BLASTX nr result
ID: Ophiopogon24_contig00038565
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00038565
(1025 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_006576506.2| RNA-dependent RNA polymerase [Persimmon viru... 449 e-140
gb|AIU41029.1| RNA-dependent RNA polymerase, partial [Persimmon ... 306 e-101
ref|YP_009300875.1| RNA-dependent RNA polymerase [Wuhan Insect v... 250 5e-71
ref|YP_002308376.1| L protein [Lettuce yellow mottle virus] >gi|... 199 2e-53
ref|YP_009301361.1| RNA-dependent RNA polymerase [Wuhan Insect v... 197 9e-53
ref|YP_009177021.1| polymerase protein [Alfalfa dwarf virus] >gi... 197 1e-52
gb|ATS17313.1| RNA-dependent RNA polymerase [Cabbage cytorhabdov... 178 4e-46
ref|YP_425092.1| RNA-dependent RNA polymerase [Lettuce necrotic ... 175 5e-45
ref|YP_009300689.1| RNA-dependent RNA polymerase [Wuhan Insect v... 163 6e-41
ref|YP_009352236.1| L protein [Tomato yellow mottle-associated v... 148 9e-36
dbj|BAV54281.1| RNA-dependent RNA polymerase, partial [Persimmon... 120 2e-30
>ref|YP_006576506.2| RNA-dependent RNA polymerase [Persimmon virus A]
dbj|BAM36035.2| RNA-dependent RNA polymerase [Persimmon virus A]
Length = 2089
Score = 449 bits (1155), Expect = e-140
Identities = 200/341 (58%), Positives = 270/341 (79%)
Frame = +1
Query: 1 PQSYPHLIQPSVVNHANMRIDQKSMINRINDITSEGWNDDWKELTSECNVVISDIEIMGR 180
PQSYPHL+QP V + +D+K+MINR+ND++SE W DWK+ S C +V+SDIEI+G+
Sbjct: 1732 PQSYPHLMQPIAVRESKTNVDRKTMINRVNDLSSESWAKDWKDAASNCEIVVSDIEILGK 1791
Query: 181 ESCFKRDSVLKKIMGLKDWDFAIVKDYIYSLDEMCDRMRFFLSKAEHGLSLVSTGTKTPG 360
+CF+RD+VL KI+ LKDWDFAI+KDYI+S++E+ DR+R+ LSK + ++LVS G+KTPG
Sbjct: 1792 RNCFQRDNVLNKILTLKDWDFAIIKDYIFSIEELYDRLRYILSKVKGKMTLVSLGSKTPG 1851
Query: 361 LPEMWWILVKTDSSRDVQLTYDPRSLTNEWRDLVETMKTLDKGVVSSDSVREMNERIAIN 540
+PE+WW++ KTD SR VQL+YDPRS+ EW D + ++ LD+ V + +MNER+ IN
Sbjct: 1852 VPEVWWVIRKTDHSRTVQLSYDPRSIKEEWNDAMYMLEDLDRDGVPKYIMDDMNERLFIN 1911
Query: 541 TPIESMMNMVICWSTLPVIGNALPKSNNFTTLFYRLSSGKRPIYIHLERENKTLRMYTKD 720
+++M N+V WSTLP++GNALPK NFT LFYRLSSGKRP IH+ERENK LRMY KD
Sbjct: 1912 NGLDTMHNIVRYWSTLPMVGNALPKKGNFTDLFYRLSSGKRPAIIHVERENKQLRMYVKD 1971
Query: 721 HYRLREVLFGLAVSMLSNITDRNQVMSESENWLLDWERGNTTSDWYPYLYRSKNAKSSVI 900
HY++REVLFG+AV+ML+NI DR ++++ESE W+L+WE G +SDWYPYLYRS ++ SS I
Sbjct: 1972 HYKIREVLFGMAVAMLANIKDREKILNESEQWILEWELGKESSDWYPYLYRSDDSLSSKI 2031
Query: 901 RVDDYVPLLSCYMMKRRLSFGKIGQSVRFKNYKHPKKELFF 1023
V+DY+P LSC M++ RLSFGK G+S+RFKN KK++FF
Sbjct: 2032 NVNDYIPYLSCMMIRDRLSFGKFGKSIRFKNENMKKKDVFF 2072
>gb|AIU41029.1| RNA-dependent RNA polymerase, partial [Persimmon virus A]
Length = 251
Score = 306 bits (784), Expect = e-101
Identities = 138/233 (59%), Positives = 184/233 (78%)
Frame = +1
Query: 325 LSLVSTGTKTPGLPEMWWILVKTDSSRDVQLTYDPRSLTNEWRDLVETMKTLDKGVVSSD 504
++LVS G+KTPG+PE+WW++ KTD R+VQL+YDPRS+ EW D + ++ LD+ V
Sbjct: 2 MTLVSLGSKTPGVPEVWWVIRKTDHGRNVQLSYDPRSIKEEWNDAIYMLEDLDRDGVPKY 61
Query: 505 SVREMNERIAINTPIESMMNMVICWSTLPVIGNALPKSNNFTTLFYRLSSGKRPIYIHLE 684
+ +MNER+ IN +++M N+V WSTLP++GNALPK NFT LFYRLSSGKRP IH+E
Sbjct: 62 IMDDMNERLFINNGLDTMHNIVRYWSTLPMVGNALPKKGNFTDLFYRLSSGKRPAIIHVE 121
Query: 685 RENKTLRMYTKDHYRLREVLFGLAVSMLSNITDRNQVMSESENWLLDWERGNTTSDWYPY 864
RENK LRMY KDHY++REVLFG+AV+ML+NI DR ++++ESE W+L+WE G +SDWYPY
Sbjct: 122 RENKQLRMYVKDHYKIREVLFGMAVAMLANIKDRERILNESEQWILEWELGKESSDWYPY 181
Query: 865 LYRSKNAKSSVIRVDDYVPLLSCYMMKRRLSFGKIGQSVRFKNYKHPKKELFF 1023
LYRS ++ SS I V+DY+P LSC M++ RLSFGK G+S+RFKN KK++FF
Sbjct: 182 LYRSDDSLSSKINVNDYIPYLSCMMIRDRLSFGKFGKSIRFKNENMKKKDVFF 234
>ref|YP_009300875.1| RNA-dependent RNA polymerase [Wuhan Insect virus 5]
gb|AJG39185.1| RNA-dependent RNA polymerase [Wuhan Insect virus 5]
Length = 2098
Score = 250 bits (639), Expect = 5e-71
Identities = 127/342 (37%), Positives = 205/342 (59%), Gaps = 1/342 (0%)
Frame = +1
Query: 1 PQSYPHLIQPSVVNHANMRIDQKSMINRINDITSEGWNDDWKELTSECNVVISDIEIMGR 180
PQ+YPH +QP +V + +ID +MI++ NDI SE + ++W+ + + N ++SDIEI+G
Sbjct: 1737 PQTYPHSVQP-IVRSSPYKIDGSTMIDKHNDILSESYTEEWRPVMASLNSLLSDIEIIGP 1795
Query: 181 ESCFKRDSVLKKIMGLKDWDFAIVKDYIYSLDEMCDRMRFFLSKAEHGLSLVSTGTKTPG 360
E R S ++K++ + DW+ I+KDYIYSL E DR L K + LV++ ++
Sbjct: 1796 ERSDDRTSAIRKLLEICDWEGFIIKDYIYSLREFTDRCSIILPKMNGDIKLVTSKMRSVR 1855
Query: 361 LPEMWWILVKTDSSRDVQLTYDPRSLTNEWRDLVETMKTLDKGVVSSDSVREMNERIAIN 540
PE+WWI + + V+ YDPRS+ W D V ++ D + ++ R+
Sbjct: 1856 APEVWWIGQNSKAEYTVRRCYDPRSIRELWDDCVRSL-LHDTEYQDPTVLEDLTRRVLSR 1914
Query: 541 TPIESMMNMVICWSTLPVIGNALPKSNNFTTLFYRLSSGKRPIYIHLERENKTLRMYTKD 720
+ S+ ++V+ WS+L V+G LP ++T FY+L GKRP + +R+N ++ D
Sbjct: 1915 ANLASVHSVVLEWSSLAVVGKMLPSDGSYTEAFYKLYKGKRPKIVSDDRDNADRILHLSD 1974
Query: 721 HYRLREVLFGLAVSMLSNITDRNQVMSESENWLLDWERGNTTSDWYPYLYRSKNA-KSSV 897
+Y++RE+LFGLAVSM+++I R ++++ESE W+LDWE + W PYLY+S
Sbjct: 1975 YYKMREILFGLAVSMIADIKMRQRLINESELWVLDWEPNQKYTVWVPYLYKSDGRFDLPQ 2034
Query: 898 IRVDDYVPLLSCYMMKRRLSFGKIGQSVRFKNYKHPKKELFF 1023
I V DYVP LS +M K+RL F ++ +S+RF++ + L F
Sbjct: 2035 INVADYVPYLSMFMAKKRLLFREVKKSIRFRSVGGVRSHLVF 2076
>ref|YP_002308376.1| L protein [Lettuce yellow mottle virus]
gb|ABV56129.1| L protein [Lettuce yellow mottle virus]
Length = 2068
Score = 199 bits (507), Expect = 2e-53
Identities = 117/332 (35%), Positives = 180/332 (54%), Gaps = 2/332 (0%)
Frame = +1
Query: 1 PQSYPHLIQPSVVNHANMRIDQKSMINRINDITSEGWNDDWKELTSECN--VVISDIEIM 174
PQ YPH ++ N I M++R ND+ + W DW + + N V+ISDIEI
Sbjct: 1720 PQVYPHC-DSALKNTGAASIISHLMVDRANDVLHDRWETDWNPVFTSYNIQVLISDIEIT 1778
Query: 175 GRESCFKRDSVLKKIMGLKDWDFAIVKDYIYSLDEMCDRMRFFLSKAEHGLSLVSTGTKT 354
G E R +VL K++ +W FAI+KDYIYS E+ +R+ L + +++ T+
Sbjct: 1779 GEE-IETRSAVLSKMIHAHEWKFAILKDYIYSRSELENRLSIILGLYAK-VEIITCNTRQ 1836
Query: 355 PGLPEMWWILVKTDSSRDVQLTYDPRSLTNEWRDLVETMKTLDKGVVSSDSVREMNERIA 534
+PE+WWIL SS +L Y + +W + D + + + E+N R+A
Sbjct: 1837 RTMPEVWWILKDRKSSSFKRLGYHRSVIRQQWECFKNNINQRDWAL--GEVLTELNHRLA 1894
Query: 535 INTPIESMMNMVICWSTLPVIGNALPKSNNFTTLFYRLSSGKRPIYIHLERENKTLRMYT 714
+ + SMM +LP++G P N+T L L GK+PI I + R+Y+
Sbjct: 1895 SDDKLISMMVRTKSAFSLPIVGCVFPHKGNYTRLLGYLQRGKKPIDISIISTQSNKRLYS 1954
Query: 715 KDHYRLREVLFGLAVSMLSNITDRNQVMSESENWLLDWERGNTTSDWYPYLYRSKNAKSS 894
D ++R VLFG+A SM + ITDR +++ +S+ W+LDW+ +W PYL+ S++ KS+
Sbjct: 1955 SDFEKIRWVLFGIACSMCAKITDRERMLDQSDRWMLDWKPAG-ERNWAPYLWYSRH-KST 2012
Query: 895 VIRVDDYVPLLSCYMMKRRLSFGKIGQSVRFK 990
I V DY+P+LS M K RL F GQ++ FK
Sbjct: 2013 PIHVCDYIPILSLVMKKERLLFHGSGQTIEFK 2044
>ref|YP_009301361.1| RNA-dependent RNA polymerase [Wuhan Insect virus 6]
gb|AJG39191.1| RNA-dependent RNA polymerase [Wuhan Insect virus 6]
Length = 2079
Score = 197 bits (502), Expect = 9e-53
Identities = 117/335 (34%), Positives = 184/335 (54%), Gaps = 5/335 (1%)
Frame = +1
Query: 1 PQSYPHLIQPSVVNHANMRIDQKSMINRINDITSEGWNDDWKELTSECNVVISDIEIMGR 180
PQ+Y H + P +++ +D K MIN N+I W+D WK + S C++V+ D+EI+GR
Sbjct: 1722 PQTYVHNVPP-MLSDLGDDVDFKHMINLPNNILDSRWHDSWKSVVSNCDMVLCDVEILGR 1780
Query: 181 ESCFKRDSVLKKIMGLKDWDFAIVKDYIYSLDEMCDRMRFFLSKAEHGLSLVSTGTKTPG 360
+R +++KI+ + +W A++KDY++S D+MC+++R S G SLV++ ++
Sbjct: 1781 NKAKERLILMEKILRINNWRTAVIKDYLFSPDDMCNQIRRIASSQPKGWSLVTSKFRSAH 1840
Query: 361 LPEMWWILVKTDSSRDV--QLTYDP---RSLTNEWRDLVETMKTLDKGVVSSDSVREMNE 525
PE+WW++ D SR+V ++ P L+ W E M++ + +++S ++ +
Sbjct: 1841 HPEVWWLI---DRSREVTGSISVGPFVGNVLSTWWTVRRELMESYNDDILTSTDMKTL-A 1896
Query: 526 RIAINTPIESMMNMVICWSTLPVIGNALPKSNNFTTLFYRLSSGKRPIYIHLERENKTLR 705
I M V W PVIG+ LP+ +FT LFY L KRP IH R N LR
Sbjct: 1897 FINSGHNARRMETYVRSWLIFPVIGSMLPQKGSFTQLFYYLKKTKRPGKIHTVRGNSNLR 1956
Query: 706 MYTKDHYRLREVLFGLAVSMLSNITDRNQVMSESENWLLDWERGNTTSDWYPYLYRSKNA 885
+Y+ D LR +F LAVSML++I DR ++ ES W L W + DW P L RS +
Sbjct: 1957 LYSSDFSDLRIKMFALAVSMLADINDRLTMIKESSEWDLVWYE-DKYKDWRPKLTRSLDN 2015
Query: 886 KSSVIRVDDYVPLLSCYMMKRRLSFGKIGQSVRFK 990
+ V +YVP+LS M++ L F V F+
Sbjct: 2016 QLPRCEVINYVPMLSSIMLREGLIFRSHTDDVMFR 2050
>ref|YP_009177021.1| polymerase protein [Alfalfa dwarf virus]
gb|AKD44217.1| polymerase protein [Alfalfa dwarf virus]
Length = 2085
Score = 197 bits (501), Expect = 1e-52
Identities = 104/345 (30%), Positives = 187/345 (54%), Gaps = 4/345 (1%)
Frame = +1
Query: 1 PQSYPHLIQP-SVVNHANMRIDQKSMINRINDITSEGWNDDWKELTSECNVVISDIEIMG 177
P +Y H I P S+ N +D K+MIN++N+I +GW D WK T +C ++SDIEI
Sbjct: 1721 PHTYVHNISPISLKFDLNDVLDTKTMINKMNNIMDKGWTDSWKGTTLDCRALVSDIEIFR 1780
Query: 178 RESCFKRDSVLKKIMGLKDWDFAIVKDYIYSLDEMCDRMRFFLSKAEHGLSLVSTGTKTP 357
RE R L++++ LK+W FA++KDYIY+ E+ +R++ ++ + L++T ++
Sbjct: 1781 REDRAMRSRALRQLLSLKEWSFAVIKDYIYTCSELAERIQIIMTSSPSSWRLITTKLRSA 1840
Query: 358 GLPEMWWILVKTDSSRD-VQLTYDPRSLTNEWRDLVETMKTLDKGVVSSDSVREMNERIA 534
PE WW+L + D + L+ + L W + +E M + + + RE E +
Sbjct: 1841 NYPECWWVLRNSHVIEDKLGLSIETGKLNRVWNNYLEVM--TQEVELDEMTEREEIELRS 1898
Query: 535 INTP--IESMMNMVICWSTLPVIGNALPKSNNFTTLFYRLSSGKRPIYIHLERENKTLRM 708
++ P + SM++ V W +LP++G P NFT ++ + K+P ++ +R + L++
Sbjct: 1899 LHGPEVLSSMLSHVRNWLSLPIVGLLYPNGGNFTRIYLYMKKYKQPAWVKTQRVDSALKL 1958
Query: 709 YTKDHYRLREVLFGLAVSMLSNITDRNQVMSESENWLLDWERGNTTSDWYPYLYRSKNAK 888
Y KD+YRLR++L LA+ + + D + +ENW L+W T W L RS ++
Sbjct: 1959 YDKDYYRLRDILLCLALGLCESDQDVVTELKRTENWYLNWVE-KETGVWDCELTRSTTSE 2017
Query: 889 SSVIRVDDYVPLLSCYMMKRRLSFGKIGQSVRFKNYKHPKKELFF 1023
++DY+P + M+K +L I +++F+ +++ F
Sbjct: 2018 GMRADIEDYLPYVRIMMIKDQLCKYNICDTIKFRPSSRGDQDIHF 2062
>gb|ATS17313.1| RNA-dependent RNA polymerase [Cabbage cytorhabdovirus 1]
Length = 2071
Score = 178 bits (452), Expect = 4e-46
Identities = 100/342 (29%), Positives = 179/342 (52%), Gaps = 2/342 (0%)
Frame = +1
Query: 1 PQSYPHLIQPSVVNHANMRIDQKSMINRINDITSEGWNDDWKELTS-ECNVVISDIEIMG 177
PQ+YP + + + +D SMINR+NDI+ EGW W + + + +SDIEI+
Sbjct: 1722 PQAYP-MCNNAFKFSLDPDVDSSSMINRVNDISHEGWVKSWANIIPPDVDFCVSDIEIIN 1780
Query: 178 RESCFKRDSVLKKIMGLKDWDFAIVKDYIYSLDEMCDRMRFFLSKAEHGLSLVSTGTKTP 357
+ R+ V++K++ LK W ++KDY+YS E+ R+ L ++ + ++ +G +
Sbjct: 1781 PTQNYDRNQVMRKVLALKSWKMLLLKDYVYSASELESRLSIALQHSDD-VKMLFSGARQR 1839
Query: 358 GLPEMWWILVKTDSSR-DVQLTYDPRSLTNEWRDLVETMKTLDKGVVSSDSVREMNERIA 534
+PE WW++ K ++ Y R + W D + D + + + +N +
Sbjct: 1840 VVPEFWWVIKKMKQDPLKAEIGYHKRVMQEIWSDFEHHLNYSDPLI--PEILTNINHILM 1897
Query: 535 INTPIESMMNMVICWSTLPVIGNALPKSNNFTTLFYRLSSGKRPIYIHLERENKTLRMYT 714
+ ++ + W+TLP+ G+ALP ++T F L GK+P I E+++ ++Y
Sbjct: 1898 DEGRLAAITGRIKLWATLPIAGSALPHKGSYTRFFGYLQRGKKPADIRWEKDDLGRKLYM 1957
Query: 715 KDHYRLREVLFGLAVSMLSNITDRNQVMSESENWLLDWERGNTTSDWYPYLYRSKNAKSS 894
D+ +LRE+L GLA SM++ + RNQ + ++ W L W + + T W P L + + + +
Sbjct: 1958 SDYDQLREILLGLAASMIAPLDKRNQFVDSTQYWALIW-KPSRTGIWVPMLKKMERSLAP 2016
Query: 895 VIRVDDYVPLLSCYMMKRRLSFGKIGQSVRFKNYKHPKKELF 1020
+ D VP LS M + RL F + G ++ FK ++ KK F
Sbjct: 2017 A-HIYDMVPGLSIMMRRDRLLFKEYGNTIEFKPDRNRKKLCF 2057
>ref|YP_425092.1| RNA-dependent RNA polymerase [Lettuce necrotic yellows virus]
sp|Q4W382.1|L_LNYV3 RecName: Full=RNA-directed RNA polymerase L; Short=Protein L;
AltName: Full=Large structural protein; AltName:
Full=Replicase; AltName: Full=Transcriptase; Includes:
RecName: Full=RNA-directed RNA polymerase; Includes:
RecName: Full=mRNA (guanine-N(7)-)-methyltransferase;
Includes: RecName: Full=GDP
polyribonucleotidyltransferase; Includes: RecName:
Full=Cap-specific mRNA
(nucleoside-2'-O-)-methyltransferase 2
emb|CAG34091.1| putative polymerase [Lettuce necrotic yellows virus]
emb|CAI30426.1| RNA-dependent RNA polymerase [Lettuce necrotic yellows virus]
Length = 2068
Score = 175 bits (444), Expect = 5e-45
Identities = 108/332 (32%), Positives = 178/332 (53%), Gaps = 2/332 (0%)
Frame = +1
Query: 1 PQSYPHLIQPSVVNHANMRIDQKSMINRINDITSEGWNDDWKEL--TSECNVVISDIEIM 174
PQ YP+ + S ++A + M+ R+ND+ W +DWK + + E ++ ISDIEI
Sbjct: 1721 PQVYPNCDKGSS-SYARGTVISDLMVTRVNDVNHLLWGEDWKPVFQSYETDLCISDIEIN 1779
Query: 175 GRESCFKRDSVLKKIMGLKDWDFAIVKDYIYSLDEMCDRMRFFLSKAEHGLSLVSTGTKT 354
G + R +++ + DW I+KDYIY++ EM +R+ L + L L++ ++
Sbjct: 1780 GELNGESRQTMIATVTMAHDWKMVIMKDYIYNMREMENRLSILLPVFK-SLELITCNSRQ 1838
Query: 355 PGLPEMWWILVKTDSSRDVQLTYDPRSLTNEWRDLVETMKTLDKGVVSSDSVREMNERIA 534
+PE+WWI+ SS + L Y + W + E + T D + S S E+N IA
Sbjct: 1839 RVMPEVWWIMKARRSSGKL-LGYHRSVIRQIWDGVKEGINTADWAMESVFS--EINRTIA 1895
Query: 535 INTPIESMMNMVICWSTLPVIGNALPKSNNFTTLFYRLSSGKRPIYIHLERENKTLRMYT 714
+ +M + + +LP++G+ LP ++T L L GK+P I L + R+Y
Sbjct: 1896 STADMIAMTIRLKAFFSLPIVGSVLPYKGSYTRLLGYLQRGKKPEDISLITSDDGKRLYL 1955
Query: 715 KDHYRLREVLFGLAVSMLSNITDRNQVMSESENWLLDWERGNTTSDWYPYLYRSKNAKSS 894
D+ ++R VLFGLAV M S+ T+R++++ ESE W +DW W PYL++ +S+
Sbjct: 1956 SDYEKVRSVLFGLAVGMCSSATERDRMLDESEYWAIDWIPSG-PHIWLPYLFKGVE-RST 2013
Query: 895 VIRVDDYVPLLSCYMMKRRLSFGKIGQSVRFK 990
+I V DY+P+L+ M + RL F + FK
Sbjct: 2014 LIHVYDYIPMLTLIMKRERLLFKSSSDIIEFK 2045
>ref|YP_009300689.1| RNA-dependent RNA polymerase [Wuhan Insect virus 4]
gb|AJG39179.1| RNA-dependent RNA polymerase [Wuhan Insect virus 4]
Length = 2105
Score = 163 bits (413), Expect = 6e-41
Identities = 88/336 (26%), Positives = 174/336 (51%), Gaps = 7/336 (2%)
Frame = +1
Query: 1 PQSYPHLIQPSVVNHANMRIDQKSMINRINDITSEGWNDDWKELTSECNVVISDIEIMGR 180
PQ+ PHL ++ N +N ID+ SM+N++N+I + W +DW+ + S C ++ISDIE++G
Sbjct: 1754 PQTMPHLFDHTM-NLSN--IDKTSMVNKVNNILDDRWGEDWEPIASVCGILISDIELIGE 1810
Query: 181 ESCFKRDSVLKKIMGLKDWDFAIVKDYIYSLDEMCDRMRFFLSKAEHGLSLVSTGTKTPG 360
R+ + +K++ + W A +KDY+Y+ E+ R+ + + L+++ +
Sbjct: 1811 NRYQDRELMFRKLLSVTSWKIACIKDYVYNYRELSRRVDIIV-RGSVSFELLTSVHRQRK 1869
Query: 361 LPEMWWILVKTD------SSRDVQLTYDPRSLTNEWRDLVETMKTLDK-GVVSSDSVREM 519
LPE+WW++ + + L + P +T+ W + TM L K + E+
Sbjct: 1870 LPEVWWVIKNSTLIDMGFDDNETCLNFVPEIMTSFWSN---TMSGLCKRNAIEWPLTLEI 1926
Query: 520 NERIAINTPIESMMNMVICWSTLPVIGNALPKSNNFTTLFYRLSSGKRPIYIHLERENKT 699
++ + + +SM+ + T+P +G +P NNFT + +L SG RP + R ++
Sbjct: 1927 DDHLLNKSMYDSMIQRARIYCTVPTVGCLIPHQNNFTRVLGKLQSGFRPAKVSFSRWERS 1986
Query: 700 LRMYTKDHYRLREVLFGLAVSMLSNITDRNQVMSESENWLLDWERGNTTSDWYPYLYRSK 879
+++Y + +L E+L +A SM+SN+ R ++ + ++ W T+ W P L +
Sbjct: 1987 VKLYKSNEIKLTEILIIIAASMISNVKTRVDFINNARFMMVKWSGKPNTNTWMPRLEMNT 2046
Query: 880 NAKSSVIRVDDYVPLLSCYMMKRRLSFGKIGQSVRF 987
DY+ +L+ + K++L F ++ ++F
Sbjct: 2047 ERNPGFEVNIDYIGVLNRFFNKQQLCFREVSFPIKF 2082
>ref|YP_009352236.1| L protein [Tomato yellow mottle-associated virus]
gb|AQY17505.1| L protein [Tomato yellow mottle-associated virus]
Length = 2085
Score = 148 bits (374), Expect = 9e-36
Identities = 87/333 (26%), Positives = 161/333 (48%), Gaps = 3/333 (0%)
Frame = +1
Query: 1 PQSYPHLIQPSVVNHANMRIDQKSMINRINDITSEGWNDDWKELTSECNVVISDIEIMGR 180
P +Y H + P + ID NR ND+ ++ W+ DW E C+V+ SD E++
Sbjct: 1726 PHAYSHNVLPVPQFYGIGNIDATKAANRHNDVRNQAWSSDWAEELRSCDVLYSDAEVVNP 1785
Query: 181 ESCFKRDSVLKKIMGLKDWDFAIVKDYIYSLDEMCDRMRFFLSKAEHGLSLVSTGTKTPG 360
+ R ++KKI ++KDYI+S +E+ +++ + L++T ++
Sbjct: 1786 DDHESRFELVKKIALSGRRPVTVIKDYIWSAEELSNKIGIMWASRARRWELITTRFRSHN 1845
Query: 361 LPEMWWILVKTDSSRDVQLTYD-PRSLTNEWRDLVETMKTLDKGVVSSDS--VREMNERI 531
PE+WW+L S + Y P + W + +K+ + + D+ + +++R
Sbjct: 1846 YPEVWWVLHDAVSPTSDTILYPIPNKVQCLWIGIERALKSHEYSISGEDNALISSLHDR- 1904
Query: 532 AINTPIESMMNMVICWSTLPVIGNALPKSNNFTTLFYRLSSGKRPIYIHLERENKTLRMY 711
+ M++ V W+ +IG+ LPK+ ++T+L+Y + KRP I E+ + ++Y
Sbjct: 1905 ---QMLYKMISRVRAWAVFDLIGSLLPKNGSYTSLYYYILKTKRPFSIKAS-ESSSHKLY 1960
Query: 712 TKDHYRLREVLFGLAVSMLSNITDRNQVMSESENWLLDWERGNTTSDWYPYLYRSKNAKS 891
D+ LR LF +AVSM++++ DR +++ S +W L W++ + W L +
Sbjct: 1961 KSDYLELRGKLFAIAVSMMADVNDRLSMINRSHHWSLIWKK--YSDKWDVSLEEKEEINE 2018
Query: 892 SVIRVDDYVPLLSCYMMKRRLSFGKIGQSVRFK 990
V YVP L+ M + L F V F+
Sbjct: 2019 PPCDVIKYVPALNLMMKEHGLLFKNCSNKVEFR 2051
>dbj|BAV54281.1| RNA-dependent RNA polymerase, partial [Persimmon virus A]
Length = 82
Score = 120 bits (301), Expect = 2e-30
Identities = 51/82 (62%), Positives = 69/82 (84%)
Frame = +1
Query: 718 DHYRLREVLFGLAVSMLSNITDRNQVMSESENWLLDWERGNTTSDWYPYLYRSKNAKSSV 897
DHY++REVLFG+AV+ML+NI DR ++++ESE W+L+WE G +SDWYPYLYRS ++ SS
Sbjct: 1 DHYKIREVLFGMAVAMLANIKDREKILNESEQWILEWELGKESSDWYPYLYRSDDSLSSK 60
Query: 898 IRVDDYVPLLSCYMMKRRLSFG 963
I V+DY+P LSC M++ RLSFG
Sbjct: 61 INVNDYIPYLSCMMIRDRLSFG 82