BLASTX nr result

ID: Ophiopogon24_contig00037085 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00037085
         (431 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK61463.1| uncharacterized protein A4U43_C08F30180 [Asparagu...    56   3e-06
ref|XP_020244761.1| pentatricopeptide repeat-containing protein ...    56   3e-06

>gb|ONK61463.1| uncharacterized protein A4U43_C08F30180 [Asparagus officinalis]
          Length = 913

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 34/89 (38%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
 Frame = -2

Query: 301 NIFIAKNLLRGKSIFSEEF---VLSQKNIFFVGLRNEWRQESNAASILHFFANHLFYMMQ 131
           N+ I  N   G S F+ E    +  + +I +  + N +    +    L      LFY MQ
Sbjct: 703 NVLIDMNARSGSSSFAREIFDQLELKDSISWSVMINAYGINGDGGGALR-----LFYTMQ 757

Query: 130 EVGVQPDDVTFVSTLSACSHSGLVKQVAN 44
           E G++PDD+TFVS LSAC HSGLV +  N
Sbjct: 758 ETGIKPDDITFVSILSACGHSGLVDEGRN 786


>ref|XP_020244761.1| pentatricopeptide repeat-containing protein At5g27110-like
           [Asparagus officinalis]
          Length = 954

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 34/89 (38%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
 Frame = -2

Query: 301 NIFIAKNLLRGKSIFSEEF---VLSQKNIFFVGLRNEWRQESNAASILHFFANHLFYMMQ 131
           N+ I  N   G S F+ E    +  + +I +  + N +    +    L      LFY MQ
Sbjct: 744 NVLIDMNARSGSSSFAREIFDQLELKDSISWSVMINAYGINGDGGGALR-----LFYTMQ 798

Query: 130 EVGVQPDDVTFVSTLSACSHSGLVKQVAN 44
           E G++PDD+TFVS LSAC HSGLV +  N
Sbjct: 799 ETGIKPDDITFVSILSACGHSGLVDEGRN 827


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