BLASTX nr result

ID: Ophiopogon24_contig00036849 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00036849
         (439 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006386682.1| hypothetical protein POPTR_0002s18640g, part...    66   7e-11
ref|XP_022881063.1| uncharacterized protein LOC111398382 [Olea e...    42   7e-06

>ref|XP_006386682.1| hypothetical protein POPTR_0002s18640g, partial [Populus
           trichocarpa]
          Length = 153

 Score = 66.2 bits (160), Expect = 7e-11
 Identities = 46/142 (32%), Positives = 85/142 (59%), Gaps = 3/142 (2%)
 Frame = -1

Query: 439 FMITLQDMK-YIQIGLQTKGYKEVIKGDNLLVHVAFLGRCCKDSKTNVKYM*MK*LLY*V 263
           F++ ++D   +I+IG+QTKG+++  KG+NLL+ + FLG+  + S T  ++  +K     +
Sbjct: 25  FLLDMKDFTDHIKIGIQTKGFEQ-FKGNNLLLCIGFLGKMGRSSNTRYRFESLK-----M 78

Query: 262 LKE*K**NH*RMIREEWQD*NGT*ISS*NQQKTIIS-QDSIVYKDNKGRTSIRFTNYVPI 86
           +K  K  +   +   EW+      +    ++++I++ Q  + YK+N G TS+RFT+Y   
Sbjct: 79  IKPTKY-SAEDLAGLEWK------LDDFIKRESILAPQSPLTYKNNIGETSVRFTDYTKT 131

Query: 85  TNREL-SDVETDIESDMVHIEI 23
             R++ SD ETDIE ++ HI +
Sbjct: 132 LARDIDSDQETDIEMNLAHIHL 153


>ref|XP_022881063.1| uncharacterized protein LOC111398382 [Olea europaea var.
           sylvestris]
          Length = 759

 Score = 42.0 bits (97), Expect(2) = 7e-06
 Identities = 18/24 (75%), Positives = 21/24 (87%)
 Frame = -3

Query: 248 MIKPLTYDSGGMAGLEWNLDKFIE 177
           MIKP TYDS  +AGLEWNL+KF+E
Sbjct: 1   MIKPKTYDSELLAGLEWNLEKFLE 24



 Score = 35.4 bits (80), Expect(2) = 7e-06
 Identities = 20/52 (38%), Positives = 31/52 (59%)
 Frame = -1

Query: 178 NQQKTIISQDSIVYKDNKGRTSIRFTNYVPITNRELSDVETDIESDMVHIEI 23
           NQ+  ++ Q++I YKD  GRTS+RF      TN E +D  T+I  +  + E+
Sbjct: 25  NQEPILVPQETITYKDLYGRTSLRFG-----TNIEENDNITEISENSNYKEL 71


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