BLASTX nr result

ID: Ophiopogon24_contig00038745 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00038745
         (996 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010915381.1| PREDICTED: uncharacterized protein LOC105040...    72   4e-10
ref|XP_019704566.1| PREDICTED: uncharacterized protein LOC105040...    72   4e-10
ref|XP_020244837.1| uncharacterized protein LOC109822964 isoform...    62   6e-07
gb|PNX67372.1| cellular nucleic acid-binding protein, partial [T...    55   4e-06
emb|CCA29197.1| gag-pol polyprotein, partial [Small ruminant len...    57   6e-06

>ref|XP_010915381.1| PREDICTED: uncharacterized protein LOC105040518 isoform X2 [Elaeis
           guineensis]
          Length = 639

 Score = 72.0 bits (175), Expect = 4e-10
 Identities = 37/131 (28%), Positives = 61/131 (46%)
 Frame = +3

Query: 603 SSEEFASGLHRLWSGNWIWKPRRLNSSQFLLEFPSKDHLRSACXXXXXXXXXXXXTISRW 782
           S ++    L  +W  NW W  RRL+ + FL+EFPS++  +                + RW
Sbjct: 289 SEKDVVDALSSVWPWNWSWPIRRLDENAFLVEFPSEEAFQKLTELQPIRYNNFFLQLQRW 348

Query: 783 SLEFGAARVERKRKFWLQLSNLPLLVWSEASISLVISNFASLIRLSSSTQSPTNFSYAIL 962
           S   GA  + +    W+++++ PL  W  AS   ++++F SL  L   T+   +   A L
Sbjct: 349 SKRVGA--MGKPLDVWIRVASFPLHCWDRASFQSLVASFGSLEELDKKTEEKLDLCEARL 406

Query: 963 LAHCHSRASIP 995
              C  R+ IP
Sbjct: 407 RISCLDRSKIP 417


>ref|XP_019704566.1| PREDICTED: uncharacterized protein LOC105040518 isoform X1 [Elaeis
           guineensis]
          Length = 710

 Score = 72.0 bits (175), Expect = 4e-10
 Identities = 37/131 (28%), Positives = 61/131 (46%)
 Frame = +3

Query: 603 SSEEFASGLHRLWSGNWIWKPRRLNSSQFLLEFPSKDHLRSACXXXXXXXXXXXXTISRW 782
           S ++    L  +W  NW W  RRL+ + FL+EFPS++  +                + RW
Sbjct: 360 SEKDVVDALSSVWPWNWSWPIRRLDENAFLVEFPSEEAFQKLTELQPIRYNNFFLQLQRW 419

Query: 783 SLEFGAARVERKRKFWLQLSNLPLLVWSEASISLVISNFASLIRLSSSTQSPTNFSYAIL 962
           S   GA  + +    W+++++ PL  W  AS   ++++F SL  L   T+   +   A L
Sbjct: 420 SKRVGA--MGKPLDVWIRVASFPLHCWDRASFQSLVASFGSLEELDKKTEEKLDLCEARL 477

Query: 963 LAHCHSRASIP 995
              C  R+ IP
Sbjct: 478 RISCLDRSKIP 488


>ref|XP_020244837.1| uncharacterized protein LOC109822964 isoform X1 [Asparagus
           officinalis]
          Length = 504

 Score = 62.0 bits (149), Expect = 6e-07
 Identities = 45/167 (26%), Positives = 66/167 (39%), Gaps = 4/167 (2%)
 Frame = +3

Query: 507 PFASTIDFSAE--ILSKYRHLRKMAVVTLVNGSPSSE--EFASGLHRLWSGNWIWKPRRL 674
           P    ID S    I S  + L    ++T+  GSPS E  +   G    W   W  K   L
Sbjct: 61  PVEKKIDLSDSETIFSNSKVLASFGILTITEGSPSLELIKLRLGWFFNWQ-RWSGKVFPL 119

Query: 675 NSSQFLLEFPSKDHLRSACXXXXXXXXXXXXTISRWSLEFGAARVERKRKFWLQLSNLPL 854
            ++ FL+EFPS   L  A              I+ W+  FG   ++     W++  NLPL
Sbjct: 120 QANSFLIEFPSVFQLSEAVDIKTINFEIFKGCIAPWNENFGMKTIDSSFYQWIKFKNLPL 179

Query: 855 LVWSEASISLVISNFASLIRLSSSTQSPTNFSYAILLAHCHSRASIP 995
             WS   I+ ++  F  +I+   +     N     +L    S   IP
Sbjct: 180 QFWSTDIIAKIVGTFGEMIKCCKNISEKLNGQDVRILVKIKSADCIP 226


>gb|PNX67372.1| cellular nucleic acid-binding protein, partial [Trifolium pratense]
          Length = 79

 Score = 54.7 bits (130), Expect = 4e-06
 Identities = 19/35 (54%), Positives = 26/35 (74%)
 Frame = +3

Query: 96  RCFKCGDRGHMAKFCRNGVLCFNCRKVGHYAYTCR 200
           RC+KCGD GH A  C+ GV+CFNC++ GH +  C+
Sbjct: 36  RCYKCGDPGHKADQCKKGVICFNCKEPGHKSNVCK 70


>emb|CCA29197.1| gag-pol polyprotein, partial [Small ruminant lentivirus]
          Length = 217

 Score = 57.4 bits (137), Expect = 6e-06
 Identities = 21/43 (48%), Positives = 30/43 (69%)
 Frame = +3

Query: 78  LTKIKFRCFKCGDRGHMAKFCRNGVLCFNCRKVGHYAYTCRHQ 206
           LT+ + +C+ CG  GHMA+ CRNG++C NC K GH    CR++
Sbjct: 173 LTRERQKCYNCGKEGHMARQCRNGIICHNCGKRGHIQKNCRNK 215


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