BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00001059
         (638 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020261870.1| DNA-directed RNA polymerase II subunit 4 [As...    97   3e-22
ref|XP_020691757.1| DNA-directed RNA polymerase II subunit 4 iso...    92   3e-20
ref|XP_020590851.1| DNA-directed RNA polymerase II subunit 4 iso...    92   3e-20
ref|XP_020691755.1| DNA-directed RNA polymerase II subunit 4 iso...    92   3e-20
ref|XP_010940283.1| PREDICTED: DNA-directed RNA polymerase II su...    91   1e-19
ref|XP_020691754.1| DNA-directed RNA polymerase II subunit 4 iso...    92   1e-19
ref|XP_020691752.1| DNA-directed RNA polymerase II subunit 4 iso...    92   1e-19
ref|XP_020092257.1| DNA-directed RNA polymerase II subunit 4 [An...    90   2e-19
ref|XP_009398052.1| PREDICTED: DNA-directed RNA polymerase II su...    90   2e-19
ref|XP_008813022.1| PREDICTED: DNA-directed RNA polymerase II su...    90   3e-19
gb|PKA51573.1| hypothetical protein AXF42_Ash002940 [Apostasia s...    89   4e-19
gb|KMZ56185.1| DNA-directed RNA polymerase II subunit 4 [Zostera...    89   6e-19
ref|XP_019055048.1| PREDICTED: DNA-directed RNA polymerase II su...    89   6e-19
ref|XP_010261089.1| PREDICTED: DNA-directed RNA polymerase II su...    89   6e-19
ref|XP_006361114.1| PREDICTED: DNA-directed RNA polymerase II su...    89   6e-19
ref|XP_006847979.1| DNA-directed RNA polymerase II subunit 4 [Am...    89   6e-19
ref|XP_021684994.1| DNA-directed RNA polymerase II subunit 4-lik...    88   1e-18
ref|XP_004241362.1| PREDICTED: DNA-directed RNA polymerase II su...    88   1e-18
gb|PNT35639.1| hypothetical protein POPTR_005G084900v3 [Populus ...    86   1e-18
ref|XP_008362431.1| PREDICTED: DNA-directed RNA polymerase II su...    86   2e-18

>ref|XP_020261870.1| DNA-directed RNA polymerase II subunit 4 [Asparagus officinalis]
 gb|ONK81688.1| uncharacterized protein A4U43_C01F31860 [Asparagus officinalis]
          Length = 138

 Score = 97.4 bits (241), Expect = 3e-22
 Identities = 46/52 (88%), Positives = 49/52 (94%)
 Frame = -1

Query: 158 LKAKCLMNGEVARILDKKFEHLQQMSDDPTNQISQVFEKSHQYVKRFSRFKN 3
           LKAKCLMNGEVARILDK+ + LQQ SDDP+NQISQVFEKSHQYVKRFSRFKN
Sbjct: 19  LKAKCLMNGEVARILDKRLDQLQQFSDDPSNQISQVFEKSHQYVKRFSRFKN 70


>ref|XP_020691757.1| DNA-directed RNA polymerase II subunit 4 isoform X5 [Dendrobium
           catenatum]
          Length = 138

 Score = 92.4 bits (228), Expect = 3e-20
 Identities = 44/52 (84%), Positives = 48/52 (92%)
 Frame = -1

Query: 158 LKAKCLMNGEVARILDKKFEHLQQMSDDPTNQISQVFEKSHQYVKRFSRFKN 3
           LKAKCLMN EVA ILD++ E LQQMSDDPTNQ+SQVFEKSHQYVKRFSR+KN
Sbjct: 19  LKAKCLMNCEVALILDRRLEQLQQMSDDPTNQMSQVFEKSHQYVKRFSRYKN 70


>ref|XP_020590851.1| DNA-directed RNA polymerase II subunit 4 isoform X2 [Phalaenopsis
           equestris]
          Length = 138

 Score = 92.4 bits (228), Expect = 3e-20
 Identities = 44/52 (84%), Positives = 48/52 (92%)
 Frame = -1

Query: 158 LKAKCLMNGEVARILDKKFEHLQQMSDDPTNQISQVFEKSHQYVKRFSRFKN 3
           LKAKCLMN EVA ILD++ E LQQMSDDPTNQ+SQVFEKSHQYVKRFSR+KN
Sbjct: 19  LKAKCLMNCEVALILDRRLEQLQQMSDDPTNQMSQVFEKSHQYVKRFSRYKN 70


>ref|XP_020691755.1| DNA-directed RNA polymerase II subunit 4 isoform X3 [Dendrobium
           catenatum]
 ref|XP_020691756.1| DNA-directed RNA polymerase II subunit 4 isoform X4 [Dendrobium
           catenatum]
          Length = 139

 Score = 92.4 bits (228), Expect = 3e-20
 Identities = 44/52 (84%), Positives = 48/52 (92%)
 Frame = -1

Query: 158 LKAKCLMNGEVARILDKKFEHLQQMSDDPTNQISQVFEKSHQYVKRFSRFKN 3
           LKAKCLMN EVA ILD++ E LQQMSDDPTNQ+SQVFEKSHQYVKRFSR+KN
Sbjct: 19  LKAKCLMNCEVALILDRRLEQLQQMSDDPTNQMSQVFEKSHQYVKRFSRYKN 70


>ref|XP_010940283.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 [Elaeis
           guineensis]
          Length = 138

 Score = 90.9 bits (224), Expect = 1e-19
 Identities = 44/52 (84%), Positives = 48/52 (92%)
 Frame = -1

Query: 158 LKAKCLMNGEVARILDKKFEHLQQMSDDPTNQISQVFEKSHQYVKRFSRFKN 3
           LKAKCLMN EVA ILD+K+E LQQ+SDDPTNQISQVFEKS QYVKRFSR+KN
Sbjct: 19  LKAKCLMNCEVALILDRKYEQLQQLSDDPTNQISQVFEKSMQYVKRFSRYKN 70


>ref|XP_020691754.1| DNA-directed RNA polymerase II subunit 4 isoform X2 [Dendrobium
           catenatum]
 gb|PKU87537.1| hypothetical protein MA16_Dca018068 [Dendrobium catenatum]
          Length = 201

 Score = 92.4 bits (228), Expect = 1e-19
 Identities = 44/52 (84%), Positives = 48/52 (92%)
 Frame = -1

Query: 158 LKAKCLMNGEVARILDKKFEHLQQMSDDPTNQISQVFEKSHQYVKRFSRFKN 3
           LKAKCLMN EVA ILD++ E LQQMSDDPTNQ+SQVFEKSHQYVKRFSR+KN
Sbjct: 82  LKAKCLMNCEVALILDRRLEQLQQMSDDPTNQMSQVFEKSHQYVKRFSRYKN 133


>ref|XP_020691752.1| DNA-directed RNA polymerase II subunit 4 isoform X1 [Dendrobium
           catenatum]
          Length = 202

 Score = 92.4 bits (228), Expect = 1e-19
 Identities = 44/52 (84%), Positives = 48/52 (92%)
 Frame = -1

Query: 158 LKAKCLMNGEVARILDKKFEHLQQMSDDPTNQISQVFEKSHQYVKRFSRFKN 3
           LKAKCLMN EVA ILD++ E LQQMSDDPTNQ+SQVFEKSHQYVKRFSR+KN
Sbjct: 82  LKAKCLMNCEVALILDRRLEQLQQMSDDPTNQMSQVFEKSHQYVKRFSRYKN 133


>ref|XP_020092257.1| DNA-directed RNA polymerase II subunit 4 [Ananas comosus]
 gb|OAY65650.1| DNA-directed RNA polymerase II subunit 4 [Ananas comosus]
 gb|OAY65654.1| DNA-directed RNA polymerase II subunit 4 [Ananas comosus]
          Length = 138

 Score = 90.1 bits (222), Expect = 2e-19
 Identities = 45/52 (86%), Positives = 47/52 (90%)
 Frame = -1

Query: 158 LKAKCLMNGEVARILDKKFEHLQQMSDDPTNQISQVFEKSHQYVKRFSRFKN 3
           LKAKCLMN EVA ILD K+E LQQMSDDPTNQISQVFEKS QYVKRFSR+KN
Sbjct: 19  LKAKCLMNCEVAIILDHKYEQLQQMSDDPTNQISQVFEKSLQYVKRFSRYKN 70


>ref|XP_009398052.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 [Musa acuminata
           subsp. malaccensis]
          Length = 138

 Score = 90.1 bits (222), Expect = 2e-19
 Identities = 44/52 (84%), Positives = 47/52 (90%)
 Frame = -1

Query: 158 LKAKCLMNGEVARILDKKFEHLQQMSDDPTNQISQVFEKSHQYVKRFSRFKN 3
           LKAKCLMN EVARILD K++ LQQ SDDPTNQISQVFEKS QYVKRFSR+KN
Sbjct: 19  LKAKCLMNCEVARILDHKYDQLQQTSDDPTNQISQVFEKSMQYVKRFSRYKN 70


>ref|XP_008813022.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 [Phoenix
           dactylifera]
          Length = 138

 Score = 89.7 bits (221), Expect = 3e-19
 Identities = 43/52 (82%), Positives = 48/52 (92%)
 Frame = -1

Query: 158 LKAKCLMNGEVARILDKKFEHLQQMSDDPTNQISQVFEKSHQYVKRFSRFKN 3
           L+AKCLMN EVA ILD+K+E LQQ+SDDPTNQISQVFEKS QYVKRFSR+KN
Sbjct: 19  LRAKCLMNCEVALILDRKYEQLQQLSDDPTNQISQVFEKSMQYVKRFSRYKN 70


>gb|PKA51573.1| hypothetical protein AXF42_Ash002940 [Apostasia shenzhenica]
          Length = 138

 Score = 89.4 bits (220), Expect = 4e-19
 Identities = 43/52 (82%), Positives = 47/52 (90%)
 Frame = -1

Query: 158 LKAKCLMNGEVARILDKKFEHLQQMSDDPTNQISQVFEKSHQYVKRFSRFKN 3
           LKAKCLMN EVA ILD++ E LQQMSDD TNQ+SQVFEKSHQYVKRFSR+KN
Sbjct: 19  LKAKCLMNCEVALILDRRLEQLQQMSDDSTNQMSQVFEKSHQYVKRFSRYKN 70


>gb|KMZ56185.1| DNA-directed RNA polymerase II subunit 4 [Zostera marina]
          Length = 138

 Score = 89.0 bits (219), Expect = 6e-19
 Identities = 41/52 (78%), Positives = 48/52 (92%)
 Frame = -1

Query: 158 LKAKCLMNGEVARILDKKFEHLQQMSDDPTNQISQVFEKSHQYVKRFSRFKN 3
           LKAKCLMNGEVA+ILD K++ L+Q+SDDP NQ+SQVFEKS QYVKRFSR+KN
Sbjct: 19  LKAKCLMNGEVAQILDHKYQQLEQISDDPMNQMSQVFEKSQQYVKRFSRYKN 70


>ref|XP_019055048.1| PREDICTED: DNA-directed RNA polymerase II subunit 4-like [Nelumbo
           nucifera]
          Length = 138

 Score = 89.0 bits (219), Expect = 6e-19
 Identities = 42/52 (80%), Positives = 48/52 (92%)
 Frame = -1

Query: 158 LKAKCLMNGEVARILDKKFEHLQQMSDDPTNQISQVFEKSHQYVKRFSRFKN 3
           LKAKCLMN EV+ ILD+++E LQQMSDDPTNQ+SQVFEKS QYVKRFSR+KN
Sbjct: 19  LKAKCLMNCEVSLILDRRYEQLQQMSDDPTNQVSQVFEKSLQYVKRFSRYKN 70


>ref|XP_010261089.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 isoform X1
           [Nelumbo nucifera]
          Length = 138

 Score = 89.0 bits (219), Expect = 6e-19
 Identities = 43/52 (82%), Positives = 47/52 (90%)
 Frame = -1

Query: 158 LKAKCLMNGEVARILDKKFEHLQQMSDDPTNQISQVFEKSHQYVKRFSRFKN 3
           LKAKCLMN EVA ILD+K+E LQQMSDDP NQ+SQVFEKS QYVKRFSR+KN
Sbjct: 19  LKAKCLMNCEVALILDRKYEQLQQMSDDPMNQVSQVFEKSLQYVKRFSRYKN 70


>ref|XP_006361114.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 [Solanum
           tuberosum]
          Length = 138

 Score = 89.0 bits (219), Expect = 6e-19
 Identities = 44/52 (84%), Positives = 47/52 (90%)
 Frame = -1

Query: 158 LKAKCLMNGEVARILDKKFEHLQQMSDDPTNQISQVFEKSHQYVKRFSRFKN 3
           LKAKCLMN EVA IL+ K+E LQQMSDDPTNQISQVFEKS QYVKRFSR+KN
Sbjct: 19  LKAKCLMNCEVALILEHKYEQLQQMSDDPTNQISQVFEKSLQYVKRFSRYKN 70


>ref|XP_006847979.1| DNA-directed RNA polymerase II subunit 4 [Amborella trichopoda]
 ref|XP_011624688.1| DNA-directed RNA polymerase II subunit 4 [Amborella trichopoda]
 gb|ERN09560.1| hypothetical protein AMTR_s00029p00159420 [Amborella trichopoda]
          Length = 139

 Score = 89.0 bits (219), Expect = 6e-19
 Identities = 44/52 (84%), Positives = 47/52 (90%)
 Frame = -1

Query: 158 LKAKCLMNGEVARILDKKFEHLQQMSDDPTNQISQVFEKSHQYVKRFSRFKN 3
           LKAKCLMN EVA ILD K+E LQQMSDDP+NQISQVFEKS QYVKRFSR+KN
Sbjct: 19  LKAKCLMNCEVALILDHKYEQLQQMSDDPSNQISQVFEKSLQYVKRFSRYKN 70


>ref|XP_021684994.1| DNA-directed RNA polymerase II subunit 4-like [Hevea brasiliensis]
          Length = 138

 Score = 88.2 bits (217), Expect = 1e-18
 Identities = 44/52 (84%), Positives = 46/52 (88%)
 Frame = -1

Query: 158 LKAKCLMNGEVARILDKKFEHLQQMSDDPTNQISQVFEKSHQYVKRFSRFKN 3
           LKAKCLMN EVA ILD K+E LQQMSDDP NQISQVFEKS QYVKRFSR+KN
Sbjct: 19  LKAKCLMNCEVALILDHKYEQLQQMSDDPMNQISQVFEKSLQYVKRFSRYKN 70


>ref|XP_004241362.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 [Solanum
           lycopersicum]
 ref|XP_015077384.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 [Solanum
           pennellii]
          Length = 138

 Score = 88.2 bits (217), Expect = 1e-18
 Identities = 43/52 (82%), Positives = 47/52 (90%)
 Frame = -1

Query: 158 LKAKCLMNGEVARILDKKFEHLQQMSDDPTNQISQVFEKSHQYVKRFSRFKN 3
           LKAKCLMN EVA IL+ K+E +QQMSDDPTNQISQVFEKS QYVKRFSR+KN
Sbjct: 19  LKAKCLMNCEVALILEHKYEQIQQMSDDPTNQISQVFEKSLQYVKRFSRYKN 70


>gb|PNT35639.1| hypothetical protein POPTR_005G084900v3 [Populus trichocarpa]
          Length = 81

 Score = 86.3 bits (212), Expect = 1e-18
 Identities = 42/52 (80%), Positives = 46/52 (88%)
 Frame = -1

Query: 158 LKAKCLMNGEVARILDKKFEHLQQMSDDPTNQISQVFEKSHQYVKRFSRFKN 3
           LKAKCLMN EVA IL+ K+E LQQMSDDP NQ+SQVFEKS QYVKRFSR+KN
Sbjct: 19  LKAKCLMNCEVALILEHKYEQLQQMSDDPMNQVSQVFEKSLQYVKRFSRYKN 70


>ref|XP_008362431.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 [Malus
           domestica]
          Length = 96

 Score = 86.3 bits (212), Expect = 2e-18
 Identities = 42/52 (80%), Positives = 46/52 (88%)
 Frame = -1

Query: 158 LKAKCLMNGEVARILDKKFEHLQQMSDDPTNQISQVFEKSHQYVKRFSRFKN 3
           LKAKCLMN EV+ IL+ KFE LQQMSDDP NQ+SQVFEKS QYVKRFSR+KN
Sbjct: 19  LKAKCLMNCEVSLILEHKFEQLQQMSDDPRNQVSQVFEKSLQYVKRFSRYKN 70