BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00038991
         (455 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PON33692.1| hypothetical protein PanWU01x14_350640, partial [...   115   4e-31
gb|PON48831.1| hypothetical protein PanWU01x14_235340 [Parasponi...   110   9e-31
emb|CAN65504.1| hypothetical protein VITISV_028342 [Vitis vinifera]   113   3e-30
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...   109   6e-30
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group...   115   1e-29
gb|POF25367.1| retrovirus-related pol polyprotein from transposo...   114   1e-29
emb|CAN67337.1| hypothetical protein VITISV_004415 [Vitis vinifera]   113   2e-29
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]              111   2e-29
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]              111   2e-29
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]              111   2e-29
gb|KYP59064.1| Retrovirus-related Pol polyprotein from transposo...   107   3e-29
dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]                             111   3e-29
emb|CAN69974.1| hypothetical protein VITISV_014388 [Vitis vinifera]   113   3e-29
gb|KOM47916.1| hypothetical protein LR48_Vigan07g162000 [Vigna a...   111   4e-29
emb|CAN71224.1| hypothetical protein VITISV_006366 [Vitis vinifera]   113   5e-29
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-...   108   5e-29
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc...   108   5e-29
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc...   108   5e-29
emb|CAN71029.1| hypothetical protein VITISV_001707 [Vitis vinifera]   113   5e-29
emb|CAN74341.1| hypothetical protein VITISV_043997 [Vitis vinifera]   113   5e-29

>gb|PON33692.1| hypothetical protein PanWU01x14_350640, partial [Parasponia
           andersonii]
          Length = 243

 Score =  115 bits (287), Expect(2) = 4e-31
 Identities = 53/91 (58%), Positives = 68/91 (74%)
 Frame = +2

Query: 2   SKVAYASVVDSLMYIMVCTWPDIVQAVKVVSRYMSNSGKEHWNTVKWVVRYLREMSDHAI 181
           +KV Y+S + SLMY MVCT PDI  AV VVSRYMSN GK+HW  VKW++RYLR  S+ ++
Sbjct: 52  AKVPYSSAIGSLMYAMVCTRPDIAHAVGVVSRYMSNLGKQHWEAVKWILRYLRGTSNMSL 111

Query: 182 VYGRTDLRLKGYVDADFAGDADSRRSITDCV 274
            + ++D+ L+GYVDAD AGD D R+S T  V
Sbjct: 112 CFKKSDMGLQGYVDADMAGDVDGRKSTTGYV 142



 Score = 47.4 bits (111), Expect(2) = 4e-31
 Identities = 24/48 (50%), Positives = 32/48 (66%)
 Frame = +3

Query: 270 VFTFRSGVVSWMLKL*SIMSLSTKEAEYMVTSEVSKELL*LKTFFGEL 413
           VFT     V W+ KL  I++LST EAEY+  +E SKEL+ L++F  EL
Sbjct: 142 VFTLGGTAVGWVSKLQKIVALSTTEAEYVAVTEASKELIWLQSFLEEL 189


>gb|PON48831.1| hypothetical protein PanWU01x14_235340 [Parasponia andersonii]
          Length = 222

 Score =  110 bits (274), Expect(2) = 9e-31
 Identities = 50/91 (54%), Positives = 66/91 (72%)
 Frame = +2

Query: 2   SKVAYASVVDSLMYIMVCTWPDIVQAVKVVSRYMSNSGKEHWNTVKWVVRYLREMSDHAI 181
           +KV Y+S + SLMY MVCT PD+  AV VVSRYMSN GK+HW  VKW++RYL   S+ ++
Sbjct: 2   AKVPYSSAIGSLMYAMVCTRPDVAHAVGVVSRYMSNPGKQHWKAVKWILRYLSGTSNMSL 61

Query: 182 VYGRTDLRLKGYVDADFAGDADSRRSITDCV 274
            + ++D+ L+ YVDAD AGD D R+S T  V
Sbjct: 62  YFKKSDMGLQSYVDADMAGDIDGRKSTTGYV 92



 Score = 51.2 bits (121), Expect(2) = 9e-31
 Identities = 25/48 (52%), Positives = 35/48 (72%)
 Frame = +3

Query: 270 VFTFRSGVVSWMLKL*SIMSLSTKEAEYMVTSEVSKELL*LKTFFGEL 413
           VFTF S  ++W+ KL  I++LST EAEY+  +E SKEL+ L++F  EL
Sbjct: 92  VFTFGSTTITWVSKLQKIVALSTTEAEYVAVTEASKELIWLQSFLEEL 139


>emb|CAN65504.1| hypothetical protein VITISV_028342 [Vitis vinifera]
          Length = 1252

 Score =  113 bits (282), Expect(2) = 3e-30
 Identities = 53/91 (58%), Positives = 65/91 (71%)
 Frame = +2

Query: 2    SKVAYASVVDSLMYIMVCTWPDIVQAVKVVSRYMSNSGKEHWNTVKWVVRYLREMSDHAI 181
            SKV YAS + SLMY MVCT PDI  AV +VSR+MS  GK+HW  VKW++RYL+   D  +
Sbjct: 849  SKVPYASAIGSLMYAMVCTRPDIAHAVGIVSRFMSRPGKQHWEAVKWILRYLKGSLDTCL 908

Query: 182  VYGRTDLRLKGYVDADFAGDADSRRSITDCV 274
             +    L+L+GYVDADFAGD DSR+S T  V
Sbjct: 909  CFTGASLKLQGYVDADFAGDIDSRKSTTGFV 939



 Score = 46.2 bits (108), Expect(2) = 3e-30
 Identities = 27/62 (43%), Positives = 36/62 (58%)
 Frame = +3

Query: 270  VFTFRSGVVSWMLKL*SIMSLSTKEAEYMVTSEVSKELL*LKTFFGELR*SFVSYPCNTL 449
            VFT     +SW   L  I++LST EAEY+V +E  KE++ L  F  EL  SF + P   +
Sbjct: 939  VFTLGGTAISWTSNLQKIVTLSTTEAEYVVATEAGKEMIWLHGFLDELA-SFHTTPHREI 997

Query: 450  IQ 455
            IQ
Sbjct: 998  IQ 999


>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
            1-94; Includes: RecName: Full=Protease; Includes:
            RecName: Full=Reverse transcriptase; Includes: RecName:
            Full=Endonuclease
 emb|CAA32025.1| unnamed protein product [Nicotiana tabacum]
          Length = 1328

 Score =  109 bits (272), Expect(2) = 6e-30
 Identities = 51/88 (57%), Positives = 63/88 (71%)
 Frame = +2

Query: 2    SKVAYASVVDSLMYIMVCTWPDIVQAVKVVSRYMSNSGKEHWNTVKWVVRYLREMSDHAI 181
            +KV Y+S V SLMY MVCT PDI  AV VVSR++ N GKEHW  VKW++RYLR  +   +
Sbjct: 1107 AKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCL 1166

Query: 182  VYGRTDLRLKGYVDADFAGDADSRRSIT 265
             +G +D  LKGY DAD AGD D+R+S T
Sbjct: 1167 CFGGSDPILKGYTDADMAGDIDNRKSST 1194



 Score = 49.3 bits (116), Expect(2) = 6e-30
 Identities = 23/48 (47%), Positives = 31/48 (64%)
 Frame = +3

Query: 270  VFTFRSGVVSWMLKL*SIMSLSTKEAEYMVTSEVSKELL*LKTFFGEL 413
            +FTF  G +SW  KL   ++LST EAEY+  +E  KE++ LK F  EL
Sbjct: 1197 LFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQEL 1244


>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
 gb|AAU89150.1| integrase core domain containing protein [Oryza sativa Japonica
            Group]
 gb|ABF98081.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1322

 Score =  115 bits (289), Expect(2) = 1e-29
 Identities = 52/91 (57%), Positives = 66/91 (72%)
 Frame = +2

Query: 2    SKVAYASVVDSLMYIMVCTWPDIVQAVKVVSRYMSNSGKEHWNTVKWVVRYLREMSDHAI 181
            S+V Y+S V SLMY MVC+WPD+  A+ +VSRYM+N GKEHW  V+W+ RYLR  +D  +
Sbjct: 1102 SRVPYSSAVGSLMYAMVCSWPDLSHAMSLVSRYMANPGKEHWKAVQWIFRYLRGTADACL 1161

Query: 182  VYGRTDLRLKGYVDADFAGDADSRRSITDCV 274
             +GR D  L GYVD+DFA D D RRS+T  V
Sbjct: 1162 KFGRIDKGLVGYVDSDFAADLDKRRSLTGYV 1192



 Score = 42.0 bits (97), Expect(2) = 1e-29
 Identities = 23/48 (47%), Positives = 28/48 (58%)
 Frame = +3

Query: 270  VFTFRSGVVSWMLKL*SIMSLSTKEAEYMVTSEVSKELL*LKTFFGEL 413
            VFT  S  VSW   L  +++ ST EAEYM  +E  KE + LK  F EL
Sbjct: 1192 VFTIGSCAVSWKATLQPVVAQSTTEAEYMAIAEACKESVWLKGLFAEL 1239


>gb|POF25367.1| retrovirus-related pol polyprotein from transposon tnt 1-94
           [Quercus suber]
          Length = 152

 Score =  114 bits (284), Expect(2) = 1e-29
 Identities = 55/91 (60%), Positives = 65/91 (71%)
 Frame = +2

Query: 2   SKVAYASVVDSLMYIMVCTWPDIVQAVKVVSRYMSNSGKEHWNTVKWVVRYLREMSDHAI 181
           SKV YAS + SLMY MVCT P+I  AV VVSR+MS  GK HW  VKW++RYL+  SD  I
Sbjct: 2   SKVPYASAIGSLMYAMVCTRPNIAHAVGVVSRFMSRPGKRHWEAVKWILRYLKGSSDTCI 61

Query: 182 VYGRTDLRLKGYVDADFAGDADSRRSITDCV 274
            +    L+L+GYVDADFAGD DSR+S T  V
Sbjct: 62  CFTGASLKLQGYVDADFAGDIDSRKSTTGFV 92



 Score = 43.5 bits (101), Expect(2) = 1e-29
 Identities = 22/48 (45%), Positives = 28/48 (58%)
 Frame = +3

Query: 270 VFTFRSGVVSWMLKL*SIMSLSTKEAEYMVTSEVSKELL*LKTFFGEL 413
           VFT    V+SW   L  I +LST EAEY+  +E  KE++ L  F  EL
Sbjct: 92  VFTLGGTVISWASNLQKIFTLSTTEAEYVTATEAGKEMIWLHRFLDEL 139


>emb|CAN67337.1| hypothetical protein VITISV_004415 [Vitis vinifera]
          Length = 281

 Score =  113 bits (283), Expect(2) = 2e-29
 Identities = 54/91 (59%), Positives = 65/91 (71%)
 Frame = +2

Query: 2   SKVAYASVVDSLMYIMVCTWPDIVQAVKVVSRYMSNSGKEHWNTVKWVVRYLREMSDHAI 181
           SKV YAS + SLMY MVCT PDI  AV VVSR+MS  GK+HW  VKW++RYL+   D  +
Sbjct: 61  SKVPYASAIGSLMYAMVCTRPDIAHAVGVVSRFMSRPGKQHWEAVKWILRYLKGSLDTCL 120

Query: 182 VYGRTDLRLKGYVDADFAGDADSRRSITDCV 274
            +    L+L+GYVDADFAGD DSR+S T  V
Sbjct: 121 CFTGASLKLQGYVDADFAGDIDSRKSTTGFV 151



 Score = 43.5 bits (101), Expect(2) = 2e-29
 Identities = 22/48 (45%), Positives = 29/48 (60%)
 Frame = +3

Query: 270 VFTFRSGVVSWMLKL*SIMSLSTKEAEYMVTSEVSKELL*LKTFFGEL 413
           VFT    V+SW   L  I++LST EAEY+  +E  KE++ L  F  EL
Sbjct: 151 VFTLGGTVISWTSNLQKIVTLSTTEAEYVAATEAGKEMIWLHGFLDEL 198


>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  111 bits (277), Expect(2) = 2e-29
 Identities = 52/91 (57%), Positives = 69/91 (75%)
 Frame = +2

Query: 2    SKVAYASVVDSLMYIMVCTWPDIVQAVKVVSRYMSNSGKEHWNTVKWVVRYLREMSDHAI 181
            S+V YAS V SLMY M+CT PDI QAV VVSR+M++ GKEHWN VK ++RY++  S  A+
Sbjct: 1084 SRVPYASAVGSLMYAMICTRPDIAQAVGVVSRFMADPGKEHWNAVKRIMRYIKGTSGVAV 1143

Query: 182  VYGRTDLRLKGYVDADFAGDADSRRSITDCV 274
             +G ++L ++GYVD+DFAGD D R+S T  V
Sbjct: 1144 CFGGSELTVRGYVDSDFAGDHDKRKSTTGYV 1174



 Score = 45.4 bits (106), Expect(2) = 2e-29
 Identities = 21/48 (43%), Positives = 31/48 (64%)
 Frame = +3

Query: 270  VFTFRSGVVSWMLKL*SIMSLSTKEAEYMVTSEVSKELL*LKTFFGEL 413
            VFT   G VSW+ KL ++++LST EAEYM  ++  KE + ++    EL
Sbjct: 1174 VFTLAGGAVSWLSKLQTVVALSTTEAEYMAATQACKEAIWMQRLMEEL 1221


>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  111 bits (277), Expect(2) = 2e-29
 Identities = 52/91 (57%), Positives = 69/91 (75%)
 Frame = +2

Query: 2    SKVAYASVVDSLMYIMVCTWPDIVQAVKVVSRYMSNSGKEHWNTVKWVVRYLREMSDHAI 181
            S+V YAS V SLMY M+CT PDI QAV VVSR+M++ GKEHWN VK ++RY++  S  A+
Sbjct: 1084 SRVPYASAVGSLMYAMICTRPDIAQAVGVVSRFMADPGKEHWNAVKRIMRYIKGTSGVAV 1143

Query: 182  VYGRTDLRLKGYVDADFAGDADSRRSITDCV 274
             +G ++L ++GYVD+DFAGD D R+S T  V
Sbjct: 1144 CFGGSELTVRGYVDSDFAGDHDKRKSTTGYV 1174



 Score = 45.4 bits (106), Expect(2) = 2e-29
 Identities = 21/48 (43%), Positives = 31/48 (64%)
 Frame = +3

Query: 270  VFTFRSGVVSWMLKL*SIMSLSTKEAEYMVTSEVSKELL*LKTFFGEL 413
            VFT   G VSW+ KL ++++LST EAEYM  ++  KE + ++    EL
Sbjct: 1174 VFTLTGGAVSWLSKLQTVVALSTTEAEYMAATQACKEAIWMQRLMEEL 1221


>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  111 bits (277), Expect(2) = 2e-29
 Identities = 52/91 (57%), Positives = 69/91 (75%)
 Frame = +2

Query: 2    SKVAYASVVDSLMYIMVCTWPDIVQAVKVVSRYMSNSGKEHWNTVKWVVRYLREMSDHAI 181
            S+V YAS V SLMY M+CT PDI QAV VVSR+M++ GKEHWN VK ++RY++  S  A+
Sbjct: 1084 SRVPYASAVGSLMYAMICTRPDIAQAVGVVSRFMADPGKEHWNAVKRIMRYIKGTSGVAV 1143

Query: 182  VYGRTDLRLKGYVDADFAGDADSRRSITDCV 274
             +G ++L ++GYVD+DFAGD D R+S T  V
Sbjct: 1144 CFGGSELTVRGYVDSDFAGDHDKRKSTTGYV 1174



 Score = 45.4 bits (106), Expect(2) = 2e-29
 Identities = 21/48 (43%), Positives = 31/48 (64%)
 Frame = +3

Query: 270  VFTFRSGVVSWMLKL*SIMSLSTKEAEYMVTSEVSKELL*LKTFFGEL 413
            VFT   G VSW+ KL ++++LST EAEYM  ++  KE + ++    EL
Sbjct: 1174 VFTLAGGAVSWLSKLQTVVALSTTEAEYMAATQACKEAIWMQRLMEEL 1221


>gb|KYP59064.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1300

 Score =  107 bits (268), Expect(2) = 3e-29
 Identities = 53/88 (60%), Positives = 62/88 (70%), Gaps = 1/88 (1%)
 Frame = +2

Query: 14   YASVVDSLMYIMVCTWPDIVQAVKVVSRYMSNSGKEHWNTVKWVVRYLREMSDHAIVYGR 193
            YAS + SLMY MVCT PDI  AV VVSR+MSN G  HW  VKW++RYLR   D  +++GR
Sbjct: 1083 YASAIGSLMYAMVCTRPDIAHAVGVVSRFMSNPGVMHWEAVKWILRYLRGTKDRVLMFGR 1142

Query: 194  TDLRLKGYVDADFAG-DADSRRSITDCV 274
             +L L G+VDADFAG D D RRS T  V
Sbjct: 1143 GNLTLSGFVDADFAGSDLDKRRSTTGYV 1170



 Score = 48.5 bits (114), Expect(2) = 3e-29
 Identities = 23/48 (47%), Positives = 33/48 (68%)
 Frame = +3

Query: 270  VFTFRSGVVSWMLKL*SIMSLSTKEAEYMVTSEVSKELL*LKTFFGEL 413
            VFT+    +SW+ KL  I++LST EAEY+  +E +KEL+ L+ F  EL
Sbjct: 1170 VFTYGGTAISWISKLQKIVALSTTEAEYVAVTEAAKELVWLQNFLNEL 1217


>dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]
          Length = 1298

 Score =  111 bits (277), Expect(2) = 3e-29
 Identities = 52/91 (57%), Positives = 67/91 (73%)
 Frame = +2

Query: 2    SKVAYASVVDSLMYIMVCTWPDIVQAVKVVSRYMSNSGKEHWNTVKWVVRYLREMSDHAI 181
            S+V YAS V SLM+ M+CT PDI QAV VVSRYM+N G+EHWN VK ++RY++  SD A+
Sbjct: 1077 SRVPYASAVGSLMFAMICTRPDIAQAVGVVSRYMANPGREHWNCVKRILRYIKGTSDVAL 1136

Query: 182  VYGRTDLRLKGYVDADFAGDADSRRSITDCV 274
             YG +D  + GYVD+D+AGD D  +S T  V
Sbjct: 1137 CYGGSDFIINGYVDSDYAGDLDKSKSTTGYV 1167



 Score = 45.1 bits (105), Expect(2) = 3e-29
 Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
 Frame = +3

Query: 270  VFTFRSGVVSWMLKL*SIMSLSTKEAEYMVTSEVSKELL*LKTFFGEL--R*SFVSYPCN 443
            VF    G VSW+ KL ++++ ST EAEY+  ++ SKE + LK    EL  +  FVS  C+
Sbjct: 1167 VFKVAGGAVSWVSKLQAVVATSTTEAEYVAATQASKEAIWLKMLLEELGHKQEFVSLFCD 1226

Query: 444  T 446
            +
Sbjct: 1227 S 1227


>emb|CAN69974.1| hypothetical protein VITISV_014388 [Vitis vinifera]
          Length = 1058

 Score =  113 bits (282), Expect(2) = 3e-29
 Identities = 54/91 (59%), Positives = 65/91 (71%)
 Frame = +2

Query: 2    SKVAYASVVDSLMYIMVCTWPDIVQAVKVVSRYMSNSGKEHWNTVKWVVRYLREMSDHAI 181
            SKV YAS + SLMY MVCT PDI  AV VVSR+MS  GK+HW  VKW++RYL+   D  +
Sbjct: 866  SKVPYASAIXSLMYAMVCTRPDIAHAVGVVSRFMSRLGKQHWEAVKWILRYLKGSLDTCL 925

Query: 182  VYGRTDLRLKGYVDADFAGDADSRRSITDCV 274
             +    L+L+GYVDADFAGD DSR+S T  V
Sbjct: 926  CFTGASLKLQGYVDADFAGDIDSRKSTTGFV 956



 Score = 43.1 bits (100), Expect(2) = 3e-29
 Identities = 22/48 (45%), Positives = 30/48 (62%)
 Frame = +3

Query: 270  VFTFRSGVVSWMLKL*SIMSLSTKEAEYMVTSEVSKELL*LKTFFGEL 413
            VFT     +SW   L  I++LST EAEY+ T++V KE++ L  F  EL
Sbjct: 956  VFTLGGTAISWTSNLQKIVTLSTIEAEYVATTKVGKEMIWLHGFLDEL 1003


>gb|KOM47916.1| hypothetical protein LR48_Vigan07g162000 [Vigna angularis]
          Length = 222

 Score =  111 bits (278), Expect(2) = 4e-29
 Identities = 50/88 (56%), Positives = 66/88 (75%)
 Frame = +2

Query: 2   SKVAYASVVDSLMYIMVCTWPDIVQAVKVVSRYMSNSGKEHWNTVKWVVRYLREMSDHAI 181
           +K+ YAS + SLMY MVCT PDI  AV VVSR+MSN GK HW  VKW++RYLR+  +  +
Sbjct: 2   AKIPYASAIGSLMYAMVCTRPDIGYAVGVVSRFMSNPGKAHWEAVKWILRYLRKTKEKCL 61

Query: 182 VYGRTDLRLKGYVDADFAGDADSRRSIT 265
            + + +L+++GYVDADFAG+ D RRS T
Sbjct: 62  CFSKGELKVQGYVDADFAGEIDYRRSTT 89



 Score = 44.3 bits (103), Expect(2) = 4e-29
 Identities = 22/48 (45%), Positives = 32/48 (66%)
 Frame = +3

Query: 270 VFTFRSGVVSWMLKL*SIMSLSTKEAEYMVTSEVSKELL*LKTFFGEL 413
           +FT  +  VSWM ++  I++LST EAEY+  +E SKEL+ L+    EL
Sbjct: 92  IFTVGTTAVSWMSQIQKIVALSTTEAEYVAVTEASKELIWLQGLLTEL 139


>emb|CAN71224.1| hypothetical protein VITISV_006366 [Vitis vinifera]
          Length = 1951

 Score =  113 bits (283), Expect(2) = 5e-29
 Identities = 54/91 (59%), Positives = 65/91 (71%)
 Frame = +2

Query: 2   SKVAYASVVDSLMYIMVCTWPDIVQAVKVVSRYMSNSGKEHWNTVKWVVRYLREMSDHAI 181
           SKV YAS + SLMY MVCT PDI  AV VVSR+MS  GK+HW  VKW++RYL+   D  +
Sbjct: 96  SKVPYASAIGSLMYAMVCTKPDIAHAVGVVSRFMSRPGKQHWEAVKWILRYLKGSLDTCL 155

Query: 182 VYGRTDLRLKGYVDADFAGDADSRRSITDCV 274
            +    L+L+GYVDADFAGD DSR+S T  V
Sbjct: 156 CFTGASLKLQGYVDADFAGDIDSRKSTTGFV 186



 Score = 42.0 bits (97), Expect(2) = 5e-29
 Identities = 21/48 (43%), Positives = 28/48 (58%)
 Frame = +3

Query: 270 VFTFRSGVVSWMLKL*SIMSLSTKEAEYMVTSEVSKELL*LKTFFGEL 413
           VFT     +SW   L  I++LST EAEY+  +E  KE++ L  F  EL
Sbjct: 186 VFTLGGTAISWTSNLQKIVTLSTTEAEYVAATEAGKEMIWLHGFLDEL 233


>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
 gb|ABA92739.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1373

 Score =  108 bits (270), Expect(2) = 5e-29
 Identities = 51/91 (56%), Positives = 65/91 (71%)
 Frame = +2

Query: 2    SKVAYASVVDSLMYIMVCTWPDIVQAVKVVSRYMSNSGKEHWNTVKWVVRYLREMSDHAI 181
            S+V Y+S V SLMY MVC+ PD+  A+ +VSRYMSN GKEHW  V+W+ RYLR  +   +
Sbjct: 1113 SRVPYSSAVGSLMYAMVCSRPDLSYAMSLVSRYMSNPGKEHWRAVQWIFRYLRGTTYSCL 1172

Query: 182  VYGRTDLRLKGYVDADFAGDADSRRSITDCV 274
             +GRTD  L GYVD+D+A D D RRS+T  V
Sbjct: 1173 KFGRTDKGLIGYVDSDYAADLDRRRSLTGYV 1203



 Score = 47.0 bits (110), Expect(2) = 5e-29
 Identities = 25/48 (52%), Positives = 30/48 (62%)
 Frame = +3

Query: 270  VFTFRSGVVSWMLKL*SIMSLSTKEAEYMVTSEVSKELL*LKTFFGEL 413
            VFT  S  VSW   L S+++LST EAEYM   E  KEL+ LK  + EL
Sbjct: 1203 VFTIGSCAVSWRATLQSVVALSTTEAEYMAICEACKELIWLKGLYAEL 1250


>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1333

 Score =  108 bits (270), Expect(2) = 5e-29
 Identities = 51/91 (56%), Positives = 65/91 (71%)
 Frame = +2

Query: 2    SKVAYASVVDSLMYIMVCTWPDIVQAVKVVSRYMSNSGKEHWNTVKWVVRYLREMSDHAI 181
            S+V Y+S V SLMY MVC+ PD+  A+ +VSRYMSN GKEHW  V+W+ RYLR  +   +
Sbjct: 1113 SRVPYSSAVGSLMYAMVCSRPDLSYAMSLVSRYMSNPGKEHWRVVQWIFRYLRGTTYSCL 1172

Query: 182  VYGRTDLRLKGYVDADFAGDADSRRSITDCV 274
             +GRTD  L GYVD+D+A D D RRS+T  V
Sbjct: 1173 KFGRTDKGLIGYVDSDYAADLDRRRSLTGYV 1203



 Score = 47.0 bits (110), Expect(2) = 5e-29
 Identities = 25/48 (52%), Positives = 30/48 (62%)
 Frame = +3

Query: 270  VFTFRSGVVSWMLKL*SIMSLSTKEAEYMVTSEVSKELL*LKTFFGEL 413
            VFT  S  VSW   L S+++LST EAEYM   E  KEL+ LK  + EL
Sbjct: 1203 VFTIGSCAVSWRATLQSVVALSTTEAEYMAICEACKELIWLKGLYAEL 1250


>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1333

 Score =  108 bits (270), Expect(2) = 5e-29
 Identities = 51/91 (56%), Positives = 65/91 (71%)
 Frame = +2

Query: 2    SKVAYASVVDSLMYIMVCTWPDIVQAVKVVSRYMSNSGKEHWNTVKWVVRYLREMSDHAI 181
            S+V Y+S V SLMY MVC+ PD+  A+ +VSRYMSN GKEHW  V+W+ RYLR  +   +
Sbjct: 1113 SRVPYSSAVGSLMYAMVCSRPDLSYAMSLVSRYMSNPGKEHWRAVQWIFRYLRGTTYSCL 1172

Query: 182  VYGRTDLRLKGYVDADFAGDADSRRSITDCV 274
             +GRTD  L GYVD+D+A D D RRS+T  V
Sbjct: 1173 KFGRTDKGLIGYVDSDYAADLDRRRSLTGYV 1203



 Score = 47.0 bits (110), Expect(2) = 5e-29
 Identities = 25/48 (52%), Positives = 30/48 (62%)
 Frame = +3

Query: 270  VFTFRSGVVSWMLKL*SIMSLSTKEAEYMVTSEVSKELL*LKTFFGEL 413
            VFT  S  VSW   L S+++LST EAEYM   E  KEL+ LK  + EL
Sbjct: 1203 VFTIGSCAVSWRATLQSVVALSTTEAEYMAICEACKELIWLKGLYAEL 1250


>emb|CAN71029.1| hypothetical protein VITISV_001707 [Vitis vinifera]
          Length = 1286

 Score =  113 bits (283), Expect(2) = 5e-29
 Identities = 54/91 (59%), Positives = 65/91 (71%)
 Frame = +2

Query: 2    SKVAYASVVDSLMYIMVCTWPDIVQAVKVVSRYMSNSGKEHWNTVKWVVRYLREMSDHAI 181
            SKV YAS + SLMY MVCT PDI  AV VVSR+MS  GK+HW  VKW++RYL+   D  +
Sbjct: 1066 SKVPYASAIGSLMYAMVCTRPDIAHAVGVVSRFMSRPGKQHWEVVKWILRYLKGSLDTCL 1125

Query: 182  VYGRTDLRLKGYVDADFAGDADSRRSITDCV 274
             +    L+L+GYVDADFAGD DSR+S T  V
Sbjct: 1126 CFTGASLKLQGYVDADFAGDIDSRKSTTGFV 1156



 Score = 42.0 bits (97), Expect(2) = 5e-29
 Identities = 21/48 (43%), Positives = 28/48 (58%)
 Frame = +3

Query: 270  VFTFRSGVVSWMLKL*SIMSLSTKEAEYMVTSEVSKELL*LKTFFGEL 413
            VFT     +SW   L  I++LST EAEY+  +E  KE++ L  F  EL
Sbjct: 1156 VFTLGGTAISWASNLQKIVTLSTTEAEYVAATEAGKEMIWLHGFLDEL 1203


>emb|CAN74341.1| hypothetical protein VITISV_043997 [Vitis vinifera]
          Length = 1269

 Score =  113 bits (283), Expect(2) = 5e-29
 Identities = 54/91 (59%), Positives = 65/91 (71%)
 Frame = +2

Query: 2    SKVAYASVVDSLMYIMVCTWPDIVQAVKVVSRYMSNSGKEHWNTVKWVVRYLREMSDHAI 181
            SKV YAS + SLMY MVCT PDI  AV VVSR+MS  GK+HW  VKW++RYL+   D  +
Sbjct: 1049 SKVPYASAIGSLMYAMVCTRPDIAHAVGVVSRFMSRPGKQHWEAVKWILRYLKGSLDTCL 1108

Query: 182  VYGRTDLRLKGYVDADFAGDADSRRSITDCV 274
             +    L+L+GYVDADFAGD DSR+S T  V
Sbjct: 1109 CFTGASLKLQGYVDADFAGDIDSRKSTTGFV 1139



 Score = 42.0 bits (97), Expect(2) = 5e-29
 Identities = 21/48 (43%), Positives = 28/48 (58%)
 Frame = +3

Query: 270  VFTFRSGVVSWMLKL*SIMSLSTKEAEYMVTSEVSKELL*LKTFFGEL 413
            VFT     +SW   L  I++LST EAEY+  +E  KE++ L  F  EL
Sbjct: 1139 VFTLGGTAISWTSNLQKIVTLSTTEAEYVAATEAGKEMIWLHGFLDEL 1186