BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00002272
         (675 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020274150.1| LOW QUALITY PROTEIN: RNA pseudouridine synth...   194   1e-71
ref|XP_009382727.1| PREDICTED: RNA pseudouridine synthase 2, chl...   162   6e-59
ref|XP_010935174.1| PREDICTED: RNA pseudouridine synthase 2, chl...   161   1e-58
ref|XP_008806144.1| PREDICTED: RNA pseudouridine synthase 2, chl...   157   9e-58
ref|XP_008806145.1| PREDICTED: RNA pseudouridine synthase 2, chl...   157   9e-58
ref|XP_008806147.1| PREDICTED: RNA pseudouridine synthase 2, chl...   157   9e-58
ref|XP_008806148.1| PREDICTED: RNA pseudouridine synthase 2, chl...   157   9e-58
ref|XP_020704971.1| RNA pseudouridine synthase 2, chloroplastic-...   167   6e-57
dbj|GAY42852.1| hypothetical protein CUMW_070100 [Citrus unshiu]...   160   1e-56
gb|OVA15944.1| RNA-binding S4 domain [Macleaya cordata]               162   1e-56
ref|XP_024040107.1| RNA pseudouridine synthase 2, chloroplastic ...   157   2e-56
ref|XP_006473714.1| PREDICTED: RNA pseudouridine synthase 2, chl...   157   2e-56
ref|XP_015384244.1| PREDICTED: RNA pseudouridine synthase 2, chl...   157   2e-56
ref|XP_010241328.1| PREDICTED: RNA pseudouridine synthase 2, chl...   159   3e-56
ref|XP_010241329.1| PREDICTED: RNA pseudouridine synthase 2, chl...   159   3e-56
ref|XP_010241330.1| PREDICTED: RNA pseudouridine synthase 2, chl...   159   3e-56
ref|XP_010416516.1| PREDICTED: RNA pseudouridine synthase 2, chl...   156   5e-56
gb|AAF26765.1|AC007396_14 T4O12.25 [Arabidopsis thaliana]             156   6e-56
ref|XP_020890530.1| RNA pseudouridine synthase 2, chloroplastic ...   156   6e-56
ref|XP_017621287.1| PREDICTED: RNA pseudouridine synthase 2, chl...   156   6e-56

>ref|XP_020274150.1| LOW QUALITY PROTEIN: RNA pseudouridine synthase 2, chloroplastic
           [Asparagus officinalis]
          Length = 434

 Score =  194 bits (494), Expect(2) = 1e-71
 Identities = 94/129 (72%), Positives = 103/129 (79%)
 Frame = -2

Query: 494 YKVVEIFADGGSALVQWRLETGRTHQIRAHAKYLGVPLLGDELYGGTKGMAXXXXXXXXX 315
           YKVVE+FA GGSALV+WRLETGRTHQIRAHAKYLGVPLLGDELYGGTKGMA         
Sbjct: 306 YKVVEVFAGGGSALVRWRLETGRTHQIRAHAKYLGVPLLGDELYGGTKGMALSLLKPRIP 365

Query: 314 XXXXXXXXRMISRLQRPCLHALYLGFTHPHTGEYLKFSCPPPDDFSEALSVLRSFPRQSA 135
                    M+SRLQRPCLHAL LGFTHPHTG YL+FSCPPPDDFSE LS+LRSF +Q+ 
Sbjct: 366 SNSHGHLSCMVSRLQRPCLHALSLGFTHPHTGVYLRFSCPPPDDFSEVLSLLRSFSQQTG 425

Query: 134 VSSDMEIEV 108
            +SD E+EV
Sbjct: 426 ENSDTELEV 434



 Score =  103 bits (258), Expect(2) = 1e-71
 Identities = 51/59 (86%), Positives = 53/59 (89%)
 Frame = -3

Query: 673 DEHSHSHLAEQFKRHTIHRMYISLTSGVPYRGSGRIEIPIARDSSNRIRMAAVPVLKNS 497
           DEHSHSHLAEQFK H IHR+YISLTSGVP   SGRIE+PIARDSSNRIRMAAVP LKNS
Sbjct: 238 DEHSHSHLAEQFKNHIIHRVYISLTSGVPRPDSGRIEVPIARDSSNRIRMAAVPGLKNS 296


>ref|XP_009382727.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1
           [Musa acuminata subsp. malaccensis]
 ref|XP_009382728.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1
           [Musa acuminata subsp. malaccensis]
          Length = 440

 Score =  162 bits (409), Expect(2) = 6e-59
 Identities = 76/114 (66%), Positives = 86/114 (75%)
 Frame = -2

Query: 494 YKVVEIFADGGSALVQWRLETGRTHQIRAHAKYLGVPLLGDELYGGTKGMAXXXXXXXXX 315
           YKV+E F  GG+ALVQWRLETGRTHQIRAHAKYLG+PLLGDE+YGGTK MA         
Sbjct: 319 YKVIEDFMGGGAALVQWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKDMALSLLRPRTP 378

Query: 314 XXXXXXXXRMISRLQRPCLHALYLGFTHPHTGEYLKFSCPPPDDFSEALSVLRS 153
                    +IS+LQRPCLHA  +GF HPHTGE+L+FSCPPPDDFS+ L  LRS
Sbjct: 379 PTYHGHLSNIISKLQRPCLHAFSIGFKHPHTGEFLQFSCPPPDDFSKVLDQLRS 432



 Score = 94.4 bits (233), Expect(2) = 6e-59
 Identities = 45/59 (76%), Positives = 51/59 (86%)
 Frame = -3

Query: 673 DEHSHSHLAEQFKRHTIHRMYISLTSGVPYRGSGRIEIPIARDSSNRIRMAAVPVLKNS 497
           D+HSH+HLAEQFK+HTIHR+Y+SLTSGVP    GRIEIPIARDS+NRIRM AV  L NS
Sbjct: 251 DDHSHAHLAEQFKKHTIHRVYMSLTSGVPNPSYGRIEIPIARDSNNRIRMVAVSGLNNS 309


>ref|XP_010935174.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1
           [Elaeis guineensis]
          Length = 449

 Score =  161 bits (407), Expect(2) = 1e-58
 Identities = 74/114 (64%), Positives = 87/114 (76%)
 Frame = -2

Query: 494 YKVVEIFADGGSALVQWRLETGRTHQIRAHAKYLGVPLLGDELYGGTKGMAXXXXXXXXX 315
           YKV+E+   GGSALV+WRLETGRTHQIRAHAKY+G+PLLGDE+YGGTK MA         
Sbjct: 332 YKVIELLGRGGSALVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMALSLLRPRTS 391

Query: 314 XXXXXXXXRMISRLQRPCLHALYLGFTHPHTGEYLKFSCPPPDDFSEALSVLRS 153
                   +++S+LQRPCLHA  LGF HPHTGEYL+FSCPPPDDF+E L  L+S
Sbjct: 392 SSHHGHLSQILSKLQRPCLHASSLGFKHPHTGEYLRFSCPPPDDFAEVLDQLQS 445



 Score = 94.4 bits (233), Expect(2) = 1e-58
 Identities = 47/59 (79%), Positives = 50/59 (84%)
 Frame = -3

Query: 673 DEHSHSHLAEQFKRHTIHRMYISLTSGVPYRGSGRIEIPIARDSSNRIRMAAVPVLKNS 497
           DEHSH+HLAEQFK HTIHR+YISLT GVP   SGRIEIPIARDS+NRIRMAAV    NS
Sbjct: 264 DEHSHAHLAEQFKLHTIHRVYISLTCGVPNPSSGRIEIPIARDSNNRIRMAAVLGTSNS 322


>ref|XP_008806144.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1
           [Phoenix dactylifera]
          Length = 439

 Score =  157 bits (397), Expect(2) = 9e-58
 Identities = 71/114 (62%), Positives = 87/114 (76%)
 Frame = -2

Query: 494 YKVVEIFADGGSALVQWRLETGRTHQIRAHAKYLGVPLLGDELYGGTKGMAXXXXXXXXX 315
           YKV+++   GGS+LV+WRLETGRTHQIRAHAKYLG+PLLGDE+YGGTK MA         
Sbjct: 322 YKVIKVLGGGGSSLVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKSMALSLLRPRTS 381

Query: 314 XXXXXXXXRMISRLQRPCLHALYLGFTHPHTGEYLKFSCPPPDDFSEALSVLRS 153
                   +++S++QRPCLHA  LGF HPHTGE+L+FSCPPPDDF+E L  L+S
Sbjct: 382 SSHHGHLSQILSKVQRPCLHASLLGFKHPHTGEHLRFSCPPPDDFAEVLDQLQS 435



 Score = 95.1 bits (235), Expect(2) = 9e-58
 Identities = 47/59 (79%), Positives = 50/59 (84%)
 Frame = -3

Query: 673 DEHSHSHLAEQFKRHTIHRMYISLTSGVPYRGSGRIEIPIARDSSNRIRMAAVPVLKNS 497
           DEHSH+HLAEQFK HTIHR+YISLT GVP   SGRIEIPIARDS+NRIRMAAV    NS
Sbjct: 254 DEHSHAHLAEQFKLHTIHRVYISLTCGVPNPSSGRIEIPIARDSNNRIRMAAVSGTSNS 312


>ref|XP_008806145.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X2
           [Phoenix dactylifera]
          Length = 436

 Score =  157 bits (397), Expect(2) = 9e-58
 Identities = 71/114 (62%), Positives = 87/114 (76%)
 Frame = -2

Query: 494 YKVVEIFADGGSALVQWRLETGRTHQIRAHAKYLGVPLLGDELYGGTKGMAXXXXXXXXX 315
           YKV+++   GGS+LV+WRLETGRTHQIRAHAKYLG+PLLGDE+YGGTK MA         
Sbjct: 319 YKVIKVLGGGGSSLVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKSMALSLLRPRTS 378

Query: 314 XXXXXXXXRMISRLQRPCLHALYLGFTHPHTGEYLKFSCPPPDDFSEALSVLRS 153
                   +++S++QRPCLHA  LGF HPHTGE+L+FSCPPPDDF+E L  L+S
Sbjct: 379 SSHHGHLSQILSKVQRPCLHASLLGFKHPHTGEHLRFSCPPPDDFAEVLDQLQS 432



 Score = 95.1 bits (235), Expect(2) = 9e-58
 Identities = 47/59 (79%), Positives = 50/59 (84%)
 Frame = -3

Query: 673 DEHSHSHLAEQFKRHTIHRMYISLTSGVPYRGSGRIEIPIARDSSNRIRMAAVPVLKNS 497
           DEHSH+HLAEQFK HTIHR+YISLT GVP   SGRIEIPIARDS+NRIRMAAV    NS
Sbjct: 251 DEHSHAHLAEQFKLHTIHRVYISLTCGVPNPSSGRIEIPIARDSNNRIRMAAVSGTSNS 309


>ref|XP_008806147.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X3
           [Phoenix dactylifera]
          Length = 391

 Score =  157 bits (397), Expect(2) = 9e-58
 Identities = 71/114 (62%), Positives = 87/114 (76%)
 Frame = -2

Query: 494 YKVVEIFADGGSALVQWRLETGRTHQIRAHAKYLGVPLLGDELYGGTKGMAXXXXXXXXX 315
           YKV+++   GGS+LV+WRLETGRTHQIRAHAKYLG+PLLGDE+YGGTK MA         
Sbjct: 274 YKVIKVLGGGGSSLVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKSMALSLLRPRTS 333

Query: 314 XXXXXXXXRMISRLQRPCLHALYLGFTHPHTGEYLKFSCPPPDDFSEALSVLRS 153
                   +++S++QRPCLHA  LGF HPHTGE+L+FSCPPPDDF+E L  L+S
Sbjct: 334 SSHHGHLSQILSKVQRPCLHASLLGFKHPHTGEHLRFSCPPPDDFAEVLDQLQS 387



 Score = 95.1 bits (235), Expect(2) = 9e-58
 Identities = 47/59 (79%), Positives = 50/59 (84%)
 Frame = -3

Query: 673 DEHSHSHLAEQFKRHTIHRMYISLTSGVPYRGSGRIEIPIARDSSNRIRMAAVPVLKNS 497
           DEHSH+HLAEQFK HTIHR+YISLT GVP   SGRIEIPIARDS+NRIRMAAV    NS
Sbjct: 206 DEHSHAHLAEQFKLHTIHRVYISLTCGVPNPSSGRIEIPIARDSNNRIRMAAVSGTSNS 264


>ref|XP_008806148.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X5
           [Phoenix dactylifera]
          Length = 349

 Score =  157 bits (397), Expect(2) = 9e-58
 Identities = 71/114 (62%), Positives = 87/114 (76%)
 Frame = -2

Query: 494 YKVVEIFADGGSALVQWRLETGRTHQIRAHAKYLGVPLLGDELYGGTKGMAXXXXXXXXX 315
           YKV+++   GGS+LV+WRLETGRTHQIRAHAKYLG+PLLGDE+YGGTK MA         
Sbjct: 232 YKVIKVLGGGGSSLVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKSMALSLLRPRTS 291

Query: 314 XXXXXXXXRMISRLQRPCLHALYLGFTHPHTGEYLKFSCPPPDDFSEALSVLRS 153
                   +++S++QRPCLHA  LGF HPHTGE+L+FSCPPPDDF+E L  L+S
Sbjct: 292 SSHHGHLSQILSKVQRPCLHASLLGFKHPHTGEHLRFSCPPPDDFAEVLDQLQS 345



 Score = 95.1 bits (235), Expect(2) = 9e-58
 Identities = 47/59 (79%), Positives = 50/59 (84%)
 Frame = -3

Query: 673 DEHSHSHLAEQFKRHTIHRMYISLTSGVPYRGSGRIEIPIARDSSNRIRMAAVPVLKNS 497
           DEHSH+HLAEQFK HTIHR+YISLT GVP   SGRIEIPIARDS+NRIRMAAV    NS
Sbjct: 164 DEHSHAHLAEQFKLHTIHRVYISLTCGVPNPSSGRIEIPIARDSNNRIRMAAVSGTSNS 222


>ref|XP_020704971.1| RNA pseudouridine synthase 2, chloroplastic-like isoform X1
           [Dendrobium catenatum]
          Length = 437

 Score =  167 bits (422), Expect(2) = 6e-57
 Identities = 79/114 (69%), Positives = 87/114 (76%)
 Frame = -2

Query: 494 YKVVEIFADGGSALVQWRLETGRTHQIRAHAKYLGVPLLGDELYGGTKGMAXXXXXXXXX 315
           YKVVE+FA GGSALVQWRLETGRTHQIR HAKYLG+PLLGDELYGGTKG+A         
Sbjct: 310 YKVVEVFAAGGSALVQWRLETGRTHQIRTHAKYLGIPLLGDELYGGTKGLALSLLKSRTP 369

Query: 314 XXXXXXXXRMISRLQRPCLHALYLGFTHPHTGEYLKFSCPPPDDFSEALSVLRS 153
                    M+S+LQRPCLHA  LGF HPHTGE+L FSCPPPDDF+E L  LR+
Sbjct: 370 MSCHALVSDMVSKLQRPCLHAQSLGFKHPHTGEHLHFSCPPPDDFTEILHQLRT 423



 Score = 82.8 bits (203), Expect(2) = 6e-57
 Identities = 39/59 (66%), Positives = 45/59 (76%)
 Frame = -3

Query: 673 DEHSHSHLAEQFKRHTIHRMYISLTSGVPYRGSGRIEIPIARDSSNRIRMAAVPVLKNS 497
           DEHSH+HLA+QFK HTIHR Y+SL SGVP   SGRI IPI RD +NR RMA V  + +S
Sbjct: 242 DEHSHAHLAKQFKLHTIHRQYVSLVSGVPSPSSGRIAIPIVRDCNNRTRMATVSGINSS 300


>dbj|GAY42852.1| hypothetical protein CUMW_070100 [Citrus unshiu]
 dbj|GAY42853.1| hypothetical protein CUMW_070100 [Citrus unshiu]
          Length = 421

 Score =  160 bits (405), Expect(2) = 1e-56
 Identities = 76/123 (61%), Positives = 90/123 (73%)
 Frame = -2

Query: 494 YKVVEIFADGGSALVQWRLETGRTHQIRAHAKYLGVPLLGDELYGGTKGMAXXXXXXXXX 315
           YKV+EI A GGSALV+WRLETGRTHQIRAHAKY+G+PLLGDE+YGGTK MA         
Sbjct: 299 YKVIEILAGGGSALVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKNMAKSLLQPRTA 358

Query: 314 XXXXXXXXRMISRLQRPCLHALYLGFTHPHTGEYLKFSCPPPDDFSEALSVLRSFPRQSA 135
                   +++S LQRPCLHA+ LGFTHPHTGE ++FSCPPP DF+E LS LR    +  
Sbjct: 359 PGSHGKVLKLVSGLQRPCLHAVALGFTHPHTGEKIQFSCPPPADFAEILSQLREIGTEKL 418

Query: 134 VSS 126
            S+
Sbjct: 419 SSN 421



 Score = 88.6 bits (218), Expect(2) = 1e-56
 Identities = 40/54 (74%), Positives = 48/54 (88%)
 Frame = -3

Query: 673 DEHSHSHLAEQFKRHTIHRMYISLTSGVPYRGSGRIEIPIARDSSNRIRMAAVP 512
           DEHSH+HL+EQFK HTI R+YISLTSGVP + S RIE+PI+RD +NRIRMAA+P
Sbjct: 231 DEHSHAHLSEQFKLHTIERVYISLTSGVPSQSSSRIEVPISRDPNNRIRMAAIP 284


>gb|OVA15944.1| RNA-binding S4 domain [Macleaya cordata]
          Length = 458

 Score =  162 bits (411), Expect(2) = 1e-56
 Identities = 74/119 (62%), Positives = 90/119 (75%)
 Frame = -2

Query: 494 YKVVEIFADGGSALVQWRLETGRTHQIRAHAKYLGVPLLGDELYGGTKGMAXXXXXXXXX 315
           Y+V+E+ ADGGSALV+WRLETGRTHQIRAHAKYLG+PLLGDE+YGGTKGMA         
Sbjct: 325 YRVIEVLADGGSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKGMALSLLRPKTP 384

Query: 314 XXXXXXXXRMISRLQRPCLHALYLGFTHPHTGEYLKFSCPPPDDFSEALSVLRSFPRQS 138
                    ++++L+RPCLHA  LGF HPHTGE + FSCPPP DF+E LS+LR+  + S
Sbjct: 385 SNNHGHLSELVNKLERPCLHAFTLGFKHPHTGEVVNFSCPPPADFTEILSLLRNIKKIS 443



 Score = 85.9 bits (211), Expect(2) = 1e-56
 Identities = 41/59 (69%), Positives = 48/59 (81%)
 Frame = -3

Query: 673 DEHSHSHLAEQFKRHTIHRMYISLTSGVPYRGSGRIEIPIARDSSNRIRMAAVPVLKNS 497
           DEHSH+ L+EQFK+HTIHR+Y+SLTSGVP   SGRIEIPI RD +NR+RM AV    NS
Sbjct: 257 DEHSHAQLSEQFKQHTIHRVYVSLTSGVPSPTSGRIEIPIGRDVNNRLRMTAVSGPNNS 315


>ref|XP_024040107.1| RNA pseudouridine synthase 2, chloroplastic [Citrus clementina]
          Length = 421

 Score =  157 bits (397), Expect(2) = 2e-56
 Identities = 75/123 (60%), Positives = 89/123 (72%)
 Frame = -2

Query: 494 YKVVEIFADGGSALVQWRLETGRTHQIRAHAKYLGVPLLGDELYGGTKGMAXXXXXXXXX 315
           YKV+EI A GGSALV+WRLETGRTHQIRAHAKY+G+PLLGDE+YGGTK MA         
Sbjct: 299 YKVIEILAGGGSALVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKNMAKSLLQPRTA 358

Query: 314 XXXXXXXXRMISRLQRPCLHALYLGFTHPHTGEYLKFSCPPPDDFSEALSVLRSFPRQSA 135
                   +++S LQRPCLHA+ LGFTHPHT E ++FSCPPP DF+E LS LR    +  
Sbjct: 359 PGSHGKVLKLVSGLQRPCLHAVALGFTHPHTREKIQFSCPPPADFAEILSQLREIGTEKL 418

Query: 134 VSS 126
            S+
Sbjct: 419 SSN 421



 Score = 90.9 bits (224), Expect(2) = 2e-56
 Identities = 41/54 (75%), Positives = 49/54 (90%)
 Frame = -3

Query: 673 DEHSHSHLAEQFKRHTIHRMYISLTSGVPYRGSGRIEIPIARDSSNRIRMAAVP 512
           DEHSH+HL+EQFK HTI R+YISLTSGVP + SGRIE+PI+RD +NRIRMAA+P
Sbjct: 231 DEHSHAHLSEQFKLHTIERVYISLTSGVPSQSSGRIEVPISRDPNNRIRMAAIP 284


>ref|XP_006473714.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1
           [Citrus sinensis]
          Length = 421

 Score =  157 bits (397), Expect(2) = 2e-56
 Identities = 75/123 (60%), Positives = 89/123 (72%)
 Frame = -2

Query: 494 YKVVEIFADGGSALVQWRLETGRTHQIRAHAKYLGVPLLGDELYGGTKGMAXXXXXXXXX 315
           YKV+EI A GGSALV+WRLETGRTHQIRAHAKY+G+PLLGDE+YGGTK MA         
Sbjct: 299 YKVIEILAGGGSALVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKNMAKSLLQPRTA 358

Query: 314 XXXXXXXXRMISRLQRPCLHALYLGFTHPHTGEYLKFSCPPPDDFSEALSVLRSFPRQSA 135
                   +++S LQRPCLHA+ LGFTHPHT E ++FSCPPP DF+E LS LR    +  
Sbjct: 359 PGSHGKVLKLVSGLQRPCLHAVALGFTHPHTREKIQFSCPPPADFAEILSQLREIGTEKL 418

Query: 134 VSS 126
            S+
Sbjct: 419 SSN 421



 Score = 90.9 bits (224), Expect(2) = 2e-56
 Identities = 41/54 (75%), Positives = 49/54 (90%)
 Frame = -3

Query: 673 DEHSHSHLAEQFKRHTIHRMYISLTSGVPYRGSGRIEIPIARDSSNRIRMAAVP 512
           DEHSH+HL+EQFK HTI R+YISLTSGVP + SGRIE+PI+RD +NRIRMAA+P
Sbjct: 231 DEHSHAHLSEQFKLHTIERVYISLTSGVPSQSSGRIEVPISRDPNNRIRMAAIP 284


>ref|XP_015384244.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X2
           [Citrus sinensis]
          Length = 338

 Score =  157 bits (397), Expect(2) = 2e-56
 Identities = 75/123 (60%), Positives = 89/123 (72%)
 Frame = -2

Query: 494 YKVVEIFADGGSALVQWRLETGRTHQIRAHAKYLGVPLLGDELYGGTKGMAXXXXXXXXX 315
           YKV+EI A GGSALV+WRLETGRTHQIRAHAKY+G+PLLGDE+YGGTK MA         
Sbjct: 216 YKVIEILAGGGSALVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKNMAKSLLQPRTA 275

Query: 314 XXXXXXXXRMISRLQRPCLHALYLGFTHPHTGEYLKFSCPPPDDFSEALSVLRSFPRQSA 135
                   +++S LQRPCLHA+ LGFTHPHT E ++FSCPPP DF+E LS LR    +  
Sbjct: 276 PGSHGKVLKLVSGLQRPCLHAVALGFTHPHTREKIQFSCPPPADFAEILSQLREIGTEKL 335

Query: 134 VSS 126
            S+
Sbjct: 336 SSN 338



 Score = 90.9 bits (224), Expect(2) = 2e-56
 Identities = 41/54 (75%), Positives = 49/54 (90%)
 Frame = -3

Query: 673 DEHSHSHLAEQFKRHTIHRMYISLTSGVPYRGSGRIEIPIARDSSNRIRMAAVP 512
           DEHSH+HL+EQFK HTI R+YISLTSGVP + SGRIE+PI+RD +NRIRMAA+P
Sbjct: 148 DEHSHAHLSEQFKLHTIERVYISLTSGVPSQSSGRIEVPISRDPNNRIRMAAIP 201


>ref|XP_010241328.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1
           [Nelumbo nucifera]
          Length = 471

 Score =  159 bits (402), Expect(2) = 3e-56
 Identities = 74/114 (64%), Positives = 87/114 (76%)
 Frame = -2

Query: 494 YKVVEIFADGGSALVQWRLETGRTHQIRAHAKYLGVPLLGDELYGGTKGMAXXXXXXXXX 315
           Y+VVE+ A GGSALV+WRLETGRTHQIRAHAKYLG+PLLGDE+YGGT+ MA         
Sbjct: 321 YRVVEVLAGGGSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTRNMALSLLRTRSH 380

Query: 314 XXXXXXXXRMISRLQRPCLHALYLGFTHPHTGEYLKFSCPPPDDFSEALSVLRS 153
                   +++S+LQRPCLHA  LGF HPHTGE ++FSCPPP DF+E LS LRS
Sbjct: 381 SSFHGDLSQLVSKLQRPCLHAFTLGFKHPHTGENMQFSCPPPADFTEVLSQLRS 434



 Score = 88.2 bits (217), Expect(2) = 3e-56
 Identities = 41/54 (75%), Positives = 47/54 (87%)
 Frame = -3

Query: 673 DEHSHSHLAEQFKRHTIHRMYISLTSGVPYRGSGRIEIPIARDSSNRIRMAAVP 512
           DEHSH+HL+EQFK HTI+R+Y+SLT GVP   SGRIE+PI RD SNRIRMAAVP
Sbjct: 253 DEHSHAHLSEQFKLHTINRIYLSLTCGVPSLNSGRIEVPIGRDLSNRIRMAAVP 306


>ref|XP_010241329.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X2
           [Nelumbo nucifera]
          Length = 453

 Score =  159 bits (402), Expect(2) = 3e-56
 Identities = 74/114 (64%), Positives = 87/114 (76%)
 Frame = -2

Query: 494 YKVVEIFADGGSALVQWRLETGRTHQIRAHAKYLGVPLLGDELYGGTKGMAXXXXXXXXX 315
           Y+VVE+ A GGSALV+WRLETGRTHQIRAHAKYLG+PLLGDE+YGGT+ MA         
Sbjct: 321 YRVVEVLAGGGSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTRNMALSLLRTRSH 380

Query: 314 XXXXXXXXRMISRLQRPCLHALYLGFTHPHTGEYLKFSCPPPDDFSEALSVLRS 153
                   +++S+LQRPCLHA  LGF HPHTGE ++FSCPPP DF+E LS LRS
Sbjct: 381 SSFHGDLSQLVSKLQRPCLHAFTLGFKHPHTGENMQFSCPPPADFTEVLSQLRS 434



 Score = 88.2 bits (217), Expect(2) = 3e-56
 Identities = 41/54 (75%), Positives = 47/54 (87%)
 Frame = -3

Query: 673 DEHSHSHLAEQFKRHTIHRMYISLTSGVPYRGSGRIEIPIARDSSNRIRMAAVP 512
           DEHSH+HL+EQFK HTI+R+Y+SLT GVP   SGRIE+PI RD SNRIRMAAVP
Sbjct: 253 DEHSHAHLSEQFKLHTINRIYLSLTCGVPSLNSGRIEVPIGRDLSNRIRMAAVP 306


>ref|XP_010241330.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X3
           [Nelumbo nucifera]
          Length = 443

 Score =  159 bits (402), Expect(2) = 3e-56
 Identities = 74/114 (64%), Positives = 87/114 (76%)
 Frame = -2

Query: 494 YKVVEIFADGGSALVQWRLETGRTHQIRAHAKYLGVPLLGDELYGGTKGMAXXXXXXXXX 315
           Y+VVE+ A GGSALV+WRLETGRTHQIRAHAKYLG+PLLGDE+YGGT+ MA         
Sbjct: 321 YRVVEVLAGGGSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTRNMALSLLRTRSH 380

Query: 314 XXXXXXXXRMISRLQRPCLHALYLGFTHPHTGEYLKFSCPPPDDFSEALSVLRS 153
                   +++S+LQRPCLHA  LGF HPHTGE ++FSCPPP DF+E LS LRS
Sbjct: 381 SSFHGDLSQLVSKLQRPCLHAFTLGFKHPHTGENMQFSCPPPADFTEVLSQLRS 434



 Score = 88.2 bits (217), Expect(2) = 3e-56
 Identities = 41/54 (75%), Positives = 47/54 (87%)
 Frame = -3

Query: 673 DEHSHSHLAEQFKRHTIHRMYISLTSGVPYRGSGRIEIPIARDSSNRIRMAAVP 512
           DEHSH+HL+EQFK HTI+R+Y+SLT GVP   SGRIE+PI RD SNRIRMAAVP
Sbjct: 253 DEHSHAHLSEQFKLHTINRIYLSLTCGVPSLNSGRIEVPIGRDLSNRIRMAAVP 306


>ref|XP_010416516.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like
           [Camelina sativa]
          Length = 431

 Score =  156 bits (395), Expect(2) = 5e-56
 Identities = 74/113 (65%), Positives = 84/113 (74%)
 Frame = -2

Query: 494 YKVVEIFADGGSALVQWRLETGRTHQIRAHAKYLGVPLLGDELYGGTKGMAXXXXXXXXX 315
           YKV+E FA GGSALV+WRLETGRTHQIRAHAKY+GVPLLGDE+YGGTK MA         
Sbjct: 311 YKVIETFAGGGSALVEWRLETGRTHQIRAHAKYMGVPLLGDEVYGGTKSMALSLLQKRVS 370

Query: 314 XXXXXXXXRMISRLQRPCLHALYLGFTHPHTGEYLKFSCPPPDDFSEALSVLR 156
                    +ISRL RPCLHA+ LGFTHP TGE +KFSCPPP D +E + +LR
Sbjct: 371 RSDQEEIIELISRLDRPCLHAIVLGFTHPCTGEIVKFSCPPPPDLAEIVGLLR 423



 Score = 90.1 bits (222), Expect(2) = 5e-56
 Identities = 42/54 (77%), Positives = 47/54 (87%)
 Frame = -3

Query: 673 DEHSHSHLAEQFKRHTIHRMYISLTSGVPYRGSGRIEIPIARDSSNRIRMAAVP 512
           DEHSH+HLAEQFK HTI R+Y+SLT+GVP    GRIEIPI RDSSNRIRMAA+P
Sbjct: 243 DEHSHAHLAEQFKLHTIERVYVSLTTGVPSPPQGRIEIPIGRDSSNRIRMAAIP 296


>gb|AAF26765.1|AC007396_14 T4O12.25 [Arabidopsis thaliana]
          Length = 980

 Score =  156 bits (394), Expect(2) = 6e-56
 Identities = 73/113 (64%), Positives = 84/113 (74%)
 Frame = -2

Query: 494  YKVVEIFADGGSALVQWRLETGRTHQIRAHAKYLGVPLLGDELYGGTKGMAXXXXXXXXX 315
            YKV+E FA GGSALV+WRLETGRTHQIRAHAKY+GVPLLGDE+YGGTK MA         
Sbjct: 864  YKVIETFAGGGSALVEWRLETGRTHQIRAHAKYMGVPLLGDEVYGGTKSMALSLLQKRVS 923

Query: 314  XXXXXXXXRMISRLQRPCLHALYLGFTHPHTGEYLKFSCPPPDDFSEALSVLR 156
                     +ISR+ RPCLHA+ LGFTHP TGE +KFSCPPP D +E + +LR
Sbjct: 924  RSDQEEIIELISRMDRPCLHAIVLGFTHPCTGEIVKFSCPPPSDLAEIVGLLR 976



 Score = 90.1 bits (222), Expect(2) = 6e-56
 Identities = 42/54 (77%), Positives = 47/54 (87%)
 Frame = -3

Query: 673 DEHSHSHLAEQFKRHTIHRMYISLTSGVPYRGSGRIEIPIARDSSNRIRMAAVP 512
           DEHSH+HLAEQFK HTI R+Y+SLT+GVP    GRIEIPI RDSSNRIRMAA+P
Sbjct: 796 DEHSHAHLAEQFKLHTIERVYVSLTTGVPSPPQGRIEIPIGRDSSNRIRMAAIP 849


>ref|XP_020890530.1| RNA pseudouridine synthase 2, chloroplastic isoform X1 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 441

 Score =  156 bits (394), Expect(2) = 6e-56
 Identities = 73/113 (64%), Positives = 84/113 (74%)
 Frame = -2

Query: 494 YKVVEIFADGGSALVQWRLETGRTHQIRAHAKYLGVPLLGDELYGGTKGMAXXXXXXXXX 315
           YKV+E FA GGSALV+WRLETGRTHQIRAHAKY+GVPLLGDE+YGGTK MA         
Sbjct: 314 YKVIETFAGGGSALVEWRLETGRTHQIRAHAKYMGVPLLGDEVYGGTKSMALSLLQKRVS 373

Query: 314 XXXXXXXXRMISRLQRPCLHALYLGFTHPHTGEYLKFSCPPPDDFSEALSVLR 156
                    +ISR+ RPCLHA+ LGFTHP TGE +KFSCPPP D +E + +LR
Sbjct: 374 RSDQEEIVELISRMDRPCLHAIVLGFTHPCTGEIVKFSCPPPSDLAEIVGLLR 426



 Score = 90.1 bits (222), Expect(2) = 6e-56
 Identities = 42/54 (77%), Positives = 47/54 (87%)
 Frame = -3

Query: 673 DEHSHSHLAEQFKRHTIHRMYISLTSGVPYRGSGRIEIPIARDSSNRIRMAAVP 512
           DEHSH+HLAEQFK HTI R+Y+SLT+GVP    GRIEIPI RDSSNRIRMAA+P
Sbjct: 246 DEHSHAHLAEQFKLHTIERVYVSLTTGVPSPPQGRIEIPIGRDSSNRIRMAAIP 299


>ref|XP_017621287.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1
           [Gossypium arboreum]
          Length = 437

 Score =  156 bits (395), Expect(2) = 6e-56
 Identities = 74/124 (59%), Positives = 89/124 (71%)
 Frame = -2

Query: 494 YKVVEIFADGGSALVQWRLETGRTHQIRAHAKYLGVPLLGDELYGGTKGMAXXXXXXXXX 315
           YKV+E+ A GGSALVQWRLETGRTHQIRAHAKY+G+PLLGDE+YGGTK MA         
Sbjct: 314 YKVIEVLAGGGSALVQWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKNMALSLLRPRTP 373

Query: 314 XXXXXXXXRMISRLQRPCLHALYLGFTHPHTGEYLKFSCPPPDDFSEALSVLRSFPRQSA 135
                   R++SRL+RP LHAL LGF HPH+GE ++FSCPPP DF E L+ LR    +  
Sbjct: 374 PYYNDELSRLVSRLERPYLHALVLGFEHPHSGEKMRFSCPPPPDFGEILNHLRKIGIEKP 433

Query: 134 VSSD 123
           +S +
Sbjct: 434 ISKE 437



 Score = 89.7 bits (221), Expect(2) = 6e-56
 Identities = 41/58 (70%), Positives = 50/58 (86%)
 Frame = -3

Query: 673 DEHSHSHLAEQFKRHTIHRMYISLTSGVPYRGSGRIEIPIARDSSNRIRMAAVPVLKN 500
           DEHSH+HL+EQFK+HTI R+YISLT GVP   +GR++IPI RDS+NRIRMAAVP L +
Sbjct: 241 DEHSHAHLSEQFKQHTIQRVYISLTCGVPSASAGRVDIPIGRDSNNRIRMAAVPGLSH 298