BLASTX nr result
ID: Ophiopogon24_contig00038644
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00038644
(417 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ONK78802.1| uncharacterized protein A4U43_C02F22580 [Asparagu... 62 4e-17
ref|XP_020255008.1| protein CHUP1, chloroplastic [Asparagus offi... 62 4e-17
ref|XP_010914782.1| PREDICTED: protein CHUP1, chloroplastic [Ela... 49 3e-10
ref|XP_008805063.1| PREDICTED: protein CHUP1, chloroplastic [Pho... 42 1e-08
ref|XP_010941469.1| PREDICTED: LOW QUALITY PROTEIN: protein CHUP... 50 5e-06
>gb|ONK78802.1| uncharacterized protein A4U43_C02F22580 [Asparagus officinalis]
Length = 921
Score = 61.6 bits (148), Expect(3) = 4e-17
Identities = 39/72 (54%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Frame = -3
Query: 415 EGNNISRVRRPI-LATKPKGREVGDPMIVDQLQTCTVERYVRVQRHVDTNRKGSEFQSDR 239
E NN SR+RRPI LA KG VDQ +T V++Y RV+RH D N KG Q+D
Sbjct: 53 EANNSSRIRRPIDLANDQKG--------VDQPRTRAVDQYARVRRHSDMNCKGLGSQNDG 104
Query: 238 KVKDDL-RRLHV 206
K+KDDL RRLHV
Sbjct: 105 KLKDDLERRLHV 116
Score = 51.2 bits (121), Expect(3) = 4e-17
Identities = 28/48 (58%), Positives = 35/48 (72%)
Frame = -2
Query: 161 RIQVEKLQSRNVHLELQNKELGKDLFSAEEKIRTLEKRDQ*KEKLPKE 18
+ Q+EKL SRNV LE QNK+LG+DL AE KI LEK+D+ E + KE
Sbjct: 132 KAQMEKLHSRNVLLESQNKQLGRDLSLAEAKIIALEKKDE-AESISKE 178
Score = 22.3 bits (46), Expect(3) = 4e-17
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = -1
Query: 204 ESLVKKLQSEVEALK 160
+SLV +L+SEV ALK
Sbjct: 118 DSLVNELRSEVSALK 132
>ref|XP_020255008.1| protein CHUP1, chloroplastic [Asparagus officinalis]
Length = 541
Score = 61.6 bits (148), Expect(3) = 4e-17
Identities = 39/72 (54%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Frame = -3
Query: 415 EGNNISRVRRPI-LATKPKGREVGDPMIVDQLQTCTVERYVRVQRHVDTNRKGSEFQSDR 239
E NN SR+RRPI LA KG VDQ +T V++Y RV+RH D N KG Q+D
Sbjct: 53 EANNSSRIRRPIDLANDQKG--------VDQPRTRAVDQYARVRRHSDMNCKGLGSQNDG 104
Query: 238 KVKDDL-RRLHV 206
K+KDDL RRLHV
Sbjct: 105 KLKDDLERRLHV 116
Score = 51.2 bits (121), Expect(3) = 4e-17
Identities = 28/48 (58%), Positives = 35/48 (72%)
Frame = -2
Query: 161 RIQVEKLQSRNVHLELQNKELGKDLFSAEEKIRTLEKRDQ*KEKLPKE 18
+ Q+EKL SRNV LE QNK+LG+DL AE KI LEK+D+ E + KE
Sbjct: 132 KAQMEKLHSRNVLLESQNKQLGRDLSLAEAKIIALEKKDE-AESISKE 178
Score = 22.3 bits (46), Expect(3) = 4e-17
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = -1
Query: 204 ESLVKKLQSEVEALK 160
+SLV +L+SEV ALK
Sbjct: 118 DSLVNELRSEVSALK 132
>ref|XP_010914782.1| PREDICTED: protein CHUP1, chloroplastic [Elaeis guineensis]
Length = 563
Score = 48.9 bits (115), Expect(3) = 3e-10
Identities = 23/40 (57%), Positives = 30/40 (75%)
Frame = -2
Query: 161 RIQVEKLQSRNVHLELQNKELGKDLFSAEEKIRTLEKRDQ 42
R Q+EKLQ N+ LE QNK+LG+DL AE KIR L++ +Q
Sbjct: 147 RAQIEKLQGVNLQLESQNKKLGEDLLDAEGKIRALQRSEQ 186
Score = 42.4 bits (98), Expect(3) = 3e-10
Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 10/78 (12%)
Frame = -3
Query: 415 EGNNISRVRRPILATK----------PKGREVGDPMIVDQLQTCTVERYVRVQRHVDTNR 266
E N RVRR I K PK RE D I + VE+Y R++R DT+
Sbjct: 52 EANTTQRVRRSIQLNKTKLGADEVEAPKERETEDSKITSRPGNRVVEQYARLRRQGDTHC 111
Query: 265 KGSEFQSDRKVKDDLRRL 212
+GSE ++ K K+ R+L
Sbjct: 112 RGSEDEAGGKTKELQRKL 129
Score = 20.4 bits (41), Expect(3) = 3e-10
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -1
Query: 204 ESLVKKLQSEVEALK 160
E LVK+LQSE+ L+
Sbjct: 133 ERLVKELQSEMVGLR 147
>ref|XP_008805063.1| PREDICTED: protein CHUP1, chloroplastic [Phoenix dactylifera]
Length = 565
Score = 42.4 bits (98), Expect(3) = 1e-08
Identities = 20/38 (52%), Positives = 28/38 (73%)
Frame = -2
Query: 155 QVEKLQSRNVHLELQNKELGKDLFSAEEKIRTLEKRDQ 42
Q+EKLQ N+ L+ QNK+L +DL +AE KIR L+ +Q
Sbjct: 149 QIEKLQGVNLQLKSQNKQLEEDLLAAEGKIRALQTSEQ 186
Score = 38.5 bits (88), Expect(3) = 1e-08
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Frame = -3
Query: 415 EGNNISRVRRPILATKPKG----------REVGDPMIVDQLQTCTVERYVRVQRHVDTNR 266
E + RVRR I KPK RE D + VE+Y R++R DT+
Sbjct: 52 EASTTQRVRRSIQPNKPKSGADEVGAPKERETEDSKNTSRPGNRVVEQYARLRRQGDTHC 111
Query: 265 KGSEFQSDRKVKDDLRRL 212
+GSE ++ K K+ R+L
Sbjct: 112 RGSEDEAGGKTKELQRKL 129
Score = 25.0 bits (53), Expect(3) = 1e-08
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -1
Query: 204 ESLVKKLQSEVEALKD 157
E LVK+LQSEV LKD
Sbjct: 133 ERLVKELQSEVVGLKD 148
>ref|XP_010941469.1| PREDICTED: LOW QUALITY PROTEIN: protein CHUP1, chloroplastic-like
[Elaeis guineensis]
Length = 559
Score = 50.1 bits (118), Expect(2) = 5e-06
Identities = 24/40 (60%), Positives = 31/40 (77%)
Frame = -2
Query: 161 RIQVEKLQSRNVHLELQNKELGKDLFSAEEKIRTLEKRDQ 42
R Q+EKLQ NV LE QNK+LG+DL +A+EKI LE+ +Q
Sbjct: 142 RAQLEKLQGLNVRLESQNKKLGEDLLAAQEKIGALERSEQ 181
Score = 27.7 bits (60), Expect(2) = 5e-06
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 10/75 (13%)
Frame = -3
Query: 415 EGNNISRVRRPILATK----------PKGREVGDPMIVDQLQTCTVERYVRVQRHVDTNR 266
E N+ VRR I K PKGRE+ + I + E+Y R++R D
Sbjct: 52 EANSTQSVRRSIQLNKPKPGVDHVGAPKGREIENLKITSGNR--VAEQYARLRRRGDIYC 109
Query: 265 KGSEFQSDRKVKDDL 221
+G+E ++ + K+ L
Sbjct: 110 RGTEDEAVVRTKNCL 124