BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00037015
         (463 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_009334397.1| RNA polymerase beta subunit (chloroplast) [A...   292   6e-90
gb|AEX94351.1| RNA polymerase beta subunit (chloroplast) [Ornith...   292   6e-90
ref|WP_082924809.1| hypothetical protein [Paenarthrobacter nicot...   280   7e-90
gb|ADV78616.1| RNA polymerase beta subunit, partial (chloroplast...   272   9e-90
gb|ANO44662.1| RNA polymerase beta subunit (chloroplast) [Bomare...   290   2e-89
ref|YP_009092759.1| RNA polymerase beta subunit [Bomarea edulis]...   290   2e-89
gb|AEX94349.1| RNA polymerase beta subunit (chloroplast) [Drimia...   290   2e-89
gb|AEX94347.1| RNA polymerase beta subunit (chloroplast) [Phormi...   290   2e-89
gb|AFB18348.1| RNA polymerase beta subunit, partial (plastid) [P...   290   2e-89
gb|AFB18343.1| RNA polymerase beta subunit (plastid) [Lomandra l...   290   3e-89
ref|YP_009334736.1| RNA polymerase beta subunit (chloroplast) [C...   290   4e-89
ref|YP_009334482.1| RNA polymerase beta subunit (chloroplast) [A...   290   4e-89
sp|P08036.1|RPOB_SAPOF RecName: Full=DNA-directed RNA polymerase...   274   6e-89
gb|AEX94350.1| RNA polymerase beta subunit (chloroplast) [Ledebo...   289   6e-89
ref|YP_009327296.1| RNA polymerase beta subunit (chloroplast) [A...   289   8e-89
ref|YP_009335239.1| RNA polymerase beta subunit (chloroplast) [M...   289   8e-89
gb|AAZ03996.1| RNA polymerase beta chain, partial (chloroplast) ...   289   8e-89
ref|YP_009335750.1| RNA polymerase beta subunit (chloroplast) [Y...   289   8e-89
ref|YP_009335665.1| RNA polymerase beta subunit (chloroplast) [Y...   289   8e-89
ref|YP_009335580.1| RNA polymerase beta subunit (chloroplast) [Y...   289   8e-89

>ref|YP_009334397.1| RNA polymerase beta subunit (chloroplast) [Albuca kirkii]
 gb|AFB18321.1| RNA polymerase beta subunit (plastid) [Albuca kirkii]
 gb|APO11207.1| RNA polymerase beta subunit (chloroplast) [Albuca kirkii]
          Length = 1070

 Score =  292 bits (747), Expect = 6e-90
 Identities = 149/154 (96%), Positives = 150/154 (97%)
 Frame = +1

Query: 1    AATVGGEHDVEKKNVLVAYMPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTHVTSQ 180
            AATVGGE  + K NVLVAYMPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTHVTSQ
Sbjct: 642  AATVGGELALGK-NVLVAYMPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTHVTSQ 700

Query: 181  GPERITKEIPHLEAHLLRNLDRNGIVMLGSWIEAGDILVGKLTPQAANESSYAPEDRLLR 360
            GPERITKEIPHLEAHLLRNLDRNGIVMLGSWIEAGDILVGKLTPQAANESSYAPEDRLLR
Sbjct: 701  GPERITKEIPHLEAHLLRNLDRNGIVMLGSWIEAGDILVGKLTPQAANESSYAPEDRLLR 760

Query: 361  AILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKK 462
            AILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKK
Sbjct: 761  AILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKK 794


>gb|AEX94351.1| RNA polymerase beta subunit (chloroplast) [Ornithogalum tenuifolium]
          Length = 1070

 Score =  292 bits (747), Expect = 6e-90
 Identities = 149/154 (96%), Positives = 150/154 (97%)
 Frame = +1

Query: 1    AATVGGEHDVEKKNVLVAYMPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTHVTSQ 180
            AATVGGE  + K NVLVAYMPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTHVTSQ
Sbjct: 642  AATVGGELALGK-NVLVAYMPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTHVTSQ 700

Query: 181  GPERITKEIPHLEAHLLRNLDRNGIVMLGSWIEAGDILVGKLTPQAANESSYAPEDRLLR 360
            GPERITKEIPHLEAHLLRNLDRNGIVMLGSWIEAGDILVGKLTPQAANESSYAPEDRLLR
Sbjct: 701  GPERITKEIPHLEAHLLRNLDRNGIVMLGSWIEAGDILVGKLTPQAANESSYAPEDRLLR 760

Query: 361  AILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKK 462
            AILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKK
Sbjct: 761  AILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKK 794


>ref|WP_082924809.1| hypothetical protein [Paenarthrobacter nicotinovorans]
 dbj|GAT89896.1| DNA-directed RNA polymerase beta subunit, chloroplast
           [Paenarthrobacter nicotinovorans]
          Length = 527

 Score =  280 bits (716), Expect = 7e-90
 Identities = 140/154 (90%), Positives = 146/154 (94%)
 Frame = +1

Query: 1   AATVGGEHDVEKKNVLVAYMPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTHVTSQ 180
           AATVGGE  + K NVLVAY+PWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTHVTSQ
Sbjct: 99  AATVGGELALGK-NVLVAYLPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTHVTSQ 157

Query: 181 GPERITKEIPHLEAHLLRNLDRNGIVMLGSWIEAGDILVGKLTPQAANESSYAPEDRLLR 360
           GPERIT EIPHLEAHLLRNLD+NGIVMLGSW+EAGD+LVGKLTPQ A ESSYAPEDRLLR
Sbjct: 158 GPERITNEIPHLEAHLLRNLDKNGIVMLGSWVEAGDVLVGKLTPQTAKESSYAPEDRLLR 217

Query: 361 AILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKK 462
           AILGIQVST+KET LKLPIGGRGRVIDVRWIQKK
Sbjct: 218 AILGIQVSTSKETCLKLPIGGRGRVIDVRWIQKK 251


>gb|ADV78616.1| RNA polymerase beta subunit, partial (chloroplast) [Oncidium hybrid
           cultivar]
 gb|ADV78617.1| RNA polymerase beta subunit, partial (chloroplast) [Oncidium hybrid
           cultivar]
 gb|ADV78619.1| RNA polymerase beta subunit, partial (chloroplast) [Oncidium hybrid
           cultivar]
 gb|ADV78620.1| RNA polymerase beta subunit, partial (chloroplast) [Oncidium hybrid
           cultivar]
          Length = 300

 Score =  272 bits (696), Expect = 9e-90
 Identities = 136/153 (88%), Positives = 143/153 (93%)
 Frame = +1

Query: 4   ATVGGEHDVEKKNVLVAYMPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTHVTSQG 183
           AT GGE  + K NVLVAYMPWEGYNFEDAVLI+ERLVYEDIYTSFHIRKYEIQTHVTSQG
Sbjct: 64  ATAGGELALGK-NVLVAYMPWEGYNFEDAVLINERLVYEDIYTSFHIRKYEIQTHVTSQG 122

Query: 184 PERITKEIPHLEAHLLRNLDRNGIVMLGSWIEAGDILVGKLTPQAANESSYAPEDRLLRA 363
           PERITK+IPHLEAHLLRNLDRNGIVMLGSWIE GDILVGKLTPQ A+E SY PEDRLLRA
Sbjct: 123 PERITKDIPHLEAHLLRNLDRNGIVMLGSWIETGDILVGKLTPQTASELSYTPEDRLLRA 182

Query: 364 ILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKK 462
           ILGIQVST+KETSL+LPIGGRGRVIDVRWI +K
Sbjct: 183 ILGIQVSTSKETSLRLPIGGRGRVIDVRWIHRK 215


>gb|ANO44662.1| RNA polymerase beta subunit (chloroplast) [Bomarea sp. 878]
          Length = 1070

 Score =  290 bits (743), Expect = 2e-89
 Identities = 148/154 (96%), Positives = 149/154 (96%)
 Frame = +1

Query: 1    AATVGGEHDVEKKNVLVAYMPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTHVTSQ 180
            AATVGGE  + K NVLVAYMPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTHVTSQ
Sbjct: 642  AATVGGELALGK-NVLVAYMPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTHVTSQ 700

Query: 181  GPERITKEIPHLEAHLLRNLDRNGIVMLGSWIEAGDILVGKLTPQAANESSYAPEDRLLR 360
            GPERITKEIPHLEAHLLRNLDRNGIVMLGSWIEAGDILVGKLTPQ ANESSYAPEDRLLR
Sbjct: 701  GPERITKEIPHLEAHLLRNLDRNGIVMLGSWIEAGDILVGKLTPQTANESSYAPEDRLLR 760

Query: 361  AILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKK 462
            AILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKK
Sbjct: 761  AILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKK 794


>ref|YP_009092759.1| RNA polymerase beta subunit [Bomarea edulis]
 gb|AIR12595.1| RNA polymerase beta subunit (plastid) [Bomarea edulis]
          Length = 1070

 Score =  290 bits (743), Expect = 2e-89
 Identities = 148/154 (96%), Positives = 149/154 (96%)
 Frame = +1

Query: 1    AATVGGEHDVEKKNVLVAYMPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTHVTSQ 180
            AATVGGE  + K NVLVAYMPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTHVTSQ
Sbjct: 642  AATVGGELALGK-NVLVAYMPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTHVTSQ 700

Query: 181  GPERITKEIPHLEAHLLRNLDRNGIVMLGSWIEAGDILVGKLTPQAANESSYAPEDRLLR 360
            GPERITKEIPHLEAHLLRNLDRNGIVMLGSWIEAGDILVGKLTPQ ANESSYAPEDRLLR
Sbjct: 701  GPERITKEIPHLEAHLLRNLDRNGIVMLGSWIEAGDILVGKLTPQTANESSYAPEDRLLR 760

Query: 361  AILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKK 462
            AILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKK
Sbjct: 761  AILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKK 794


>gb|AEX94349.1| RNA polymerase beta subunit (chloroplast) [Drimia altissima]
          Length = 1070

 Score =  290 bits (743), Expect = 2e-89
 Identities = 148/154 (96%), Positives = 150/154 (97%)
 Frame = +1

Query: 1    AATVGGEHDVEKKNVLVAYMPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTHVTSQ 180
            AATVGGE  + K NVLVAYMPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEI+THVTSQ
Sbjct: 642  AATVGGELALGK-NVLVAYMPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIKTHVTSQ 700

Query: 181  GPERITKEIPHLEAHLLRNLDRNGIVMLGSWIEAGDILVGKLTPQAANESSYAPEDRLLR 360
            GPERITKEIPHLEAHLLRNLDRNGIVMLGSWIEAGDILVGKLTPQAANESSYAPEDRLLR
Sbjct: 701  GPERITKEIPHLEAHLLRNLDRNGIVMLGSWIEAGDILVGKLTPQAANESSYAPEDRLLR 760

Query: 361  AILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKK 462
            AILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKK
Sbjct: 761  AILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKK 794


>gb|AEX94347.1| RNA polymerase beta subunit (chloroplast) [Phormium tenax]
          Length = 1070

 Score =  290 bits (743), Expect = 2e-89
 Identities = 148/154 (96%), Positives = 150/154 (97%)
 Frame = +1

Query: 1    AATVGGEHDVEKKNVLVAYMPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTHVTSQ 180
            AATVGGE  + K NVLVAYMPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTHVTSQ
Sbjct: 642  AATVGGELALGK-NVLVAYMPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTHVTSQ 700

Query: 181  GPERITKEIPHLEAHLLRNLDRNGIVMLGSWIEAGDILVGKLTPQAANESSYAPEDRLLR 360
            GPERITKEIPHLEAHLLRNLDRNGIV+LGSWIEAGDILVGKLTPQAANESSYAPEDRLLR
Sbjct: 701  GPERITKEIPHLEAHLLRNLDRNGIVILGSWIEAGDILVGKLTPQAANESSYAPEDRLLR 760

Query: 361  AILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKK 462
            AILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKK
Sbjct: 761  AILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKK 794


>gb|AFB18348.1| RNA polymerase beta subunit, partial (plastid) [Phormium tenax]
          Length = 1074

 Score =  290 bits (743), Expect = 2e-89
 Identities = 148/154 (96%), Positives = 150/154 (97%)
 Frame = +1

Query: 1    AATVGGEHDVEKKNVLVAYMPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTHVTSQ 180
            AATVGGE  + K NVLVAYMPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTHVTSQ
Sbjct: 647  AATVGGELALGK-NVLVAYMPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTHVTSQ 705

Query: 181  GPERITKEIPHLEAHLLRNLDRNGIVMLGSWIEAGDILVGKLTPQAANESSYAPEDRLLR 360
            GPERITKEIPHLEAHLLRNLDRNGIV+LGSWIEAGDILVGKLTPQAANESSYAPEDRLLR
Sbjct: 706  GPERITKEIPHLEAHLLRNLDRNGIVILGSWIEAGDILVGKLTPQAANESSYAPEDRLLR 765

Query: 361  AILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKK 462
            AILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKK
Sbjct: 766  AILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKK 799


>gb|AFB18343.1| RNA polymerase beta subunit (plastid) [Lomandra longifolia]
          Length = 1070

 Score =  290 bits (742), Expect = 3e-89
 Identities = 147/154 (95%), Positives = 149/154 (96%)
 Frame = +1

Query: 1    AATVGGEHDVEKKNVLVAYMPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTHVTSQ 180
            AATVGGE  + K NVLV YMPWEGYNFEDAVLISERL+YEDIYTSFHIRKYEIQTHVTSQ
Sbjct: 642  AATVGGELALGK-NVLVVYMPWEGYNFEDAVLISERLIYEDIYTSFHIRKYEIQTHVTSQ 700

Query: 181  GPERITKEIPHLEAHLLRNLDRNGIVMLGSWIEAGDILVGKLTPQAANESSYAPEDRLLR 360
            GPERITKEIPHLEAHLLRNLDRNGIVMLGSWIEAGDILVGKLTPQAANESSYAPEDRLLR
Sbjct: 701  GPERITKEIPHLEAHLLRNLDRNGIVMLGSWIEAGDILVGKLTPQAANESSYAPEDRLLR 760

Query: 361  AILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKK 462
            AILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKK
Sbjct: 761  AILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKK 794


>ref|YP_009334736.1| RNA polymerase beta subunit (chloroplast) [Chlorogalum pomeridianum]
 gb|APO11629.1| RNA polymerase beta subunit (chloroplast) [Chlorogalum pomeridianum]
          Length = 1070

 Score =  290 bits (741), Expect = 4e-89
 Identities = 148/154 (96%), Positives = 149/154 (96%)
 Frame = +1

Query: 1    AATVGGEHDVEKKNVLVAYMPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTHVTSQ 180
            AATVGGE  + K NVLVAYMPWEGYNFEDAVLISERLVYEDIY SFHIRKYEIQTHVTSQ
Sbjct: 642  AATVGGELALGK-NVLVAYMPWEGYNFEDAVLISERLVYEDIYPSFHIRKYEIQTHVTSQ 700

Query: 181  GPERITKEIPHLEAHLLRNLDRNGIVMLGSWIEAGDILVGKLTPQAANESSYAPEDRLLR 360
            GPERITKEIPHLEAHLLRNLDRNGIVMLGSWIEAGDILVGKLTPQAANESSYAPEDRLLR
Sbjct: 701  GPERITKEIPHLEAHLLRNLDRNGIVMLGSWIEAGDILVGKLTPQAANESSYAPEDRLLR 760

Query: 361  AILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKK 462
            AILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKK
Sbjct: 761  AILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKK 794


>ref|YP_009334482.1| RNA polymerase beta subunit (chloroplast) [Anemarrhena asphodeloides]
 gb|AEX94324.1| RNA polymerase beta subunit (chloroplast) [Anemarrhena asphodeloides]
 gb|APO11292.1| RNA polymerase beta subunit (chloroplast) [Anemarrhena asphodeloides]
          Length = 1070

 Score =  290 bits (741), Expect = 4e-89
 Identities = 148/154 (96%), Positives = 149/154 (96%)
 Frame = +1

Query: 1    AATVGGEHDVEKKNVLVAYMPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTHVTSQ 180
            AATVGGE  + K NVLVAYMPWEGYN EDAVLISERLVYEDIYTSFHIRKYEIQTHVTSQ
Sbjct: 642  AATVGGELSLGK-NVLVAYMPWEGYNSEDAVLISERLVYEDIYTSFHIRKYEIQTHVTSQ 700

Query: 181  GPERITKEIPHLEAHLLRNLDRNGIVMLGSWIEAGDILVGKLTPQAANESSYAPEDRLLR 360
            GPERITKEIPHLEAHLLRNLDRNGIVMLGSWIEAGDILVGKLTPQAANESSYAPEDRLLR
Sbjct: 701  GPERITKEIPHLEAHLLRNLDRNGIVMLGSWIEAGDILVGKLTPQAANESSYAPEDRLLR 760

Query: 361  AILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKK 462
            AILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKK
Sbjct: 761  AILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKK 794


>sp|P08036.1|RPOB_SAPOF RecName: Full=DNA-directed RNA polymerase subunit beta; AltName:
           Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
           subunit beta; Short=RNA polymerase subunit beta
 emb|CAA30075.1| RNA polymerase, partial (chloroplast) [Saponaria officinalis]
          Length = 417

 Score =  274 bits (701), Expect = 6e-89
 Identities = 138/154 (89%), Positives = 144/154 (93%)
 Frame = +1

Query: 1   AATVGGEHDVEKKNVLVAYMPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTHVTSQ 180
           AATVGGE  + K NVLVAYMPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQT+VTSQ
Sbjct: 84  AATVGGELGLGK-NVLVAYMPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTYVTSQ 142

Query: 181 GPERITKEIPHLEAHLLRNLDRNGIVMLGSWIEAGDILVGKLTPQAANESSYAPEDRLLR 360
           GPER+T EIPHLEAHLLRNLD+NGIV LGSW+E GDILVGKLTPQ A ESSYAPEDRLLR
Sbjct: 143 GPERVTSEIPHLEAHLLRNLDKNGIVGLGSWVETGDILVGKLTPQMAKESSYAPEDRLLR 202

Query: 361 AILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKK 462
           AILGIQVST+KET LKLPIGGRGRVIDVRWIQKK
Sbjct: 203 AILGIQVSTSKETCLKLPIGGRGRVIDVRWIQKK 236


>gb|AEX94350.1| RNA polymerase beta subunit (chloroplast) [Ledebouria cordifolia]
          Length = 1070

 Score =  289 bits (740), Expect = 6e-89
 Identities = 148/154 (96%), Positives = 149/154 (96%)
 Frame = +1

Query: 1    AATVGGEHDVEKKNVLVAYMPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTHVTSQ 180
            AATVGGE  + K NVLVAYMPWEGYN EDAVLISERLVYEDIYTSFHIRKYEIQTHVTSQ
Sbjct: 642  AATVGGELTLGK-NVLVAYMPWEGYNSEDAVLISERLVYEDIYTSFHIRKYEIQTHVTSQ 700

Query: 181  GPERITKEIPHLEAHLLRNLDRNGIVMLGSWIEAGDILVGKLTPQAANESSYAPEDRLLR 360
            GPERITKEIPHLEAHLLRNLDRNGIVMLGSWIEAGDILVGKLTPQAANESSYAPEDRLLR
Sbjct: 701  GPERITKEIPHLEAHLLRNLDRNGIVMLGSWIEAGDILVGKLTPQAANESSYAPEDRLLR 760

Query: 361  AILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKK 462
            AILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKK
Sbjct: 761  AILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKK 794


>ref|YP_009327296.1| RNA polymerase beta subunit (chloroplast) [Agave americana]
 gb|AOV94030.1| RNA polymerase beta subunit (chloroplast) [Agave americana]
          Length = 1068

 Score =  289 bits (739), Expect = 8e-89
 Identities = 148/154 (96%), Positives = 149/154 (96%)
 Frame = +1

Query: 1    AATVGGEHDVEKKNVLVAYMPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTHVTSQ 180
            AATVGGE  + K NVLVAYMPWEGYN EDAVLISERLVYEDIYTSFHIRKYEIQTHVTSQ
Sbjct: 640  AATVGGELALGK-NVLVAYMPWEGYNSEDAVLISERLVYEDIYTSFHIRKYEIQTHVTSQ 698

Query: 181  GPERITKEIPHLEAHLLRNLDRNGIVMLGSWIEAGDILVGKLTPQAANESSYAPEDRLLR 360
            GPERITKEIPHLEAHLLRNLDRNGIVMLGSWIEAGDILVGKLTPQAANESSYAPEDRLLR
Sbjct: 699  GPERITKEIPHLEAHLLRNLDRNGIVMLGSWIEAGDILVGKLTPQAANESSYAPEDRLLR 758

Query: 361  AILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKK 462
            AILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKK
Sbjct: 759  AILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKK 792


>ref|YP_009335239.1| RNA polymerase beta subunit (chloroplast) [Manfreda virginica]
 gb|AEX94328.1| RNA polymerase beta subunit (chloroplast) [Manfreda virginica]
 gb|AEX94329.1| RNA polymerase beta subunit (chloroplast) [Polianthes sp. Pires
            2011-05]
 gb|APO12297.1| RNA polymerase beta subunit (chloroplast) [Manfreda virginica]
 gb|APO12554.1| RNA polymerase beta subunit (chloroplast) [Polianthes sp. Pires 2011]
          Length = 1068

 Score =  289 bits (739), Expect = 8e-89
 Identities = 148/154 (96%), Positives = 149/154 (96%)
 Frame = +1

Query: 1    AATVGGEHDVEKKNVLVAYMPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTHVTSQ 180
            AATVGGE  + K NVLVAYMPWEGYN EDAVLISERLVYEDIYTSFHIRKYEIQTHVTSQ
Sbjct: 640  AATVGGELALGK-NVLVAYMPWEGYNSEDAVLISERLVYEDIYTSFHIRKYEIQTHVTSQ 698

Query: 181  GPERITKEIPHLEAHLLRNLDRNGIVMLGSWIEAGDILVGKLTPQAANESSYAPEDRLLR 360
            GPERITKEIPHLEAHLLRNLDRNGIVMLGSWIEAGDILVGKLTPQAANESSYAPEDRLLR
Sbjct: 699  GPERITKEIPHLEAHLLRNLDRNGIVMLGSWIEAGDILVGKLTPQAANESSYAPEDRLLR 758

Query: 361  AILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKK 462
            AILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKK
Sbjct: 759  AILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKK 792


>gb|AAZ03996.1| RNA polymerase beta chain, partial (chloroplast) [Yucca schidigera]
          Length = 1069

 Score =  289 bits (739), Expect = 8e-89
 Identities = 148/154 (96%), Positives = 149/154 (96%)
 Frame = +1

Query: 1    AATVGGEHDVEKKNVLVAYMPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTHVTSQ 180
            AATVGGE  + K NVLVAYMPWEGYN EDAVLISERLVYEDIYTSFHIRKYEIQTHVTSQ
Sbjct: 642  AATVGGELALGK-NVLVAYMPWEGYNSEDAVLISERLVYEDIYTSFHIRKYEIQTHVTSQ 700

Query: 181  GPERITKEIPHLEAHLLRNLDRNGIVMLGSWIEAGDILVGKLTPQAANESSYAPEDRLLR 360
            GPERITKEIPHLEAHLLRNLDRNGIVMLGSWIEAGDILVGKLTPQAANESSYAPEDRLLR
Sbjct: 701  GPERITKEIPHLEAHLLRNLDRNGIVMLGSWIEAGDILVGKLTPQAANESSYAPEDRLLR 760

Query: 361  AILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKK 462
            AILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKK
Sbjct: 761  AILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKK 794


>ref|YP_009335750.1| RNA polymerase beta subunit (chloroplast) [Yucca queretaroensis]
 ref|YP_009335835.1| RNA polymerase beta subunit (chloroplast) [Yucca schidigera]
 gb|APO12894.1| RNA polymerase beta subunit (chloroplast) [Yucca queretaroensis]
 gb|APO12979.1| RNA polymerase beta subunit (chloroplast) [Yucca schidigera]
          Length = 1070

 Score =  289 bits (739), Expect = 8e-89
 Identities = 148/154 (96%), Positives = 149/154 (96%)
 Frame = +1

Query: 1    AATVGGEHDVEKKNVLVAYMPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTHVTSQ 180
            AATVGGE  + K NVLVAYMPWEGYN EDAVLISERLVYEDIYTSFHIRKYEIQTHVTSQ
Sbjct: 642  AATVGGELALGK-NVLVAYMPWEGYNSEDAVLISERLVYEDIYTSFHIRKYEIQTHVTSQ 700

Query: 181  GPERITKEIPHLEAHLLRNLDRNGIVMLGSWIEAGDILVGKLTPQAANESSYAPEDRLLR 360
            GPERITKEIPHLEAHLLRNLDRNGIVMLGSWIEAGDILVGKLTPQAANESSYAPEDRLLR
Sbjct: 701  GPERITKEIPHLEAHLLRNLDRNGIVMLGSWIEAGDILVGKLTPQAANESSYAPEDRLLR 760

Query: 361  AILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKK 462
            AILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKK
Sbjct: 761  AILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKK 794


>ref|YP_009335665.1| RNA polymerase beta subunit (chloroplast) [Yucca filamentosa]
 gb|APO12809.1| RNA polymerase beta subunit (chloroplast) [Yucca filamentosa]
          Length = 1070

 Score =  289 bits (739), Expect = 8e-89
 Identities = 148/154 (96%), Positives = 149/154 (96%)
 Frame = +1

Query: 1    AATVGGEHDVEKKNVLVAYMPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTHVTSQ 180
            AATVGGE  + K NVLVAYMPWEGYN EDAVLISERLVYEDIYTSFHIRKYEIQTHVTSQ
Sbjct: 642  AATVGGELALGK-NVLVAYMPWEGYNSEDAVLISERLVYEDIYTSFHIRKYEIQTHVTSQ 700

Query: 181  GPERITKEIPHLEAHLLRNLDRNGIVMLGSWIEAGDILVGKLTPQAANESSYAPEDRLLR 360
            GPERITKEIPHLEAHLLRNLDRNGIVMLGSWIEAGDILVGKLTPQAANESSYAPEDRLLR
Sbjct: 701  GPERITKEIPHLEAHLLRNLDRNGIVMLGSWIEAGDILVGKLTPQAANESSYAPEDRLLR 760

Query: 361  AILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKK 462
            AILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKK
Sbjct: 761  AILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKK 794


>ref|YP_009335580.1| RNA polymerase beta subunit (chloroplast) [Yucca brevifolia]
 gb|APO12724.1| RNA polymerase beta subunit (chloroplast) [Yucca brevifolia]
          Length = 1070

 Score =  289 bits (739), Expect = 8e-89
 Identities = 148/154 (96%), Positives = 149/154 (96%)
 Frame = +1

Query: 1    AATVGGEHDVEKKNVLVAYMPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTHVTSQ 180
            AATVGGE  + K NVLVAYMPWEGYN EDAVLISERLVYEDIYTSFHIRKYEIQTHVTSQ
Sbjct: 642  AATVGGELALGK-NVLVAYMPWEGYNSEDAVLISERLVYEDIYTSFHIRKYEIQTHVTSQ 700

Query: 181  GPERITKEIPHLEAHLLRNLDRNGIVMLGSWIEAGDILVGKLTPQAANESSYAPEDRLLR 360
            GPERITKEIPHLEAHLLRNLDRNGIVMLGSWIEAGDILVGKLTPQAANESSYAPEDRLLR
Sbjct: 701  GPERITKEIPHLEAHLLRNLDRNGIVMLGSWIEAGDILVGKLTPQAANESSYAPEDRLLR 760

Query: 361  AILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKK 462
            AILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKK
Sbjct: 761  AILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKK 794