BLASTX nr result

ID: Ophiopogon24_contig00036980 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00036980
         (389 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020251478.1| ATP-dependent DNA helicase MER3 homolog [Asp...   122   1e-29
gb|ONK81220.1| uncharacterized protein A4U43_C01F26660 [Asparagu...   122   1e-29
ref|XP_010936598.1| PREDICTED: ATP-dependent DNA helicase MER3 h...    55   3e-06

>ref|XP_020251478.1| ATP-dependent DNA helicase MER3 homolog [Asparagus officinalis]
          Length = 1124

 Score =  122 bits (306), Expect = 1e-29
 Identities = 61/108 (56%), Positives = 81/108 (75%)
 Frame = +2

Query: 14   LIDDVLSSPVVAARQTNNISRSSRNVASSEHSVEPRGSMTGQQDRSNISSHNLKIDAQAI 193
            L+ D+L+SPV AARQ++++SRSSR+V +S HS E  G++ G  D+   SS +L IDAQA+
Sbjct: 1018 LVIDILNSPVEAARQSDDVSRSSRSVVTSVHSTEANGTVNGDSDKKWQSSGHLIIDAQAV 1077

Query: 194  IGCKRAHPLKSPTQASNMQGEKRCCLETTPSHHSEVSFLGFKSVFSFL 337
             GCKR++P +S +   ++QGE RCCLE  P H  EVSFLGFKSVFSFL
Sbjct: 1078 -GCKRSYPFESSSPTFDVQGENRCCLEKPPDHQKEVSFLGFKSVFSFL 1124


>gb|ONK81220.1| uncharacterized protein A4U43_C01F26660 [Asparagus officinalis]
          Length = 1192

 Score =  122 bits (306), Expect = 1e-29
 Identities = 61/108 (56%), Positives = 81/108 (75%)
 Frame = +2

Query: 14   LIDDVLSSPVVAARQTNNISRSSRNVASSEHSVEPRGSMTGQQDRSNISSHNLKIDAQAI 193
            L+ D+L+SPV AARQ++++SRSSR+V +S HS E  G++ G  D+   SS +L IDAQA+
Sbjct: 1086 LVIDILNSPVEAARQSDDVSRSSRSVVTSVHSTEANGTVNGDSDKKWQSSGHLIIDAQAV 1145

Query: 194  IGCKRAHPLKSPTQASNMQGEKRCCLETTPSHHSEVSFLGFKSVFSFL 337
             GCKR++P +S +   ++QGE RCCLE  P H  EVSFLGFKSVFSFL
Sbjct: 1146 -GCKRSYPFESSSPTFDVQGENRCCLEKPPDHQKEVSFLGFKSVFSFL 1192


>ref|XP_010936598.1| PREDICTED: ATP-dependent DNA helicase MER3 homolog [Elaeis
            guineensis]
          Length = 1115

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 33/103 (32%), Positives = 54/103 (52%)
 Frame = +2

Query: 29   LSSPVVAARQTNNISRSSRNVASSEHSVEPRGSMTGQQDRSNISSHNLKIDAQAIIGCKR 208
            +SSP+        IS SS +++ SE S    G +    + + ++ ++  ++   ++GCKR
Sbjct: 1015 ISSPIETKGSCKKISGSSSSISDSEFSSAFAGDLNDGSENNKLT-YDGPLEGMKMVGCKR 1073

Query: 209  AHPLKSPTQASNMQGEKRCCLETTPSHHSEVSFLGFKSVFSFL 337
            A P++    +     ++    E  P    EVSFLGFKSVFSFL
Sbjct: 1074 AFPMELDPVSKRPDVQQHRSFEP-PGDRREVSFLGFKSVFSFL 1115


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