BLASTX nr result

ID: Ophiopogon24_contig00037030 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00037030
         (615 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEF26587.1| conserved hypothetical protein [Ricinus communis]       42   8e-06

>gb|EEF26587.1| conserved hypothetical protein [Ricinus communis]
          Length = 51

 Score = 42.4 bits (98), Expect(2) = 8e-06
 Identities = 23/34 (67%), Positives = 23/34 (67%), Gaps = 9/34 (26%)
 Frame = +1

Query: 355 TTEIFDLAPTGNPP---------GAEDNERETKS 429
           TTEIFDLAP GN P         GAEDNERETKS
Sbjct: 18  TTEIFDLAPKGNNPPGPSPTYTRGAEDNERETKS 51



 Score = 35.4 bits (80), Expect(2) = 8e-06
 Identities = 14/16 (87%), Positives = 15/16 (93%)
 Frame = +3

Query: 303 LGLPKSNCNRSLSTTH 350
           +GLPK NCNRSLSTTH
Sbjct: 1   MGLPKENCNRSLSTTH 16