BLASTX nr result

ID: Ophiopogon24_contig00038116 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00038116
         (632 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK56417.1| uncharacterized protein A4U43_C10F8400 [Asparagus...   134   4e-37
ref|YP_008992401.1| hypothetical protein Salmi_Mp135 (mitochondr...    82   1e-16

>gb|ONK56417.1| uncharacterized protein A4U43_C10F8400 [Asparagus officinalis]
          Length = 114

 Score =  134 bits (338), Expect = 4e-37
 Identities = 64/65 (98%), Positives = 65/65 (100%)
 Frame = -1

Query: 233 PGASGMRFGMGVQTDSCAQALGELRDLEPLLDPHFRWRSLKDGLEFSGGARRKRGETHLI 54
           PGASGMRFGMGVQTDSCAQALGELRDLEPLLDPHFRWRSLKDGLEFSGGARRKRGETHLI
Sbjct: 4   PGASGMRFGMGVQTDSCAQALGELRDLEPLLDPHFRWRSLKDGLEFSGGARRKRGETHLI 63

Query: 53  KVIAR 39
           KVIA+
Sbjct: 64  KVIAQ 68


>ref|YP_008992401.1| hypothetical protein Salmi_Mp135 (mitochondrion) [Salvia
           miltiorrhiza]
 gb|AGU16662.1| hypothetical protein Salmi_Mp135 (mitochondrion) [Salvia
           miltiorrhiza]
          Length = 122

 Score = 82.4 bits (202), Expect = 1e-16
 Identities = 58/114 (50%), Positives = 71/114 (62%), Gaps = 8/114 (7%)
 Frame = -3

Query: 540 R*KKRRDVRNDYHNQAAP---RAPYFALTDVCLRLATELTLWPCRPPP---AQKLS*ALE 379
           R +KRRD RNDYH +AAP   + P  +     LRL+TE        PP   A++L  AL 
Sbjct: 14  REEKRRDARNDYHKKAAPYLRKWPVTSFVPSWLRLSTEQH----GAPPLAEAKRLKSALR 69

Query: 378 KRAKKRCVGLSVQ--VTSGREGDSTYNSLPVLTAAVSYQSSSTTAVSFLIARRI 223
             A    VGLSVQ   +SGREG  TY S+PVLT A+SYQSSSTTA+S+  ARR+
Sbjct: 70  NLAS---VGLSVQQSTSSGREGYRTYKSIPVLTEALSYQSSSTTALSYSPARRV 120


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