BLASTX nr result

ID: Ophiopogon25_contig00003374 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00003374
         (579 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020273907.1| LOW QUALITY PROTEIN: anaphase-promoting comp...    59   1e-06
gb|ONK65342.1| uncharacterized protein A4U43_C07F36130 [Asparagu...    59   1e-06
ref|XP_022984323.1| anaphase-promoting complex subunit 6-like [C...    58   2e-06

>ref|XP_020273907.1| LOW QUALITY PROTEIN: anaphase-promoting complex subunit 6
           [Asparagus officinalis]
          Length = 539

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 29/33 (87%), Positives = 31/33 (93%)
 Frame = -2

Query: 101 LKEEAVERLRAVARDAPSKHLYSAAIFFSDKVA 3
           +KEEAVERLRAV RD+ SKHLYSAAIFFSDKVA
Sbjct: 1   MKEEAVERLRAVVRDSLSKHLYSAAIFFSDKVA 33


>gb|ONK65342.1| uncharacterized protein A4U43_C07F36130 [Asparagus officinalis]
          Length = 539

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 29/33 (87%), Positives = 31/33 (93%)
 Frame = -2

Query: 101 LKEEAVERLRAVARDAPSKHLYSAAIFFSDKVA 3
           +KEEAVERLRAV RD+ SKHLYSAAIFFSDKVA
Sbjct: 1   MKEEAVERLRAVVRDSLSKHLYSAAIFFSDKVA 33


>ref|XP_022984323.1| anaphase-promoting complex subunit 6-like [Cucurbita maxima]
          Length = 605

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 29/49 (59%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
 Frame = -2

Query: 146 YIPKNLKN-KKSKQMRLKEEAVERLRAVARDAPSKHLYSAAIFFSDKVA 3
           Y   NL + + SK MR++EE +E+LR V RD  SKHLYS+AIFF+DKVA
Sbjct: 39  YCSTNLTSFELSKSMRMREEEIEKLRGVVRDCVSKHLYSSAIFFADKVA 87


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