1| protein RNA-directed DNA methylation 3 isofo...   679   0.0  
ref|XP_020091604.1| protein RNA-directed DNA methylation 3 isofo...   679   0.0  
ref|XP_020091602.1| protein RNA-directed DNA methylation 3 isofo...   679   0.0  
gb|OAY66311.1| Protein RNA-directed DNA methylation 3 [Ananas co...   671   0.0  
ref|XP_020682212.1| protein RNA-directed DNA methylation 3 [Dend...   640   0.0  
ref|XP_009409884.1| PREDICTED: protein RNA-directed DNA methylat...   634   0.0  
ref|XP_009409883.1| PREDICTED: protein RNA-directed DNA methylat...   634   0.0  
gb|PAN18741.1| hypothetical protein PAHAL_C02415 [Panicum hallii]     625   0.0  
gb|PAN18742.1| hypothetical protein PAHAL_C02415 [Panicum hallii]     625   0.0  
gb|AQK94721.1| Protein RNA-directed DNA methylation 3 [Zea mays]      610   0.0  
ref|XP_020587140.1| protein RNA-directed DNA methylation 3 [Phal...   627   0.0  
ref|XP_004961584.1| protein RNA-directed DNA methylation 3 [Seta...   621   0.0  

>ref|XP_020258675.1| protein RNA-directed DNA methylation 3, partial [Asparagus
            officinalis]
          Length = 1734

 Score =  950 bits (2455), Expect = 0.0
 Identities = 503/721 (69%), Positives = 554/721 (76%), Gaps = 3/721 (0%)
 Frame = -1

Query: 2433 RKRRAGVLQFFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFSKGGRSEGKEFRSAGK 2254
            RKRR+GVLQFF                                     +   K+F+ AGK
Sbjct: 2    RKRRSGVLQFFDDAAEDDGYEEDEENEGQDDLVYDDKDLNLDI----NKESSKDFKGAGK 57

Query: 2253 PQYLPFLVKXXXXXXXXXXXLIKDRYGRGSEYAVYDEDPKECDDGVSVELSAEDPKIWRV 2074
              YLP  VK           LIKDRYG+GSEY VYDEDPK+ +  VSVE  A DP IW+V
Sbjct: 58   SPYLPIFVKEEEVSGDELEELIKDRYGKGSEYVVYDEDPKQDNAAVSVEHLAGDPNIWKV 117

Query: 2073 KCMVGREQQMVLSLMHKYADLQRLGTKMEIISAFTLEHVKGYVYIEADKACDIVEACKGF 1894
            KCMVG+EQQ+VLSLMHKYADLQRLGTKM+IISAFTLEHVKGYVYIEADKACD+VEACKGF
Sbjct: 118  KCMVGKEQQIVLSLMHKYADLQRLGTKMDIISAFTLEHVKGYVYIEADKACDVVEACKGF 177

Query: 1893 FNIYATRMGLVPSNDIPHLLSTRNKPCTISKGTWVRMKNGNYKGDLGQVVDYDEARKRAT 1714
            FNIY+TRMGLVP+ +IPHLLS RNK C +SKGTWVRMK+GNYKGDLGQVVDYD+ RK+AT
Sbjct: 178  FNIYSTRMGLVPNTEIPHLLSIRNKACILSKGTWVRMKSGNYKGDLGQVVDYDDMRKKAT 237

Query: 1713 IKLVPRIDLQAIAKKYGGGVSLKEAAVPAPRLISSQELEHFRSHIEIRRDRHSGDYFEIL 1534
            IKLVPRIDLQAIAKK+GGGVSLKEAAVP+PRLISS ELE FRSHIEIRRDRHSG+ FEIL
Sbjct: 238  IKLVPRIDLQAIAKKFGGGVSLKEAAVPSPRLISSHELEQFRSHIEIRRDRHSGECFEIL 297

Query: 1533 DGLMLKDGFLYKKVSLASIVFWGVQPSKDELLKFTEMTKADEEDVSWLSTVYNVRKKMKS 1354
            DGLMLKDG+LYKKVS+ASIV+WGV+PSKDELLKFTEM+K +EEDVSWLS+VYNVRKK+K 
Sbjct: 298  DGLMLKDGYLYKKVSIASIVYWGVEPSKDELLKFTEMSKPEEEDVSWLSSVYNVRKKIKP 357

Query: 1353 SEAADAKGASELGNGFILHDLVLFGRKGFGV-XXXXXXXXXXXXXXXKEGQEVMTIKSED 1177
            S+ +D KG+SE GN F LHDLVLFGRK FGV                KEGQEV+T+K+E 
Sbjct: 358  SKDSDLKGSSEKGNSFNLHDLVLFGRKAFGVIIDMGKDGTMKVLRGDKEGQEVITVKAEA 417

Query: 1176 IKSHCVDKMFTASDRHRKTIYINDTVKVLKGPLEGREGVVRHMYKGTLFIYDENQEENSG 997
            IKS CVDKMFTASDRHRKTI IND +KVL+GPLEGR+G   HMYKGTLFIYDE+QE NSG
Sbjct: 418  IKSQCVDKMFTASDRHRKTICINDIIKVLEGPLEGRQGTACHMYKGTLFIYDESQEGNSG 477

Query: 996  IFCAKSDFCENITPPKDSSFRKGGNKSSSSFNQSPVRSCEQEDSSYTFSRNRHSESNQPF 817
            IFC KSD CE ITP KD SF K GNK+SSSF+Q PV S EQEDSS TFSRNR  ESNQ F
Sbjct: 478  IFCTKSDLCEKITPAKD-SFGK-GNKASSSFSQDPVISSEQEDSSCTFSRNRRRESNQIF 535

Query: 816  SIGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITVEEQFLSIPNIKRDFAAEMP 637
            S+GQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITV+EQ LS PN+KRD A    
Sbjct: 536  SVGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITVDEQLLSDPNLKRDTAG--- 592

Query: 636  SDIFGTQERFTGGLSGNGEQTVVTSSWDGASSSWQALSTSTL-FGNNNDQKTEQEQGADP 460
                       GGLSGNGEQT+  SSWDG SSSWQ LSTS   F  NNDQK+ QEQGADP
Sbjct: 593  -----------GGLSGNGEQTLGASSWDGGSSSWQDLSTSAFSFSANNDQKSGQEQGADP 641

Query: 459  WGSKVSLAAGDREQGADPWGSHASIVAGDHEGS-DPWGSKLVPVATDTEQGADPWGSKAS 283
            W  +VS  AGD+EQ +DPW S ASI AG   GS DPWGSK    A D    ADPWGSKAS
Sbjct: 642  WAGRVSHVAGDQEQ-SDPWVSKASITAGADGGSADPWGSKASLAARDDGGSADPWGSKAS 700

Query: 282  I 280
            +
Sbjct: 701  L 701



 Score = 96.7 bits (239), Expect(2) = 9e-29
 Identities = 52/103 (50%), Positives = 57/103 (55%), Gaps = 16/103 (15%)
 Frame = -2

Query: 263  KTVLGDSSHSDTAFGSWVKVSSTSGEHNS-WNKSEGGGFEKDGDGWKKPCVKTT------ 105
            KT  G SSHSD  F SW K S+ SGE NS WNK+EG G EKDGDGW KP   ++      
Sbjct: 822  KTTHGGSSHSDKTFDSWAKASTASGEENSVWNKTEGVGCEKDGDGWNKPSASSSFSGRER 881

Query: 104  ---------PPTAKDDKQGADPWGSKVSVTARDDTQGADPWGS 3
                     P  AKD  +G D WGSK SV A  D  G DPW S
Sbjct: 882  GADQWESKVPAAAKDHARGVDAWGSKASV-ANKDQGGEDPWAS 923



 Score = 62.0 bits (149), Expect(2) = 9e-29
 Identities = 44/142 (30%), Positives = 64/142 (45%), Gaps = 24/142 (16%)
 Frame = -1

Query: 636  SDIFGTQERFTGGLSGN----GEQTVVTSSWDGASSSWQALSTSTLFGNNNDQKTEQEQG 469
            +D +G++     G  G+    G +T + +  +G+S+          +G+       +   
Sbjct: 692  ADPWGSKASLPAGDGGSADPWGSKTSLAAGAEGSSAD--------PWGSKASLAAREGGS 743

Query: 468  ADPWGSKVSLAAGDREQGADPWGSHASIVAGDHEGSDPWGSKLVPVATDTEQG------- 310
            ADP G+K SLAAGD    ADPWGS  +    D   +DPWG+KL P A + EQG       
Sbjct: 744  ADPSGNKASLAAGDGGS-ADPWGSKQTPGTRDGGSADPWGTKLTPGAREQEQGVDPWGSS 802

Query: 309  -------------ADPWGSKAS 283
                         ADPWG K +
Sbjct: 803  IAGTTTADNNKPRADPWGGKTT 824



 Score = 90.5 bits (223), Expect(2) = 2e-23
 Identities = 52/107 (48%), Positives = 59/107 (55%), Gaps = 21/107 (19%)
 Frame = -2

Query: 263  KTVLGDSSHSDTAFGSWVKVSSTSGEHNS-WNKSEGGGFE-KDGDGWKKPCVKTTPPT-- 96
            K    +S+HSD AF SWVK SSTSGE NS W K+ GGG   KDGDGW K   KT   T  
Sbjct: 1377 KATPSESNHSDKAFDSWVKASSTSGERNSLWAKTTGGGGSGKDGDGWNKSSTKTISSTLG 1436

Query: 95   -----------------AKDDKQGADPWGSKVSVTARDDTQGADPWG 6
                             ++D  QGADPWGSK S  A+D  + ADPWG
Sbjct: 1437 MISPDQGEGAATWASGSSRDKTQGADPWGSKASPAAKDKGE-ADPWG 1482



 Score = 50.1 bits (118), Expect(2) = 2e-23
 Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
 Frame = -1

Query: 474  QGADPWGSKVSLAAGDREQGAD--PWGSHASIVAGDHE-GSDPWGSKLVPVATDTEQGAD 304
            +G   WG   +    ++++  +   WGS  S    + E G+ PWGS +   +TD EQ AD
Sbjct: 1313 RGRGQWGGSGTATEENQDKSGEFGGWGSGKSWNQKEQERGAGPWGSSVAGASTDKEQNAD 1372

Query: 303  PWGSKASIS 277
            PWGSKA+ S
Sbjct: 1373 PWGSKATPS 1381



 Score = 71.6 bits (174), Expect(2) = 1e-15
 Identities = 45/111 (40%), Positives = 55/111 (49%), Gaps = 7/111 (6%)
 Frame = -1

Query: 594  SGNGEQTVVTSSWDGASSS------WQALSTSTLFGNNNDQKTEQEQGADPWGSKVSLAA 433
            S +GE+  + +   G   S      W   ST T+         +Q +GA  W S  S   
Sbjct: 1398 STSGERNSLWAKTTGGGGSGKDGDGWNKSSTKTISSTLGMISPDQGEGAATWASGSSR-- 1455

Query: 432  GDREQGADPWGSHASIVAGDHEGSDPWGSKLVPVA-TDTEQGADPWGSKAS 283
             D+ QGADPWGS AS  A D   +DPWG KL   A  D  QGAD WGSKA+
Sbjct: 1456 -DKTQGADPWGSKASPAAKDKGEADPWGGKLAASARADPGQGADAWGSKAA 1505



 Score = 43.1 bits (100), Expect(2) = 1e-15
 Identities = 25/63 (39%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
 Frame = -2

Query: 248  DSSHSDTAFGSWVKVSSTSGEHNS-WNKSEGGGFEKDGDGWKKPCVKTTPPTAKDDKQGA 72
            D      A+GS      +S   NS WNK  G G  KDGDGW K    +T       K GA
Sbjct: 1511 DKEQKADAWGSKAAPGDSSNNQNSPWNKVAGEGSGKDGDGWSKAATYST-------KNGA 1563

Query: 71   DPW 63
            D W
Sbjct: 1564 DGW 1566



 Score = 71.6 bits (174), Expect(2) = 2e-15
 Identities = 40/112 (35%), Positives = 55/112 (49%), Gaps = 6/112 (5%)
 Frame = -1

Query: 594  SGNGEQTVVTSSWDGAS-----SSWQALSTSTLFGNNNDQKTEQEQGADPWGSKVSLAAG 430
            + +GE+  V +  +G         W   S S+ F         +E+GAD W SKV  AA 
Sbjct: 843  TASGEENSVWNKTEGVGCEKDGDGWNKPSASSSFSG-------RERGADQWESKVPAAAK 895

Query: 429  DREQGADPWGSHASIVAGDHEGSDPWGSKLVP-VATDTEQGADPWGSKASIS 277
            D  +G D WGS AS+   D  G DPW SK+   V  +  QG DPW S  +++
Sbjct: 896  DHARGVDAWGSKASVANKDQGGEDPWASKVTAGVRAEQGQGTDPWVSNVAVA 947



 Score = 42.4 bits (98), Expect(2) = 2e-15
 Identities = 20/64 (31%), Positives = 32/64 (50%)
 Frame = -2

Query: 203  SSTSGEHNSWNKSEGGGFEKDGDGWKKPCVKTTPPTAKDDKQGADPWGSKVSVTARDDTQ 24
            +S   +++SW+K+ GGG  +DGD W KP  K T  T   +   +  W +    T   + Q
Sbjct: 967  NSVGDQNSSWDKAAGGGSGEDGDSWSKPSCKGT--TVAVNNSSSSSWETAAIGTKSAEKQ 1024

Query: 23   GADP 12
              +P
Sbjct: 1025 EGEP 1028


>gb|ONK75729.1| uncharacterized protein A4U43_C03F19930 [Asparagus officinalis]
          Length = 1710

 Score =  946 bits (2444), Expect = 0.0
 Identities = 491/672 (73%), Positives = 542/672 (80%), Gaps = 2/672 (0%)
 Frame = -1

Query: 2289 RSEGKEFRSAGKPQYLPFLVKXXXXXXXXXXXLIKDRYGRGSEYAVYDEDPKECDDGVSV 2110
            +   K+F+ AGK  YLP  VK           LIKDRYG+GSEY VYDEDPK+ +  VSV
Sbjct: 27   KESSKDFKGAGKSPYLPIFVKEEEVSGDELEELIKDRYGKGSEYVVYDEDPKQDNAAVSV 86

Query: 2109 ELSAEDPKIWRVKCMVGREQQMVLSLMHKYADLQRLGTKMEIISAFTLEHVKGYVYIEAD 1930
            E  A DP IW+VKCMVG+EQQ+VLSLMHKYADLQRLGTKM+IISAFTLEHVKGYVYIEAD
Sbjct: 87   EHLAGDPNIWKVKCMVGKEQQIVLSLMHKYADLQRLGTKMDIISAFTLEHVKGYVYIEAD 146

Query: 1929 KACDIVEACKGFFNIYATRMGLVPSNDIPHLLSTRNKPCTISKGTWVRMKNGNYKGDLGQ 1750
            KACD+VEACKGFFNIY+TRMGLVP+ +IPHLLS RNK C +SKGTWVRMK+GNYKGDLGQ
Sbjct: 147  KACDVVEACKGFFNIYSTRMGLVPNTEIPHLLSIRNKACILSKGTWVRMKSGNYKGDLGQ 206

Query: 1749 VVDYDEARKRATIKLVPRIDLQAIAKKYGGGVSLKEAAVPAPRLISSQELEHFRSHIEIR 1570
            VVDYD+ RK+ATIKLVPRIDLQAIAKK+GGGVSLKEAAVP+PRLISS ELE FRSHIEIR
Sbjct: 207  VVDYDDMRKKATIKLVPRIDLQAIAKKFGGGVSLKEAAVPSPRLISSHELEQFRSHIEIR 266

Query: 1569 RDRHSGDYFEILDGLMLKDGFLYKKVSLASIVFWGVQPSKDELLKFTEMTKADEEDVSWL 1390
            RDRHSG+ FEILDGLMLKDG+LYKKVS+ASIV+WGV+PSKDELLKFTEM+K +EEDVSWL
Sbjct: 267  RDRHSGECFEILDGLMLKDGYLYKKVSIASIVYWGVEPSKDELLKFTEMSKPEEEDVSWL 326

Query: 1389 STVYNVRKKMKSSEAADAKGASELGNGFILHDLVLFGRKGFGV-XXXXXXXXXXXXXXXK 1213
            S+VYNVRKK+K S+ +D KG+SE GN F LHDLVLFGRK FGV                K
Sbjct: 327  SSVYNVRKKIKPSKDSDLKGSSEKGNSFNLHDLVLFGRKAFGVIIDMGKDGTMKVLRGDK 386

Query: 1212 EGQEVMTIKSEDIKSHCVDKMFTASDRHRKTIYINDTVKVLKGPLEGREGVVRHMYKGTL 1033
            EGQEV+T+K+E IKS CVDKMFTASDRHRKTI IND +KVL+GPLEGR+G   HMYKGTL
Sbjct: 387  EGQEVITVKAEAIKSQCVDKMFTASDRHRKTICINDIIKVLEGPLEGRQGTACHMYKGTL 446

Query: 1032 FIYDENQEENSGIFCAKSDFCENITPPKDSSFRKGGNKSSSSFNQSPVRSCEQEDSSYTF 853
            FIYDE+QE NSGIFC KSD CE ITP KD SF K GNK+SSSF+Q PV S EQEDSS  F
Sbjct: 447  FIYDESQEGNSGIFCTKSDLCEKITPAKD-SFGK-GNKASSSFSQDPVISSEQEDSS--F 502

Query: 852  SRNRHSESNQPFSIGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITVEEQFLSI 673
            SRNR  ESNQ FS+GQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITV+EQ LS 
Sbjct: 503  SRNRRRESNQIFSVGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITVDEQLLSD 562

Query: 672  PNIKRDFAAEMPSDIFGTQERFTGGLSGNGEQTVVTSSWDGASSSWQALSTSTL-FGNNN 496
            PN+KRD A               GGLSGNGEQT+  SSWDG SSSWQ LSTS   F  NN
Sbjct: 563  PNLKRDTAG--------------GGLSGNGEQTLGASSWDGGSSSWQDLSTSAFSFSANN 608

Query: 495  DQKTEQEQGADPWGSKVSLAAGDREQGADPWGSHASIVAGDHEGSDPWGSKLVPVATDTE 316
            DQK+ QEQGADPW  +VS  AGD+EQ +DPW S ASI AGD   +DPWGSK    A D  
Sbjct: 609  DQKSGQEQGADPWAGRVSHVAGDQEQ-SDPWVSKASITAGDGGSADPWGSKASLAARDDG 667

Query: 315  QGADPWGSKASI 280
              ADPWGSKAS+
Sbjct: 668  GSADPWGSKASL 679



 Score = 96.7 bits (239), Expect(2) = 2e-31
 Identities = 52/103 (50%), Positives = 57/103 (55%), Gaps = 16/103 (15%)
 Frame = -2

Query: 263  KTVLGDSSHSDTAFGSWVKVSSTSGEHNS-WNKSEGGGFEKDGDGWKKPCVKTT------ 105
            KT  G SSHSD  F SW K S+ SGE NS WNK+EG G EKDGDGW KP   ++      
Sbjct: 799  KTTHGGSSHSDKTFDSWAKASTASGEENSVWNKTEGVGCEKDGDGWNKPSASSSFSGRER 858

Query: 104  ---------PPTAKDDKQGADPWGSKVSVTARDDTQGADPWGS 3
                     P  AKD  +G D WGSK SV A  D  G DPW S
Sbjct: 859  GADQWESKVPAAAKDHARGVDAWGSKASV-ANKDQGGEDPWAS 900



 Score = 70.9 bits (172), Expect(2) = 2e-31
 Identities = 42/119 (35%), Positives = 59/119 (49%), Gaps = 4/119 (3%)
 Frame = -1

Query: 636 SDIFGTQERFTGGLSGN----GEQTVVTSSWDGASSSWQALSTSTLFGNNNDQKTEQEQG 469
           +D +G++     G  G+    G +T + +    ++  W         G+       +   
Sbjct: 670 ADPWGSKASLPAGDGGSADPWGSKTSLAAGEGSSADPW---------GSKASLAAREGGS 720

Query: 468 ADPWGSKVSLAAGDREQGADPWGSHASIVAGDHEGSDPWGSKLVPVATDTEQGADPWGS 292
           ADP G+K SLAAGD    ADPWGS  +    D   +DPWG+KL P A + EQG DPWGS
Sbjct: 721 ADPSGNKASLAAGDGGS-ADPWGSKQTPGTRDGGSADPWGTKLTPGAREQEQGVDPWGS 778



 Score = 87.0 bits (214), Expect(2) = 2e-22
 Identities = 53/125 (42%), Positives = 59/125 (47%), Gaps = 38/125 (30%)
 Frame = -2

Query: 263  KTVLGDSSHSDTAFGSWVKVSSTSGEHNS-WNKSEGGGFE-KDGDGWKKPCVKTTPPT-- 96
            K    +S+HSD AF SWVK SSTSGE NS W K+ GGG   KDGDGW K   KT   T  
Sbjct: 1354 KATPSESNHSDKAFDSWVKASSTSGERNSLWAKTTGGGGSGKDGDGWNKSSTKTISSTLG 1413

Query: 95   ----------------------------------AKDDKQGADPWGSKVSVTARDDTQGA 18
                                              A  DK  ADPWG K++ +ARD  QGA
Sbjct: 1414 MISPDQGEGAATWASGSSRDKTQGADPWGSKASPAAKDKGEADPWGGKLAASARDPGQGA 1473

Query: 17   DPWGS 3
            D WGS
Sbjct: 1474 DAWGS 1478



 Score = 50.1 bits (118), Expect(2) = 2e-22
 Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
 Frame = -1

Query: 474  QGADPWGSKVSLAAGDREQGAD--PWGSHASIVAGDHE-GSDPWGSKLVPVATDTEQGAD 304
            +G   WG   +    ++++  +   WGS  S    + E G+ PWGS +   +TD EQ AD
Sbjct: 1290 RGRGQWGGSGTATEENQDKSGEFGGWGSGKSWNQKEQERGAGPWGSSVAGASTDKEQNAD 1349

Query: 303  PWGSKASIS 277
            PWGSKA+ S
Sbjct: 1350 PWGSKATPS 1358



 Score = 75.9 bits (185), Expect(2) = 5e-17
 Identities = 45/110 (40%), Positives = 55/110 (50%), Gaps = 6/110 (5%)
 Frame = -1

Query: 594  SGNGEQTVVTSSWDGASSS------WQALSTSTLFGNNNDQKTEQEQGADPWGSKVSLAA 433
            S +GE+  + +   G   S      W   ST T+         +Q +GA  W S  S   
Sbjct: 1375 STSGERNSLWAKTTGGGGSGKDGDGWNKSSTKTISSTLGMISPDQGEGAATWASGSSR-- 1432

Query: 432  GDREQGADPWGSHASIVAGDHEGSDPWGSKLVPVATDTEQGADPWGSKAS 283
             D+ QGADPWGS AS  A D   +DPWG KL   A D  QGAD WGSKA+
Sbjct: 1433 -DKTQGADPWGSKASPAAKDKGEADPWGGKLAASARDPGQGADAWGSKAA 1481



 Score = 43.1 bits (100), Expect(2) = 5e-17
 Identities = 25/63 (39%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
 Frame = -2

Query: 248  DSSHSDTAFGSWVKVSSTSGEHNS-WNKSEGGGFEKDGDGWKKPCVKTTPPTAKDDKQGA 72
            D      A+GS      +S   NS WNK  G G  KDGDGW K    +T       K GA
Sbjct: 1487 DKEQKADAWGSKAAPGDSSNNQNSPWNKVAGEGSGKDGDGWSKAATYST-------KNGA 1539

Query: 71   DPW 63
            D W
Sbjct: 1540 DGW 1542



 Score = 71.6 bits (174), Expect(2) = 2e-15
 Identities = 40/112 (35%), Positives = 55/112 (49%), Gaps = 6/112 (5%)
 Frame = -1

Query: 594  SGNGEQTVVTSSWDGAS-----SSWQALSTSTLFGNNNDQKTEQEQGADPWGSKVSLAAG 430
            + +GE+  V +  +G         W   S S+ F         +E+GAD W SKV  AA 
Sbjct: 820  TASGEENSVWNKTEGVGCEKDGDGWNKPSASSSFSG-------RERGADQWESKVPAAAK 872

Query: 429  DREQGADPWGSHASIVAGDHEGSDPWGSKLVP-VATDTEQGADPWGSKASIS 277
            D  +G D WGS AS+   D  G DPW SK+   V  +  QG DPW S  +++
Sbjct: 873  DHARGVDAWGSKASVANKDQGGEDPWASKVTAGVRAEQGQGTDPWVSNVAVA 924



 Score = 42.4 bits (98), Expect(2) = 2e-15
 Identities = 20/64 (31%), Positives = 32/64 (50%)
 Frame = -2

Query: 203  SSTSGEHNSWNKSEGGGFEKDGDGWKKPCVKTTPPTAKDDKQGADPWGSKVSVTARDDTQ 24
            +S   +++SW+K+ GGG  +DGD W KP  K T  T   +   +  W +    T   + Q
Sbjct: 944  NSVGDQNSSWDKAAGGGSGEDGDSWSKPSCKGT--TVAVNNSSSSSWETAAIGTKSAEKQ 1001

Query: 23   GADP 12
              +P
Sbjct: 1002 EGEP 1005


>ref|XP_010933206.1| PREDICTED: protein RNA-directed DNA methylation 3 isoform X3 [Elaeis
            guineensis]
          Length = 2067

 Score =  739 bits (1909), Expect = 0.0
 Identities = 402/772 (52%), Positives = 503/772 (65%), Gaps = 18/772 (2%)
 Frame = -1

Query: 2547 MAVKEKGKQIAGKA---QAXXXXXXXXXXXXXXXXGPGDQRRKRRAGVLQFFXXXXXXXX 2377
            MA+K KGKQ+AGKA    A                  G +R+K+R GVLQFF        
Sbjct: 1    MALKGKGKQVAGKALDATAASSSSGKRKKPAAEEEASGGRRKKKRPGVLQFFDDAAVDAD 60

Query: 2376 XXXXXXXXXXXXXXXXXXXXXXXDFSKGGRSEGKEFRSAGKPQYLPFLVKXXXXXXXXXX 2197
                                    F    +S  ++ R  GK   +PF +K          
Sbjct: 61   SDDEDEDLDLGEEDADLD------FMDASKSGNEDIRPVGKSHPVPFFLKEEELSGDELE 114

Query: 2196 XLIKDRYGRGSEYAVYDEDPKECDDGVSVELSAEDPKIWRVKCMVGREQQMVLSLMHKYA 2017
             LIKDRYG GSE+ VY+ED KE DD +S   S +DP +WRVKCM GRE+Q+    M KY 
Sbjct: 115  ALIKDRYGHGSEFVVYNEDSKERDDRISEVDSLKDPTVWRVKCMGGRERQIAFCFMQKYI 174

Query: 2016 DLQRLGTKMEIISAFTLEHVKGYVYIEADKACDIVEACKGFFNIYATRMGLVPSNDIPHL 1837
            DL   G+KM+IISAF L+HVKGYV+IEADK CDI+EACKGF+++Y++++  VP +++P L
Sbjct: 175  DLNNYGSKMQIISAFALDHVKGYVFIEADKECDIIEACKGFYSVYSSKINRVPGSEVPQL 234

Query: 1836 LSTRNKPCTISKGTWVRMKNGNYKGDLGQVVDYDEARKRATIKLVPRIDLQAIAKKYGGG 1657
             S+R+K C +S+G+WVRMK+G YKGDL QVV  D+ +K+  +KL+PR+DLQAI+KK+GGG
Sbjct: 235  FSSRSKSCEVSEGSWVRMKSGKYKGDLAQVVAVDDGQKKVMVKLIPRVDLQAISKKFGGG 294

Query: 1656 VSLKEAAVPAPRLISSQELEHFRSHIEIRRDRHSGDYFEILDGLMLKDGFLYKKVSLASI 1477
            +SLK+AAVPAPRLISS ELE FR HIE+RRDR +G+ F+ILDGLMLKDGFLYK+VS+ S+
Sbjct: 295  ISLKQAAVPAPRLISSHELEMFRPHIEVRRDRQTGEIFDILDGLMLKDGFLYKRVSIGSV 354

Query: 1476 VFWGVQPSKDELLKFTEMTKADEEDVSWLSTVYNVRKKMKSSEAADAKGASELGNGFILH 1297
            + W VQPS  ELLKF+ ++K  +ED++W+S+VY  R KM+ SEAAD K  ++ GNGF LH
Sbjct: 355  ICWAVQPSDMELLKFSNVSKVGDEDLTWVSSVYRGRNKMRLSEAADQKVLAKKGNGFNLH 414

Query: 1296 DLVLFGRKGFGVXXXXXXXXXXXXXXXKEGQEVMTIKSEDIKSHCVDKMFTASDRHRKTI 1117
            D VLFG K FGV                EG EV+T+K +DIKS CVDKMFTASDR+ KTI
Sbjct: 415  DFVLFGHKAFGVIIAVEKDGFRILKGGMEGPEVVTVKVQDIKSACVDKMFTASDRYMKTI 474

Query: 1116 YINDTVKVLKGPLEGREGVVRHMYKGTLFIYDENQEENSGIFCAKSDFCENITPPKDSSF 937
             INDTVKVL+GPL+ R+G+VRHMYKGTLFIYDEN+ ENSG FCAKS  CEN+   K    
Sbjct: 475  SINDTVKVLEGPLQDRQGIVRHMYKGTLFIYDENETENSGFFCAKSASCENLKELK---- 530

Query: 936  RKGGNKSSSSFNQSPVRSCEQEDSSYTFSRNRHSESNQPFSIGQTLRIRKGPLKGYLCRV 757
               G KSS SF Q P+RS E++D S+ F+ +R S+ +Q FSIGQTLRIRKGPLKGYLCRV
Sbjct: 531  ---GEKSSHSFFQPPMRSSEEQDRSHGFNWHRQSDRDQIFSIGQTLRIRKGPLKGYLCRV 587

Query: 756  VRIYRSDVTVKLDSLVKVITVEEQFLSIPNIKRDFAAEMPSDIFGTQERFTGGLSGNGEQ 577
            V +YRSDVTVKLDSLVKVITVE ++LS+PN+KRD +A   S+ FGTQE    GLS  G Q
Sbjct: 588  VGVYRSDVTVKLDSLVKVITVEAEYLSVPNVKRDDSAATTSNTFGTQE----GLSIAG-Q 642

Query: 576  TVVTSSWDGA-----SSSWQALSTSTLFG-NNNDQKTEQEQGADPWGSKV-SLAAGD--- 427
             V    WD +       SWQA   S     +NND K+++   ADPWGSKV S A  D   
Sbjct: 643  HVDNGQWDASVPSFGRGSWQAFPGSNSSDVDNNDHKSDEGHDADPWGSKVLSGARADAWH 702

Query: 426  REQGADPWGSHASIVAGDHEGSDPW-----GSKLVPVATDTEQGADPWGSKA 286
              +  D WG  A       E    W     G K+   A +  + AD W  KA
Sbjct: 703  SSKAMDGWGKAA---GSSGEQDSQWNMTAAGDKVTDQARNCIEDADGWNGKA 751


>ref|XP_010933194.1| PREDICTED: protein RNA-directed DNA methylation 3 isoform X1 [Elaeis
            guineensis]
          Length = 2069

 Score =  739 bits (1909), Expect = 0.0
 Identities = 402/772 (52%), Positives = 503/772 (65%), Gaps = 18/772 (2%)
 Frame = -1

Query: 2547 MAVKEKGKQIAGKA---QAXXXXXXXXXXXXXXXXGPGDQRRKRRAGVLQFFXXXXXXXX 2377
            MA+K KGKQ+AGKA    A                  G +R+K+R GVLQFF        
Sbjct: 1    MALKGKGKQVAGKALDATAASSSSGKRKKPAAEEEASGGRRKKKRPGVLQFFDDAAVDAD 60

Query: 2376 XXXXXXXXXXXXXXXXXXXXXXXDFSKGGRSEGKEFRSAGKPQYLPFLVKXXXXXXXXXX 2197
                                    F    +S  ++ R  GK   +PF +K          
Sbjct: 61   SDDEDEDLDLGEEDADLVTD----FMDASKSGNEDIRPVGKSHPVPFFLKEEELSGDELE 116

Query: 2196 XLIKDRYGRGSEYAVYDEDPKECDDGVSVELSAEDPKIWRVKCMVGREQQMVLSLMHKYA 2017
             LIKDRYG GSE+ VY+ED KE DD +S   S +DP +WRVKCM GRE+Q+    M KY 
Sbjct: 117  ALIKDRYGHGSEFVVYNEDSKERDDRISEVDSLKDPTVWRVKCMGGRERQIAFCFMQKYI 176

Query: 2016 DLQRLGTKMEIISAFTLEHVKGYVYIEADKACDIVEACKGFFNIYATRMGLVPSNDIPHL 1837
            DL   G+KM+IISAF L+HVKGYV+IEADK CDI+EACKGF+++Y++++  VP +++P L
Sbjct: 177  DLNNYGSKMQIISAFALDHVKGYVFIEADKECDIIEACKGFYSVYSSKINRVPGSEVPQL 236

Query: 1836 LSTRNKPCTISKGTWVRMKNGNYKGDLGQVVDYDEARKRATIKLVPRIDLQAIAKKYGGG 1657
             S+R+K C +S+G+WVRMK+G YKGDL QVV  D+ +K+  +KL+PR+DLQAI+KK+GGG
Sbjct: 237  FSSRSKSCEVSEGSWVRMKSGKYKGDLAQVVAVDDGQKKVMVKLIPRVDLQAISKKFGGG 296

Query: 1656 VSLKEAAVPAPRLISSQELEHFRSHIEIRRDRHSGDYFEILDGLMLKDGFLYKKVSLASI 1477
            +SLK+AAVPAPRLISS ELE FR HIE+RRDR +G+ F+ILDGLMLKDGFLYK+VS+ S+
Sbjct: 297  ISLKQAAVPAPRLISSHELEMFRPHIEVRRDRQTGEIFDILDGLMLKDGFLYKRVSIGSV 356

Query: 1476 VFWGVQPSKDELLKFTEMTKADEEDVSWLSTVYNVRKKMKSSEAADAKGASELGNGFILH 1297
            + W VQPS  ELLKF+ ++K  +ED++W+S+VY  R KM+ SEAAD K  ++ GNGF LH
Sbjct: 357  ICWAVQPSDMELLKFSNVSKVGDEDLTWVSSVYRGRNKMRLSEAADQKVLAKKGNGFNLH 416

Query: 1296 DLVLFGRKGFGVXXXXXXXXXXXXXXXKEGQEVMTIKSEDIKSHCVDKMFTASDRHRKTI 1117
            D VLFG K FGV                EG EV+T+K +DIKS CVDKMFTASDR+ KTI
Sbjct: 417  DFVLFGHKAFGVIIAVEKDGFRILKGGMEGPEVVTVKVQDIKSACVDKMFTASDRYMKTI 476

Query: 1116 YINDTVKVLKGPLEGREGVVRHMYKGTLFIYDENQEENSGIFCAKSDFCENITPPKDSSF 937
             INDTVKVL+GPL+ R+G+VRHMYKGTLFIYDEN+ ENSG FCAKS  CEN+   K    
Sbjct: 477  SINDTVKVLEGPLQDRQGIVRHMYKGTLFIYDENETENSGFFCAKSASCENLKELK---- 532

Query: 936  RKGGNKSSSSFNQSPVRSCEQEDSSYTFSRNRHSESNQPFSIGQTLRIRKGPLKGYLCRV 757
               G KSS SF Q P+RS E++D S+ F+ +R S+ +Q FSIGQTLRIRKGPLKGYLCRV
Sbjct: 533  ---GEKSSHSFFQPPMRSSEEQDRSHGFNWHRQSDRDQIFSIGQTLRIRKGPLKGYLCRV 589

Query: 756  VRIYRSDVTVKLDSLVKVITVEEQFLSIPNIKRDFAAEMPSDIFGTQERFTGGLSGNGEQ 577
            V +YRSDVTVKLDSLVKVITVE ++LS+PN+KRD +A   S+ FGTQE    GLS  G Q
Sbjct: 590  VGVYRSDVTVKLDSLVKVITVEAEYLSVPNVKRDDSAATTSNTFGTQE----GLSIAG-Q 644

Query: 576  TVVTSSWDGA-----SSSWQALSTSTLFG-NNNDQKTEQEQGADPWGSKV-SLAAGD--- 427
             V    WD +       SWQA   S     +NND K+++   ADPWGSKV S A  D   
Sbjct: 645  HVDNGQWDASVPSFGRGSWQAFPGSNSSDVDNNDHKSDEGHDADPWGSKVLSGARADAWH 704

Query: 426  REQGADPWGSHASIVAGDHEGSDPW-----GSKLVPVATDTEQGADPWGSKA 286
              +  D WG  A       E    W     G K+   A +  + AD W  KA
Sbjct: 705  SSKAMDGWGKAA---GSSGEQDSQWNMTAAGDKVTDQARNCIEDADGWNGKA 753


>ref|XP_010933212.1| PREDICTED: protein RNA-directed DNA methylation 3 isoform X4 [Elaeis
            guineensis]
          Length = 2066

 Score =  738 bits (1906), Expect = 0.0
 Identities = 399/772 (51%), Positives = 501/772 (64%), Gaps = 18/772 (2%)
 Frame = -1

Query: 2547 MAVKEKGKQIAGKA---QAXXXXXXXXXXXXXXXXGPGDQRRKRRAGVLQFFXXXXXXXX 2377
            MA+K KGKQ+AGKA    A                  G +R+K+R GVLQFF        
Sbjct: 1    MALKGKGKQVAGKALDATAASSSSGKRKKPAAEEEASGGRRKKKRPGVLQFFDDAAVDAD 60

Query: 2376 XXXXXXXXXXXXXXXXXXXXXXXDFSKGGRSEGKEFRSAGKPQYLPFLVKXXXXXXXXXX 2197
                                    F    +S  ++ R  GK   +PF +K          
Sbjct: 61   SDDEDEDLDLGEEDADLD------FMDASKSGNEDIRPVGKSHPVPFFLKEEELSGDELE 114

Query: 2196 XLIKDRYGRGSEYAVYDEDPKECDDGVSVELSAEDPKIWRVKCMVGREQQMVLSLMHKYA 2017
             LIKDRYG GSE+ VY+ED KE DD +S   S +DP +WRVKCM GRE+Q+    M KY 
Sbjct: 115  ALIKDRYGHGSEFVVYNEDSKERDDRISEVDSLKDPTVWRVKCMGGRERQIAFCFMQKYI 174

Query: 2016 DLQRLGTKMEIISAFTLEHVKGYVYIEADKACDIVEACKGFFNIYATRMGLVPSNDIPHL 1837
            DL   G+KM+IISAF L+HVKGYV+IEADK CDI+EACKGF+++Y++++  VP +++P L
Sbjct: 175  DLNNYGSKMQIISAFALDHVKGYVFIEADKECDIIEACKGFYSVYSSKINRVPGSEVPQL 234

Query: 1836 LSTRNKPCTISKGTWVRMKNGNYKGDLGQVVDYDEARKRATIKLVPRIDLQAIAKKYGGG 1657
             S+R+K C +S+G+WVRMK+G YKGDL QVV  D+ +K+  +KL+PR+DLQAI+KK+GGG
Sbjct: 235  FSSRSKSCEVSEGSWVRMKSGKYKGDLAQVVAVDDGQKKVMVKLIPRVDLQAISKKFGGG 294

Query: 1656 VSLKEAAVPAPRLISSQELEHFRSHIEIRRDRHSGDYFEILDGLMLKDGFLYKKVSLASI 1477
            +SLK+AAVPAPRLISS ELE FR HIE+RRDR +G+ F+ILDGLMLKDGFLYK+VS+ S+
Sbjct: 295  ISLKQAAVPAPRLISSHELEMFRPHIEVRRDRQTGEIFDILDGLMLKDGFLYKRVSIGSV 354

Query: 1476 VFWGVQPSKDELLKFTEMTKADEEDVSWLSTVYNVRKKMKSSEAADAKGASELGNGFILH 1297
            + W VQPS  ELLKF+ ++K  +ED++W+S+VY  R KM+ SEAAD K  ++ GNGF LH
Sbjct: 355  ICWAVQPSDMELLKFSNVSKVGDEDLTWVSSVYRGRNKMRLSEAADQKVLAKKGNGFNLH 414

Query: 1296 DLVLFGRKGFGVXXXXXXXXXXXXXXXKEGQEVMTIKSEDIKSHCVDKMFTASDRHRKTI 1117
            D VLFG K FGV                EG EV+T+K +DIKS CVDKMFTASDR+ KTI
Sbjct: 415  DFVLFGHKAFGVIIAVEKDGFRILKGGMEGPEVVTVKVQDIKSACVDKMFTASDRYMKTI 474

Query: 1116 YINDTVKVLKGPLEGREGVVRHMYKGTLFIYDENQEENSGIFCAKSDFCENITPPKDSSF 937
             INDTVKVL+GPL+ R+G+VRHMYKGTLFIYDEN+ ENSG FCAKS  CEN+   K    
Sbjct: 475  SINDTVKVLEGPLQDRQGIVRHMYKGTLFIYDENETENSGFFCAKSASCENLKELK---- 530

Query: 936  RKGGNKSSSSFNQSPVRSCEQEDSSYTFSRNRHSESNQPFSIGQTLRIRKGPLKGYLCRV 757
               G KSS SF Q P+RS E++D S+ F+ +R S+ +Q FSIGQTLRIRKGPLKGYLCRV
Sbjct: 531  ---GEKSSHSFFQPPMRSSEEQDRSHGFNWHRQSDRDQIFSIGQTLRIRKGPLKGYLCRV 587

Query: 756  VRIYRSDVTVKLDSLVKVITVEEQFLSIPNIKRDFAAEMPSDIFGTQERFTGGLSGNGEQ 577
            V +YRSDVTVKLDSLVKVITVE ++LS+PN+KRD +A   S+ FGTQE  + G      Q
Sbjct: 588  VGVYRSDVTVKLDSLVKVITVEAEYLSVPNVKRDDSAATTSNTFGTQEGLSIG------Q 641

Query: 576  TVVTSSWDGA-----SSSWQALSTSTLFG-NNNDQKTEQEQGADPWGSKV-SLAAGD--- 427
             V    WD +       SWQA   S     +NND K+++   ADPWGSKV S A  D   
Sbjct: 642  HVDNGQWDASVPSFGRGSWQAFPGSNSSDVDNNDHKSDEGHDADPWGSKVLSGARADAWH 701

Query: 426  REQGADPWGSHASIVAGDHEGSDPW-----GSKLVPVATDTEQGADPWGSKA 286
              +  D WG  A       E    W     G K+   A +  + AD W  KA
Sbjct: 702  SSKAMDGWGKAA---GSSGEQDSQWNMTAAGDKVTDQARNCIEDADGWNGKA 750


>ref|XP_010933199.1| PREDICTED: protein RNA-directed DNA methylation 3 isoform X2 [Elaeis
            guineensis]
          Length = 2068

 Score =  738 bits (1906), Expect = 0.0
 Identities = 399/772 (51%), Positives = 501/772 (64%), Gaps = 18/772 (2%)
 Frame = -1

Query: 2547 MAVKEKGKQIAGKA---QAXXXXXXXXXXXXXXXXGPGDQRRKRRAGVLQFFXXXXXXXX 2377
            MA+K KGKQ+AGKA    A                  G +R+K+R GVLQFF        
Sbjct: 1    MALKGKGKQVAGKALDATAASSSSGKRKKPAAEEEASGGRRKKKRPGVLQFFDDAAVDAD 60

Query: 2376 XXXXXXXXXXXXXXXXXXXXXXXDFSKGGRSEGKEFRSAGKPQYLPFLVKXXXXXXXXXX 2197
                                    F    +S  ++ R  GK   +PF +K          
Sbjct: 61   SDDEDEDLDLGEEDADLVTD----FMDASKSGNEDIRPVGKSHPVPFFLKEEELSGDELE 116

Query: 2196 XLIKDRYGRGSEYAVYDEDPKECDDGVSVELSAEDPKIWRVKCMVGREQQMVLSLMHKYA 2017
             LIKDRYG GSE+ VY+ED KE DD +S   S +DP +WRVKCM GRE+Q+    M KY 
Sbjct: 117  ALIKDRYGHGSEFVVYNEDSKERDDRISEVDSLKDPTVWRVKCMGGRERQIAFCFMQKYI 176

Query: 2016 DLQRLGTKMEIISAFTLEHVKGYVYIEADKACDIVEACKGFFNIYATRMGLVPSNDIPHL 1837
            DL   G+KM+IISAF L+HVKGYV+IEADK CDI+EACKGF+++Y++++  VP +++P L
Sbjct: 177  DLNNYGSKMQIISAFALDHVKGYVFIEADKECDIIEACKGFYSVYSSKINRVPGSEVPQL 236

Query: 1836 LSTRNKPCTISKGTWVRMKNGNYKGDLGQVVDYDEARKRATIKLVPRIDLQAIAKKYGGG 1657
             S+R+K C +S+G+WVRMK+G YKGDL QVV  D+ +K+  +KL+PR+DLQAI+KK+GGG
Sbjct: 237  FSSRSKSCEVSEGSWVRMKSGKYKGDLAQVVAVDDGQKKVMVKLIPRVDLQAISKKFGGG 296

Query: 1656 VSLKEAAVPAPRLISSQELEHFRSHIEIRRDRHSGDYFEILDGLMLKDGFLYKKVSLASI 1477
            +SLK+AAVPAPRLISS ELE FR HIE+RRDR +G+ F+ILDGLMLKDGFLYK+VS+ S+
Sbjct: 297  ISLKQAAVPAPRLISSHELEMFRPHIEVRRDRQTGEIFDILDGLMLKDGFLYKRVSIGSV 356

Query: 1476 VFWGVQPSKDELLKFTEMTKADEEDVSWLSTVYNVRKKMKSSEAADAKGASELGNGFILH 1297
            + W VQPS  ELLKF+ ++K  +ED++W+S+VY  R KM+ SEAAD K  ++ GNGF LH
Sbjct: 357  ICWAVQPSDMELLKFSNVSKVGDEDLTWVSSVYRGRNKMRLSEAADQKVLAKKGNGFNLH 416

Query: 1296 DLVLFGRKGFGVXXXXXXXXXXXXXXXKEGQEVMTIKSEDIKSHCVDKMFTASDRHRKTI 1117
            D VLFG K FGV                EG EV+T+K +DIKS CVDKMFTASDR+ KTI
Sbjct: 417  DFVLFGHKAFGVIIAVEKDGFRILKGGMEGPEVVTVKVQDIKSACVDKMFTASDRYMKTI 476

Query: 1116 YINDTVKVLKGPLEGREGVVRHMYKGTLFIYDENQEENSGIFCAKSDFCENITPPKDSSF 937
             INDTVKVL+GPL+ R+G+VRHMYKGTLFIYDEN+ ENSG FCAKS  CEN+   K    
Sbjct: 477  SINDTVKVLEGPLQDRQGIVRHMYKGTLFIYDENETENSGFFCAKSASCENLKELK---- 532

Query: 936  RKGGNKSSSSFNQSPVRSCEQEDSSYTFSRNRHSESNQPFSIGQTLRIRKGPLKGYLCRV 757
               G KSS SF Q P+RS E++D S+ F+ +R S+ +Q FSIGQTLRIRKGPLKGYLCRV
Sbjct: 533  ---GEKSSHSFFQPPMRSSEEQDRSHGFNWHRQSDRDQIFSIGQTLRIRKGPLKGYLCRV 589

Query: 756  VRIYRSDVTVKLDSLVKVITVEEQFLSIPNIKRDFAAEMPSDIFGTQERFTGGLSGNGEQ 577
            V +YRSDVTVKLDSLVKVITVE ++LS+PN+KRD +A   S+ FGTQE  + G      Q
Sbjct: 590  VGVYRSDVTVKLDSLVKVITVEAEYLSVPNVKRDDSAATTSNTFGTQEGLSIG------Q 643

Query: 576  TVVTSSWDGA-----SSSWQALSTSTLFG-NNNDQKTEQEQGADPWGSKV-SLAAGD--- 427
             V    WD +       SWQA   S     +NND K+++   ADPWGSKV S A  D   
Sbjct: 644  HVDNGQWDASVPSFGRGSWQAFPGSNSSDVDNNDHKSDEGHDADPWGSKVLSGARADAWH 703

Query: 426  REQGADPWGSHASIVAGDHEGSDPW-----GSKLVPVATDTEQGADPWGSKA 286
              +  D WG  A       E    W     G K+   A +  + AD W  KA
Sbjct: 704  SSKAMDGWGKAA---GSSGEQDSQWNMTAAGDKVTDQARNCIEDADGWNGKA 752


>ref|XP_008794002.1| PREDICTED: protein RNA-directed DNA methylation 3 [Phoenix
            dactylifera]
          Length = 2039

 Score =  719 bits (1857), Expect = 0.0
 Identities = 395/767 (51%), Positives = 496/767 (64%), Gaps = 13/767 (1%)
 Frame = -1

Query: 2547 MAVKEKGKQIAGKAQAXXXXXXXXXXXXXXXXGPGDQ--RRKRRAGVLQFFXXXXXXXXX 2374
            MA K KGKQ+AGKA                    G    RRK+R GVLQFF         
Sbjct: 1    MASKGKGKQVAGKAPDAAALSSSSGKRKKPAAEAGASGGRRKKRPGVLQFFDDAAVDADS 60

Query: 2373 XXXXXXXXXXXXXXXXXXXXXXDFSKGGRSEGKEFRSAGKPQYLPFLVKXXXXXXXXXXX 2194
                                   F    +S   + R  GK   LPF +K           
Sbjct: 61   DDEDKDLDLEEEDAHLD------FMDASKSVN-DVRPVGKSHPLPFFLKEEELSGDELEA 113

Query: 2193 LIKDRYGRGSEYAVYDEDPKECDDGVSVELSAEDPKIWRVKCMVGREQQMVLSLMHKYAD 2014
            LIKDRYG GSE+ VY+ED KE DD VS   S +DP +WRVKCMVGRE+Q+    M KY D
Sbjct: 114  LIKDRYGHGSEFVVYNEDSKERDDRVSEVDSLKDPSVWRVKCMVGRERQIAFCFMQKYID 173

Query: 2013 LQRLGTKMEIISAFTLEHVKGYVYIEADKACDIVEACKGFFNIYATRMGLVPSNDIPHLL 1834
            L   G K++IISAF L+HVKGYV+IEADK  D+ EACKGF+++Y++++  V  +++P L 
Sbjct: 174  LNNFGNKIQIISAFALDHVKGYVFIEADKEYDVTEACKGFYSVYSSKINRVHGSEVPQLF 233

Query: 1833 STRNKPCTISKGTWVRMKNGNYKGDLGQVVDYDEARKRATIKLVPRIDLQAIAKKYGGGV 1654
            S+R+K C +S+G+WVRMK+G YKGDL QVV  D+ +K+  +KLVPR+DLQAI+KK+GGGV
Sbjct: 234  SSRSKSCEVSEGSWVRMKSGKYKGDLAQVVAVDDGQKKVMVKLVPRVDLQAISKKFGGGV 293

Query: 1653 SLKEAAVPAPRLISSQELEHFRSHIEIRRDRHSGDYFEILDGLMLKDGFLYKKVSLASIV 1474
            SLK+AAVPAPRLISS ELE FR HIE+RRDR +G+ FEILDGLMLKDGFLYK+VS+ S++
Sbjct: 294  SLKQAAVPAPRLISSHELEMFRPHIEVRRDRQTGEIFEILDGLMLKDGFLYKRVSIGSVI 353

Query: 1473 FWGVQPSKDELLKFTEMTKADEEDVSWLSTVYNVRKKMKSSEAADAKGASELGNGFILHD 1294
             WGVQPS  ELLKF+ + K  +E ++W+S+VY+ R KM+ +EAAD +  ++ GNGF LHD
Sbjct: 354  CWGVQPSDMELLKFSSVGKDGDEHLNWVSSVYHGRNKMRPTEAADQQVLAKKGNGFNLHD 413

Query: 1293 LVLFGRKGFGVXXXXXXXXXXXXXXXKEGQEVMTIKSEDIKSHCVDKMFTASDRHRKTIY 1114
             VLFG K FGV                EG EV+T+K +DIKS CVDKMFTASDR+ KTI 
Sbjct: 414  FVLFGHKAFGVIIAVEKDGFRILKGGVEGPEVVTVKIQDIKSACVDKMFTASDRYMKTIS 473

Query: 1113 INDTVKVLKGPLEGREGVVRHMYKGTLFIYDENQEENSGIFCAKSDFCENITPPKDSSFR 934
            INDTVKVL+GPL+ ++G+V+HMYKGTLFIYDEN+ ENSG FCAKS  CEN+   K     
Sbjct: 474  INDTVKVLEGPLQDKQGIVKHMYKGTLFIYDENETENSGFFCAKSASCENMKESK----- 528

Query: 933  KGGNKSSSSFNQSPVRSCEQEDSSYTFSRNRHSESNQPFSIGQTLRIRKGPLKGYLCRVV 754
              G KSS SF+Q+P+ S E++D S+ F+  R +E +Q FSIGQTLRIRKGPLKGYLCRVV
Sbjct: 529  --GEKSSHSFSQAPMGSYEEQDRSHGFNWRRQTERDQVFSIGQTLRIRKGPLKGYLCRVV 586

Query: 753  RIYRSDVTVKLDSLVKVITVEEQFLSIPNIKRDFAAEMPSDIFGTQERFT-GGLSGNGEQ 577
             +YRSDVTVK+DSLVK+ITVE ++LS+PN+KRD +A   S+ FGTQER + G  + NG+ 
Sbjct: 587  GVYRSDVTVKVDSLVKIITVEAEYLSVPNVKRDDSAATTSNPFGTQERLSIGQHAENGQW 646

Query: 576  TVVTSSWDGASSSWQALSTSTLFG-NNNDQKTEQEQGADPWGSKV-SLAAGD---REQGA 412
             V   S+     SWQA   S     +NN  K ++   ADPWGSKV S A  D     +  
Sbjct: 647  DVGVPSF--GRDSWQAFPASNFSDVDNNGHKADEGHDADPWGSKVISGARADAWHSSKAM 704

Query: 411  DPWGSHASIVAGDHEGSDPW-----GSKLVPVATDTEQGADPWGSKA 286
            D WG  AS      E    W     G K+   A +  + AD W  KA
Sbjct: 705  DGWGKAAS---SSGEQDSQWNMTAAGEKVTDQARNCIEDADGWNGKA 748


>ref|XP_020091605.1| protein RNA-directed DNA methylation 3 isoform X3 [Ananas comosus]
          Length = 1714

 Score =  679 bits (1752), Expect = 0.0
 Identities = 381/774 (49%), Positives = 486/774 (62%), Gaps = 19/774 (2%)
 Frame = -1

Query: 2547 MAVKEKGKQIAGK---AQAXXXXXXXXXXXXXXXXGPGDQRRKR-RAGVLQFFXXXXXXX 2380
            MAVK KGKQ+A     A A                     R KR R GVLQFF       
Sbjct: 1    MAVKGKGKQVASSPSSASAKRKNPAAEAAQGSGGAASSRGRAKRGRPGVLQFFDDAAMDA 60

Query: 2379 XXXXXXXXXXXXXXXXXXXXXXXXDFSKGGRSEGKEFRSAGKPQYLPFLVKXXXXXXXXX 2200
                                     F    ++E ++ +   +P +LPF VK         
Sbjct: 61   DDDELESGGEDAEED----------FPDECKAENEDLKGTARPPHLPFFVKEEELSGDEL 110

Query: 2199 XXLIKDRYGRGSEYAVYDEDPKECDDGVSVELSAEDPKIWRVKCMVGREQQMVLSLMHKY 2020
              LIKDRYGR S+Y V+ ED KE  D VS     +DP +W++KCM+GRE+QM    M K+
Sbjct: 111  EELIKDRYGRSSKYVVHAEDSKESGDEVSAADLMKDPTVWKIKCMIGRERQMAFCFMQKF 170

Query: 2019 ADLQRLGTKMEIISAFTLEHVKGYVYIEADKACDIVEACKGFFNIYATRMGLVPSNDIPH 1840
             DL  LG K++I+SAF L+HVKG+V++EADKA D+ EACKGF NIY  R+ LVP +++ H
Sbjct: 171  VDLDCLGNKLQIVSAFALDHVKGFVFVEADKANDVSEACKGFCNIYPGRINLVPPSEVSH 230

Query: 1839 LLSTRNKPCTISKGTWVRMKNGNYKGDLGQVVDYDEARKRATIKLVPRIDLQAIAKKYGG 1660
            LLS+RNK C IS+G+WVRMK+G YKGDL QVV+ D+ RKR  IKL+PRIDLQAI+KK+GG
Sbjct: 231  LLSSRNKSCGISQGSWVRMKSGKYKGDLAQVVNLDDGRKRVMIKLIPRIDLQAISKKFGG 290

Query: 1659 GVSLKEAAVPAPRLISSQELEHFRSHIEIRRDRHSGDYFEILDGLMLKDGFLYKKVSLAS 1480
            G+SLK AAVPAPRLISS EL+ FR  IE RRDR SG+ FE+LDG+MLKDG++YK VS  S
Sbjct: 291  GLSLKHAAVPAPRLISSHELDEFRPLIETRRDRQSGEVFEVLDGMMLKDGYMYKWVSNGS 350

Query: 1479 IVFWGVQPSKDELLKFTEMTKADEEDVSWLSTVYNVRKKMKSSEAADAKGASELGNGFIL 1300
            +VFWGVQPS+ ELLKF+ + K D ED+ W+S+VY+ RKK++ ++ +D    +   N + L
Sbjct: 351  VVFWGVQPSESELLKFSNVNKDDSEDLDWVSSVYSGRKKVRLTDDSDNVATTSRKNEYKL 410

Query: 1299 HDLVLFGRKGFGVXXXXXXXXXXXXXXXKEGQEVMTIKSEDIKSHCVDKMFTASDRHRKT 1120
            HDLVLFG+K FGV                EG  V+T++ +DIKS CVDKMFTA DRH KT
Sbjct: 411  HDLVLFGQKDFGVIVTVEKDGVRILKGGTEGSAVVTLRKQDIKSGCVDKMFTALDRHSKT 470

Query: 1119 IYINDTVKVLKGPLEGREGVVRHMYKGTLFIYDENQEENSGIFCAKSDFCENITPPKDS- 943
            I +ND VKVL+G LEGR+G+V+H+Y+G++FIYDEN+ ENSG FCAKS+ CE I   ++S 
Sbjct: 471  ISVNDIVKVLEGSLEGRQGIVKHLYRGSIFIYDENETENSGFFCAKSESCEKIKKSRESV 530

Query: 942  -SFRKG-GNKSSSSFNQSPVRSCEQEDSSYTFSRNRHSESNQPFSIGQTLRIRKGPLKGY 769
             SF    G+ S+S F++ P  S E +DSS    R R  + +  FSIGQTLRI KGPLKGY
Sbjct: 531  NSFDDNLGDGSASLFSEPPTISFENQDSSSGAGRRRQYDRDSLFSIGQTLRICKGPLKGY 590

Query: 768  LCRVVRIYRSDVTVKLDSLVKVITVEEQFLSIPNIKRDFAAEMPSDIFGTQER-FTGGLS 592
            LCRVVRI+RS+VTVKLDSLVK+ITV+ +FLS+P  KRD +    SD+FGTQE    G  S
Sbjct: 591  LCRVVRIFRSEVTVKLDSLVKIITVDAKFLSVPTRKRDDSTGAASDLFGTQEMPSIGPFS 650

Query: 591  GNG-EQTVVTSSWDG-----ASSSWQALSTSTL-FGNNNDQKTEQEQGADPWGSKVSLAA 433
             +G E     SSWD       S  WQ  S S L    N D KT+     DPWGSKV    
Sbjct: 651  ADGTESQPGRSSWDSPLPSFGSDGWQPFSASKLSAAGNTDNKTDD---VDPWGSKVK--- 704

Query: 432  GDREQGADPWGSHASIVAGDHEGSDPWGSKLVPVAT---DT-EQGADPWGSKAS 283
               +Q AD W ++A+  +GD   S  W       A+   DT +  ++ W +K S
Sbjct: 705  --SDQSADTW-ANAAAPSGDQNSS--WDKSTTNAASGQADTWQNNSNDWSNKGS 753


>ref|XP_020091606.1| protein RNA-directed DNA methylation 3 isoform X4 [Ananas comosus]
          Length = 1705

 Score =  679 bits (1751), Expect = 0.0
 Identities = 381/775 (49%), Positives = 486/775 (62%), Gaps = 20/775 (2%)
 Frame = -1

Query: 2547 MAVKEKGKQIAGK---AQAXXXXXXXXXXXXXXXXGPGDQRRKR-RAGVLQFFXXXXXXX 2380
            MAVK KGKQ+A     A A                     R KR R GVLQFF       
Sbjct: 1    MAVKGKGKQVASSPSSASAKRKNPAAEAAQGSGGAASSRGRAKRGRPGVLQFFDDAAMDA 60

Query: 2379 XXXXXXXXXXXXXXXXXXXXXXXXDFSKGGRSEGKEFRSAGKPQYLPFLVKXXXXXXXXX 2200
                                     F    ++E ++ +   +P +LPF VK         
Sbjct: 61   DDDELESGGEDAEED----------FPDECKAENEDLKGTARPPHLPFFVKEEELSGDEL 110

Query: 2199 XXLIKDRYGRGSEYAVYDEDPKECDDGVSVELSAEDPKIWRVKCMVGREQQMVLSLMHKY 2020
              LIKDRYGR S+Y V+ ED KE  D VS     +DP +W++KCM+GRE+QM    M K+
Sbjct: 111  EELIKDRYGRSSKYVVHAEDSKESGDEVSAADLMKDPTVWKIKCMIGRERQMAFCFMQKF 170

Query: 2019 ADLQRLGTKMEIISAFTLEHVKGYVYIEADKACDIVEACKGFFNIYATRMGLVPSNDIPH 1840
             DL  LG K++I+SAF L+HVKG+V++EADKA D+ EACKGF NIY  R+ LVP +++ H
Sbjct: 171  VDLDCLGNKLQIVSAFALDHVKGFVFVEADKANDVSEACKGFCNIYPGRINLVPPSEVSH 230

Query: 1839 LLSTRNKPCTISKGTWVRMKNGNYKGDLGQVVDYDEARKRATIKLVPRIDLQAIAKKYGG 1660
            LLS+RNK C IS+G+WVRMK+G YKGDL QVV+ D+ RKR  IKL+PRIDLQAI+KK+GG
Sbjct: 231  LLSSRNKSCGISQGSWVRMKSGKYKGDLAQVVNLDDGRKRVMIKLIPRIDLQAISKKFGG 290

Query: 1659 GVSLKEAAVPAPRLISSQELEHFRSHIEIRRDRHSGDYFEILDGLMLKDGFLYKKVSLAS 1480
            G+SLK AAVPAPRLISS EL+ FR  IE RRDR SG+ FE+LDG+MLKDG++YK VS  S
Sbjct: 291  GLSLKHAAVPAPRLISSHELDEFRPLIETRRDRQSGEVFEVLDGMMLKDGYMYKWVSNGS 350

Query: 1479 IVFWGVQPSKDELLKFTEMTKADEEDVSWLSTVYNVRKKMKSSEAADAKGASELGNGFIL 1300
            +VFWGVQPS+ ELLKF+ + K D ED+ W+S+VY+ RKK++ ++ +D    +   N + L
Sbjct: 351  VVFWGVQPSESELLKFSNVNKDDSEDLDWVSSVYSGRKKVRLTDDSDNVATTSRKNEYKL 410

Query: 1299 HDLVLFGRKGFGVXXXXXXXXXXXXXXXKEGQEVMTIKSEDIKSHCVDKMFTASDRHRKT 1120
            HDLVLFG+K FGV                EG  V+T++ +DIKS CVDKMFTA DRH KT
Sbjct: 411  HDLVLFGQKDFGVIVTVEKDGVRILKGGTEGSAVVTLRKQDIKSGCVDKMFTALDRHSKT 470

Query: 1119 IYINDTVKVLKGPLEGREGVVRHMYKGTLFIYDENQEENSGIFCAKSDFCENITPPKDS- 943
            I +ND VKVL+G LEGR+G+V+H+Y+G++FIYDEN+ ENSG FCAKS+ CE I   ++S 
Sbjct: 471  ISVNDIVKVLEGSLEGRQGIVKHLYRGSIFIYDENETENSGFFCAKSESCEKIKKSRESV 530

Query: 942  -SFRKG--GNKSSSSFNQSPVRSCEQEDSSYTFSRNRHSESNQPFSIGQTLRIRKGPLKG 772
             SF     G+ S+S F++ P  S E +DSS    R R  + +  FSIGQTLRI KGPLKG
Sbjct: 531  NSFDDNLQGDGSASLFSEPPTISFENQDSSSGAGRRRQYDRDSLFSIGQTLRICKGPLKG 590

Query: 771  YLCRVVRIYRSDVTVKLDSLVKVITVEEQFLSIPNIKRDFAAEMPSDIFGTQER-FTGGL 595
            YLCRVVRI+RS+VTVKLDSLVK+ITV+ +FLS+P  KRD +    SD+FGTQE    G  
Sbjct: 591  YLCRVVRIFRSEVTVKLDSLVKIITVDAKFLSVPTRKRDDSTGAASDLFGTQEMPSIGPF 650

Query: 594  SGNG-EQTVVTSSWDG-----ASSSWQALSTSTL-FGNNNDQKTEQEQGADPWGSKVSLA 436
            S +G E     SSWD       S  WQ  S S L    N D KT+     DPWGSKV   
Sbjct: 651  SADGTESQPGRSSWDSPLPSFGSDGWQPFSASKLSAAGNTDNKTDD---VDPWGSKVK-- 705

Query: 435  AGDREQGADPWGSHASIVAGDHEGSDPWGSKLVPVAT---DT-EQGADPWGSKAS 283
                +Q AD W ++A+  +GD   S  W       A+   DT +  ++ W +K S
Sbjct: 706  ---SDQSADTW-ANAAAPSGDQNSS--WDKSTTNAASGQADTWQNNSNDWSNKGS 754


>ref|XP_020091604.1| protein RNA-directed DNA methylation 3 isoform X2 [Ananas comosus]
          Length = 1714

 Score =  679 bits (1751), Expect = 0.0
 Identities = 381/775 (49%), Positives = 486/775 (62%), Gaps = 20/775 (2%)
 Frame = -1

Query: 2547 MAVKEKGKQIAGK---AQAXXXXXXXXXXXXXXXXGPGDQRRKR-RAGVLQFFXXXXXXX 2380
            MAVK KGKQ+A     A A                     R KR R GVLQFF       
Sbjct: 1    MAVKGKGKQVASSPSSASAKRKNPAAEAAQGSGGAASSRGRAKRGRPGVLQFFDDAAMDA 60

Query: 2379 XXXXXXXXXXXXXXXXXXXXXXXXDFSKGGRSEGKEFRSAGKPQYLPFLVKXXXXXXXXX 2200
                                     F    ++E ++ +   +P +LPF VK         
Sbjct: 61   DDDELESGGEDAEED----------FPDECKAENEDLKGTARPPHLPFFVKEEELSGDEL 110

Query: 2199 XXLIKDRYGRGSEYAVYDEDPKECDDGVSVELSAEDPKIWRVKCMVGREQQMVLSLMHKY 2020
              LIKDRYGR S+Y V+ ED KE  D VS     +DP +W++KCM+GRE+QM    M K+
Sbjct: 111  EELIKDRYGRSSKYVVHAEDSKESGDEVSAADLMKDPTVWKIKCMIGRERQMAFCFMQKF 170

Query: 2019 ADLQRLGTKMEIISAFTLEHVKGYVYIEADKACDIVEACKGFFNIYATRMGLVPSNDIPH 1840
             DL  LG K++I+SAF L+HVKG+V++EADKA D+ EACKGF NIY  R+ LVP +++ H
Sbjct: 171  VDLDCLGNKLQIVSAFALDHVKGFVFVEADKANDVSEACKGFCNIYPGRINLVPPSEVSH 230

Query: 1839 LLSTRNKPCTISKGTWVRMKNGNYKGDLGQVVDYDEARKRATIKLVPRIDLQAIAKKYGG 1660
            LLS+RNK C IS+G+WVRMK+G YKGDL QVV+ D+ RKR  IKL+PRIDLQAI+KK+GG
Sbjct: 231  LLSSRNKSCGISQGSWVRMKSGKYKGDLAQVVNLDDGRKRVMIKLIPRIDLQAISKKFGG 290

Query: 1659 GVSLKEAAVPAPRLISSQELEHFRSHIEIRRDRHSGDYFEILDGLMLKDGFLYKKVSLAS 1480
            G+SLK AAVPAPRLISS EL+ FR  IE RRDR SG+ FE+LDG+MLKDG++YK VS  S
Sbjct: 291  GLSLKHAAVPAPRLISSHELDEFRPLIETRRDRQSGEVFEVLDGMMLKDGYMYKWVSNGS 350

Query: 1479 IVFWGVQPSKDELLKFTEMTKADEEDVSWLSTVYNVRKKMKSSEAADAKGASELGNGFIL 1300
            +VFWGVQPS+ ELLKF+ + K D ED+ W+S+VY+ RKK++ ++ +D    +   N + L
Sbjct: 351  VVFWGVQPSESELLKFSNVNKDDSEDLDWVSSVYSGRKKVRLTDDSDNVATTSRKNEYKL 410

Query: 1299 HDLVLFGRKGFGVXXXXXXXXXXXXXXXKEGQEVMTIKSEDIKSHCVDKMFTASDRHRKT 1120
            HDLVLFG+K FGV                EG  V+T++ +DIKS CVDKMFTA DRH KT
Sbjct: 411  HDLVLFGQKDFGVIVTVEKDGVRILKGGTEGSAVVTLRKQDIKSGCVDKMFTALDRHSKT 470

Query: 1119 IYINDTVKVLKGPLEGREGVVRHMYKGTLFIYDENQEENSGIFCAKSDFCENITPPKDS- 943
            I +ND VKVL+G LEGR+G+V+H+Y+G++FIYDEN+ ENSG FCAKS+ CE I   ++S 
Sbjct: 471  ISVNDIVKVLEGSLEGRQGIVKHLYRGSIFIYDENETENSGFFCAKSESCEKIKKSRESV 530

Query: 942  -SFRKG--GNKSSSSFNQSPVRSCEQEDSSYTFSRNRHSESNQPFSIGQTLRIRKGPLKG 772
             SF     G+ S+S F++ P  S E +DSS    R R  + +  FSIGQTLRI KGPLKG
Sbjct: 531  NSFDDNLQGDGSASLFSEPPTISFENQDSSSGAGRRRQYDRDSLFSIGQTLRICKGPLKG 590

Query: 771  YLCRVVRIYRSDVTVKLDSLVKVITVEEQFLSIPNIKRDFAAEMPSDIFGTQER-FTGGL 595
            YLCRVVRI+RS+VTVKLDSLVK+ITV+ +FLS+P  KRD +    SD+FGTQE    G  
Sbjct: 591  YLCRVVRIFRSEVTVKLDSLVKIITVDAKFLSVPTRKRDDSTGAASDLFGTQEMPSIGPF 650

Query: 594  SGNG-EQTVVTSSWDG-----ASSSWQALSTSTL-FGNNNDQKTEQEQGADPWGSKVSLA 436
            S +G E     SSWD       S  WQ  S S L    N D KT+     DPWGSKV   
Sbjct: 651  SADGTESQPGRSSWDSPLPSFGSDGWQPFSASKLSAAGNTDNKTDD---VDPWGSKVK-- 705

Query: 435  AGDREQGADPWGSHASIVAGDHEGSDPWGSKLVPVAT---DT-EQGADPWGSKAS 283
                +Q AD W ++A+  +GD   S  W       A+   DT +  ++ W +K S
Sbjct: 706  ---SDQSADTW-ANAAAPSGDQNSS--WDKSTTNAASGQADTWQNNSNDWSNKGS 754


>ref|XP_020091602.1| protein RNA-directed DNA methylation 3 isoform X1 [Ananas comosus]
          Length = 1715

 Score =  679 bits (1751), Expect = 0.0
 Identities = 381/775 (49%), Positives = 486/775 (62%), Gaps = 20/775 (2%)
 Frame = -1

Query: 2547 MAVKEKGKQIAGK---AQAXXXXXXXXXXXXXXXXGPGDQRRKR-RAGVLQFFXXXXXXX 2380
            MAVK KGKQ+A     A A                     R KR R GVLQFF       
Sbjct: 1    MAVKGKGKQVASSPSSASAKRKNPAAEAAQGSGGAASSRGRAKRGRPGVLQFFDDAAMDA 60

Query: 2379 XXXXXXXXXXXXXXXXXXXXXXXXDFSKGGRSEGKEFRSAGKPQYLPFLVKXXXXXXXXX 2200
                                     F    ++E ++ +   +P +LPF VK         
Sbjct: 61   DDDELESGGEDAEED----------FPDECKAENEDLKGTARPPHLPFFVKEEELSGDEL 110

Query: 2199 XXLIKDRYGRGSEYAVYDEDPKECDDGVSVELSAEDPKIWRVKCMVGREQQMVLSLMHKY 2020
              LIKDRYGR S+Y V+ ED KE  D VS     +DP +W++KCM+GRE+QM    M K+
Sbjct: 111  EELIKDRYGRSSKYVVHAEDSKESGDEVSAADLMKDPTVWKIKCMIGRERQMAFCFMQKF 170

Query: 2019 ADLQRLGTKMEIISAFTLEHVKGYVYIEADKACDIVEACKGFFNIYATRMGLVPSNDIPH 1840
             DL  LG K++I+SAF L+HVKG+V++EADKA D+ EACKGF NIY  R+ LVP +++ H
Sbjct: 171  VDLDCLGNKLQIVSAFALDHVKGFVFVEADKANDVSEACKGFCNIYPGRINLVPPSEVSH 230

Query: 1839 LLSTRNKPCTISKGTWVRMKNGNYKGDLGQVVDYDEARKRATIKLVPRIDLQAIAKKYGG 1660
            LLS+RNK C IS+G+WVRMK+G YKGDL QVV+ D+ RKR  IKL+PRIDLQAI+KK+GG
Sbjct: 231  LLSSRNKSCGISQGSWVRMKSGKYKGDLAQVVNLDDGRKRVMIKLIPRIDLQAISKKFGG 290

Query: 1659 GVSLKEAAVPAPRLISSQELEHFRSHIEIRRDRHSGDYFEILDGLMLKDGFLYKKVSLAS 1480
            G+SLK AAVPAPRLISS EL+ FR  IE RRDR SG+ FE+LDG+MLKDG++YK VS  S
Sbjct: 291  GLSLKHAAVPAPRLISSHELDEFRPLIETRRDRQSGEVFEVLDGMMLKDGYMYKWVSNGS 350

Query: 1479 IVFWGVQPSKDELLKFTEMTKADEEDVSWLSTVYNVRKKMKSSEAADAKGASELGNGFIL 1300
            +VFWGVQPS+ ELLKF+ + K D ED+ W+S+VY+ RKK++ ++ +D    +   N + L
Sbjct: 351  VVFWGVQPSESELLKFSNVNKDDSEDLDWVSSVYSGRKKVRLTDDSDNVATTSRKNEYKL 410

Query: 1299 HDLVLFGRKGFGVXXXXXXXXXXXXXXXKEGQEVMTIKSEDIKSHCVDKMFTASDRHRKT 1120
            HDLVLFG+K FGV                EG  V+T++ +DIKS CVDKMFTA DRH KT
Sbjct: 411  HDLVLFGQKDFGVIVTVEKDGVRILKGGTEGSAVVTLRKQDIKSGCVDKMFTALDRHSKT 470

Query: 1119 IYINDTVKVLKGPLEGREGVVRHMYKGTLFIYDENQEENSGIFCAKSDFCENITPPKDS- 943
            I +ND VKVL+G LEGR+G+V+H+Y+G++FIYDEN+ ENSG FCAKS+ CE I   ++S 
Sbjct: 471  ISVNDIVKVLEGSLEGRQGIVKHLYRGSIFIYDENETENSGFFCAKSESCEKIKKSRESV 530

Query: 942  -SFRKG--GNKSSSSFNQSPVRSCEQEDSSYTFSRNRHSESNQPFSIGQTLRIRKGPLKG 772
             SF     G+ S+S F++ P  S E +DSS    R R  + +  FSIGQTLRI KGPLKG
Sbjct: 531  NSFDDNLQGDGSASLFSEPPTISFENQDSSSGAGRRRQYDRDSLFSIGQTLRICKGPLKG 590

Query: 771  YLCRVVRIYRSDVTVKLDSLVKVITVEEQFLSIPNIKRDFAAEMPSDIFGTQER-FTGGL 595
            YLCRVVRI+RS+VTVKLDSLVK+ITV+ +FLS+P  KRD +    SD+FGTQE    G  
Sbjct: 591  YLCRVVRIFRSEVTVKLDSLVKIITVDAKFLSVPTRKRDDSTGAASDLFGTQEMPSIGPF 650

Query: 594  SGNG-EQTVVTSSWDG-----ASSSWQALSTSTL-FGNNNDQKTEQEQGADPWGSKVSLA 436
            S +G E     SSWD       S  WQ  S S L    N D KT+     DPWGSKV   
Sbjct: 651  SADGTESQPGRSSWDSPLPSFGSDGWQPFSASKLSAAGNTDNKTDD---VDPWGSKVK-- 705

Query: 435  AGDREQGADPWGSHASIVAGDHEGSDPWGSKLVPVAT---DT-EQGADPWGSKAS 283
                +Q AD W ++A+  +GD   S  W       A+   DT +  ++ W +K S
Sbjct: 706  ---SDQSADTW-ANAAAPSGDQNSS--WDKSTTNAASGQADTWQNNSNDWSNKGS 754


>gb|OAY66311.1| Protein RNA-directed DNA methylation 3 [Ananas comosus]
          Length = 1701

 Score =  671 bits (1732), Expect = 0.0
 Identities = 380/774 (49%), Positives = 484/774 (62%), Gaps = 19/774 (2%)
 Frame = -1

Query: 2547 MAVKEKGKQIAGK---AQAXXXXXXXXXXXXXXXXGPGDQRRKR-RAGVLQFFXXXXXXX 2380
            MAVK KGKQ+A     A A                     R KR R GVLQFF       
Sbjct: 1    MAVKGKGKQVASSPSSASAKRKNPAAEAAQGSGGAASSRGRAKRGRPGVLQFFDDAAMDA 60

Query: 2379 XXXXXXXXXXXXXXXXXXXXXXXXDFSKGGRSEGKEFRSAGKPQYLPFLVKXXXXXXXXX 2200
                                     F    ++E ++ +   +P +LPF VK         
Sbjct: 61   DDDELESGGEDAEED----------FPDECKAENEDLKGTARPPHLPFFVKEEELSGDEL 110

Query: 2199 XXLIKDRYGRGSEYAVYDEDPKECDDGVSVELSAEDPKIWRVKCMVGREQQMVLSLMHKY 2020
              LIKDRYGR S+Y V+ ED KE  D VS     +DP +W++KCM+GRE+QM    M K+
Sbjct: 111  EELIKDRYGRSSKYVVHAEDSKESGDEVSAADLMKDPTVWKIKCMIGRERQMAFCFMQKF 170

Query: 2019 ADLQRLGTKMEIISAFTLEHVKGYVYIEADKACDIVEACKGFFNIYATRMGLVPSNDIPH 1840
             DL  LG K++I+SAF L+HVKG+V++EADKA D+ EACKGF NIY  R+ LVP +++ H
Sbjct: 171  VDLDCLGNKLQIVSAFALDHVKGFVFVEADKANDVSEACKGFCNIYPGRINLVPPSEVSH 230

Query: 1839 LLSTRNKPCTISKGTWVRMKNGNYKGDLGQVVDYDEARKRATIKLVPRIDLQAIAKKYGG 1660
            LLS+RNK C IS+G+WVRMK+G YKGDL QVV+ D+ RKR  IKL+PRIDLQAI+KK+GG
Sbjct: 231  LLSSRNKSCGISQGSWVRMKSGKYKGDLAQVVNLDDGRKRVMIKLIPRIDLQAISKKFGG 290

Query: 1659 GVSLKEAAVPAPRLISSQELEHFRSHIEIRRDRHSGDYFEILDGLMLKDGFLYKKVSLAS 1480
            G+SLK AAVPAPRLISS ELE     IE RRDR SG+ FE+LDG+MLKDG++YK VS  S
Sbjct: 291  GLSLKHAAVPAPRLISSHELEPL---IETRRDRQSGEVFEVLDGMMLKDGYMYKWVSNGS 347

Query: 1479 IVFWGVQPSKDELLKFTEMTKADEEDVSWLSTVYNVRKKMKSSEAADAKGASELGNGFIL 1300
            +VFWGVQPS+ ELLKF+ + K D ED+ W+S+VY+ RKK++ ++ +D    +   N + L
Sbjct: 348  VVFWGVQPSESELLKFSNVNKDDSEDLDWVSSVYSGRKKVRLTDDSDNVATTSRKNEYKL 407

Query: 1299 HDLVLFGRKGFGVXXXXXXXXXXXXXXXKEGQEVMTIKSEDIKSHCVDKMFTASDRHRKT 1120
            HDLVLFG+K FGV                EG  V+T++ +DIKS CVDKMFTA DRH KT
Sbjct: 408  HDLVLFGQKDFGVIVTVEKDGVRILKGGTEGSAVVTLRKQDIKSGCVDKMFTALDRHSKT 467

Query: 1119 IYINDTVKVLKGPLEGREGVVRHMYKGTLFIYDENQEENSGIFCAKSDFCENITPPKDS- 943
            I +ND VKVL+G LEGR+G+V+H+Y+G++FIYDEN+ ENSG FCAKS+ CE I   ++S 
Sbjct: 468  ISVNDIVKVLEGSLEGRQGIVKHLYRGSIFIYDENETENSGFFCAKSESCEKIKKSRESV 527

Query: 942  -SFRKG-GNKSSSSFNQSPVRSCEQEDSSYTFSRNRHSESNQPFSIGQTLRIRKGPLKGY 769
             SF    G+ S+S F++ P  S E +DSS    R R  + +  FSIGQTLRI KGPLKGY
Sbjct: 528  NSFDDNLGDGSASLFSEPPTISFENQDSSSGAGRRRQYDRDSLFSIGQTLRICKGPLKGY 587

Query: 768  LCRVVRIYRSDVTVKLDSLVKVITVEEQFLSIPNIKRDFAAEMPSDIFGTQER-FTGGLS 592
            LCRVVRI+RS+VTVKLDSLVK+ITV+ +FLS+P  KRD +    SD+FGTQE    G  S
Sbjct: 588  LCRVVRIFRSEVTVKLDSLVKIITVDAKFLSVPTRKRDDSTGAASDLFGTQEMPSIGPFS 647

Query: 591  GNG-EQTVVTSSWDG-----ASSSWQALSTSTL-FGNNNDQKTEQEQGADPWGSKVSLAA 433
             +G E     SSWD       S  WQ  S S L    N D KT+     DPWGSKV    
Sbjct: 648  ADGTESQPGRSSWDSPLPSFGSDGWQPFSASKLSAAGNTDNKTDD---VDPWGSKVK--- 701

Query: 432  GDREQGADPWGSHASIVAGDHEGSDPWGSKLVPVAT---DT-EQGADPWGSKAS 283
               +Q AD W ++A+  +GD   S  W       A+   DT +  ++ W +K S
Sbjct: 702  --SDQSADTW-ANAAAPSGDQNSS--WDKSTTNAASGQADTWQNNSNDWSNKGS 750


>ref|XP_020682212.1| protein RNA-directed DNA methylation 3 [Dendrobium catenatum]
 gb|PKU72137.1| Putative transcription elongation factor SPT5 like 1 [Dendrobium
            catenatum]
          Length = 1946

 Score =  640 bits (1650), Expect = 0.0
 Identities = 363/759 (47%), Positives = 462/759 (60%), Gaps = 36/759 (4%)
 Frame = -1

Query: 2547 MAVKEKGKQIAGKAQAXXXXXXXXXXXXXXXXGP-GDQRRKRRAGVLQFFXXXXXXXXXX 2371
            MAVK KGKQIAGK+ A                   G    K+ +GVLQF           
Sbjct: 1    MAVKGKGKQIAGKSPASSASSSGKRRRTRADGESSGAPPPKKPSGVLQFVDDTAADADFE 60

Query: 2370 XXXXXXXXXXXXXXXXXXXXXDFSKGGRSEGKEF-RSAGKPQYLPFLVKXXXXXXXXXXX 2194
                                 D    G  E K   R  GK   +PF +K           
Sbjct: 61   GEEDEDELDWEIDDDFDFELPDI---GTKELKNVTRGPGKSSPVPFFIKEEEMNDDELEE 117

Query: 2193 LIKDRYGRGSEYAVYDEDPKECDDGVSVELSAEDPKIWRVKCMVGREQQMVLSLMHKYAD 2014
             IK+RYG GS +  +DED KECD  + V  + +D  +WRVKCM+GRE+Q    LM K+ D
Sbjct: 118  AIKERYG-GSGFVSFDEDVKECDQSLLVARATKDLSVWRVKCMMGRERQAAFCLMQKFVD 176

Query: 2013 LQRLGTKMEIISAFTLEHVKGYVYIEADKACDIVEACKGFFNIYATRMGLVPSNDIPHLL 1834
            LQ++G K++I S F+L+HVKG+ Y+EAD+AC++ EAC G   +Y +R+ LVP N+ P+LL
Sbjct: 177  LQKIGKKLQIFSVFSLDHVKGFFYVEADRACNVFEACNGLCILYPSRIELVPRNEAPNLL 236

Query: 1833 STRNKPCTISKGTWVRMKNGNYKGDLGQVVDYDEARKRATIKLVPRIDLQAIAKKYGGGV 1654
            S + K C I KG WVRMKNG YKGDL +VV  ++A+KR TIKLVPRIDLQAI+KK+GGG 
Sbjct: 237  SIQRKACGIVKGMWVRMKNGKYKGDLAEVVLVNDAKKRVTIKLVPRIDLQAISKKFGGGT 296

Query: 1653 SLKEAAVPAPRLISSQELEHFRSHIEIRRDRHSGDYFEILDGLMLKDGFLYKKVSLASIV 1474
            SLK AA+PAPRLISS ELE FR HIE+RRDR +G+ FE+LDGLMLKDG+LYKKVS+ S++
Sbjct: 297  SLKAAAIPAPRLISSHELEDFRPHIEVRRDRETGEIFEVLDGLMLKDGYLYKKVSMGSLI 356

Query: 1473 FWGVQPSKDELLKFTEMTKADEEDVSWLSTVYNVRKKM---------------------- 1360
             WGVQP+ DEL+KF E+ K + +DV WLS++Y  R K                       
Sbjct: 357  HWGVQPTSDELMKFEELDKDEVKDVDWLSSIYKARMKKKLPETSHQKNGEKYNQKDGEKS 416

Query: 1359 --KSSEAADAKGASELGNGFILHDLVLFGRKGFGVXXXXXXXXXXXXXXXKEGQEVMTIK 1186
              K  E ++ K A +  NGF + DLVLFG+K  G+                 G EV++I 
Sbjct: 417  NPKVGEKSNQKDADKQINGFDIDDLVLFGKKSCGIIIDKENDTFKVLKGDVNGSEVVSIN 476

Query: 1185 SEDIKSHCVDKMFTASDRHRKTIYINDTVKVLKGPLEGREGVVRHMYKGTLFIYDENQEE 1006
               IK  CVDK+FTA+DR  KTI I+D VKV +GPLEGREG+VRHMYKG LFIYDE Q E
Sbjct: 477  IRVIKKICVDKVFTATDRCMKTISIDDVVKVFEGPLEGREGIVRHMYKGVLFIYDECQSE 536

Query: 1005 NSGIFCAKSDFCENITPPKDSSFRKGGNKSSSSFNQSPVRSCEQEDSSYTFSRNRHSESN 826
            N+G FCA S  C+ +   +D    K   ++  SF QSP+R  EQ+D+S +FSRN+ S S 
Sbjct: 537  NNGFFCANSGICDLVKKSRDLGGGKLSTRAGPSFAQSPIRLSEQDDNSQSFSRNQQSNSL 596

Query: 825  QPFSIGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITVEEQFLSIPNIKRDFAA 646
              FS+GQTLRIRKGPLKGYLCRV+R+ R+D+TVKLDSL K++TV+E+ LS+PN KRD A 
Sbjct: 597  GTFSVGQTLRIRKGPLKGYLCRVIRMRRADITVKLDSLGKLLTVDEKLLSLPNSKRDDAT 656

Query: 645  EMPSDIFGTQE-RFTGGL--SGNG------EQTVVTSSWDGASSSWQALSTSTL-FGNNN 496
             M  ++FG+QE + T GL  +G G      E     SS+     SW   S S+  F   N
Sbjct: 657  AMQCNMFGSQEDQSTDGLLDAGGGLGMDNFEFNAGMSSF--GRDSWNTASCSSFSFPREN 714

Query: 495  DQKTEQEQGADPWGSKVSLAAGDREQGADPWGSHASIVA 379
            D K +Q Q ADPWGSK+S   GD+EQG    G   S+ A
Sbjct: 715  DSK-DQNQIADPWGSKLSSWNGDQEQGPANKGEAPSVSA 752


>ref|XP_009409884.1| PREDICTED: protein RNA-directed DNA methylation 3 isoform X2 [Musa
            acuminata subsp. malaccensis]
          Length = 1808

 Score =  634 bits (1634), Expect = 0.0
 Identities = 357/776 (46%), Positives = 474/776 (61%), Gaps = 23/776 (2%)
 Frame = -1

Query: 2541 VKEKGKQIAGKAQAXXXXXXXXXXXXXXXXGPGD-QRRKRRAGVLQFFXXXXXXXXXXXX 2365
            +K KGKQ+ GK  A                 PG  ++R+RR GVLQFF            
Sbjct: 1    MKGKGKQVVGKVAASAASSSSVKRKTAASENPGGCRKRRRRPGVLQFFDDAAVDADSDCD 60

Query: 2364 XXXXXXXXXXXXXXXXXXXDFSKGGRSEGKEFRSAGKPQYLPFLVKXXXXXXXXXXXLIK 2185
                                F+  G+ E K+    G+  +LPF VK            I 
Sbjct: 61   NKEESEVDEKITDLD-----FADDGKYENKKITGDGQSHHLPFFVKEELSGDELEEL-IN 114

Query: 2184 DRYGRGSEYAVYDEDPKECDDGVSVELSAEDPKIWRVKCMVGREQQMVLSLMHKYADLQR 2005
            DRY  GSE+  Y++D  ECD   S     +D  IW+VKCMVGRE+QM    M KY +L+ 
Sbjct: 115  DRYAHGSEHVTYNDDSAECDVKASEADGMKDVIIWKVKCMVGRERQMTFCFMQKYVELEN 174

Query: 2004 LGTKMEIISAFTLEHVKGYVYIEADKACDIVEACKGFFNIYATRMGLVPSNDIPHLLSTR 1825
            LGTK++I S F LEHVKGYV++EADK  D++EACKGF ++Y++R+ +VP +++PHLL+ R
Sbjct: 175  LGTKLQISSVFALEHVKGYVFVEADKLYDVIEACKGFCSVYSSRINIVPRSEVPHLLAIR 234

Query: 1824 NKPCTISKGTWVRMKNGNYKGDLGQVVDYDEARKRATIKLVPRIDLQAIAKKYGGGVSLK 1645
            NK   +  G  VR+K+G YKGDL QVV  D+ +K+ TIKLVPRIDLQAIAKK+GGG+SLK
Sbjct: 235  NKLPEVCTGKLVRLKSGKYKGDLAQVVAVDDGQKQLTIKLVPRIDLQAIAKKFGGGISLK 294

Query: 1644 EAAVPAPRLISSQELEHFRSHIEIRRDRHSGDYFEILDGLMLKDGFLYKKVSLASIVFWG 1465
             AAVPAPRLISS ELE FR HIE++RDR +G+ FE+LDG+MLKDG+L+KKVS  S++F G
Sbjct: 295  LAAVPAPRLISSHELESFRPHIEVKRDRLTGELFEVLDGMMLKDGYLFKKVSTGSVIFSG 354

Query: 1464 VQPSKDELLKFTEMTKADEEDVSWLSTVYNVRKKMKSSEAADAKGASELGNGFILHDLVL 1285
            VQPS  ELL F+++T    ED++W+S++YN RKK   +E  D + +    N + LHDLVL
Sbjct: 355  VQPSSSELLMFSDVTNNMVEDLNWVSSIYNARKKKPGAEILDDEVSVVTKNDYGLHDLVL 414

Query: 1284 FGRKGFGVXXXXXXXXXXXXXXXKEGQEVMTIKSEDIKSHCVDKMFTASDRHRKTIYIND 1105
            FG+K +GV                EG+ V+T+K +DIK+ CVDKMFTA D  + TI+IND
Sbjct: 415  FGQKHYGVIIAVEKDCFKILKGDIEGENVVTVKIQDIKNSCVDKMFTALDWKKTTIFIND 474

Query: 1104 TVKVLKGPLEGREGVVRHMYKGTLFIYDENQEENSGIFCAKSDFCENITPPKDSSFRKG- 928
             VK+L GPL+GREGVV+HMYKGTLFI+ E + +NSG F  KS  CE +   K+S   K  
Sbjct: 475  IVKILAGPLQGREGVVKHMYKGTLFIHAEYETKNSGFFSVKSVSCEKVKESKNSYGVKAG 534

Query: 927  -GNKSSSSFNQSPVRSCEQEDSSYTFSRNRHSESNQPFSIGQTLRIRKGPLKGYLCRVVR 751
             G ++++SF+QSP+R+ ++E++++  +R   S++ Q FSIGQTLRIR+GPLKGYLCRVV 
Sbjct: 535  KGKEANTSFSQSPIRTFDRENNAHGSTRRGQSDNEQMFSIGQTLRIREGPLKGYLCRVVG 594

Query: 750  IYRSDVTVKLDSLVKVITVEEQFLSIPNIKRDFA------AEMPSDIFGTQERFTGGLSG 589
            IYRSDVTVKLDSLVK+ITV+++ L++P IK D A      A + SD FG          G
Sbjct: 595  IYRSDVTVKLDSLVKLITVKDKSLAVPKIKGDNATGSSDQATISSDHFGLSTACPS--FG 652

Query: 588  NGEQTVVTSSWDG-----ASSSWQALSTS-TLFGNNNDQKTEQEQGADPWGSKVSLAAGD 427
                    SSWD         SWQ  S+S +    NN+ +T+    ADPW S ++ A G 
Sbjct: 653  ETSTPAEKSSWDSVMPSFGRDSWQPFSSSNSSVACNNENQTDHGNEADPW-SNMATATGK 711

Query: 426  REQG-----ADPWGSHASIVAGDHEGSDPWGSKLVPVATD--TEQGA-DPWGSKAS 283
            +  G      D WG           G+DPW        TD  T  GA   WG+ ++
Sbjct: 712  QTSGGSIEITDGWGLGL--------GADPWNKVTYANRTDAPTSDGAIGGWGNSSN 759


>ref|XP_009409883.1| PREDICTED: protein RNA-directed DNA methylation 3 isoform X1 [Musa
            acuminata subsp. malaccensis]
          Length = 1809

 Score =  634 bits (1634), Expect = 0.0
 Identities = 357/776 (46%), Positives = 474/776 (61%), Gaps = 23/776 (2%)
 Frame = -1

Query: 2541 VKEKGKQIAGKAQAXXXXXXXXXXXXXXXXGPGD-QRRKRRAGVLQFFXXXXXXXXXXXX 2365
            +K KGKQ+ GK  A                 PG  ++R+RR GVLQFF            
Sbjct: 1    MKGKGKQVVGKVAASAASSSSVKRKTAASENPGGCRKRRRRPGVLQFFDDAAVDADSDCD 60

Query: 2364 XXXXXXXXXXXXXXXXXXXDFSKGGRSEGKEFRSAGKPQYLPFLVKXXXXXXXXXXXLIK 2185
                                F+  G+ E K+    G+  +LPF VK            I 
Sbjct: 61   NKEESEVDEKITDLVD----FADDGKYENKKITGDGQSHHLPFFVKEELSGDELEEL-IN 115

Query: 2184 DRYGRGSEYAVYDEDPKECDDGVSVELSAEDPKIWRVKCMVGREQQMVLSLMHKYADLQR 2005
            DRY  GSE+  Y++D  ECD   S     +D  IW+VKCMVGRE+QM    M KY +L+ 
Sbjct: 116  DRYAHGSEHVTYNDDSAECDVKASEADGMKDVIIWKVKCMVGRERQMTFCFMQKYVELEN 175

Query: 2004 LGTKMEIISAFTLEHVKGYVYIEADKACDIVEACKGFFNIYATRMGLVPSNDIPHLLSTR 1825
            LGTK++I S F LEHVKGYV++EADK  D++EACKGF ++Y++R+ +VP +++PHLL+ R
Sbjct: 176  LGTKLQISSVFALEHVKGYVFVEADKLYDVIEACKGFCSVYSSRINIVPRSEVPHLLAIR 235

Query: 1824 NKPCTISKGTWVRMKNGNYKGDLGQVVDYDEARKRATIKLVPRIDLQAIAKKYGGGVSLK 1645
            NK   +  G  VR+K+G YKGDL QVV  D+ +K+ TIKLVPRIDLQAIAKK+GGG+SLK
Sbjct: 236  NKLPEVCTGKLVRLKSGKYKGDLAQVVAVDDGQKQLTIKLVPRIDLQAIAKKFGGGISLK 295

Query: 1644 EAAVPAPRLISSQELEHFRSHIEIRRDRHSGDYFEILDGLMLKDGFLYKKVSLASIVFWG 1465
             AAVPAPRLISS ELE FR HIE++RDR +G+ FE+LDG+MLKDG+L+KKVS  S++F G
Sbjct: 296  LAAVPAPRLISSHELESFRPHIEVKRDRLTGELFEVLDGMMLKDGYLFKKVSTGSVIFSG 355

Query: 1464 VQPSKDELLKFTEMTKADEEDVSWLSTVYNVRKKMKSSEAADAKGASELGNGFILHDLVL 1285
            VQPS  ELL F+++T    ED++W+S++YN RKK   +E  D + +    N + LHDLVL
Sbjct: 356  VQPSSSELLMFSDVTNNMVEDLNWVSSIYNARKKKPGAEILDDEVSVVTKNDYGLHDLVL 415

Query: 1284 FGRKGFGVXXXXXXXXXXXXXXXKEGQEVMTIKSEDIKSHCVDKMFTASDRHRKTIYIND 1105
            FG+K +GV                EG+ V+T+K +DIK+ CVDKMFTA D  + TI+IND
Sbjct: 416  FGQKHYGVIIAVEKDCFKILKGDIEGENVVTVKIQDIKNSCVDKMFTALDWKKTTIFIND 475

Query: 1104 TVKVLKGPLEGREGVVRHMYKGTLFIYDENQEENSGIFCAKSDFCENITPPKDSSFRKG- 928
             VK+L GPL+GREGVV+HMYKGTLFI+ E + +NSG F  KS  CE +   K+S   K  
Sbjct: 476  IVKILAGPLQGREGVVKHMYKGTLFIHAEYETKNSGFFSVKSVSCEKVKESKNSYGVKAG 535

Query: 927  -GNKSSSSFNQSPVRSCEQEDSSYTFSRNRHSESNQPFSIGQTLRIRKGPLKGYLCRVVR 751
             G ++++SF+QSP+R+ ++E++++  +R   S++ Q FSIGQTLRIR+GPLKGYLCRVV 
Sbjct: 536  KGKEANTSFSQSPIRTFDRENNAHGSTRRGQSDNEQMFSIGQTLRIREGPLKGYLCRVVG 595

Query: 750  IYRSDVTVKLDSLVKVITVEEQFLSIPNIKRDFA------AEMPSDIFGTQERFTGGLSG 589
            IYRSDVTVKLDSLVK+ITV+++ L++P IK D A      A + SD FG          G
Sbjct: 596  IYRSDVTVKLDSLVKLITVKDKSLAVPKIKGDNATGSSDQATISSDHFGLSTACPS--FG 653

Query: 588  NGEQTVVTSSWDG-----ASSSWQALSTS-TLFGNNNDQKTEQEQGADPWGSKVSLAAGD 427
                    SSWD         SWQ  S+S +    NN+ +T+    ADPW S ++ A G 
Sbjct: 654  ETSTPAEKSSWDSVMPSFGRDSWQPFSSSNSSVACNNENQTDHGNEADPW-SNMATATGK 712

Query: 426  REQG-----ADPWGSHASIVAGDHEGSDPWGSKLVPVATD--TEQGA-DPWGSKAS 283
            +  G      D WG           G+DPW        TD  T  GA   WG+ ++
Sbjct: 713  QTSGGSIEITDGWGLGL--------GADPWNKVTYANRTDAPTSDGAIGGWGNSSN 760


>gb|PAN18741.1| hypothetical protein PAHAL_C02415 [Panicum hallii]
          Length = 1664

 Score =  625 bits (1613), Expect = 0.0
 Identities = 363/798 (45%), Positives = 479/798 (60%), Gaps = 41/798 (5%)
 Frame = -1

Query: 2547 MAVKEKGKQIAGKAQAXXXXXXXXXXXXXXXXGPGDQ---RRKRRAGVLQFFXXXXXXXX 2377
            MAVK KGKQ+A ++                  GP      +R+RRAGVLQF         
Sbjct: 1    MAVKGKGKQVAAESPGPGAGGKRRKGSGDAEAGPSSSSAAKRRRRAGVLQFVDDAAGVDD 60

Query: 2376 XXXXXXXXXXXXXXXXXXXXXXXDFSKGGRSEGKEFRSAGKPQYLPFLVKXXXXXXXXXX 2197
                                    F+ G   +    +   +   LPFLVK          
Sbjct: 61   DYEEDEVLQSEEEASDPDDGF---FTGGEHVQNLSHKRTERSHPLPFLVKEEELSGDELE 117

Query: 2196 XLIKDRYGRGSEYAVYDEDPKECDDGVSVELSAEDPKIWRVKCMVGREQQMVLSLMHKYA 2017
              I+ RY  G +YA      +E DD   ++ + ++P IWRVKCMVGRE+QM    M K+ 
Sbjct: 118  EFIRTRYSNGVKYAADRSYSREDDDIFPIDGALKEPTIWRVKCMVGRERQMAFCFMQKFV 177

Query: 2016 DLQRLGTKMEIISAFTLEHVKGYVYIEADKACDIVEACKGFFNIYATRMGLVPSNDIPHL 1837
            DLQ++GTK+ II+AF L+HV+G+V++EA+KACD+ EACKGF ++YA+R+  VP+ ++P L
Sbjct: 178  DLQKIGTKVPIITAFALDHVRGFVFVEAEKACDVTEACKGFCSVYASRITSVPAAEVPSL 237

Query: 1836 LSTRNKPCTISKGTWVRMKNGNYKGDLGQVVDYDEARKRATIKLVPRIDLQAIAKKYGGG 1657
            LS+R KP  IS+GTWVRMKNGNYKGDL QVV  D  RKR  IK++PR+DL AI+KKYGG 
Sbjct: 238  LSSRTKPFEISRGTWVRMKNGNYKGDLAQVVSVDNGRKRVMIKIIPRVDLHAISKKYGGA 297

Query: 1656 VSLKEAAVPAPRLISSQELEHFRSHIEIRRDRHSGDYFEILDGLMLKDGFLYKKVSLASI 1477
            +SLK AAVPAPRLISSQELE FR HIE++RDR +G+ FE+LDGLM KDGFLYK+V+L+S+
Sbjct: 298  ISLKGAAVPAPRLISSQELEFFRPHIEMKRDRQTGEVFEVLDGLMFKDGFLYKRVALSSL 357

Query: 1476 VFWGVQPSKDELLKFTE--MTKADEEDVSWLSTVYNVRK---------------KMKSSE 1348
            ++WG+QP++ ELLKF+   + +A  +D+ W+S++Y  +K               KMKSS+
Sbjct: 358  IYWGIQPTETELLKFSSSPINRASADDLDWVSSIYGPKKRNIPAKPDIKSSSSSKMKSSK 417

Query: 1347 AADAKGASE---LGNGFILHDLVLFGRKGFGVXXXXXXXXXXXXXXXKEGQEVMTIKSED 1177
             + A  ++E     + F LHDLVLFGRK FGV                EG  V T+K  D
Sbjct: 418  TSKASISTEDFDDNDEFNLHDLVLFGRKDFGVIIAIEKDGFRILKGGPEGSAV-TVKKND 476

Query: 1176 IKSHCVDKMFTASDRHRKTIYINDTVKVLKGPLEGREGVVRHMYKGTLFIYDENQEENSG 997
            IK  CVDKMFTA DR  K + INDTV VL+GP +G++GVV+H+Y G LFIY+E++ EN G
Sbjct: 477  IKKSCVDKMFTAVDRQNKIVSINDTVNVLEGPFQGKQGVVKHLYMGILFIYNESESENCG 536

Query: 996  IFCAKSDFCENITPPKDSSFRKGGNKSSSSFNQSPV---RSCEQEDSSYTFSRNRHSESN 826
             FCA+   CEN+   KD     GG+ + +  N  P+    S EQ +   T  R   S   
Sbjct: 537  FFCAQCGSCENVKKRKD----LGGSTTENLDNPFPMFAEPSYEQNEHRGT-ERPYRSTRE 591

Query: 825  QPFSIGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITVEEQFLSIPNIKRDFAA 646
            Q FSIGQ LRIRKGPLKGYLCRVVRI+R+DVTVKLDSL+K++TV+ +FLS+P  + D  +
Sbjct: 592  QLFSIGQMLRIRKGPLKGYLCRVVRIFRNDVTVKLDSLLKIVTVQAEFLSVPANRGDNLS 651

Query: 645  EMPSDIFGTQERFTGGLSGNGEQTVVTSSWDG-----ASSSWQALSTSTLFGNN------ 499
              P+  FG+Q+  T       E+T    SWD       S SWQ  S+STL   N      
Sbjct: 652  GAPAGNFGSQD--TSFFGSEAEKT----SWDNGLPSFGSDSWQPFSSSTLPVQNTGGESE 705

Query: 498  ND---QKTEQEQGADPWGSKVSLAAGDREQGADPWGSHASIVA-GDHEGSDPWGSKLVPV 331
            ND   +K+  E  +DPWG K     GD     DPWG+  +  A GD   SDPWG+K+ P 
Sbjct: 706  NDPWSKKSSAEGESDPWGKKTD---GD----PDPWGNKVAHSADGD---SDPWGNKVAPS 755

Query: 330  ATDTEQGADPWGSKASIS 277
            A   +  +DPWG+K + S
Sbjct: 756  A---DGDSDPWGNKVAPS 770


>gb|PAN18742.1| hypothetical protein PAHAL_C02415 [Panicum hallii]
          Length = 1679

 Score =  625 bits (1613), Expect = 0.0
 Identities = 363/798 (45%), Positives = 479/798 (60%), Gaps = 41/798 (5%)
 Frame = -1

Query: 2547 MAVKEKGKQIAGKAQAXXXXXXXXXXXXXXXXGPGDQ---RRKRRAGVLQFFXXXXXXXX 2377
            MAVK KGKQ+A ++                  GP      +R+RRAGVLQF         
Sbjct: 1    MAVKGKGKQVAAESPGPGAGGKRRKGSGDAEAGPSSSSAAKRRRRAGVLQFVDDAAGVDD 60

Query: 2376 XXXXXXXXXXXXXXXXXXXXXXXDFSKGGRSEGKEFRSAGKPQYLPFLVKXXXXXXXXXX 2197
                                    F+ G   +    +   +   LPFLVK          
Sbjct: 61   DYEEDEVLQSEEEASDPDDGF---FTGGEHVQNLSHKRTERSHPLPFLVKEEELSGDELE 117

Query: 2196 XLIKDRYGRGSEYAVYDEDPKECDDGVSVELSAEDPKIWRVKCMVGREQQMVLSLMHKYA 2017
              I+ RY  G +YA      +E DD   ++ + ++P IWRVKCMVGRE+QM    M K+ 
Sbjct: 118  EFIRTRYSNGVKYAADRSYSREDDDIFPIDGALKEPTIWRVKCMVGRERQMAFCFMQKFV 177

Query: 2016 DLQRLGTKMEIISAFTLEHVKGYVYIEADKACDIVEACKGFFNIYATRMGLVPSNDIPHL 1837
            DLQ++GTK+ II+AF L+HV+G+V++EA+KACD+ EACKGF ++YA+R+  VP+ ++P L
Sbjct: 178  DLQKIGTKVPIITAFALDHVRGFVFVEAEKACDVTEACKGFCSVYASRITSVPAAEVPSL 237

Query: 1836 LSTRNKPCTISKGTWVRMKNGNYKGDLGQVVDYDEARKRATIKLVPRIDLQAIAKKYGGG 1657
            LS+R KP  IS+GTWVRMKNGNYKGDL QVV  D  RKR  IK++PR+DL AI+KKYGG 
Sbjct: 238  LSSRTKPFEISRGTWVRMKNGNYKGDLAQVVSVDNGRKRVMIKIIPRVDLHAISKKYGGA 297

Query: 1656 VSLKEAAVPAPRLISSQELEHFRSHIEIRRDRHSGDYFEILDGLMLKDGFLYKKVSLASI 1477
            +SLK AAVPAPRLISSQELE FR HIE++RDR +G+ FE+LDGLM KDGFLYK+V+L+S+
Sbjct: 298  ISLKGAAVPAPRLISSQELEFFRPHIEMKRDRQTGEVFEVLDGLMFKDGFLYKRVALSSL 357

Query: 1476 VFWGVQPSKDELLKFTE--MTKADEEDVSWLSTVYNVRK---------------KMKSSE 1348
            ++WG+QP++ ELLKF+   + +A  +D+ W+S++Y  +K               KMKSS+
Sbjct: 358  IYWGIQPTETELLKFSSSPINRASADDLDWVSSIYGPKKRNIPAKPDIKSSSSSKMKSSK 417

Query: 1347 AADAKGASE---LGNGFILHDLVLFGRKGFGVXXXXXXXXXXXXXXXKEGQEVMTIKSED 1177
             + A  ++E     + F LHDLVLFGRK FGV                EG  V T+K  D
Sbjct: 418  TSKASISTEDFDDNDEFNLHDLVLFGRKDFGVIIAIEKDGFRILKGGPEGSAV-TVKKND 476

Query: 1176 IKSHCVDKMFTASDRHRKTIYINDTVKVLKGPLEGREGVVRHMYKGTLFIYDENQEENSG 997
            IK  CVDKMFTA DR  K + INDTV VL+GP +G++GVV+H+Y G LFIY+E++ EN G
Sbjct: 477  IKKSCVDKMFTAVDRQNKIVSINDTVNVLEGPFQGKQGVVKHLYMGILFIYNESESENCG 536

Query: 996  IFCAKSDFCENITPPKDSSFRKGGNKSSSSFNQSPV---RSCEQEDSSYTFSRNRHSESN 826
             FCA+   CEN+   KD     GG+ + +  N  P+    S EQ +   T  R   S   
Sbjct: 537  FFCAQCGSCENVKKRKD----LGGSTTENLDNPFPMFAEPSYEQNEHRGT-ERPYRSTRE 591

Query: 825  QPFSIGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITVEEQFLSIPNIKRDFAA 646
            Q FSIGQ LRIRKGPLKGYLCRVVRI+R+DVTVKLDSL+K++TV+ +FLS+P  + D  +
Sbjct: 592  QLFSIGQMLRIRKGPLKGYLCRVVRIFRNDVTVKLDSLLKIVTVQAEFLSVPANRGDNLS 651

Query: 645  EMPSDIFGTQERFTGGLSGNGEQTVVTSSWDG-----ASSSWQALSTSTLFGNN------ 499
              P+  FG+Q+  T       E+T    SWD       S SWQ  S+STL   N      
Sbjct: 652  GAPAGNFGSQD--TSFFGSEAEKT----SWDNGLPSFGSDSWQPFSSSTLPVQNTGGESE 705

Query: 498  ND---QKTEQEQGADPWGSKVSLAAGDREQGADPWGSHASIVA-GDHEGSDPWGSKLVPV 331
            ND   +K+  E  +DPWG K     GD     DPWG+  +  A GD   SDPWG+K+ P 
Sbjct: 706  NDPWSKKSSAEGESDPWGKKTD---GD----PDPWGNKVAHSADGD---SDPWGNKVAPS 755

Query: 330  ATDTEQGADPWGSKASIS 277
            A   +  +DPWG+K + S
Sbjct: 756  A---DGDSDPWGNKVAPS 770


>gb|AQK94721.1| Protein RNA-directed DNA methylation 3 [Zea mays]
          Length = 1116

 Score =  610 bits (1572), Expect = 0.0
 Identities = 357/805 (44%), Positives = 472/805 (58%), Gaps = 52/805 (6%)
 Frame = -1

Query: 2547 MAVKEKGKQIA--------GKAQAXXXXXXXXXXXXXXXXGPGDQ---RRKRRAGVLQFF 2401
            MAVK KGKQ+A        G   A                GP      +R+RRAGVLQF 
Sbjct: 1    MAVKGKGKQVAAESPGPGAGAGGASGSGGKRRMASSDAGAGPSSSSAAKRRRRAGVLQFV 60

Query: 2400 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFSKGGRSEGKEFRSAGKPQYLPFLVKXX 2221
                                            F+ G  ++    +   +   LPFLVK  
Sbjct: 61   DDVAGVDDDYEEDELESEDDTDDGF-------FTGGEHAQNLSHKRTERSHPLPFLVKEE 113

Query: 2220 XXXXXXXXXLIKDRYGRGSEYAVYDEDPKECDDGVSVELSAEDPKIWRVKCMVGREQQMV 2041
                      IK+RY    +YA      +E DD  S++ + ++P IWRVKCMVGRE+QM 
Sbjct: 114  ELSGDELEEFIKNRYSNRVKYAADRSYSREDDDIFSMDCALKEPTIWRVKCMVGRERQMA 173

Query: 2040 LSLMHKYADLQRLGTKMEIISAFTLEHVKGYVYIEADKACDIVEACKGFFNIYATRMGLV 1861
               M K+ DL+++GTK+ II+AF L+H++G+V++EA+KACD+ EACKGF ++Y +R+  V
Sbjct: 174  FCFMQKFVDLRKIGTKVPIITAFALDHIRGFVFVEAEKACDVTEACKGFCSVYTSRITSV 233

Query: 1860 PSNDIPHLLSTRNKPCTISKGTWVRMKNGNYKGDLGQVVDYDEARKRATIKLVPRIDLQA 1681
            P+ ++P LLS+R KP  IS+GTW+RMKNGNYKGDL QVV  D+ RK+  IK+VPR+DL A
Sbjct: 234  PAAEVPSLLSSRTKPFEISRGTWIRMKNGNYKGDLAQVVSVDDGRKKVMIKIVPRVDLHA 293

Query: 1680 IAKKYGGGVSLKEAAVPAPRLISSQELEHFRSHIEIRRDRHSGDYFEILDGLMLKDGFLY 1501
            I+KK+GG VSLK AAVPAPRLISSQELE FR HIEI+RDR +G+ FE+LDGLM KDGFLY
Sbjct: 294  ISKKFGGAVSLKGAAVPAPRLISSQELEFFRPHIEIKRDRQTGEVFEVLDGLMFKDGFLY 353

Query: 1500 KKVSLASIVFWGVQPSKDELLKFTE--MTKADEEDVSWLSTVYNVRK------------- 1366
            KKV+L+S+++WG+QP++ ELLKF+     +A  +D+ WLS +Y  +K             
Sbjct: 354  KKVALSSLIYWGIQPTETELLKFSSSPSNRASADDLDWLSGMYGSKKRNLPEKRDMESSS 413

Query: 1365 -KMKSSEAADAKGASELGN-----GFILHDLVLFGRKGFGVXXXXXXXXXXXXXXXKEGQ 1204
             K++SS+A+D K ++   N      F LHDLVL+GRK FGV                EG 
Sbjct: 414  SKIRSSKASDLKASTSTENYDENDEFNLHDLVLYGRKDFGVIVAVEKDGFRILKGGPEGS 473

Query: 1203 EVMTIKSEDIKSHCVDKMFTASDRHRKTIYINDTVKVLKGPLEGREGVVRHMYKGTLFIY 1024
             V  ++ +DIK  CVDKMFTA D  +KTI INDTV V++GP +G++GVV+H+Y G LFIY
Sbjct: 474  AV-KVRKQDIKKGCVDKMFTAVDHQKKTISINDTVNVVEGPFQGKQGVVKHLYLGILFIY 532

Query: 1023 DENQEENSGIFCAKSDFCENITPPKDSSFRKGGNKSSSSFNQSPVRSCEQEDSSYTFSRN 844
            +E++ EN G FCA+S  CE I     SS  +  + ++  F   P  + EQ     T  R 
Sbjct: 533  NESESENCGFFCAQSGSCEKIRKGLGSSTTESSDFTTPMF---PEPAYEQNGHRDT-ERP 588

Query: 843  RHSESNQPFSIGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITVEEQFLSIPNI 664
              S   Q FSIGQ LRIRKGPLKGYLCRVVRI+R+DVTVKLDSL+K++TV+   LS+P  
Sbjct: 589  YRSTREQLFSIGQMLRIRKGPLKGYLCRVVRIFRNDVTVKLDSLLKIVTVQADLLSVPAN 648

Query: 663  KRDFAAEMPSDIFGTQE-RFTGGLSGNGEQTVVTSSWDG-----ASSSWQALSTSTLFGN 502
            + D  +  P+  FG+Q+  F G  +G        +SWD       S SWQ  S+STL   
Sbjct: 649  RGDNLSGAPASKFGSQDTSFFGSEAGK-------TSWDNGLPSFGSDSWQPFSSSTLSVQ 701

Query: 501  NN---------DQKTEQEQGADPWGSKV---SLAAGDREQG-ADPWGSHA-SIVAGDHEG 364
            N           +KT  +  +DPWG K    S   G +  G +DPWG  A S   GD   
Sbjct: 702  NAGGESEADPWSKKTSAKDDSDPWGKKTDGDSDRWGKKTDGDSDPWGKEAVSAADGD--- 758

Query: 363  SDPWGSKLVPVATDTEQGADPWGSK 289
            S+PWG + VP A      +DPWG K
Sbjct: 759  SNPWGKETVPSAAG---DSDPWGKK 780


>ref|XP_020587140.1| protein RNA-directed DNA methylation 3 [Phalaenopsis equestris]
          Length = 1960

 Score =  627 bits (1616), Expect = 0.0
 Identities = 358/782 (45%), Positives = 464/782 (59%), Gaps = 27/782 (3%)
 Frame = -1

Query: 2547 MAVKEKGKQIAGKAQAXXXXXXXXXXXXXXXXGP-GDQRRKRRAGVLQFFXXXXXXXXXX 2371
            MAVK KGKQIAGKA A                   G   +K+ +GVL+F           
Sbjct: 1    MAVKGKGKQIAGKAPASSASSSGKRKSNPLDGESSGVPPKKKPSGVLRFVDEAAVDADYD 60

Query: 2370 XXXXXXXXXXXXXXXXXXXXXDFSKGGRSEGKEFRSAGKPQYLPFLVKXXXXXXXXXXXL 2191
                                     G +      +  GK   LPF +K            
Sbjct: 61   GEKEEEDDLEWEIDEDFDFELP-DIGAKVAKNVSKGPGKSSPLPFFIKEEVMNDDELEEA 119

Query: 2190 IKDRYGRGSEYAVYDEDPKECDDGVSVELSAEDPKIWRVKCMVGREQQMVLSLMHKYADL 2011
            I +RY RGSE+  +D+D KEC++ + V  + +D  IWRVKCM+GRE+Q    LM K+ DL
Sbjct: 120  IMERY-RGSEFISFDDDVKECNETLLVSHATKDLSIWRVKCMMGRERQTSFCLMQKFVDL 178

Query: 2010 QRLGTKMEIISAFTLEHVKGYVYIEADKACDIVEACKGFFNIYATRMGLVPSNDIPHLLS 1831
            Q++G K+ I S F L+HVKG+VY+EADKA ++ EAC G   +Y +R+ LVP N+ P+LLS
Sbjct: 179  QKIGKKLHIFSVFALDHVKGFVYVEADKAGNVFEACNGLCFLYPSRIELVPRNETPNLLS 238

Query: 1830 TRNKPCTISKGTWVRMKNGNYKGDLGQVVDYDEARKRATIKLVPRIDLQAIAKKYGGGVS 1651
             + K   ISKG WVR+KNG YKGDL +V+  ++++KR TIKLVPRIDLQAIAKK+GGG S
Sbjct: 239  IQKKSSGISKGMWVRLKNGKYKGDLAEVIFVNDSKKRVTIKLVPRIDLQAIAKKFGGGTS 298

Query: 1650 LKEAAVPAPRLISSQELEHFRSHIEIRRDRHSGDYFEILDGLMLKDGFLYKKVSLASIVF 1471
            LK AA+PAPRLIS+ ELE FR HIE+RRDR +G+ FE+LDGLMLKDG+LYKKVS+ S++ 
Sbjct: 299  LKAAAIPAPRLISTHELEDFRPHIEVRRDRETGEIFEVLDGLMLKDGYLYKKVSICSLIH 358

Query: 1470 WGVQPSKDELLKFTEMTKADEEDVSWLSTVYNVRKK------------------------ 1363
            WGVQPS DEL KF +M     +DV WLS++Y  + K                        
Sbjct: 359  WGVQPSSDELTKFEDMGNDGVKDVGWLSSIYKTQIKNKLPETSHQKNGEKSKQKNGEKSN 418

Query: 1362 MKSSEAADAKGASELGNGFILHDLVLFGRKGFGVXXXXXXXXXXXXXXXKEGQEVMTIKS 1183
             K+ E ++ K   +  NGF + D VLFG+K  G+                   EV++I  
Sbjct: 419  RKNGEKSNQKDEDKQRNGFEIDDFVLFGKKDCGIIIDKENDVFKVLKGDANSSEVVSINI 478

Query: 1182 EDIKSHCVDKMFTASDRHRKTIYINDTVKVLKGPLEGREGVVRHMYKGTLFIYDENQEEN 1003
              IK +CVDK+FTA+DR  KTI+I+D VKV +GPLEGREG+V+HMYKG  FIYDE Q EN
Sbjct: 479  GVIKKNCVDKVFTATDRGMKTIFIDDVVKVSEGPLEGREGIVKHMYKGVFFIYDECQSEN 538

Query: 1002 SGIFCAKSDFCENITPPKDSSFRKGGNKSSSSFNQSPVRSCEQEDSSYTFSRNRHSESNQ 823
            +G FCAKS+ C+ +   +D    K  + +  SF QSP+RS EQ+D+S +FSRN  S S  
Sbjct: 539  NGFFCAKSEICDLVKKSRDFGGGKLSSNAGPSFAQSPIRSSEQDDNSQSFSRNHQSNSRG 598

Query: 822  PFSIGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITVEEQFLSIPNIKRDFAAE 643
             FS+GQTLRI KGPLKGYLCRV+RIYR+DVTVKLDSL K++TV+E+ LS PN KRD A  
Sbjct: 599  TFSVGQTLRICKGPLKGYLCRVIRIYRADVTVKLDSLGKLLTVDEKLLSFPNSKRDDATT 658

Query: 642  MPSDIFGTQ-ERFTGGLSGNGEQTVVTSSWDGASSSWQALSTSTL-FGNNNDQKTEQEQG 469
            M  D+FG+Q E+  GGL  +G    + +S  G   SW   S S   F  +ND K +Q   
Sbjct: 659  MQCDMFGSQEEQPIGGLLDSGGGFGMDNSSFG-RESWNTPSCSGFSFSRDNDCK-DQSAV 716

Query: 468  ADPWGSKVSLAAGDREQGADPWGSHASIVAGDHEGSDPWGSKLVPVATDTEQGADPWGSK 289
            AD WGSK +   GD++ GA    S A   + +    +   S       D E  AD W +K
Sbjct: 717  ADQWGSKPTFQDGDQDHGAANSWSKAPSSSAEQRSWNKMVSGEKGADADCENDADAW-NK 775

Query: 288  AS 283
            AS
Sbjct: 776  AS 777


>ref|XP_004961584.1| protein RNA-directed DNA methylation 3 [Setaria italica]
          Length = 1702

 Score =  621 bits (1602), Expect = 0.0
 Identities = 353/800 (44%), Positives = 477/800 (59%), Gaps = 44/800 (5%)
 Frame = -1

Query: 2547 MAVKEKGKQIA--------GKAQAXXXXXXXXXXXXXXXXGPGDQ---RRKRRAGVLQFF 2401
            MAVK KGKQ+A        G A                  GP      +R+RRAGV QF 
Sbjct: 1    MAVKGKGKQVAADPPGPDAGSASGSGGKRRNGYGYGYARAGPSSSSAAKRRRRAGVQQFV 60

Query: 2400 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFSKGGRSEGKEFRSAGKPQYLPFLVKXX 2221
                                            F+ G  ++    + A +   LPFLVK  
Sbjct: 61   DDAAGVDDDYEEEDVLESEEEASDPDDGF---FTGGEHAQNLSSKRAERSHPLPFLVKEE 117

Query: 2220 XXXXXXXXXLIKDRYGRGSEYAVYDEDPKECDDGVSVELSAEDPKIWRVKCMVGREQQMV 2041
                      I+ RY  G  YA      +E DD   ++ + ++P IWRVKCMVGRE+QM 
Sbjct: 118  ELSGDELEEFIRKRYSNGVRYAADRNFSREDDDIFPMDGALKEPTIWRVKCMVGRERQMA 177

Query: 2040 LSLMHKYADLQRLGTKMEIISAFTLEHVKGYVYIEADKACDIVEACKGFFNIYATRMGLV 1861
               M K+ DLQ++GTK+ II+AF L+HV+G+V++EA+KACD+ EACKGF ++YA+R+  V
Sbjct: 178  FCFMQKFVDLQKIGTKVPIITAFALDHVRGFVFVEAEKACDVTEACKGFCSVYASRIISV 237

Query: 1860 PSNDIPHLLSTRNKPCTISKGTWVRMKNGNYKGDLGQVVDYDEARKRATIKLVPRIDLQA 1681
            P+ ++P LLS+R KP  IS+GTWVRMKNGNYKGDL QVV  D+ RKR  IK++PR+DL A
Sbjct: 238  PAAEVPSLLSSRTKPFEISRGTWVRMKNGNYKGDLAQVVSEDDGRKRVLIKIIPRVDLHA 297

Query: 1680 IAKKYGGGVSLKEAAVPAPRLISSQELEHFRSHIEIRRDRHSGDYFEILDGLMLKDGFLY 1501
            I++KYGG +SLKEA VPAPRLISSQELE FR HIE++RDR +G+ FE+LDGLM KDGFLY
Sbjct: 298  ISRKYGGAISLKEAVVPAPRLISSQELEFFRPHIEMKRDRQTGEVFEVLDGLMFKDGFLY 357

Query: 1500 KKVSLASIVFWGVQPSKDELLKFTE--MTKADEEDVSWLSTVYNVRK------------- 1366
            K+V+L+S+++WG+QP++ ELLKF+   + +A  +D+ W+S++Y  +K             
Sbjct: 358  KRVALSSLIYWGIQPTETELLKFSSSPINRASADDLDWVSSIYGPKKRNLPAERGIKSPS 417

Query: 1365 -KMKSSEAADAKGASEL---GNGFILHDLVLFGRKGFGVXXXXXXXXXXXXXXXKEGQEV 1198
             K KSS+A+ A  ++E     + F LHDLVLFGRK FGV                EG  V
Sbjct: 418  SKTKSSKASKASTSTENYDDNDEFNLHDLVLFGRKDFGVIIAIEKDGLRILKGGPEGSAV 477

Query: 1197 MTIKSEDIKSHCVDKMFTASDRHRKTIYINDTVKVLKGPLEGREGVVRHMYKGTLFIYDE 1018
             T+K +DIK  CVDKMFTA DR +K I INDTV VL+GP +G++GVV+H+Y GTLFIY+E
Sbjct: 478  -TVKKQDIKKGCVDKMFTAVDRQKKIISINDTVNVLEGPFQGKQGVVKHLYMGTLFIYNE 536

Query: 1017 NQEENSGIFCAKSDFCENITPPKDSSFRKGGNKSSSSFNQSPVRSCEQEDSSYTFSRNRH 838
            ++ EN G FCA+   CEN+   K+SS  +  +     F++ P    E  D+     R   
Sbjct: 537  SESENCGFFCAQCGSCENVKKRKESSTTENLDNPIPMFSE-PYEQNEHRDT----ERPYR 591

Query: 837  SESNQPFSIGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITVEEQFLSIPNIKR 658
            S   Q FSIGQ LRIRKGPLKGYLCRVV+I+R+DVTVKLDSL+K++TV+ +FLS+P  + 
Sbjct: 592  STREQLFSIGQMLRIRKGPLKGYLCRVVKIFRNDVTVKLDSLLKIVTVQAEFLSVPANRG 651

Query: 657  DFAAEMPSDIFGTQERFTGGLSGNGEQTVVTSSWDG-----ASSSWQALSTSTLFGNNND 493
            D ++  P+  FG+Q+    G   +       +SWD       S SWQ  S+STL   N  
Sbjct: 652  DNSSGAPAGNFGSQDTSFFGSEAD------KASWDNGLPSFGSDSWQPFSSSTLPAQNAG 705

Query: 492  QKTEQEQ---------GADPWGSKVSLAAGDREQGADPWGSHASIVAGDHEGSDPWGSKL 340
             ++E +           +DPWG K        +  +DPWG+   + +GD + SDPWG K+
Sbjct: 706  GESESDPWCKKSSAGGESDPWGKKT-------DSDSDPWGNKV-VPSGDGD-SDPWGKKV 756

Query: 339  VPVATDTEQGADPWGSKASI 280
            V  A   +  +DPWG K  +
Sbjct: 757  VAPA---DGDSDPWGKKVVV 773