BLASTX nr result

ID: Ophiopogon24_contig00039267 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00039267
         (874 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020268188.1| eukaryotic translation initiation factor 4B2...    99   7e-21

>ref|XP_020268188.1| eukaryotic translation initiation factor 4B2-like [Asparagus
           officinalis]
 gb|ONK67574.1| uncharacterized protein A4U43_C05F1450 [Asparagus officinalis]
          Length = 264

 Score = 99.4 bits (246), Expect = 7e-21
 Identities = 77/201 (38%), Positives = 100/201 (49%), Gaps = 6/201 (2%)
 Frame = +2

Query: 62  EQKKPYPAENTSLVVPPIMYAPKNIMALMVQIRRGRKDLMDAPLENSCGAHHIMYKEPII 241
           EQ KP P +N S +VPPIMYAP+NIM LM QIR+ R+D+  +  +    ++    K+P +
Sbjct: 89  EQNKPRP-QNPSPLVPPIMYAPRNIMTLMEQIRKDRRDVASSS-DVKSQSYVKKKKKPAV 146

Query: 242 PREEYYSDSRYERNCFGEKLFVADQQMHSNRRRQILSDLNTERANYEKYCNGGEKYIPGN 421
           P EE  S SR                    RRRQ+L D+N ERAN E            N
Sbjct: 147 PAEE-NSSSRC-------------------RRRQVLVDVNAERANLE------------N 174

Query: 422 YGAEIRLS-----TPARHCSGYRICDAERGGSNGRGLRS-AGYGVRERTNPCTIRDEGLD 583
           Y A++R S           +  R CD  R  S+GRGL S AGYGVRER N   + +  +D
Sbjct: 175 YRADMRKSFTCGDRKPEKTTSIRNCDGNRNSSSGRGLESEAGYGVRERVNSGDLSNRCVD 234

Query: 584 MRNDAISTKRRLAAMQPGPCH 646
            R   I  KRR +  + G  H
Sbjct: 235 TRG-KIRMKRRASMAETGTRH 254


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