BLASTX nr result

ID: Ophiopogon24_contig00039395 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00039395
         (388 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK64342.1| uncharacterized protein A4U43_C07F24700 [Asparagu...    63   2e-09
ref|XP_020275692.1| RNA-binding protein 24 [Asparagus officinali...    63   4e-09

>gb|ONK64342.1| uncharacterized protein A4U43_C07F24700 [Asparagus officinalis]
          Length = 195

 Score = 62.8 bits (151), Expect = 2e-09
 Identities = 40/97 (41%), Positives = 46/97 (47%), Gaps = 3/97 (3%)
 Frame = -2

Query: 387 GYSQENMYPMNYYGVXXXXXXXQFMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG-- 214
           GYSQE+MYPMNY+G+       Q                                     
Sbjct: 80  GYSQESMYPMNYFGIGAQQQQQQQFAAYYPSAAAAAANPGVFANYYPYYAQYSQSAQAHS 139

Query: 213 -FGLHYHPQMLQYPYLSQQFGSAGSSAILSLPAASVA 106
            FGLHY PQMLQYPYL QQFGS  S+ ILSLPA++ A
Sbjct: 140 GFGLHY-PQMLQYPYLPQQFGSGSSTPILSLPASNAA 175


>ref|XP_020275692.1| RNA-binding protein 24 [Asparagus officinalis]
 ref|XP_020275693.1| RNA-binding protein 24 [Asparagus officinalis]
          Length = 264

 Score = 62.8 bits (151), Expect = 4e-09
 Identities = 40/97 (41%), Positives = 46/97 (47%), Gaps = 3/97 (3%)
 Frame = -2

Query: 387 GYSQENMYPMNYYGVXXXXXXXQFMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG-- 214
           GYSQE+MYPMNY+G+       Q                                     
Sbjct: 149 GYSQESMYPMNYFGIGAQQQQQQQFAAYYPSAAAAAANPGVFANYYPYYAQYSQSAQAHS 208

Query: 213 -FGLHYHPQMLQYPYLSQQFGSAGSSAILSLPAASVA 106
            FGLHY PQMLQYPYL QQFGS  S+ ILSLPA++ A
Sbjct: 209 GFGLHY-PQMLQYPYLPQQFGSGSSTPILSLPASNAA 244


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