BLASTX nr result

ID: Ophiopogon24_contig00038509 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00038509
         (497 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKK56644.1| hypothetical protein RhiirC2_721737, partial [Rhi...   121   4e-32
gb|PKK73034.1| hypothetical protein RhiirC2_741655, partial [Rhi...    51   8e-06

>gb|PKK56644.1| hypothetical protein RhiirC2_721737, partial [Rhizophagus
           irregularis]
          Length = 145

 Score =  121 bits (303), Expect = 4e-32
 Identities = 69/101 (68%), Positives = 77/101 (76%), Gaps = 6/101 (5%)
 Frame = -2

Query: 355 SECPSLVEIEALSIGMELVQLESILEPILNLKDSGSLGLKTTFNHKNPFE*LMWN*IRTD 176
           SECPSLVEIEALSIGMELVQLESILEPILNLKDSGSLGLKTTFNHKNPFE       +++
Sbjct: 17  SECPSLVEIEALSIGMELVQLESILEPILNLKDSGSLGLKTTFNHKNPFEYAEDFSEKSN 76

Query: 175 EL------ISIPTYLCSPFRCGGFQQPDLKSATRSLKNIDF 71
            +      IS+  +    +    F+QPDLKSATRSLKNIDF
Sbjct: 77  NIYLMFLYISLTNHFLIFWNFPFFRQPDLKSATRSLKNIDF 117


>gb|PKK73034.1| hypothetical protein RhiirC2_741655, partial [Rhizophagus
           irregularis]
          Length = 60

 Score = 51.2 bits (121), Expect = 8e-06
 Identities = 28/41 (68%), Positives = 30/41 (73%)
 Frame = -2

Query: 298 QLESILEPILNLKDSGSLGLKTTFNHKNPFE*LMWN*IRTD 176
           +LESILEPILNLKDSGSL  K TFNHKN  E      +RTD
Sbjct: 25  RLESILEPILNLKDSGSLRFKITFNHKNRSE------LRTD 59


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