BLASTX nr result

ID: Ophiopogon25_contig00003321 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00003321
         (470 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010906903.1| PREDICTED: protein TIC 62, chloroplastic [El...    57   2e-06
ref|XP_008813258.1| PREDICTED: protein TIC 62, chloroplastic [Ph...    56   4e-06

>ref|XP_010906903.1| PREDICTED: protein TIC 62, chloroplastic [Elaeis guineensis]
 ref|XP_010906904.1| PREDICTED: protein TIC 62, chloroplastic [Elaeis guineensis]
          Length = 577

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 24/37 (64%), Positives = 29/37 (78%)
 Frame = -3

Query: 456 SVAPQHISQQTSRPLSPYPMYEDLRPPSSPTPSVPKY 346
           S   QH++QQ  + LSP+ MYEDL+PPSSP PSVPKY
Sbjct: 541 SAEVQHVNQQKEQALSPFTMYEDLKPPSSPIPSVPKY 577


>ref|XP_008813258.1| PREDICTED: protein TIC 62, chloroplastic [Phoenix dactylifera]
          Length = 576

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 23/33 (69%), Positives = 27/33 (81%)
 Frame = -3

Query: 444 QHISQQTSRPLSPYPMYEDLRPPSSPTPSVPKY 346
           QH+ QQ  + LSP+ MYEDL+PPSSP PSVPKY
Sbjct: 544 QHVKQQKEQALSPFTMYEDLKPPSSPLPSVPKY 576


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