BLASTX nr result

ID: Ophiopogon25_contig00002352 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00002352
         (465 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020248415.1| HMG1/2-like protein [Asparagus officinalis]        57   4e-07
gb|AEX55234.1| HMG transcription factor [Allium sativum]               56   4e-07
ref|XP_020113278.1| HMG1/2-like protein isoform X2 [Ananas comosus]    55   1e-06
ref|XP_020113277.1| HMG1/2-like protein isoform X1 [Ananas comos...    55   2e-06
ref|XP_021627681.1| HMG1/2-like protein [Manihot esculenta] >gi|...    54   3e-06
ref|XP_020093646.1| HMG1/2-like protein [Ananas comosus]               54   6e-06
gb|AVE15783.1| NBS LRR-like protein [Musa acuminata subsp. burma...    52   9e-06
ref|XP_009420828.1| PREDICTED: DNA-binding protein MNB1B-like [M...    53   9e-06
gb|OVA04246.1| High mobility group box domain [Macleaya cordata]       53   9e-06
gb|AAL69379.1|AF462216_1 HMG-domain containing protein, partial ...    52   9e-06

>ref|XP_020248415.1| HMG1/2-like protein [Asparagus officinalis]
          Length = 161

 Score = 57.0 bits (136), Expect = 4e-07
 Identities = 33/57 (57%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
 Frame = -1

Query: 465 KEKNPNNKQVSVVGKAAGAKWKSMSXXXXXXXXXXXXXXXXXXXKTMAAYNKQ-SDG 298
           KEKNPNNKQVSVVGKAAG KWKS+S                   KTM AYNK  SDG
Sbjct: 64  KEKNPNNKQVSVVGKAAGDKWKSLSAAEKAPYEAKAAKRKADYNKTMVAYNKNLSDG 120


>gb|AEX55234.1| HMG transcription factor [Allium sativum]
          Length = 115

 Score = 55.8 bits (133), Expect = 4e-07
 Identities = 32/58 (55%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
 Frame = -1

Query: 465 KEKNPNNKQVSVVGKAAGAKWKSMSXXXXXXXXXXXXXXXXXXXKTMAAYNKQ-SDGA 295
           KEKNP+NKQVS VGKAAG KWKS++                   KTMAAYNK+ SDGA
Sbjct: 21  KEKNPDNKQVSAVGKAAGDKWKSLTAAEKAPYEAKAAKRKAEYTKTMAAYNKKLSDGA 78


>ref|XP_020113278.1| HMG1/2-like protein isoform X2 [Ananas comosus]
          Length = 144

 Score = 55.1 bits (131), Expect = 1e-06
 Identities = 32/57 (56%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
 Frame = -1

Query: 462 EKNPNNKQVSVVGKAAGAKWKSMSXXXXXXXXXXXXXXXXXXXKTMAAYN-KQSDGA 295
           EKNPNNK VSVVGKA G KWKS+S                   KTMAAYN KQS+GA
Sbjct: 64  EKNPNNKSVSVVGKAGGDKWKSLSEAEKAPYVAKANKLKSEYTKTMAAYNKKQSEGA 120


>ref|XP_020113277.1| HMG1/2-like protein isoform X1 [Ananas comosus]
 gb|OAY67432.1| HMG1/2-like protein [Ananas comosus]
          Length = 155

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 32/57 (56%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
 Frame = -1

Query: 462 EKNPNNKQVSVVGKAAGAKWKSMSXXXXXXXXXXXXXXXXXXXKTMAAYN-KQSDGA 295
           EKNPNNK VSVVGKA G KWKS+S                   KTMAAYN KQS+GA
Sbjct: 64  EKNPNNKSVSVVGKAGGDKWKSLSEAEKAPYVAKANKLKSEYTKTMAAYNKKQSEGA 120


>ref|XP_021627681.1| HMG1/2-like protein [Manihot esculenta]
 gb|OAY60993.1| hypothetical protein MANES_01G155300 [Manihot esculenta]
          Length = 137

 Score = 53.9 bits (128), Expect = 3e-06
 Identities = 30/56 (53%), Positives = 32/56 (57%)
 Frame = -1

Query: 465 KEKNPNNKQVSVVGKAAGAKWKSMSXXXXXXXXXXXXXXXXXXXKTMAAYNKQSDG 298
           KEK+PNNK VSVVGKAAG KWKSMS                   K MAAYNK+  G
Sbjct: 58  KEKHPNNKSVSVVGKAAGDKWKSMSEAEKAPYVAKAEKRKNEYNKNMAAYNKRMAG 113


>ref|XP_020093646.1| HMG1/2-like protein [Ananas comosus]
          Length = 156

 Score = 53.5 bits (127), Expect = 6e-06
 Identities = 28/56 (50%), Positives = 34/56 (60%)
 Frame = -1

Query: 465 KEKNPNNKQVSVVGKAAGAKWKSMSXXXXXXXXXXXXXXXXXXXKTMAAYNKQSDG 298
           +EKNPNNK VSVV KA GAKWK+MS                   K+MAAYNK+++G
Sbjct: 64  QEKNPNNKLVSVVSKAGGAKWKAMSESEKAPFVAKAAKRKADYEKSMAAYNKKAEG 119


>gb|AVE15783.1| NBS LRR-like protein [Musa acuminata subsp. burmannica]
          Length = 101

 Score = 52.0 bits (123), Expect = 9e-06
 Identities = 28/56 (50%), Positives = 30/56 (53%)
 Frame = -1

Query: 465 KEKNPNNKQVSVVGKAAGAKWKSMSXXXXXXXXXXXXXXXXXXXKTMAAYNKQSDG 298
           KEKNPNNK VSVVGKA G KWKS+S                   K +AAYNK   G
Sbjct: 9   KEKNPNNKSVSVVGKAGGDKWKSLSEAEKAPYVAKAAKFKTEYTKKIAAYNKNQSG 64


>ref|XP_009420828.1| PREDICTED: DNA-binding protein MNB1B-like [Musa acuminata subsp.
           malaccensis]
          Length = 154

 Score = 53.1 bits (126), Expect = 9e-06
 Identities = 31/57 (54%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
 Frame = -1

Query: 465 KEKNPNNKQVSVVGKAAGAKWKSMSXXXXXXXXXXXXXXXXXXXKTMAAYNK-QSDG 298
           KEKNPNNK VSVVGKA G KWKS+S                   K +AAYNK QSDG
Sbjct: 62  KEKNPNNKSVSVVGKAGGDKWKSLSEAEKAPYVAKAAKLKTDYTKKIAAYNKNQSDG 118


>gb|OVA04246.1| High mobility group box domain [Macleaya cordata]
          Length = 155

 Score = 53.1 bits (126), Expect = 9e-06
 Identities = 29/53 (54%), Positives = 31/53 (58%)
 Frame = -1

Query: 465 KEKNPNNKQVSVVGKAAGAKWKSMSXXXXXXXXXXXXXXXXXXXKTMAAYNKQ 307
           KEK+PNNK VSVVGKA G KWKSMS                   KTMAAYNK+
Sbjct: 66  KEKHPNNKSVSVVGKAGGDKWKSMSEAEKAPFVAKAEKRKAEYNKTMAAYNKK 118


>gb|AAL69379.1|AF462216_1 HMG-domain containing protein, partial [Narcissus pseudonarcissus]
          Length = 106

 Score = 52.0 bits (123), Expect = 9e-06
 Identities = 24/25 (96%), Positives = 24/25 (96%)
 Frame = -1

Query: 465 KEKNPNNKQVSVVGKAAGAKWKSMS 391
           KEKNPNNKQVSVVGKAAG KWKSMS
Sbjct: 65  KEKNPNNKQVSVVGKAAGDKWKSMS 89


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