BLASTX nr result
ID: Ophiopogon24_contig00037552
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00037552
(408 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|OMP10365.1| DNA-directed RNA polymerase, subunit 2, partial [... 60 4e-09
gb|OMP13976.1| DNA-directed RNA polymerase, subunit 2 [Corchorus... 60 8e-09
gb|PHT31608.1| DNA-directed RNA polymerase subunit beta [Capsicu... 60 1e-08
gb|OMP10689.1| DNA-directed RNA polymerase, subunit 2 [Corchorus... 60 1e-08
ref|YP_004927548.1| orf128a (mitochondrion) [Brassica carinata] ... 60 1e-08
gb|PKA49977.1| DNA-directed RNA polymerase subunit beta [Apostas... 60 1e-08
gb|OMP10354.1| hypothetical protein CCACVL1_00984, partial [Corc... 60 2e-08
gb|OMP07619.1| hypothetical protein CCACVL1_01270, partial [Corc... 60 2e-08
gb|OMP10895.1| hypothetical protein CCACVL1_00754, partial [Corc... 60 2e-08
gb|PKU63211.1| DNA-directed RNA polymerase subunit beta [Dendrob... 60 3e-08
gb|OMP10501.1| hypothetical protein CCACVL1_00926, partial [Corc... 60 3e-08
gb|PHU00181.1| DNA-directed RNA polymerase subunit beta [Capsicu... 60 3e-08
gb|EEC75033.1| hypothetical protein OsI_11126 [Oryza sativa Indi... 61 4e-08
ref|YP_009379329.1| RNA polymerase beta subunit (plastid) [Acer ... 61 4e-08
gb|AEZ03728.1| hypothetical protein (mitochondrion) [Oryza sativ... 61 4e-08
ref|YP_009467056.1| RNA polymerase beta subunit (chloroplast) [S... 61 4e-08
ref|YP_009366914.1| RNA polymerase beta subunit (plastid) [Illic... 61 4e-08
ref|YP_009366588.1| RNA polymerase beta subunit (plastid) [Illic... 61 4e-08
ref|YP_009365444.1| RNA polymerase beta subunit (plastid) [Illic... 61 4e-08
ref|YP_009378406.1| RNA polymerase beta subunit (chloroplast) [S... 61 4e-08
>gb|OMP10365.1| DNA-directed RNA polymerase, subunit 2, partial [Corchorus
capsularis]
Length = 81
Score = 59.7 bits (143), Expect = 4e-09
Identities = 29/34 (85%), Positives = 31/34 (91%)
Frame = -1
Query: 369 YPFQYFSIGASLIPFIELNDANRALMSYDMQLQA 268
+PFQYFSIGASLIPFIE NDANRALMS +MQ QA
Sbjct: 30 FPFQYFSIGASLIPFIEHNDANRALMSSNMQRQA 63
>gb|OMP13976.1| DNA-directed RNA polymerase, subunit 2 [Corchorus olitorius]
Length = 115
Score = 59.7 bits (143), Expect = 8e-09
Identities = 29/34 (85%), Positives = 31/34 (91%)
Frame = -1
Query: 369 YPFQYFSIGASLIPFIELNDANRALMSYDMQLQA 268
+PFQYFSIGASLIPFIE NDANRALMS +MQ QA
Sbjct: 42 FPFQYFSIGASLIPFIEHNDANRALMSSNMQRQA 75
>gb|PHT31608.1| DNA-directed RNA polymerase subunit beta [Capsicum baccatum]
Length = 124
Score = 59.7 bits (143), Expect = 1e-08
Identities = 29/34 (85%), Positives = 31/34 (91%)
Frame = -1
Query: 369 YPFQYFSIGASLIPFIELNDANRALMSYDMQLQA 268
+PFQYFSIGASLIPFIE NDANRALMS +MQ QA
Sbjct: 54 FPFQYFSIGASLIPFIEHNDANRALMSSNMQRQA 87
>gb|OMP10689.1| DNA-directed RNA polymerase, subunit 2 [Corchorus capsularis]
Length = 127
Score = 59.7 bits (143), Expect = 1e-08
Identities = 29/34 (85%), Positives = 31/34 (91%)
Frame = -1
Query: 369 YPFQYFSIGASLIPFIELNDANRALMSYDMQLQA 268
+PFQYFSIGASLIPFIE NDANRALMS +MQ QA
Sbjct: 54 FPFQYFSIGASLIPFIEHNDANRALMSSNMQRQA 87
>ref|YP_004927548.1| orf128a (mitochondrion) [Brassica carinata]
gb|AEH43563.1| orf128a (mitochondrion) [Brassica carinata]
Length = 128
Score = 59.7 bits (143), Expect = 1e-08
Identities = 29/34 (85%), Positives = 31/34 (91%)
Frame = -1
Query: 369 YPFQYFSIGASLIPFIELNDANRALMSYDMQLQA 268
+PFQYFSIGASLIPFIE NDANRALMS +MQ QA
Sbjct: 67 FPFQYFSIGASLIPFIEHNDANRALMSSNMQRQA 100
>gb|PKA49977.1| DNA-directed RNA polymerase subunit beta [Apostasia shenzhenica]
Length = 142
Score = 59.7 bits (143), Expect = 1e-08
Identities = 29/34 (85%), Positives = 31/34 (91%)
Frame = -1
Query: 369 YPFQYFSIGASLIPFIELNDANRALMSYDMQLQA 268
+PFQYFSIGASLIPFIE NDANRALMS +MQ QA
Sbjct: 42 FPFQYFSIGASLIPFIEHNDANRALMSSNMQRQA 75
>gb|OMP10354.1| hypothetical protein CCACVL1_00984, partial [Corchorus capsularis]
Length = 153
Score = 59.7 bits (143), Expect = 2e-08
Identities = 29/34 (85%), Positives = 31/34 (91%)
Frame = -1
Query: 369 YPFQYFSIGASLIPFIELNDANRALMSYDMQLQA 268
+PFQYFSIGASLIPFIE NDANRALMS +MQ QA
Sbjct: 42 FPFQYFSIGASLIPFIEHNDANRALMSSNMQRQA 75
>gb|OMP07619.1| hypothetical protein CCACVL1_01270, partial [Corchorus capsularis]
Length = 160
Score = 59.7 bits (143), Expect = 2e-08
Identities = 29/34 (85%), Positives = 31/34 (91%)
Frame = -1
Query: 369 YPFQYFSIGASLIPFIELNDANRALMSYDMQLQA 268
+PFQYFSIGASLIPFIE NDANRALMS +MQ QA
Sbjct: 7 FPFQYFSIGASLIPFIEHNDANRALMSSNMQRQA 40
>gb|OMP10895.1| hypothetical protein CCACVL1_00754, partial [Corchorus capsularis]
Length = 165
Score = 59.7 bits (143), Expect = 2e-08
Identities = 29/34 (85%), Positives = 31/34 (91%)
Frame = -1
Query: 369 YPFQYFSIGASLIPFIELNDANRALMSYDMQLQA 268
+PFQYFSIGASLIPFIE NDANRALMS +MQ QA
Sbjct: 54 FPFQYFSIGASLIPFIEHNDANRALMSSNMQRQA 87
>gb|PKU63211.1| DNA-directed RNA polymerase subunit beta [Dendrobium catenatum]
Length = 181
Score = 59.7 bits (143), Expect = 3e-08
Identities = 29/34 (85%), Positives = 31/34 (91%)
Frame = -1
Query: 369 YPFQYFSIGASLIPFIELNDANRALMSYDMQLQA 268
+PFQYFSIGASLIPFIE NDANRALMS +MQ QA
Sbjct: 13 FPFQYFSIGASLIPFIEHNDANRALMSSNMQRQA 46
>gb|OMP10501.1| hypothetical protein CCACVL1_00926, partial [Corchorus capsularis]
Length = 183
Score = 59.7 bits (143), Expect = 3e-08
Identities = 29/34 (85%), Positives = 31/34 (91%)
Frame = -1
Query: 369 YPFQYFSIGASLIPFIELNDANRALMSYDMQLQA 268
+PFQYFSIGASLIPFIE NDANRALMS +MQ QA
Sbjct: 30 FPFQYFSIGASLIPFIEHNDANRALMSSNMQRQA 63
>gb|PHU00181.1| DNA-directed RNA polymerase subunit beta [Capsicum chinense]
Length = 191
Score = 59.7 bits (143), Expect = 3e-08
Identities = 29/34 (85%), Positives = 31/34 (91%)
Frame = -1
Query: 369 YPFQYFSIGASLIPFIELNDANRALMSYDMQLQA 268
+PFQYFSIGASLIPFIE NDANRALMS +MQ QA
Sbjct: 129 FPFQYFSIGASLIPFIEHNDANRALMSSNMQRQA 162
>gb|EEC75033.1| hypothetical protein OsI_11126 [Oryza sativa Indica Group]
Length = 870
Score = 61.2 bits (147), Expect = 4e-08
Identities = 30/48 (62%), Positives = 36/48 (75%)
Frame = -1
Query: 369 YPFQYFSIGASLIPFIELNDANRALMSYDMQLQAGGRLHLSNLNHGRL 226
+PFQYFSIG SLIPFIE NDANRALMS +MQ QA R+ + G++
Sbjct: 343 FPFQYFSIGGSLIPFIEHNDANRALMSSNMQRQADSRVSVIAEREGKI 390
>ref|YP_009379329.1| RNA polymerase beta subunit (plastid) [Acer palmatum]
gb|ARQ30029.1| RNA polymerase beta subunit (plastid) [Acer palmatum]
Length = 1015
Score = 61.2 bits (147), Expect = 4e-08
Identities = 30/34 (88%), Positives = 31/34 (91%)
Frame = -1
Query: 369 YPFQYFSIGASLIPFIELNDANRALMSYDMQLQA 268
YPFQYFSIGASLIPFIE NDANRALMS +MQ QA
Sbjct: 519 YPFQYFSIGASLIPFIEHNDANRALMSSNMQRQA 552
>gb|AEZ03728.1| hypothetical protein (mitochondrion) [Oryza sativa Indica Group]
Length = 1054
Score = 61.2 bits (147), Expect = 4e-08
Identities = 30/48 (62%), Positives = 36/48 (75%)
Frame = -1
Query: 369 YPFQYFSIGASLIPFIELNDANRALMSYDMQLQAGGRLHLSNLNHGRL 226
+PFQYFSIG SLIPFIE NDANRALMS +MQ QA R+ + G++
Sbjct: 527 FPFQYFSIGGSLIPFIEHNDANRALMSSNMQRQADSRVSVIAEREGKI 574
>ref|YP_009467056.1| RNA polymerase beta subunit (chloroplast) [Schisandra sphenanthera]
gb|ARB02603.1| RNA polymerase beta subunit (chloroplast) [Schisandra sphenanthera]
Length = 1062
Score = 61.2 bits (147), Expect = 4e-08
Identities = 30/34 (88%), Positives = 31/34 (91%)
Frame = -1
Query: 369 YPFQYFSIGASLIPFIELNDANRALMSYDMQLQA 268
YPFQYFSIGASLIPFIE NDANRALMS +MQ QA
Sbjct: 511 YPFQYFSIGASLIPFIEHNDANRALMSSNMQRQA 544
>ref|YP_009366914.1| RNA polymerase beta subunit (plastid) [Illicium anisatum]
gb|ARJ63193.1| RNA polymerase beta subunit (plastid) [Illicium anisatum]
Length = 1062
Score = 61.2 bits (147), Expect = 4e-08
Identities = 30/34 (88%), Positives = 31/34 (91%)
Frame = -1
Query: 369 YPFQYFSIGASLIPFIELNDANRALMSYDMQLQA 268
YPFQYFSIGASLIPFIE NDANRALMS +MQ QA
Sbjct: 511 YPFQYFSIGASLIPFIEHNDANRALMSSNMQRQA 544
>ref|YP_009366588.1| RNA polymerase beta subunit (plastid) [Illicium henryi]
gb|ARJ62439.1| RNA polymerase beta subunit (plastid) [Illicium henryi]
Length = 1062
Score = 61.2 bits (147), Expect = 4e-08
Identities = 30/34 (88%), Positives = 31/34 (91%)
Frame = -1
Query: 369 YPFQYFSIGASLIPFIELNDANRALMSYDMQLQA 268
YPFQYFSIGASLIPFIE NDANRALMS +MQ QA
Sbjct: 511 YPFQYFSIGASLIPFIEHNDANRALMSSNMQRQA 544
>ref|YP_009365444.1| RNA polymerase beta subunit (plastid) [Illicium floridanum]
gb|ARJ60915.1| RNA polymerase beta subunit (plastid) [Illicium floridanum]
Length = 1062
Score = 61.2 bits (147), Expect = 4e-08
Identities = 30/34 (88%), Positives = 31/34 (91%)
Frame = -1
Query: 369 YPFQYFSIGASLIPFIELNDANRALMSYDMQLQA 268
YPFQYFSIGASLIPFIE NDANRALMS +MQ QA
Sbjct: 511 YPFQYFSIGASLIPFIEHNDANRALMSSNMQRQA 544
>ref|YP_009378406.1| RNA polymerase beta subunit (chloroplast) [Schisandra chinensis]
gb|ANP25593.1| RNA polymerase beta subunit (chloroplast) [Schisandra chinensis]
gb|ARH53461.1| RNA polymerase beta subunit (chloroplast) [Schisandra chinensis]
Length = 1062
Score = 61.2 bits (147), Expect = 4e-08
Identities = 30/34 (88%), Positives = 31/34 (91%)
Frame = -1
Query: 369 YPFQYFSIGASLIPFIELNDANRALMSYDMQLQA 268
YPFQYFSIGASLIPFIE NDANRALMS +MQ QA
Sbjct: 511 YPFQYFSIGASLIPFIEHNDANRALMSSNMQRQA 544