BLASTX nr result
ID: Ophiopogon24_contig00037947
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00037947
(446 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_009242008.1| NADH dehydrogenase subunit 4 (mitochondrion)... 174 4e-48
ref|YP_009242020.1| NADH dehydrogenase subunit 4 (mitochondrion)... 172 1e-47
gb|PRQ15630.1| hypothetical protein RchiOBHm_MTg0498661 (mitocho... 69 2e-12
ref|XP_022889136.1| uncharacterized protein LOC111404577 [Olea e... 68 2e-10
gb|PKI40737.1| hypothetical protein CRG98_038875 [Punica granatum] 61 4e-09
emb|CAN71466.1| hypothetical protein VITISV_038987 [Vitis vinifera] 47 1e-08
gb|KJB09792.1| hypothetical protein B456_001G166500 [Gossypium r... 55 2e-08
gb|PNT71386.1| hypothetical protein BRADI_2g26903v3 [Brachypodiu... 56 5e-08
gb|PIN20505.1| hypothetical protein CDL12_06810 [Handroanthus im... 53 2e-06
dbj|GAV91906.1| LOW QUALITY PROTEIN: Oxidored_q1 domain-containi... 54 2e-06
>ref|YP_009242008.1| NADH dehydrogenase subunit 4 (mitochondrion) [Oryza minuta]
gb|AMQ23370.1| NADH dehydrogenase subunit 4 (mitochondrion) [Oryza minuta]
Length = 2992
Score = 174 bits (441), Expect(2) = 4e-48
Identities = 89/99 (89%), Positives = 89/99 (89%)
Frame = -1
Query: 440 RRFPAHYISRRRRKLEELPFIRFAGVAHST*LEVRGPVLPA*PFAPRDRRTESAF*TTRQ 261
RR HYISRRRRKLEELPFIRFAGVAHST LEVRGPVLPA PFAPRDR TESAF TTRQ
Sbjct: 1366 RRNADHYISRRRRKLEELPFIRFAGVAHSTYLEVRGPVLPALPFAPRDRTTESAFYTTRQ 1425
Query: 260 KGRGLCICMTSADLTLPTPGANPLAVLPSRRRTRARVEP 144
KGRGLCICMT ADLTLPTPGANPLAVLP RRRT ARVEP
Sbjct: 1426 KGRGLCICMTPADLTLPTPGANPLAVLPPRRRTGARVEP 1464
Score = 45.1 bits (105), Expect(2) = 4e-48
Identities = 27/46 (58%), Positives = 29/46 (63%)
Frame = -2
Query: 139 ISGVTAVERNKKNITTVA*HRGLRYGELGQNMDTRRARHAQSYPIR 2
ISGVTA E I + H Y +GQNMDTRRAR AQSYPIR
Sbjct: 1466 ISGVTAAE----GIKILRPHIIGAYAYVGQNMDTRRARRAQSYPIR 1507
>ref|YP_009242020.1| NADH dehydrogenase subunit 4 (mitochondrion) [Oryza minuta]
gb|AMQ23374.1| NADH dehydrogenase subunit 4 (mitochondrion) [Oryza minuta]
Length = 2992
Score = 172 bits (437), Expect(2) = 1e-47
Identities = 87/94 (92%), Positives = 87/94 (92%)
Frame = -1
Query: 425 HYISRRRRKLEELPFIRFAGVAHST*LEVRGPVLPA*PFAPRDRRTESAF*TTRQKGRGL 246
HYISRRRRKLEELPFIRFAGVAHST LEVRGPVLPA PFAPRDR TESAF TTRQKGRGL
Sbjct: 1371 HYISRRRRKLEELPFIRFAGVAHSTLLEVRGPVLPAYPFAPRDRSTESAFLTTRQKGRGL 1430
Query: 245 CICMTSADLTLPTPGANPLAVLPSRRRTRARVEP 144
CICMT ADLTLPTPGANPLAVLP RRRT ARVEP
Sbjct: 1431 CICMTPADLTLPTPGANPLAVLPPRRRTGARVEP 1464
Score = 45.1 bits (105), Expect(2) = 1e-47
Identities = 27/46 (58%), Positives = 29/46 (63%)
Frame = -2
Query: 139 ISGVTAVERNKKNITTVA*HRGLRYGELGQNMDTRRARHAQSYPIR 2
ISGVTA E I + H Y +GQNMDTRRAR AQSYPIR
Sbjct: 1466 ISGVTAAE----GIKILRPHYIGAYALVGQNMDTRRARRAQSYPIR 1507
>gb|PRQ15630.1| hypothetical protein RchiOBHm_MTg0498661 (mitochondrion) [Rosa
chinensis]
Length = 78
Score = 68.6 bits (166), Expect = 2e-12
Identities = 41/59 (69%), Positives = 43/59 (72%), Gaps = 2/59 (3%)
Frame = +1
Query: 145 GSTRALVLRRDGRTARGLAPGVGRVKSAEVMQIHRPLPFCRV--V*KALSVLRSLGAKG 315
GSTRA VLRR GRT RGLAPGV RVKSA V QIHRPLPF + S LRSLGA+G
Sbjct: 20 GSTRASVLRRGGRTNRGLAPGVDRVKSAGVTQIHRPLPFPDEWGGLEGASDLRSLGARG 78
>ref|XP_022889136.1| uncharacterized protein LOC111404577 [Olea europaea var.
sylvestris]
Length = 546
Score = 68.2 bits (165), Expect(2) = 2e-10
Identities = 34/39 (87%), Positives = 36/39 (92%)
Frame = +1
Query: 145 GSTRALVLRRDGRTARGLAPGVGRVKSAEVMQIHRPLPF 261
GSTRA VLRR GRTARG+APGV RVKSAEVMQI+RPLPF
Sbjct: 505 GSTRAPVLRRGGRTARGVAPGVDRVKSAEVMQINRPLPF 543
Score = 25.0 bits (53), Expect(2) = 2e-10
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +3
Query: 108 LLRSTAVTPEIR 143
LLRSTAVTPEI+
Sbjct: 493 LLRSTAVTPEIK 504
>gb|PKI40737.1| hypothetical protein CRG98_038875 [Punica granatum]
Length = 127
Score = 61.2 bits (147), Expect = 4e-09
Identities = 36/73 (49%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Frame = +2
Query: 2 SDRIGLCVPGPSGVHILAEFPVA*APMLRDRSNIFFVTFHRCYA-----RNPTVPHELSF 166
SDRIGLCVPGPSGV FP LR + + T CY + V HEL F
Sbjct: 10 SDRIGLCVPGPSGVIFWPSFPY-----LRP---LCYATVIFCYVPPLLRQKYKVSHELPF 61
Query: 167 CGVMAGPLGDWLR 205
CGV+AGP+GDW R
Sbjct: 62 CGVVAGPIGDWPR 74
Score = 60.8 bits (146), Expect = 5e-09
Identities = 42/95 (44%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Frame = +1
Query: 106 FCYVPPLLRQKSDGSTRALVLRRDGRTARGLAPGVGRVKSAEVMQIHRPLPFCRVV*--- 276
FCYVPPLLRQK ++ LPFC VV
Sbjct: 42 FCYVPPLLRQK--------------------------------YKVSHELPFCGVVAGPI 69
Query: 277 -----KALSVLRSLGAKG*AGSTGPLTSSYVLCAT 366
KALS LRSLGAKG AGS GPLTSSYVLC +
Sbjct: 70 GDWPRKALSDLRSLGAKGKAGSMGPLTSSYVLCGS 104
>emb|CAN71466.1| hypothetical protein VITISV_038987 [Vitis vinifera]
Length = 325
Score = 46.6 bits (109), Expect(2) = 1e-08
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -3
Query: 357 QHIAGSQRARTTCLTLRSEGP 295
QHIAGSQRARTTCLTLRSEGP
Sbjct: 305 QHIAGSQRARTTCLTLRSEGP 325
Score = 40.0 bits (92), Expect(2) = 1e-08
Identities = 19/22 (86%), Positives = 19/22 (86%)
Frame = -1
Query: 425 HYISRRRRKLEELPFIRFAGVA 360
HYISR RRKL ELPFIRFAG A
Sbjct: 283 HYISRWRRKLFELPFIRFAGAA 304
>gb|KJB09792.1| hypothetical protein B456_001G166500 [Gossypium raimondii]
Length = 61
Score = 55.1 bits (131), Expect(3) = 2e-08
Identities = 26/31 (83%), Positives = 27/31 (87%)
Frame = -1
Query: 236 MTSADLTLPTPGANPLAVLPSRRRTRARVEP 144
MT AD TL TPGANPL+VLP RRRTRARVEP
Sbjct: 1 MTPADFTLSTPGANPLSVLPPRRRTRARVEP 31
Score = 26.2 bits (56), Expect(3) = 2e-08
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = -3
Query: 114 VTKKILLRSRNIGAYATGNSAKI 46
V + +LRSRNI A T NSAKI
Sbjct: 39 VERNKILRSRNIRAGGTVNSAKI 61
Score = 24.6 bits (52), Expect(3) = 2e-08
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = -2
Query: 139 ISGVTAVERNK 107
ISGVTAVERNK
Sbjct: 33 ISGVTAVERNK 43
>gb|PNT71386.1| hypothetical protein BRADI_2g26903v3 [Brachypodium distachyon]
Length = 45
Score = 56.2 bits (134), Expect = 5e-08
Identities = 27/31 (87%), Positives = 27/31 (87%)
Frame = -1
Query: 236 MTSADLTLPTPGANPLAVLPSRRRTRARVEP 144
MT ADLTLPTPGANPLAVLP RRT ARVEP
Sbjct: 1 MTPADLTLPTPGANPLAVLPPHRRTGARVEP 31
>gb|PIN20505.1| hypothetical protein CDL12_06810 [Handroanthus impetiginosus]
Length = 83
Score = 53.1 bits (126), Expect = 2e-06
Identities = 26/31 (83%), Positives = 26/31 (83%)
Frame = -1
Query: 236 MTSADLTLPTPGANPLAVLPSRRRTRARVEP 144
MTSAD TL TPGA PLAVLP RRRT ARVEP
Sbjct: 1 MTSADFTLSTPGATPLAVLPPRRRTGARVEP 31
>dbj|GAV91906.1| LOW QUALITY PROTEIN: Oxidored_q1 domain-containing protein, partial
[Cephalotus follicularis]
Length = 460
Score = 53.9 bits (128), Expect(2) = 2e-06
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = -1
Query: 233 TSADLTLPTPGANPLAVLPSRRRTRARVEP 144
T ADLTL TPGANPL+VLP+RRRTRARV+P
Sbjct: 230 TPADLTLSTPGANPLSVLPARRRTRARVKP 259
Score = 25.0 bits (53), Expect(2) = 2e-06
Identities = 13/19 (68%), Positives = 14/19 (73%), Gaps = 2/19 (10%)
Frame = -2
Query: 286 KAPSK--QLGRREGAYVFA 236
KAPSK +REGAYVFA
Sbjct: 210 KAPSKPPHSSKREGAYVFA 228