BLASTX nr result

ID: Ophiopogon24_contig00038888 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00038888
         (595 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020703750.1| formin-like protein 1 [Dendrobium catenatum]...    59   1e-06

>ref|XP_020703750.1| formin-like protein 1 [Dendrobium catenatum]
 gb|PKU80326.1| Formin-like protein 1 [Dendrobium catenatum]
          Length = 847

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 40/97 (41%), Positives = 48/97 (49%)
 Frame = +3

Query: 303 NISSLITPSRNAPRSSKXXXXXXXXXXXXXXXXXXXXXXXVRRKRSSDKGNTLDPGSDIH 482
           NISSLITPS ++P +                          RR+  SD+    D GSD  
Sbjct: 88  NISSLITPSSHSPTTKLLQAIAFPILSLALLSLLLLLFLFFRRRSRSDRA---DDGSDSD 144

Query: 483 HLVPPDSTSSTDALRKHSATPAPPSSEFLYLGTLVSS 593
            L PP+S +S    RK SA   P SSEFLYLGTLV+S
Sbjct: 145 RLFPPNSAASDS--RKPSANSGPVSSEFLYLGTLVNS 179


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