BLASTX nr result

ID: Ophiopogon24_contig00038336 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00038336
         (642 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_006576504.1| matrix protein [Persimmon virus A] >gi|39976...   191   3e-58

>ref|YP_006576504.1| matrix protein [Persimmon virus A]
 dbj|BAM36033.1| matrix protein [Persimmon virus A]
          Length = 188

 Score =  191 bits (484), Expect = 3e-58
 Identities = 88/171 (51%), Positives = 122/171 (71%)
 Frame = -3

Query: 613 MENSQSPKAHQKDSVLMDDVRYYIIEFPESKFVLSQINTPKIAALHLTQEQLDHAYSSIL 434
           ME+    K+ + DSV + D+ YY+IEF E KF+LSQ+  P+    HLT+ QL HA+ +++
Sbjct: 17  MESQSETKSSKLDSVSLSDMHYYMIEFDEPKFMLSQVPQPEKKGTHLTESQLGHAFEAVV 76

Query: 433 EKLCTDPDIRTLFIHLKTADVTKIILDKKRDMMLGPNTLRSTFVFPKKIMIPSANRLKVG 254
            K+  D D++ L IH+   +V K +LDKKRDMMLGPN LR+TFVFP K M+PS   +KVG
Sbjct: 77  SKISNDEDVKALLIHMMKNNVIKTVLDKKRDMMLGPNVLRATFVFPNKAMLPSQKPMKVG 136

Query: 253 KHAFSSMGKRIVLDKIPFILMIKLELNIREISESEAITVFDGCPSLCVAGM 101
            H+ S +GKR  +DKI  I+M+KL +N+RE+SE +AI VF+G P +CVAGM
Sbjct: 137 MHSLSMVGKRFAVDKIEMIIMLKLNINLRELSEMDAIKVFEGFPHMCVAGM 187


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