BLASTX nr result

ID: Ophiopogon24_contig00038908 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00038908
         (421 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKY39455.1| hypothetical protein RhiirA4_393483 [Rhizophagus ...    59   1e-08
gb|PKC69734.1| hypothetical protein RhiirA1_415271 [Rhizophagus ...    57   4e-08
gb|EXX58836.1| hypothetical protein RirG_194250 [Rhizophagus irr...    57   6e-08

>gb|PKY39455.1| hypothetical protein RhiirA4_393483 [Rhizophagus irregularis]
          Length = 90

 Score = 58.5 bits (140), Expect = 1e-08
 Identities = 34/89 (38%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
 Frame = -2

Query: 339 MLSSRVFTIATILIALFCVIASVSAAPLDS-----RAILRRDDDQEDLQSDSIAVSSNGD 175
           M++++V  + T+ +AL  VI SV+AAP+D        + R++ +Q +LQSDSI VSS+GD
Sbjct: 1   MVNTKVVILVTLFVALLGVILSVTAAPVDRVNRRVSFVKRKETNQTELQSDSIPVSSDGD 60

Query: 174 GXXXXXXXXXXXXXXXXXEGNSAQGDDKG 88
           G                  GNSA+GD+ G
Sbjct: 61  GKLDAYDPDDEIPKNVTDNGNSAKGDNGG 89


>gb|PKC69734.1| hypothetical protein RhiirA1_415271 [Rhizophagus irregularis]
          Length = 90

 Score = 57.4 bits (137), Expect = 4e-08
 Identities = 34/87 (39%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
 Frame = -2

Query: 339 MLSSRVFTIATILIALFCVIASVSAAPLDS-----RAILRRDDDQEDLQSDSIAVSSNGD 175
           M++++V  + T+ +AL  VI SV+AAP+D        + R + +Q  LQSDSI VSS+GD
Sbjct: 1   MVNTKVVILVTLFVALLGVILSVTAAPVDRVNRRVSFVKREEKNQTTLQSDSIPVSSDGD 60

Query: 174 GXXXXXXXXXXXXXXXXXEGNSAQGDD 94
           G                  GNSA+GDD
Sbjct: 61  GEIEAYDPDDKVPKNVTDNGNSAEGDD 87


>gb|EXX58836.1| hypothetical protein RirG_194250 [Rhizophagus irregularis DAOM
           197198w]
 dbj|GBC14168.1| hypothetical protein RIR_0275700 [Rhizophagus irregularis DAOM
           181602]
 gb|PKC15338.1| hypothetical protein RhiirA5_349200 [Rhizophagus irregularis]
 gb|PKK74156.1| hypothetical protein RhiirC2_739397 [Rhizophagus irregularis]
 gb|PKY17488.1| hypothetical protein RhiirB3_404375 [Rhizophagus irregularis]
 gb|POG68020.1| hypothetical protein GLOIN_2v1641246 [Rhizophagus irregularis DAOM
           181602=DAOM 197198]
          Length = 90

 Score = 57.0 bits (136), Expect = 6e-08
 Identities = 34/89 (38%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
 Frame = -2

Query: 339 MLSSRVFTIATILIALFCVIASVSAAPLDS-----RAILRRDDDQEDLQSDSIAVSSNGD 175
           M++++V  + T+ +AL  VI SV+AAP+D        + R + +Q  LQSDSI VSS+GD
Sbjct: 1   MVNTKVVILVTLFVALLGVILSVTAAPVDRVNRRVSFVKREEKNQTTLQSDSIPVSSDGD 60

Query: 174 GXXXXXXXXXXXXXXXXXEGNSAQGDDKG 88
           G                  GNSA+GD+ G
Sbjct: 61  GTLEAYNPDDKVPKNVTDNGNSAEGDNGG 89


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