BLASTX nr result

ID: Ophiopogon25_contig00001491 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00001491
         (396 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK72180.1| uncharacterized protein A4U43_C04F16610 [Asparagu...   152   7e-44
ref|XP_020261255.1| exosome complex exonuclease RRP46 homolog [A...   152   1e-43
ref|XP_020085452.1| exosome complex exonuclease RRP46 homolog [A...   150   6e-43
ref|XP_010244440.1| PREDICTED: exosome complex exonuclease RRP46...   150   7e-43
ref|XP_009396849.1| PREDICTED: exosome complex exonuclease RRP46...   149   3e-42
gb|OAY62669.1| Exosome complex exonuclease RRP, partial [Ananas ...   150   8e-42
ref|XP_008786334.1| PREDICTED: exosome complex exonuclease RRP46...   145   6e-41
ref|XP_006359768.1| PREDICTED: exosome complex exonuclease RRP46...   144   1e-40
ref|XP_004245172.1| PREDICTED: exosome complex exonuclease RRP46...   144   1e-40
ref|XP_020528729.1| exosome complex exonuclease RRP46 homolog is...   144   1e-40
gb|OVA08571.1| Exoribonuclease [Macleaya cordata]                     144   1e-40
dbj|GAV84610.1| RNase_PH domain-containing protein [Cephalotus f...   144   2e-40
ref|XP_019231130.1| PREDICTED: exosome complex exonuclease RRP46...   144   2e-40
ref|XP_009804503.1| PREDICTED: exosome complex exonuclease RRP46...   144   2e-40
ref|XP_015085864.1| PREDICTED: exosome complex exonuclease RRP46...   143   3e-40
gb|ERN15077.1| hypothetical protein AMTR_s00056p00044410 [Ambore...   143   3e-40
emb|CBI20856.3| unnamed protein product, partial [Vitis vinifera]     143   4e-40
ref|XP_010648497.1| PREDICTED: exosome complex exonuclease RRP46...   143   4e-40
ref|XP_022131725.1| exosome complex exonuclease RRP46 homolog is...   142   4e-40
ref|NP_190207.1| Ribosomal protein S5 domain 2-like superfamily ...   142   6e-40

>gb|ONK72180.1| uncharacterized protein A4U43_C04F16610 [Asparagus officinalis]
          Length = 223

 Score =  152 bits (384), Expect = 7e-44
 Identities = 79/110 (71%), Positives = 88/110 (80%), Gaps = 5/110 (4%)
 Frame = +1

Query: 1   LLPCAINASCAALVDAGIPLKHLAVAICCGLNESGSVILDPTLVEEQKMQAFAYLAFPNS 180
           LLPCAINASCAALVDAGIPLKHLAVAI C L E+GSVILDPTLVEEQKM A A+LAFPN 
Sbjct: 95  LLPCAINASCAALVDAGIPLKHLAVAISCALAENGSVILDPTLVEEQKMLAIAHLAFPNP 154

Query: 181 PMSVLPKSASPDEAEPIEHGIITSFTHGVMSGISY-----HGKELSNKLS 315
           P+SV+PKS++ DE +PIEHGIITS THG MS   Y      G+  S K+S
Sbjct: 155 PLSVIPKSSASDEVQPIEHGIITSVTHGAMSVRDYFNCLERGRAASAKVS 204


>ref|XP_020261255.1| exosome complex exonuclease RRP46 homolog [Asparagus officinalis]
          Length = 238

 Score =  152 bits (384), Expect = 1e-43
 Identities = 79/110 (71%), Positives = 88/110 (80%), Gaps = 5/110 (4%)
 Frame = +1

Query: 1   LLPCAINASCAALVDAGIPLKHLAVAICCGLNESGSVILDPTLVEEQKMQAFAYLAFPNS 180
           LLPCAINASCAALVDAGIPLKHLAVAI C L E+GSVILDPTLVEEQKM A A+LAFPN 
Sbjct: 110 LLPCAINASCAALVDAGIPLKHLAVAISCALAENGSVILDPTLVEEQKMLAIAHLAFPNP 169

Query: 181 PMSVLPKSASPDEAEPIEHGIITSFTHGVMSGISY-----HGKELSNKLS 315
           P+SV+PKS++ DE +PIEHGIITS THG MS   Y      G+  S K+S
Sbjct: 170 PLSVIPKSSASDEVQPIEHGIITSVTHGAMSVRDYFNCLERGRAASAKVS 219


>ref|XP_020085452.1| exosome complex exonuclease RRP46 homolog [Ananas comosus]
          Length = 239

 Score =  150 bits (379), Expect = 6e-43
 Identities = 73/95 (76%), Positives = 80/95 (84%)
 Frame = +1

Query: 1   LLPCAINASCAALVDAGIPLKHLAVAICCGLNESGSVILDPTLVEEQKMQAFAYLAFPNS 180
           LLPCAINASCAALVDAGIPLKHLAVAICCGL+E+GSVILDPT VEEQKMQAF +L FPNS
Sbjct: 118 LLPCAINASCAALVDAGIPLKHLAVAICCGLSETGSVILDPTKVEEQKMQAFMHLVFPNS 177

Query: 181 PMSVLPKSASPDEAEPIEHGIITSFTHGVMSGISY 285
           P++VLP+ +S    EP EHGIITS THG M    Y
Sbjct: 178 PLAVLPEGSSSKHDEPFEHGIITSVTHGAMPERGY 212


>ref|XP_010244440.1| PREDICTED: exosome complex exonuclease RRP46 homolog [Nelumbo
           nucifera]
          Length = 243

 Score =  150 bits (379), Expect = 7e-43
 Identities = 76/111 (68%), Positives = 89/111 (80%), Gaps = 5/111 (4%)
 Frame = +1

Query: 1   LLPCAINASCAALVDAGIPLKHLAVAICCGLNESGSVILDPTLVEEQKMQAFAYLAFPNS 180
           LLPCAINA+CAALVDAGIPLKHL+VAICC L E+G+V+LDPT +EEQKMQAFAYL FPNS
Sbjct: 115 LLPCAINAACAALVDAGIPLKHLSVAICCCLEENGTVVLDPTKLEEQKMQAFAYLVFPNS 174

Query: 181 PMSVLPKSASPDEAEPIEHGIITSFTHGVMSGISY-----HGKELSNKLSN 318
            +SVLP+  S  E+EP+EHGIITS THGVMS   Y      G+  S K+S+
Sbjct: 175 VLSVLPQGPSSVESEPLEHGIITSVTHGVMSVDDYLHCLERGRSASAKISD 225


>ref|XP_009396849.1| PREDICTED: exosome complex exonuclease RRP46 homolog [Musa
           acuminata subsp. malaccensis]
 ref|XP_018679830.1| PREDICTED: exosome complex exonuclease RRP46 homolog [Musa
           acuminata subsp. malaccensis]
          Length = 246

 Score =  149 bits (375), Expect = 3e-42
 Identities = 72/95 (75%), Positives = 79/95 (83%)
 Frame = +1

Query: 1   LLPCAINASCAALVDAGIPLKHLAVAICCGLNESGSVILDPTLVEEQKMQAFAYLAFPNS 180
           LLPCAINASCAALVDAGIPLKHLAVAICCGL E GS ILDPT  EEQK+QAFAYL FPNS
Sbjct: 118 LLPCAINASCAALVDAGIPLKHLAVAICCGLTEGGSAILDPTKAEEQKIQAFAYLVFPNS 177

Query: 181 PMSVLPKSASPDEAEPIEHGIITSFTHGVMSGISY 285
           P+S+LP + S +   PIE+GIITS THGVM  + Y
Sbjct: 178 PLSILPSAPSAEVDGPIENGIITSVTHGVMPVVDY 212


>gb|OAY62669.1| Exosome complex exonuclease RRP, partial [Ananas comosus]
          Length = 339

 Score =  150 bits (379), Expect = 8e-42
 Identities = 73/95 (76%), Positives = 80/95 (84%)
 Frame = +1

Query: 1   LLPCAINASCAALVDAGIPLKHLAVAICCGLNESGSVILDPTLVEEQKMQAFAYLAFPNS 180
           LLPCAINASCAALVDAGIPLKHLAVAICCGL+E+GSVILDPT VEEQKMQAF +L FPNS
Sbjct: 218 LLPCAINASCAALVDAGIPLKHLAVAICCGLSETGSVILDPTKVEEQKMQAFMHLVFPNS 277

Query: 181 PMSVLPKSASPDEAEPIEHGIITSFTHGVMSGISY 285
           P++VLP+ +S    EP EHGIITS THG M    Y
Sbjct: 278 PLAVLPEGSSSKHDEPFEHGIITSVTHGAMPERGY 312


>ref|XP_008786334.1| PREDICTED: exosome complex exonuclease RRP46 homolog [Phoenix
           dactylifera]
          Length = 240

 Score =  145 bits (366), Expect = 6e-41
 Identities = 77/110 (70%), Positives = 85/110 (77%), Gaps = 5/110 (4%)
 Frame = +1

Query: 1   LLPCAINASCAALVDAGIPLKHLAVAICCGLNESGSVILDPTLVEEQKMQAFAYLAFPNS 180
           LLPCAINASCAALVD+GIPLKHLAVAICCGL E+GSVILDPT  EEQKM+AFAYL FPNS
Sbjct: 115 LLPCAINASCAALVDSGIPLKHLAVAICCGLTETGSVILDPTKAEEQKMRAFAYLVFPNS 174

Query: 181 PMSVLPKSASPDEAEPIEHGIITSFTHGVMSGISY-----HGKELSNKLS 315
           P+SVLPK+ S  + EP   GIITS THG+MS   Y     HG     K+S
Sbjct: 175 PLSVLPKAPSAVDDEP---GIITSVTHGLMSECHYINCLGHGHAACAKIS 221


>ref|XP_006359768.1| PREDICTED: exosome complex exonuclease RRP46 homolog [Solanum
           tuberosum]
          Length = 238

 Score =  144 bits (364), Expect = 1e-40
 Identities = 73/116 (62%), Positives = 88/116 (75%), Gaps = 5/116 (4%)
 Frame = +1

Query: 1   LLPCAINASCAALVDAGIPLKHLAVAICCGLNESGSVILDPTLVEEQKMQAFAYLAFPNS 180
           LLPCAINA CAALVDAGIPLKHLAVAICC L ESG ++LDP+ +EEQ+M+AF YL FPNS
Sbjct: 115 LLPCAINALCAALVDAGIPLKHLAVAICCTLTESGHILLDPSKLEEQRMKAFVYLVFPNS 174

Query: 181 PMSVLPKSASPDEAEPIEHGIITSFTHGVMSGISY-----HGKELSNKLSNTFKFN 333
            +SVLP+ A     EP+EHG+ITS THGVMS   Y      G+  ++KLS+ F+ N
Sbjct: 175 TLSVLPEEALKVRGEPMEHGLITSSTHGVMSVDDYIRCLERGRAATSKLSDFFRRN 230


>ref|XP_004245172.1| PREDICTED: exosome complex exonuclease RRP46 homolog [Solanum
           lycopersicum]
          Length = 232

 Score =  144 bits (363), Expect = 1e-40
 Identities = 73/116 (62%), Positives = 88/116 (75%), Gaps = 5/116 (4%)
 Frame = +1

Query: 1   LLPCAINASCAALVDAGIPLKHLAVAICCGLNESGSVILDPTLVEEQKMQAFAYLAFPNS 180
           LLPCAINA CAALVDAGIPLKHLAVAICC L ESG ++LDP+ +EEQ+M+AF YL FPNS
Sbjct: 115 LLPCAINALCAALVDAGIPLKHLAVAICCCLTESGHILLDPSKLEEQRMKAFVYLVFPNS 174

Query: 181 PMSVLPKSASPDEAEPIEHGIITSFTHGVMSGISY-----HGKELSNKLSNTFKFN 333
            +SVLP+ A     EP+EHG+ITS THGVMS   Y      G+  ++KLS+ F+ N
Sbjct: 175 TLSVLPEEALKVRGEPMEHGLITSSTHGVMSVDDYIRCLERGRAATSKLSDFFRRN 230


>ref|XP_020528729.1| exosome complex exonuclease RRP46 homolog isoform X5 [Amborella
           trichopoda]
 ref|XP_020528730.1| exosome complex exonuclease RRP46 homolog isoform X5 [Amborella
           trichopoda]
          Length = 222

 Score =  144 bits (362), Expect = 1e-40
 Identities = 70/97 (72%), Positives = 80/97 (82%)
 Frame = +1

Query: 1   LLPCAINASCAALVDAGIPLKHLAVAICCGLNESGSVILDPTLVEEQKMQAFAYLAFPNS 180
           LLPCAINA+CAALVDAGIPLK LAVAICCG+ ESGS+ILDPT  EEQ+M AFAYL FPNS
Sbjct: 34  LLPCAINAACAALVDAGIPLKSLAVAICCGITESGSIILDPTKQEEQEMPAFAYLVFPNS 93

Query: 181 PMSVLPKSASPDEAEPIEHGIITSFTHGVMSGISYHG 291
            ++VLP +    E EP+EHGIITS THG MSG ++ G
Sbjct: 94  SLAVLPGTPPLIEGEPVEHGIITSVTHGAMSGGAFGG 130


>gb|OVA08571.1| Exoribonuclease [Macleaya cordata]
          Length = 236

 Score =  144 bits (363), Expect = 1e-40
 Identities = 74/116 (63%), Positives = 87/116 (75%), Gaps = 5/116 (4%)
 Frame = +1

Query: 1   LLPCAINASCAALVDAGIPLKHLAVAICCGLNESGSVILDPTLVEEQKMQAFAYLAFPNS 180
           LLPCAINA+CAALVDAGIPLKHLAV+ICCGL+E+GSVILDPT VEEQ +QAF YL FPNS
Sbjct: 108 LLPCAINAACAALVDAGIPLKHLAVSICCGLSENGSVILDPTKVEEQNLQAFTYLVFPNS 167

Query: 181 PMSVLPKSASPDEAEPIEHGIITSFTHGVMSGISY-----HGKELSNKLSNTFKFN 333
             SV+P+ +   E EP+EHGIITS T G MS   Y      G+  S+K+S   + N
Sbjct: 168 VHSVVPEESLRVEGEPMEHGIITSVTRGAMSVDDYLNCLDRGRSASSKMSEFLRRN 223


>dbj|GAV84610.1| RNase_PH domain-containing protein [Cephalotus follicularis]
          Length = 243

 Score =  144 bits (363), Expect = 2e-40
 Identities = 75/110 (68%), Positives = 86/110 (78%), Gaps = 5/110 (4%)
 Frame = +1

Query: 1   LLPCAINASCAALVDAGIPLKHLAVAICCGLNESGSVILDPTLVEEQKMQAFAYLAFPNS 180
           LLPCAINA+CAALVDAGIPLKHLAVAICC L ESG+VILDPT++EEQK++AF YL FPNS
Sbjct: 115 LLPCAINAACAALVDAGIPLKHLAVAICCCLAESGNVILDPTMLEEQKLRAFVYLVFPNS 174

Query: 181 PMSVLPKSASPDEAEPIEHGIITSFTHGVMSGISY-----HGKELSNKLS 315
            +SVLP+ +   + EPIEHGIITS THG+MS   Y      G   S KLS
Sbjct: 175 VLSVLPEGSLLVDGEPIEHGIITSVTHGLMSVDDYCQCLERGHAASAKLS 224


>ref|XP_019231130.1| PREDICTED: exosome complex exonuclease RRP46 homolog [Nicotiana
           attenuata]
 gb|OIT06533.1| exosome complex exonuclease rrp46-like protein [Nicotiana
           attenuata]
          Length = 243

 Score =  144 bits (362), Expect = 2e-40
 Identities = 72/111 (64%), Positives = 85/111 (76%), Gaps = 5/111 (4%)
 Frame = +1

Query: 1   LLPCAINASCAALVDAGIPLKHLAVAICCGLNESGSVILDPTLVEEQKMQAFAYLAFPNS 180
           LLPCAINA CAALVDAGIPLKHLAVAICC L ESG ++LDP+ +EEQKM+AF YL FPNS
Sbjct: 115 LLPCAINAVCAALVDAGIPLKHLAVAICCSLAESGHILLDPSKLEEQKMKAFVYLVFPNS 174

Query: 181 PMSVLPKSASPDEAEPIEHGIITSFTHGVMSGISY-----HGKELSNKLSN 318
            +SVLP+ +     EP+EHG+ITSFTHGVMS   Y      G+  + KLS+
Sbjct: 175 TLSVLPEESLKVRGEPMEHGLITSFTHGVMSVDDYIRCLERGRAATGKLSD 225


>ref|XP_009804503.1| PREDICTED: exosome complex exonuclease RRP46 homolog [Nicotiana
           sylvestris]
 ref|XP_016471631.1| PREDICTED: exosome complex exonuclease RRP46 homolog [Nicotiana
           tabacum]
          Length = 243

 Score =  144 bits (362), Expect = 2e-40
 Identities = 72/111 (64%), Positives = 85/111 (76%), Gaps = 5/111 (4%)
 Frame = +1

Query: 1   LLPCAINASCAALVDAGIPLKHLAVAICCGLNESGSVILDPTLVEEQKMQAFAYLAFPNS 180
           LLPCAINA CAALVDAGIPLKHLAVAICC L ESG ++LDP+ +EEQKM+AF YL FPNS
Sbjct: 115 LLPCAINAVCAALVDAGIPLKHLAVAICCSLAESGHILLDPSKLEEQKMKAFVYLVFPNS 174

Query: 181 PMSVLPKSASPDEAEPIEHGIITSFTHGVMSGISY-----HGKELSNKLSN 318
            +SVLP+ +     EP+EHG+ITSFTHGVMS   Y      G+  + KLS+
Sbjct: 175 TLSVLPEESLKVRGEPMEHGLITSFTHGVMSVDDYIRCLERGRAATGKLSD 225


>ref|XP_015085864.1| PREDICTED: exosome complex exonuclease RRP46 homolog [Solanum
           pennellii]
          Length = 232

 Score =  143 bits (361), Expect = 3e-40
 Identities = 73/116 (62%), Positives = 87/116 (75%), Gaps = 5/116 (4%)
 Frame = +1

Query: 1   LLPCAINASCAALVDAGIPLKHLAVAICCGLNESGSVILDPTLVEEQKMQAFAYLAFPNS 180
           LLPCAINA CAALVDAGIPLKHLAVAICC L ESG ++LDP+ +EEQ+M AF YL FPNS
Sbjct: 115 LLPCAINALCAALVDAGIPLKHLAVAICCCLTESGHILLDPSKLEEQRMTAFVYLVFPNS 174

Query: 181 PMSVLPKSASPDEAEPIEHGIITSFTHGVMSGISY-----HGKELSNKLSNTFKFN 333
            +SVLP+ A     EP+EHG+ITS THGVMS   Y      G+  ++KLS+ F+ N
Sbjct: 175 TLSVLPEEALKVRGEPMEHGLITSSTHGVMSVDDYIRCLERGRAATSKLSDFFRRN 230


>gb|ERN15077.1| hypothetical protein AMTR_s00056p00044410 [Amborella trichopoda]
          Length = 229

 Score =  143 bits (360), Expect = 3e-40
 Identities = 75/116 (64%), Positives = 85/116 (73%), Gaps = 5/116 (4%)
 Frame = +1

Query: 1   LLPCAINASCAALVDAGIPLKHLAVAICCGLNESGSVILDPTLVEEQKMQAFAYLAFPNS 180
           LLPCAINA+CAALVDAGIPLK LAVAICCG+ ESGS+ILDPT  EEQ+M AFAYL FPNS
Sbjct: 100 LLPCAINAACAALVDAGIPLKSLAVAICCGITESGSIILDPTKQEEQEMPAFAYLVFPNS 159

Query: 181 PMSVLPKSASPDEAEPIEHGIITSFTHGVMSGISY-----HGKELSNKLSNTFKFN 333
            ++VLP +    E EP+EHGIITS THG MS   Y      G+  S KLS   + N
Sbjct: 160 SLAVLPGTPPLIEGEPVEHGIITSVTHGAMSVDDYFDCLDRGRVASAKLSEFLRKN 215


>emb|CBI20856.3| unnamed protein product, partial [Vitis vinifera]
          Length = 243

 Score =  143 bits (361), Expect = 4e-40
 Identities = 75/110 (68%), Positives = 85/110 (77%), Gaps = 5/110 (4%)
 Frame = +1

Query: 1   LLPCAINASCAALVDAGIPLKHLAVAICCGLNESGSVILDPTLVEEQKMQAFAYLAFPNS 180
           LLPCAINA+CAALVDA IPLKHLAVAICC L ESG VILDPT VEEQKM+AFAYL FPNS
Sbjct: 115 LLPCAINAACAALVDAAIPLKHLAVAICCCLTESGYVILDPTKVEEQKMKAFAYLVFPNS 174

Query: 181 PMSVLPKSASPDEAEPIEHGIITSFTHGVMSGISY-----HGKELSNKLS 315
            +S++P+ +S  E E +EHGIITS THGVMS   Y      G+  S K+S
Sbjct: 175 AISIIPEGSSHMEGELMEHGIITSVTHGVMSVDDYLHCLERGQAASTKMS 224


>ref|XP_010648497.1| PREDICTED: exosome complex exonuclease RRP46 homolog [Vitis
           vinifera]
 ref|XP_010648498.1| PREDICTED: exosome complex exonuclease RRP46 homolog [Vitis
           vinifera]
          Length = 245

 Score =  143 bits (361), Expect = 4e-40
 Identities = 75/110 (68%), Positives = 85/110 (77%), Gaps = 5/110 (4%)
 Frame = +1

Query: 1   LLPCAINASCAALVDAGIPLKHLAVAICCGLNESGSVILDPTLVEEQKMQAFAYLAFPNS 180
           LLPCAINA+CAALVDA IPLKHLAVAICC L ESG VILDPT VEEQKM+AFAYL FPNS
Sbjct: 117 LLPCAINAACAALVDAAIPLKHLAVAICCCLTESGYVILDPTKVEEQKMKAFAYLVFPNS 176

Query: 181 PMSVLPKSASPDEAEPIEHGIITSFTHGVMSGISY-----HGKELSNKLS 315
            +S++P+ +S  E E +EHGIITS THGVMS   Y      G+  S K+S
Sbjct: 177 AISIIPEGSSHMEGELMEHGIITSVTHGVMSVDDYLHCLERGQAASTKMS 226


>ref|XP_022131725.1| exosome complex exonuclease RRP46 homolog isoform X2 [Momordica
           charantia]
          Length = 197

 Score =  142 bits (357), Expect = 4e-40
 Identities = 73/111 (65%), Positives = 86/111 (77%), Gaps = 5/111 (4%)
 Frame = +1

Query: 1   LLPCAINASCAALVDAGIPLKHLAVAICCGLNESGSVILDPTLVEEQKMQAFAYLAFPNS 180
           LLPCAINASCAALVDAGIPLKHLAVAICC L+ESG VILDPT +EEQKM+AF +L FPNS
Sbjct: 69  LLPCAINASCAALVDAGIPLKHLAVAICCCLSESGYVILDPTKLEEQKMKAFVHLVFPNS 128

Query: 181 PMSVLPKSASPDEAEPIEHGIITSFTHGVMSGISY-----HGKELSNKLSN 318
           P+SV+PK ++    EP+EHGIITS T G MS   Y      G+  + K+S+
Sbjct: 129 PVSVIPKGSTQVVDEPLEHGIITSVTQGAMSVDDYIHCLERGRAATAKMSD 179


>ref|NP_190207.1| Ribosomal protein S5 domain 2-like superfamily protein [Arabidopsis
           thaliana]
 ref|NP_001030817.1| Ribosomal protein S5 domain 2-like superfamily protein [Arabidopsis
           thaliana]
 ref|NP_001030818.1| Ribosomal protein S5 domain 2-like superfamily protein [Arabidopsis
           thaliana]
 ref|NP_001030819.1| Ribosomal protein S5 domain 2-like superfamily protein [Arabidopsis
           thaliana]
 ref|NP_001078250.1| Ribosomal protein S5 domain 2-like superfamily protein [Arabidopsis
           thaliana]
 ref|NP_001190019.1| Ribosomal protein S5 domain 2-like superfamily protein [Arabidopsis
           thaliana]
 ref|NP_001325681.1| Ribosomal protein S5 domain 2-like superfamily protein [Arabidopsis
           thaliana]
 sp|Q9LX74.1|EXOS5_ARATH RecName: Full=Exosome complex exonuclease RRP46 homolog; AltName:
           Full=Exosome component 5; AltName: Full=Ribosomal
           RNA-processing protein 46
 emb|CAB90948.1| putative protein [Arabidopsis thaliana]
 gb|AAO24557.1| At3g46210 [Arabidopsis thaliana]
 dbj|BAF00127.1| hypothetical protein [Arabidopsis thaliana]
 dbj|BAH19939.1| AT3G46210 [Arabidopsis thaliana]
 dbj|BAH20201.1| AT3G46210 [Arabidopsis thaliana]
 gb|AEE78129.1| Ribosomal protein S5 domain 2-like superfamily protein [Arabidopsis
           thaliana]
 gb|AEE78130.1| Ribosomal protein S5 domain 2-like superfamily protein [Arabidopsis
           thaliana]
 gb|AEE78131.1| Ribosomal protein S5 domain 2-like superfamily protein [Arabidopsis
           thaliana]
 gb|AEE78132.1| Ribosomal protein S5 domain 2-like superfamily protein [Arabidopsis
           thaliana]
 gb|AEE78133.1| Ribosomal protein S5 domain 2-like superfamily protein [Arabidopsis
           thaliana]
 gb|AEE78134.1| Ribosomal protein S5 domain 2-like superfamily protein [Arabidopsis
           thaliana]
 gb|ANM63606.1| Ribosomal protein S5 domain 2-like superfamily protein [Arabidopsis
           thaliana]
          Length = 239

 Score =  142 bits (359), Expect = 6e-40
 Identities = 74/122 (60%), Positives = 90/122 (73%), Gaps = 5/122 (4%)
 Frame = +1

Query: 1   LLPCAINASCAALVDAGIPLKHLAVAICCGLNESGSVILDPTLVEEQKMQAFAYLAFPNS 180
           LLPCAINA+CAALVDAGIP+KHLAVAICC L E+G ++LDP  +EE+KM AFAYL FPN+
Sbjct: 115 LLPCAINAACAALVDAGIPMKHLAVAICCCLAENGYLVLDPNKLEEKKMTAFAYLVFPNT 174

Query: 181 PMSVLPKSASPDEAEPIEHGIITSFTHGVMSGISY-----HGKELSNKLSNTFKFNESFC 345
            +SVLP+ +S  E EP+EHGIITS THGVMS   Y     +G+  +  LS  F+ N    
Sbjct: 175 TLSVLPEGSSVAEGEPVEHGIITSITHGVMSVDDYFLCVENGRAATASLSAFFRKNFQQS 234

Query: 346 SS 351
           SS
Sbjct: 235 SS 236


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