BLASTX nr result

ID: Ophiopogon24_contig00038429 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00038429
         (407 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020672082.1| uncharacterized protein LOC110092068 [Dendro...    56   1e-06
gb|PKU62449.1| putative nucleoredoxin 2 [Dendrobium catenatum]         55   6e-06

>ref|XP_020672082.1| uncharacterized protein LOC110092068 [Dendrobium catenatum]
          Length = 208

 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 43/126 (34%), Positives = 60/126 (47%), Gaps = 6/126 (4%)
 Frame = -3

Query: 360 PSAGRPRHLSAGPSFEFRQARTAAPSSSPADLLFTNGKIVPQNSPSPADSNGSISRRRCL 181
           P   R       P FEFR +   +  SSPADLLF+NG ++P++ P    +N    R RCL
Sbjct: 27  PETSRNPSPPGDPLFEFRPSPELSYPSSPADLLFSNGLLLPRSLPPETGAN---DRPRCL 83

Query: 180 K----QEGSGRRSADSAPKRVSFH-ESLLTPKRSTSTPLPERRN-RVILGDVLQLKSKGE 19
           K      G  R+   SA KRVSF      +P   T   + + RN    +  V +   + E
Sbjct: 84  KDPAGHRGGSRKLTMSASKRVSFQLVDAGSPPAITGRSIQQARNGGRHVRPVARRPGRKE 143

Query: 18  AGKSKG 1
           AG+ +G
Sbjct: 144 AGRRRG 149


>gb|PKU62449.1| putative nucleoredoxin 2 [Dendrobium catenatum]
          Length = 604

 Score = 54.7 bits (130), Expect = 6e-06
 Identities = 35/89 (39%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
 Frame = -3

Query: 360 PSAGRPRHLSAGPSFEFRQARTAAPSSSPADLLFTNGKIVPQNSPSPADSNGSISRRRCL 181
           P   R       P FEFR +   +  SSPADLLF+NG ++P++ P    +N    R RCL
Sbjct: 22  PETSRNPSPPGDPLFEFRPSPELSYPSSPADLLFSNGLLLPRSLPPETGAN---DRPRCL 78

Query: 180 K----QEGSGRRSADSAPKRVSFHESLLT 106
           K      G  R+   SA KRVSF   + T
Sbjct: 79  KDPAGHRGGSRKLTMSASKRVSFQLVITT 107


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