BLASTX nr result
ID: Ophiopogon24_contig00038351
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00038351
(1598 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AIF33766.2| RNA-dependent RNA polymerase [Heterobasidion mito... 100 1e-18
gb|ALD89119.1| RNA-dependent RNA polymerase, partial [Rhizoctoni... 92 8e-16
gb|ALD89120.1| RNA-dependent RNA polymerase [Rhizoctonia solani ... 81 3e-12
gb|ALD89126.1| RNA-dependent RNA polymerase, partial [Rhizoctoni... 80 4e-12
ref|YP_005352912.1| RNA dependent RNA polymerase [Clitocybe odor... 77 6e-11
gb|ALD89128.1| RNA-dependent RNA polymerase, partial [Rhizoctoni... 75 1e-10
gb|AVA17449.1| RNA-dependent RNA polymerase [Gigaspora margarita... 74 6e-10
gb|ALD89118.1| RNA-dependent RNA polymerase [Rhizoctonia solani ... 72 3e-09
gb|AMM45292.1| putative replicase [Macrophomina phaseolina mitov... 71 4e-09
gb|ALD89117.1| RNA-dependent RNA polymerase [Rhizoctonia solani ... 70 6e-09
gb|ALD89122.1| RNA-dependent RNA polymerase, partial [Rhizoctoni... 64 5e-07
ref|YP_004564622.1| RNA-dependent RNA polymerase [Tuber aestivum... 61 6e-06
>gb|AIF33766.2| RNA-dependent RNA polymerase [Heterobasidion mitovirus 1]
Length = 836
Score = 100 bits (250), Expect = 1e-18
Identities = 94/353 (26%), Positives = 162/353 (45%), Gaps = 14/353 (3%)
Frame = +1
Query: 577 KEQGWRGVVIRLKANATLLQQVAGGHKLDNPRLLGCAISRSRQGIPRVIPTLHRKRIVSG 756
K QG +G V+ LK + LQQ GH L + LG ++R++ G+P+ +P L R+ IV G
Sbjct: 72 KRQGIKGAVMHLKVSGVALQQAIAGHVLKDLTPLGPRVARTKSGLPKFLPLLWRQEIVKG 131
Query: 757 DRWTVRIWISFFWLYRVIEVPGKLKLSSITRPFEVNYLIIMEWTRWLVLFFPVFL-GFIG 933
+ + + + ++ L+RV++ P + KL +IT PF+ N +++ +++ ++ + L I
Sbjct: 132 NTFIIILALTMISLFRVLKFPAQAKLGTITNPFKGNRQVMLSLQKYIPVYVGMILQPLIR 191
Query: 934 RAQDAQVFIQKRRSRPLNRTETSSLLQLLSKPLEFVERLTALWAPNVESSAKASLPRKEW 1113
R DA +++ R T+ L S P T++ A + S++ S+ R +
Sbjct: 192 RGMDATDWVKGR---------TTPFPILTSSP-------TSVSADDEISTSPHSIWRAIY 235
Query: 1114 KGLMKPILVDLQPRPLMLLNSGPNSAKG--------QDESPGPS---TRTNIGSLLTDAK 1260
+ + ++ P S KG Q S G S TR G
Sbjct: 236 SFVQRNVIA----------GGDPGSPKGGTLYHALLQIMSLGGSNVTTRFTWGKFSQGTL 285
Query: 1261 LW--MDDREGLFSSIRGLWPKAAGFAQTLLAQAKAVYEQLESLGVVGEYAVFFKQDSQGV 1434
W +D + F ++ + ++ L+A + +++ G V F ++ +G
Sbjct: 286 NWYDIDMNDKSFETMWHFYQES-----NLVAWVMDMGKKIFGTG------VRFSRNEKG- 333
Query: 1435 WSSDPLPGFSAPWGLGKLGFIAEPAMKIRIVAMCDSLTQMLLRPLHDAVFEIL 1593
P P LGKLGF E A K+R+ AM D LTQ LRP+H +F +L
Sbjct: 334 ----PARTSWEPLSLGKLGFHDEAAGKVRVFAMVDPLTQWALRPIHKLLFLLL 382
>gb|ALD89119.1| RNA-dependent RNA polymerase, partial [Rhizoctonia solani mitovirus
14]
Length = 1024
Score = 92.4 bits (228), Expect = 8e-16
Identities = 98/352 (27%), Positives = 144/352 (40%), Gaps = 6/352 (1%)
Frame = +1
Query: 556 RYVASLHKEQGWRGVVIRLKANATLLQQVAGGHKLDNPRLLGCAISRSRQGIPRVIPTLH 735
R + + + QG RG+VI LKA LL Q GH + + LG +SR+ G+PRVI
Sbjct: 211 RKFSKIGQTQGIRGLVIYLKACHVLLTQSCAGHMIKDTGSLGVRVSRTNTGMPRVILVQD 270
Query: 736 RKRIVSGDRWTVRIWISFFWLYRVIEVPGKLKLSSITRPFEVNY-LIIMEWTRWLVLFFP 912
R +I + ++ + + F LYR++ GKLKL+SIT F +Y II E + F
Sbjct: 271 RIKIRGDNHLLIKFYQTLFGLYRILSFEGKLKLNSITSSFTGSYQFIIGEIIPLIPKFIS 330
Query: 913 VFL-----GFIGRAQDAQVFIQKRRSRPLNRTETSSLLQLLSKPLEFVERLTALWAPNVE 1077
L GF RA + R + ET LS+ W
Sbjct: 331 ALLQKYPSGFPKRAIEV-------RWVGFKKIETLGSPDFLSEIKRRYAEFVPFWL---- 379
Query: 1078 SSAKASLPRKEWKGLMKPILVDLQPRPLMLLNSGPNSAKGQDESPGPSTRTNIGSLLTDA 1257
A++++ KE L+++ PL++L + + + +
Sbjct: 380 --ARSAIGTKE-------DLIEVSSHPLLMLRT--------------------AATIKAS 410
Query: 1258 KLWMDDREGLFSSIRGLWPKAAGFAQTLLAQAKAVYEQLESLGVVGEYAVFFKQDSQGVW 1437
+W D F L+P A F +++ V +V K
Sbjct: 411 PIWGD-----FKKFLNLFPVNAPF--------------VKAFNAVDGISVPLK------- 444
Query: 1438 SSDPLPGFSAPWGLGKLGFIAEPAMKIRIVAMCDSLTQMLLRPLHDAVFEIL 1593
PLP LGKLG E A K+R+ AM + Q LLRPLHD +FEIL
Sbjct: 445 ---PLP------SLGKLGLKEEAAGKVRVFAMVPTWFQNLLRPLHDIIFEIL 487
>gb|ALD89120.1| RNA-dependent RNA polymerase [Rhizoctonia solani mitovirus 15]
Length = 961
Score = 80.9 bits (198), Expect = 3e-12
Identities = 53/161 (32%), Positives = 84/161 (52%)
Frame = +1
Query: 376 NRMQLLEIVNMKKFNITHSGFCWQPVRNIGLTLGAALRRVVALREGGPTTNWCQTALYFG 555
NR+ + K N T V+ GL G LR ++ + T + +T L F
Sbjct: 147 NRISSGVSITQTKINATFG------VKAKGLLAGVFLRTLLPIGLS-KTASRAKTILIFL 199
Query: 556 RYVASLHKEQGWRGVVIRLKANATLLQQVAGGHKLDNPRLLGCAISRSRQGIPRVIPTLH 735
++ +HK QG +G+V LKA+ L QQ GG +L + L +R++ G+P+++
Sbjct: 200 QFAKHIHKSQGMKGLVNYLKASQVLFQQHLGGFRLYDCTDLKTRPARNKAGMPKIVRPQD 259
Query: 736 RKRIVSGDRWTVRIWISFFWLYRVIEVPGKLKLSSITRPFE 858
R I +GD + +++ F LYRV+E PGKLKL +IT F+
Sbjct: 260 RALIRAGDWRVAKFYMTLFSLYRVLEFPGKLKLETITMAFQ 300
>gb|ALD89126.1| RNA-dependent RNA polymerase, partial [Rhizoctonia solani mitovirus
7]
Length = 871
Score = 80.5 bits (197), Expect = 4e-12
Identities = 40/100 (40%), Positives = 62/100 (62%)
Frame = +1
Query: 550 FGRYVASLHKEQGWRGVVIRLKANATLLQQVAGGHKLDNPRLLGCAISRSRQGIPRVIPT 729
F + + L + G +G + LK +A +LQQ GGH + + L +SR+ +G+PR IP
Sbjct: 37 FLKLTSILFRNNGAKGACLILKVHAVILQQACGGHIVKDLTELKFRVSRTNRGLPRAIPV 96
Query: 730 LHRKRIVSGDRWTVRIWISFFWLYRVIEVPGKLKLSSITR 849
HR+ I SG T+R+W++ F LYRVIE G +LSS+++
Sbjct: 97 QHRELIRSGHLETIRLWLTLFNLYRVIEFDGDYRLSSLSK 136
>ref|YP_005352912.1| RNA dependent RNA polymerase [Clitocybe odora virus]
emb|CCG47524.1| RNA dependent RNA polymerase [Clitocybe odora virus]
Length = 1136
Score = 77.0 bits (188), Expect = 6e-11
Identities = 70/242 (28%), Positives = 115/242 (47%), Gaps = 5/242 (2%)
Frame = +1
Query: 451 VRNIGLTLGAALRRVVALREGGPTTNWCQTALYFGRYVASLHKEQGWRGVVIRLKANATL 630
+RN L++ + R++ +G T + + + K QG G+V LKA + L
Sbjct: 65 IRNNSLSMVGMVLRLIPTMQGKLTPAIAKDTKSILSQFSRIAKCQGIVGLVKYLKACSVL 124
Query: 631 LQQVAGGHKLDN--PRLLGCAISRSRQGIPRVIPTLHRKRIVSGDRWTVRIWISFFWLYR 804
QQ G K+DN PR +SR+ GIPR++P R+ I G +R+ ++ F L+R
Sbjct: 125 TQQSISGFKVDNFSPR-----VSRTNSGIPRILPVHCRRMIRQGHLVYMRLSLTIFSLFR 179
Query: 805 VIEVPGKLKLSSITRPFEVNYLIIMEWTRWLVLFFPVFLGFIGRA---QDAQVFIQKRRS 975
V+ PGK+K+S+IT P+ +I T+ + F +F GR+ + + V I K
Sbjct: 180 VMRYPGKMKISTITAPYSGTEQMIRIVTKDIPRFVRLFCPSAGRSLIGRFSYVVINKSSP 239
Query: 976 RPLNRTETSSLLQLLSKPLEFVERLTALWAPNVESSAKASLPRKEWKGLMKPILVDLQPR 1155
L ++ L+ L F T ++E A+AS P E + ++ P + P
Sbjct: 240 MALRGIASTHPTSLIRAALAF----TPKQVESLELLARASHP--ESQVVITPEGIKEPPT 293
Query: 1156 PL 1161
PL
Sbjct: 294 PL 295
>gb|ALD89128.1| RNA-dependent RNA polymerase, partial [Rhizoctonia solani mitovirus
9]
Length = 524
Score = 75.5 bits (184), Expect = 1e-10
Identities = 42/102 (41%), Positives = 59/102 (57%)
Frame = +1
Query: 544 LYFGRYVASLHKEQGWRGVVIRLKANATLLQQVAGGHKLDNPRLLGCAISRSRQGIPRVI 723
+ F R+ L K G +G + LK A LQQ GGHK+ + L +SR+ GIPRVI
Sbjct: 55 IVFLRHTYRLFKYNGAKGACLILKVYAVTLQQSIGGHKVKDLTELKFRVSRTNGGIPRVI 114
Query: 724 PTLHRKRIVSGDRWTVRIWISFFWLYRVIEVPGKLKLSSITR 849
P RK I +GD +R ++S F YR+IE G ++L S+T+
Sbjct: 115 PVELRKAIRAGDTKVIRFYLSLFNFYRMIEFKGDMRLVSLTK 156
>gb|AVA17449.1| RNA-dependent RNA polymerase [Gigaspora margarita mitovirus 1]
Length = 794
Score = 73.6 bits (179), Expect = 6e-10
Identities = 50/161 (31%), Positives = 84/161 (52%), Gaps = 6/161 (3%)
Frame = +1
Query: 388 LLEIVNMKKFNITHSGFCWQPVRNIGLT----LGAALRRVVALREGGPTTNWCQTALYFG 555
LL ++ + K +T P+R + + L AL V L G + + + ++
Sbjct: 5 LLSLIRVAKERVTVRPV---PLRRLNVKVWHHLFPALVSVGRLVIGRISRDRIKVLAFWA 61
Query: 556 RYVASLHKEQGWRGVVIRLKA-NATLLQQVAGGHKLDNPRLLG-CAISRSRQGIPRVIPT 729
+ ++ ++QG +G + LK N ++ + G R + A+S SR G+PRVIP
Sbjct: 62 KQCVAMIRKQGVKGTCLWLKTINVLIMASLPGSQLKSQSRAISKVAVSVSRDGLPRVIPK 121
Query: 730 LHRKRIVSGDRWTVRIWISFFWLYRVIEVPGKLKLSSITRP 852
R+ I +GD T+R+W+S +YRV+E PGK K+S+IT P
Sbjct: 122 QDRRAIRAGDTNTIRLWLSLSGMYRVLEFPGKAKISTITDP 162
>gb|ALD89118.1| RNA-dependent RNA polymerase [Rhizoctonia solani mitovirus 13]
Length = 917
Score = 71.6 bits (174), Expect = 3e-09
Identities = 48/149 (32%), Positives = 79/149 (53%), Gaps = 5/149 (3%)
Frame = +1
Query: 550 FGRYVASLHKEQGWRGVVIRLKANATLLQQVAGGHKLDNPRLLGCAISRSR---QGIPRV 720
F Y ++K G VV LKA +Q+ G K+++ R L + +S+ G+P +
Sbjct: 111 FQSYCFRMYKVHGPEQVVKFLKAAQLAVQKSIGKDKINSLRDLDKDLLKSKLTGYGLPTI 170
Query: 721 IPTLHRKRIVSGDRWTVRIWISFFWLYRVIEVPGKLKLSSITRPFE--VNYLIIMEWTRW 894
IP+ RK I SG + +R W++ F +YRVI++ GKLKL +I +PFE +YLI+ +
Sbjct: 171 IPSRDRKLIASGAQPVIRFWLTLFSVYRVIDIAGKLKLETIIQPFEGASDYLIVRD---- 226
Query: 895 LVLFFPVFLGFIGRAQDAQVFIQKRRSRP 981
F F+ + + +F + S+P
Sbjct: 227 ------QFYAFLKASSSSTLFNIRSLSKP 249
>gb|AMM45292.1| putative replicase [Macrophomina phaseolina mitovirus 3]
Length = 1029
Score = 71.2 bits (173), Expect = 4e-09
Identities = 41/134 (30%), Positives = 73/134 (54%)
Frame = +1
Query: 520 TTNWCQTALYFGRYVASLHKEQGWRGVVIRLKANATLLQQVAGGHKLDNPRLLGCAISRS 699
T + + L F R + + + QG +G+ + LK++ +LQQ GGH + LG +SR+
Sbjct: 210 TVSTVRQLLTFARVCSHILETQGPKGLTLFLKSSTVMLQQSLGGHVTHSLTPLGPRVSRT 269
Query: 700 RQGIPRVIPTLHRKRIVSGDRWTVRIWISFFWLYRVIEVPGKLKLSSITRPFEVNYLIIM 879
+ G+PR +R RI +G+ +R+ ++ LYRVI+ PGKL ++I + + I+
Sbjct: 270 KAGLPRFFNVTYRMRIRNGETAAIRLALTLVNLYRVIKYPGKLSWNTIIKANTGDNSIVP 329
Query: 880 EWTRWLVLFFPVFL 921
+ LF +F+
Sbjct: 330 YLRGMIPLFVSLFI 343
>gb|ALD89117.1| RNA-dependent RNA polymerase [Rhizoctonia solani mitovirus 12]
Length = 746
Score = 70.5 bits (171), Expect = 6e-09
Identities = 47/144 (32%), Positives = 76/144 (52%), Gaps = 4/144 (2%)
Frame = +1
Query: 502 LREGGPTTNWCQTALYFGRYVASLHKEQGWRGVVIRLKA-NATLLQQVAG--GHKLDNPR 672
L EG + + + F L K G + +VI LKA N L+Q +AG G + N
Sbjct: 20 LMEGRLSNGTVRVTIVFLSKCYRLQKMSGLKFLVIYLKAQNVNLMQALAGTAGKDITN-- 77
Query: 673 LLGCAISRSRQG-IPRVIPTLHRKRIVSGDRWTVRIWISFFWLYRVIEVPGKLKLSSITR 849
LGC +R R +P++IP LHR I +G + +++W + F LYRV+ PG L LS+I
Sbjct: 78 -LGCRFARKRGSKLPQIIPILHRVHIRNGKVYYIKLWTTLFNLYRVLSFPGLLNLSTIVD 136
Query: 850 PFEVNYLIIMEWTRWLVLFFPVFL 921
P + + +++ + + F+ + L
Sbjct: 137 PSSLRQDLFYQFSVFALTFWKLLL 160
>gb|ALD89122.1| RNA-dependent RNA polymerase, partial [Rhizoctonia solani mitovirus
3]
Length = 748
Score = 64.3 bits (155), Expect = 5e-07
Identities = 34/104 (32%), Positives = 59/104 (56%)
Frame = +1
Query: 541 ALYFGRYVASLHKEQGWRGVVIRLKANATLLQQVAGGHKLDNPRLLGCAISRSRQGIPRV 720
+L+ R+ + + +G++ + + LKA+ L V G L N L G +S + G+PR
Sbjct: 17 SLHLCRFASVKVRREGYKSLSLYLKASTQYLFAVQSGKPLSNSALFGPHVSLTGGGVPRF 76
Query: 721 IPTLHRKRIVSGDRWTVRIWISFFWLYRVIEVPGKLKLSSITRP 852
IP R++ +S W + +SF LYRV+EVPG++ + +I +P
Sbjct: 77 IPVFWRRK-MSYPCWEFTLVLSFCGLYRVLEVPGRINIKTIVQP 119
>ref|YP_004564622.1| RNA-dependent RNA polymerase [Tuber aestivum mitovirus]
gb|AEG79311.1| RNA-dependent RNA polymerase [Tuber aestivum mitovirus]
Length = 793
Score = 60.8 bits (146), Expect = 6e-06
Identities = 45/114 (39%), Positives = 63/114 (55%), Gaps = 3/114 (2%)
Frame = +1
Query: 514 GPTTNWCQTALYFGRYVASLHK---EQGWRGVVIRLKANATLLQQVAGGHKLDNPRLLGC 684
G TT LY V +LHK QG RG+ IRLKA++T L + G L + + G
Sbjct: 14 GKTTKELIIGLY--SCVQTLHKIYLSQGSRGLAIRLKASSTYLMKSWSGDPLLDCKAFGP 71
Query: 685 AISRSRQGIPRVIPTLHRKRIVSGDRWTVRIWISFFWLYRVIEVPGKLKLSSIT 846
+S + +GIP IP+ R +I S + R+ ++ LYRV+ GKLKLS+IT
Sbjct: 72 TMSLTPRGIPIWIPSAWRCQISSRNLAIFRVTMTLCNLYRVLPYQGKLKLSTIT 125