BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00038252
         (996 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ALM62238.1| RNA-dependent RNA polymerase [Soybean leaf-associ...   107   8e-22
gb|ALD89138.1| RNA-dependent RNA polymerase [Sclerotinia sclerot...   101   5e-20
gb|ALM62250.1| RNA-dependent RNA polymerase, partial [Soybean le...   100   1e-19
emb|SBQ28480.1| RNA dependent RNA polymerase [Magnaporthe oryzae...    90   5e-16
gb|ALD89131.1| RNA-dependent RNA polymerase, partial [Rhizoctoni...    77   9e-12
ref|YP_009182165.1| RNA dependent RNA polymerase [Botrytis ourmi...    59   6e-06

>gb|ALM62238.1| RNA-dependent RNA polymerase [Soybean leaf-associated ourmiavirus
           1]
          Length = 731

 Score =  107 bits (266), Expect = 8e-22
 Identities = 79/199 (39%), Positives = 100/199 (50%), Gaps = 4/199 (2%)
 Frame = -1

Query: 585 SLKKLLPNPCHCITHDIEGKTLRLLDSDPIELPEDYLDHVSKVTRKIFQKAQFKNRKTYE 406
           S+KKLLP  C C+ H + G     L   P  LP  YL    KV+R+IF K  + +R  + 
Sbjct: 114 SVKKLLPASCKCLKHGMLGDLRVRLSRPPPSLPVGYLSFARKVSREIFTKG-WDHR--WG 170

Query: 405 DYVRSATLSLGACAENSRRKGGNKG-LSLWNREEWFELHFDEDYFTSSVSVLEGRPLVRY 229
             V + + SLG+C   SR+ GG    LS+  ++ W      E         LEG  L   
Sbjct: 171 SKVSTFSPSLGSCIGKSRKHGGQLSELSVAGQQAW-----QESLNLPLPGSLEGELL--- 222

Query: 228 NLVVDSGKARGITMNTGNHQVLRPLHKKLYDVISGERWLLRGDATADRF---CFDGRDGG 58
            LV  SGK R +T        LRPLH  LYD +S + WLLRG+ TA++     FD     
Sbjct: 223 -LVDSSGKPRPLTRFVSEAATLRPLHGLLYDTLSKQPWLLRGEITAEKLRGAGFDRAREE 281

Query: 57  LFVSGDYTSATDNLPIEVA 1
              SGDY SATDNL IEVA
Sbjct: 282 PLTSGDYKSATDNLSIEVA 300


>gb|ALD89138.1| RNA-dependent RNA polymerase [Sclerotinia sclerotiorum ourmia-like
           virus 1 RNA 1]
          Length = 686

 Score =  101 bits (252), Expect = 5e-20
 Identities = 68/199 (34%), Positives = 98/199 (49%), Gaps = 4/199 (2%)
 Frame = -1

Query: 585 SLKKLLPNPCHCITHD-IEGKTLRLLDSDPIELPEDYLDHVSKVTRKIFQKAQFKNRKTY 409
           S+KKLLP+ C C+    +E    RL    P  LP  Y++   K+ +++F     +N   +
Sbjct: 88  SIKKLLPDACECMQGSMLEDLKTRLTRPAPT-LPSGYVNFCKKIVKELFPNGWDRN---W 143

Query: 408 EDYVRSATLSLGACAENSRRKGGNKGLSLWNREEWFELHFDEDYFTSSVSVLEGRPLVRY 229
           E    + + SLG+C   SR+ GG       +          +D++   + +  G      
Sbjct: 144 ETATANFSPSLGSCVNFSRKSGGQLAALATD---------GQDHWRERIKMPHGSLKGEL 194

Query: 228 NLVVDSGKARGITMNTGNHQVLRPLHKKLYDVISGERWLLRGDATADRF---CFDGRDGG 58
            LV  SGK R +T    +   LRPLH  +YD IS   WLLRGD TA++     F G    
Sbjct: 195 LLVNSSGKPRPLTRFESDSSYLRPLHGLIYDQISKNPWLLRGDVTAEKLKNAGFSGSSET 254

Query: 57  LFVSGDYTSATDNLPIEVA 1
             +SGDY SA+DNLPIE+A
Sbjct: 255 SLISGDYVSASDNLPIEIA 273


>gb|ALM62250.1| RNA-dependent RNA polymerase, partial [Soybean leaf-associated
           ourmiavirus 2]
          Length = 461

 Score = 99.8 bits (247), Expect = 1e-19
 Identities = 73/200 (36%), Positives = 94/200 (47%), Gaps = 5/200 (2%)
 Frame = -1

Query: 585 SLKKLLPNPCHCITHDIEGKTLRLLDSDPIELPEDYLDHVSKVTRKIFQKAQFKNRKTYE 406
           S+KKLLP  C C+ H +       L   P  LP  Y+  V +++ +IF          + 
Sbjct: 90  SIKKLLPESCKCLKHSMLADLRSRLSRPPPSLPPGYIQFVREISSEIFTNGW---DYAWS 146

Query: 405 DYVRSATLSLGACAENSRRKGGNKGLSLWNREEWFELHFDEDYFTSSVSVLEGRPLVRYN 226
             V+S + SLG+C   SR+ GG     L       +L + E         LEG  L    
Sbjct: 147 SKVQSFSPSLGSCIGTSRKLGGQ----LATLATAGQLAWQESLVKPQPGSLEGELL---- 198

Query: 225 LVVDSGKARGITMNTGNHQVLRPLHKKLYDVISGERWLLRGDATADRFCFDGRDGGL--- 55
           LV  SGK R +T        LRPLH  LYD +S   WLLRGD +A++    G D G    
Sbjct: 199 LVNSSGKPRALTRFGAEAASLRPLHGLLYDTLSKLPWLLRGDVSAEKLGKAGFDYGKSSE 258

Query: 54  --FVSGDYTSATDNLPIEVA 1
               SGDY SA+DNL IEVA
Sbjct: 259 EPLTSGDYKSASDNLSIEVA 278


>emb|SBQ28480.1| RNA dependent RNA polymerase [Magnaporthe oryzae ourmia-like virus]
          Length = 605

 Score = 89.7 bits (221), Expect = 5e-16
 Identities = 72/219 (32%), Positives = 108/219 (49%), Gaps = 7/219 (3%)
 Frame = -1

Query: 636 PFPARKRDILTVASCLVSLKKLLPNPC-HCITHDIEGKTLRLLDSDPIELPEDYLDHVSK 460
           P PA  R  L++A  L S  K LP+    C  +      +R +    ++ P+ YL  V K
Sbjct: 78  PLPAVDR--LSIAGSLFSFSKTLPSSDPDCDAY------VRHMSVPGVKTPDGYLRFVRK 129

Query: 459 VTRKIFQKAQFKN-RKTYEDYVRSATLSLGACAENSRRKGGNKGLSLWNREEWFELHFDE 283
           +  + F     K  R TY     +++ +LG+    S+ KGG +          ++L    
Sbjct: 130 LIMREFPVGWDKGWRSTYLGTTPTSSSALGS----SKGKGGAR----------YQLRGSR 175

Query: 282 DYFTSSVSVLEGR----PLVRYNLVVDSGKARGITMNTGNHQVLRPLHKKLYDVISGERW 115
            +F  S   LE      P+ +  +    GK+R +T +     VL PLH  +Y+ +S + W
Sbjct: 176 QWFLKSCMGLERELLLDPVRKVGIARCDGKSRRVTQSPAESVVLSPLHTLIYNHLSRKDW 235

Query: 114 LLRGDATADRFC-FDGRDGGLFVSGDYTSATDNLPIEVA 1
           LLRG+AT D+F  F  +DG +FVSGDY SA+DNL IE A
Sbjct: 236 LLRGEATPDKFADFCQKDGEVFVSGDYESASDNLSIEAA 274


>gb|ALD89131.1| RNA-dependent RNA polymerase, partial [Rhizoctonia solani
           ourmia-like virus 1 RNA 1]
          Length = 700

 Score = 77.0 bits (188), Expect = 9e-12
 Identities = 68/209 (32%), Positives = 95/209 (45%), Gaps = 8/209 (3%)
 Frame = -1

Query: 603 VASCLVSLKKLLPNPCHCITHDIEGKTLRLLDSDPIELPEDYLDHVSKVTRKIFQKAQFK 424
           V+  L  L+K+LP+    +    E    R+    P  LP  YL HV +   ++F    + 
Sbjct: 103 VSGGLFLLRKVLPS----LPSPWEEHAGRVCSPGPT-LPVGYLSHVRRTVHRLFP---YG 154

Query: 423 NRKTYEDYVRSATLSLGACAENSRRKGGNKGLSLWNREEWFELHFDEDYFTSSVSVLEG- 247
             + Y D V        +C    R  GG        R  W  L  +   F + VS   G 
Sbjct: 155 WDREYYDAVHRFIPRSSSCLGFPRSVGGA-------RAAWRGLRAE---FRNLVSPSGGD 204

Query: 246 RPL------VRYNLVVDSGKARGITMNTGNHQVLRPLHKKLYDVISGERWLLRGDATADR 85
            PL       ++  V+++GK R +T+   +  +L PLHK +Y  +S   WLLRG A    
Sbjct: 205 SPLPVDEFPAKFMNVLENGKCRSVTVGGADQVLLGPLHKTIYGTLSRNEWLLRGAAKPSA 264

Query: 84  FC-FDGRDGGLFVSGDYTSATDNLPIEVA 1
           F  F    G +FVSGDY SATDNL +EVA
Sbjct: 265 FSGFSQCPGEVFVSGDYESATDNLSLEVA 293


>ref|YP_009182165.1| RNA dependent RNA polymerase [Botrytis ourmia-like virus]
 emb|CEZ26310.1| RNA dependent RNA polymerase [Botrytis ourmia-like virus]
          Length = 722

 Score = 59.3 bits (142), Expect = 6e-06
 Identities = 34/81 (41%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
 Frame = -1

Query: 237 VRYNLVVDSGKARGITMNTGN-HQVLRPLHKKLYDVISGERWLLRGDATADRF---CFDG 70
           VR       GK R +TM   N  +VLRP+H  LYD ++G  WL+RGD TA  F     D 
Sbjct: 185 VRLGTAKTKGKIRVVTMQGANTKKVLRPVHSALYDYLAGFGWLVRGDVTAADFEAIIEDK 244

Query: 69  RDGGLFVSGDYTSATDNLPIE 7
           +    F+SGDY  AT+++ I+
Sbjct: 245 QGDEKFISGDYEQATNHINID 265