BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00036804
         (553 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK77766.1| uncharacterized protein A4U43_C02F10310 [Asparagu...   120   3e-28
ref|XP_020253900.1| LOW QUALITY PROTEIN: pentatricopeptide repea...   119   9e-28
gb|OAY82624.1| Pentatricopeptide repeat-containing protein, mito...    99   9e-21
ref|XP_020112002.1| pentatricopeptide repeat-containing protein ...    97   4e-20
ref|XP_008804184.1| PREDICTED: pentatricopeptide repeat-containi...    86   3e-16
ref|XP_008804183.1| PREDICTED: pentatricopeptide repeat-containi...    86   3e-16
ref|XP_010930167.1| PREDICTED: pentatricopeptide repeat-containi...    83   5e-15
ref|XP_010930166.1| PREDICTED: pentatricopeptide repeat-containi...    83   5e-15
ref|XP_009401150.1| PREDICTED: pentatricopeptide repeat-containi...    75   2e-12
ref|XP_020702349.1| pentatricopeptide repeat-containing protein ...    68   8e-10
ref|XP_020702348.1| pentatricopeptide repeat-containing protein ...    68   8e-10
ref|XP_020592093.1| pentatricopeptide repeat-containing protein ...    67   1e-09
gb|PKA56286.1| Pentatricopeptide repeat-containing protein [Apos...    61   1e-07
ref|XP_008380795.1| PREDICTED: pentatricopeptide repeat-containi...    59   6e-07
ref|XP_010256457.1| PREDICTED: pentatricopeptide repeat-containi...    57   5e-06
ref|XP_021291235.1| pentatricopeptide repeat-containing protein ...    56   1e-05

>gb|ONK77766.1| uncharacterized protein A4U43_C02F10310 [Asparagus officinalis]
          Length = 889

 Score =  120 bits (302), Expect = 3e-28
 Identities = 65/104 (62%), Positives = 76/104 (73%)
 Frame = +2

Query: 242 SRCFPPILSFLSRQSPLKRYNLCACCCSIPYSSSNEDSLQGLIDPELTVPSKGKSLSAKD 421
           SRCFPPIL+F+S Q+PLK Y+L        YSS+N +SLQGLIDP+LTV SK  SLSAKD
Sbjct: 118 SRCFPPILNFISSQNPLKSYSLYPVLIGNHYSSTNGNSLQGLIDPQLTVSSKEASLSAKD 177

Query: 422 FAFLEEKAAGRGPSDPSGEFSEEAALISESIGSNVSEFDDKTLK 553
           FAFLE++A    PS PSGEFSEEA LI     SN++EFDD   K
Sbjct: 178 FAFLEDEAGAHQPSAPSGEFSEEAVLIV----SNLNEFDDSAQK 217


>ref|XP_020253900.1| LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein
           At1g06710, mitochondrial-like [Asparagus officinalis]
          Length = 1074

 Score =  119 bits (298), Expect = 9e-28
 Identities = 64/103 (62%), Positives = 75/103 (72%)
 Frame = +2

Query: 245 RCFPPILSFLSRQSPLKRYNLCACCCSIPYSSSNEDSLQGLIDPELTVPSKGKSLSAKDF 424
           RCFPPIL+F+S Q+PLK Y+L        YSS+N +SLQGLIDP+LTV SK  SLSAKDF
Sbjct: 109 RCFPPILNFISSQNPLKSYSLYPVLIGNHYSSTNGNSLQGLIDPQLTVSSKEASLSAKDF 168

Query: 425 AFLEEKAAGRGPSDPSGEFSEEAALISESIGSNVSEFDDKTLK 553
           AFLE++A    PS PSGEFSEEA LI     SN++EFDD   K
Sbjct: 169 AFLEDEAGAHQPSAPSGEFSEEAVLIV----SNLNEFDDSAQK 207


>gb|OAY82624.1| Pentatricopeptide repeat-containing protein, mitochondrial [Ananas
           comosus]
          Length = 1014

 Score = 99.4 bits (246), Expect = 9e-21
 Identities = 68/139 (48%), Positives = 86/139 (61%), Gaps = 18/139 (12%)
 Frame = +2

Query: 191 MSRRAAAVVLSQSP-----AAVSRCFPPILSFLSRQSPLKRYNLCAC-CCSIPYSSSN-- 346
           M RRAAA+VLS+S      A  +  FPP  S  SR +P KR  LCA  CCS   SSS+  
Sbjct: 1   MRRRAAALVLSRSSPLSPFAGAAPPFPPHKSGFSRANPFKRPRLCALLCCSGTCSSSSSP 60

Query: 347 EDSLQGLIDPELTVPS----------KGKSLSAKDFAFLEEKAAGRGPSDPSGEFSEEAA 496
           +D L GL+DPE + PS          +G S+SAKDFAFL+E AA R  +D  GEFS EA 
Sbjct: 61  DDDLSGLVDPEFSDPSNGDSRGRGSHRGGSVSAKDFAFLQEAAAERSSTD-LGEFSPEAV 119

Query: 497 LISESIGSNVSEFDDKTLK 553
           LIS++I ++ ++FD KT K
Sbjct: 120 LISKAIRASGTDFDSKTEK 138


>ref|XP_020112002.1| pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial [Ananas comosus]
          Length = 1014

 Score = 97.4 bits (241), Expect = 4e-20
 Identities = 67/139 (48%), Positives = 84/139 (60%), Gaps = 18/139 (12%)
 Frame = +2

Query: 191 MSRRAAAVVLSQSP-----AAVSRCFPPILSFLSRQSPLKRYNLCAC-CCSIPYSSSN-- 346
           M RRAAA+VLS+S      A  +  FPP  S  SR +P KR  LCA  CCS   SSS+  
Sbjct: 1   MRRRAAALVLSRSSPLSPFAGAAPPFPPHKSGFSRANPFKRPRLCALLCCSGTCSSSSSP 60

Query: 347 EDSLQGLIDPELTVPSKGK----------SLSAKDFAFLEEKAAGRGPSDPSGEFSEEAA 496
           +D L GL+DPE + PS G           S+SAKDFAFL+E AA R  +D  GEFS E  
Sbjct: 61  DDDLSGLVDPEFSDPSNGDSRGRGSHHGGSVSAKDFAFLQEAAAERSSTD-LGEFSPEGV 119

Query: 497 LISESIGSNVSEFDDKTLK 553
           LIS++I ++ ++FD KT K
Sbjct: 120 LISKAIRASGTDFDSKTEK 138


>ref|XP_008804184.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial isoform X2 [Phoenix dactylifera]
 ref|XP_008804185.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial isoform X2 [Phoenix dactylifera]
          Length = 1012

 Score = 86.3 bits (212), Expect = 3e-16
 Identities = 59/140 (42%), Positives = 81/140 (57%), Gaps = 19/140 (13%)
 Frame = +2

Query: 191 MSRRAAAVVLSQSPAA-----VSRCFPPILSFLSRQSPLKRYNLCACCCSIPYSSSNEDS 355
           MSRRAAA+VLSQSPA       + C PP+ S +SR    K+  + +   S    SS +D 
Sbjct: 1   MSRRAAAIVLSQSPATFASLRANHCLPPMQSGISRLHSFKKPGI-SFFSSGSSCSSPDDD 59

Query: 356 LQGLIDPELTVP----------SKGKSLSAKDFAFLEEKAAGR----GPSDPSGEFSEEA 493
           L GL+DPE + P           +G S+S KDFAFL+E  A R    G +  SG+FSEEA
Sbjct: 60  LNGLVDPEFSPPWNGACRDREDCRGASVSPKDFAFLQEAIAERDALPGKTLDSGKFSEEA 119

Query: 494 ALISESIGSNVSEFDDKTLK 553
            LI++++ ++   F+DKT K
Sbjct: 120 ILIAKAVRASGGVFNDKTEK 139


>ref|XP_008804183.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial isoform X1 [Phoenix dactylifera]
          Length = 1012

 Score = 86.3 bits (212), Expect = 3e-16
 Identities = 59/140 (42%), Positives = 81/140 (57%), Gaps = 19/140 (13%)
 Frame = +2

Query: 191 MSRRAAAVVLSQSPAA-----VSRCFPPILSFLSRQSPLKRYNLCACCCSIPYSSSNEDS 355
           MSRRAAA+VLSQSPA       + C PP+ S +SR    K+  + +   S    SS +D 
Sbjct: 1   MSRRAAAIVLSQSPATFASLRANHCLPPMQSGISRLHSFKKPGI-SFFSSGSSCSSPDDD 59

Query: 356 LQGLIDPELTVP----------SKGKSLSAKDFAFLEEKAAGR----GPSDPSGEFSEEA 493
           L GL+DPE + P           +G S+S KDFAFL+E  A R    G +  SG+FSEEA
Sbjct: 60  LNGLVDPEFSPPWNGACRDREDCRGASVSPKDFAFLQEAIAERDALPGKTLDSGKFSEEA 119

Query: 494 ALISESIGSNVSEFDDKTLK 553
            LI++++ ++   F+DKT K
Sbjct: 120 ILIAKAVRASGGVFNDKTEK 139


>ref|XP_010930167.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial isoform X2 [Elaeis guineensis]
          Length = 1005

 Score = 82.8 bits (203), Expect = 5e-15
 Identities = 59/141 (41%), Positives = 81/141 (57%), Gaps = 20/141 (14%)
 Frame = +2

Query: 191 MSRRAAAVVLSQSPAA-----VSRCFPPILSFLSRQSPLKRYNLCACCCSIPYS-SSNED 352
           MSRRAAA+VLSQSPA       + CF P+ S++   +P ++   C    S   S SS +D
Sbjct: 1   MSRRAAAIVLSQSPALFASLRTNHCFRPMQSWIFHLNPFRKP--CISFFSSGSSCSSPDD 58

Query: 353 SLQGLIDPELTVP----------SKGKSLSAKDFAFLEEKAAGR----GPSDPSGEFSEE 490
            L GLIDP+ + P           +G S+S KDFAFL+E  A R    G +  SG+FSEE
Sbjct: 59  DLSGLIDPDFSPPWNGEYRDRDDRRGASVSPKDFAFLQEAIAERDALPGNTLDSGKFSEE 118

Query: 491 AALISESIGSNVSEFDDKTLK 553
           A LI++++ ++   F DKT K
Sbjct: 119 AVLIAKAVRTSGGVFSDKTEK 139


>ref|XP_010930166.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial isoform X1 [Elaeis guineensis]
          Length = 1015

 Score = 82.8 bits (203), Expect = 5e-15
 Identities = 59/141 (41%), Positives = 81/141 (57%), Gaps = 20/141 (14%)
 Frame = +2

Query: 191 MSRRAAAVVLSQSPAA-----VSRCFPPILSFLSRQSPLKRYNLCACCCSIPYS-SSNED 352
           MSRRAAA+VLSQSPA       + CF P+ S++   +P ++   C    S   S SS +D
Sbjct: 1   MSRRAAAIVLSQSPALFASLRTNHCFRPMQSWIFHLNPFRKP--CISFFSSGSSCSSPDD 58

Query: 353 SLQGLIDPELTVP----------SKGKSLSAKDFAFLEEKAAGR----GPSDPSGEFSEE 490
            L GLIDP+ + P           +G S+S KDFAFL+E  A R    G +  SG+FSEE
Sbjct: 59  DLSGLIDPDFSPPWNGEYRDRDDRRGASVSPKDFAFLQEAIAERDALPGNTLDSGKFSEE 118

Query: 491 AALISESIGSNVSEFDDKTLK 553
           A LI++++ ++   F DKT K
Sbjct: 119 AVLIAKAVRTSGGVFSDKTEK 139


>ref|XP_009401150.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial [Musa acuminata subsp. malaccensis]
 ref|XP_018681437.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial [Musa acuminata subsp. malaccensis]
          Length = 1018

 Score = 75.1 bits (183), Expect = 2e-12
 Identities = 61/144 (42%), Positives = 77/144 (53%), Gaps = 23/144 (15%)
 Frame = +2

Query: 191 MSRRAAAVVLSQSPAAVS-----RCFPP--ILSFLSRQSPLKRYNLCACCCSIPYSSSNE 349
           MSRRAAAVVLS+SPA  S     RCFPP   L  +SR +P KR  L +   S    SS +
Sbjct: 1   MSRRAAAVVLSRSPAVASFFSTNRCFPPSQCLISISRHNPFKRPRL-SLFSSGSSCSSPD 59

Query: 350 DSLQGLIDPELTVPSKG----------KSLSAKDFAFLEEKAA------GRGPSDPSGEF 481
           D L+ L DP   VP  G           S+S KDF FL+E A          P D +G+ 
Sbjct: 60  DDLRELNDPGFVVPWDGASHDRENRQEASVSMKDFTFLQEAAVEDRETLAAKPLD-AGKS 118

Query: 482 SEEAALISESIGSNVSEFDDKTLK 553
           S+EA LI++ + ++ S FDD T K
Sbjct: 119 SKEAVLIAKVVRASGSNFDDNTEK 142


>ref|XP_020702349.1| pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial isoform X2 [Dendrobium catenatum]
 gb|PKU72915.1| Pentatricopeptide repeat-containing protein [Dendrobium catenatum]
          Length = 1012

 Score = 67.8 bits (164), Expect = 8e-10
 Identities = 54/141 (38%), Positives = 74/141 (52%), Gaps = 20/141 (14%)
 Frame = +2

Query: 191 MSRRAAAVVLSQSPAAVSR------CFPPILSFLSRQSPLKRYNLCACCCSIPYSSSNED 352
           MSRRA  V+LSQ  A  +       CF  +   + R +P +R  L +   S    SSN D
Sbjct: 3   MSRRAPTVILSQCVAMSAELSGNFLCFLLMNRLICRLNPYRRGRL-SFFSSSSSCSSNCD 61

Query: 353 SLQGLIDPELTVPSKGKSLS----------AKDFAFLEEKAAGRGPSDPSGEF----SEE 490
            L GL+DP+ ++ S G ++           AKDFAFL+E+AA     D S  F    SEE
Sbjct: 62  DLHGLVDPDCSISSNGWTVGQENKKQVVVFAKDFAFLQEEAA-----DCSSTFKIEPSEE 116

Query: 491 AALISESIGSNVSEFDDKTLK 553
           A LI E+I SN  + +++TLK
Sbjct: 117 AVLICEAIRSNFDDLEEETLK 137


>ref|XP_020702348.1| pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial isoform X1 [Dendrobium catenatum]
          Length = 1051

 Score = 67.8 bits (164), Expect = 8e-10
 Identities = 54/141 (38%), Positives = 74/141 (52%), Gaps = 20/141 (14%)
 Frame = +2

Query: 191 MSRRAAAVVLSQSPAAVSR------CFPPILSFLSRQSPLKRYNLCACCCSIPYSSSNED 352
           MSRRA  V+LSQ  A  +       CF  +   + R +P +R  L +   S    SSN D
Sbjct: 3   MSRRAPTVILSQCVAMSAELSGNFLCFLLMNRLICRLNPYRRGRL-SFFSSSSSCSSNCD 61

Query: 353 SLQGLIDPELTVPSKGKSLS----------AKDFAFLEEKAAGRGPSDPSGEF----SEE 490
            L GL+DP+ ++ S G ++           AKDFAFL+E+AA     D S  F    SEE
Sbjct: 62  DLHGLVDPDCSISSNGWTVGQENKKQVVVFAKDFAFLQEEAA-----DCSSTFKIEPSEE 116

Query: 491 AALISESIGSNVSEFDDKTLK 553
           A LI E+I SN  + +++TLK
Sbjct: 117 AVLICEAIRSNFDDLEEETLK 137


>ref|XP_020592093.1| pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial [Phalaenopsis equestris]
 ref|XP_020592094.1| pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial [Phalaenopsis equestris]
 ref|XP_020592096.1| pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial [Phalaenopsis equestris]
          Length = 1013

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 52/137 (37%), Positives = 68/137 (49%), Gaps = 16/137 (11%)
 Frame = +2

Query: 191 MSRRAAAVVLSQSPAAVSRCFPPILSFLSRQSPLKRYNLCACCCSIPYSS------SNED 352
           +SRR  A +L Q  A        +L  LS    +  +N         YSS      S+  
Sbjct: 3   LSRRVPAAILLQCAAMPRDLSENLLCLLSMNRLISLFNTHKRGRLFFYSSRSSSCSSHIG 62

Query: 353 SLQGLIDPELTVPSKG----------KSLSAKDFAFLEEKAAGRGPSDPSGEFSEEAALI 502
            LQGL+DP+ ++   G           ++SAKDFAFL+E AAG   S    EFSE A LI
Sbjct: 63  DLQGLVDPDCSISGNGWVVCKENKKHVAVSAKDFAFLQEAAAGCN-SSLKHEFSEVAVLI 121

Query: 503 SESIGSNVSEFDDKTLK 553
           SE+I SN  + DD+TLK
Sbjct: 122 SEAIRSNFDDLDDQTLK 138


>gb|PKA56286.1| Pentatricopeptide repeat-containing protein [Apostasia shenzhenica]
          Length = 1068

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 43/112 (38%), Positives = 58/112 (51%), Gaps = 10/112 (8%)
 Frame = +2

Query: 248 CFPPILSFLSRQSPLKRYNLCACCCSIPYSSSNEDSLQGLIDPELTVPSKGK-------- 403
           CF PI  +    +P  R      C S    SS ED  +GLI+P+ +  + G         
Sbjct: 50  CFSPIPRWFFLLNPFTRSGFSFSCGS-DRCSSLEDGTEGLIEPDFSTSTIGWRMKEEKEK 108

Query: 404 --SLSAKDFAFLEEKAAGRGPSDPSGEFSEEAALISESIGSNVSEFDDKTLK 553
             ++SAKDF FL+E A     S   GEFSE+A LIS++I +N    D+KTLK
Sbjct: 109 QCAVSAKDFVFLQEAAVDSN-SLHRGEFSEDAILISQAITANHDRLDEKTLK 159


>ref|XP_008380795.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial, partial [Malus domestica]
          Length = 884

 Score = 59.3 bits (142), Expect = 6e-07
 Identities = 49/137 (35%), Positives = 68/137 (49%), Gaps = 16/137 (11%)
 Frame = +2

Query: 191 MSRRAAAVVLSQSPAAVSRCFPPILSFLSRQ------SPLKRYNLCACCCSIPYSSSNED 352
           MSRR    +L QS + VS        F S        SP K +     C      +S+ED
Sbjct: 1   MSRRRLKTLLWQSISTVSSSPLKSNPFFSTNPSHPFPSPFKSHQSLKLCFPRLLCTSSED 60

Query: 353 SLQGLIDP-ELTVPSKG--KSLSAKDFAFLEEK----AAGRGPSDP---SGEFSEEAALI 502
           +L GL+DP +L  P     +S+S ++ A L +     +AG G S P   S +FS  A LI
Sbjct: 61  NLDGLVDPNDLCKPESSGVESISEEELASLRDSVLDTSAGGGSSMPKFESAKFSNNAILI 120

Query: 503 SESIGSNVSEFDDKTLK 553
           S ++ +N+ EFDDKT K
Sbjct: 121 SNAMRNNIDEFDDKTQK 137


>ref|XP_010256457.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial [Nelumbo nucifera]
 ref|XP_019053240.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial [Nelumbo nucifera]
 ref|XP_019053241.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial [Nelumbo nucifera]
          Length = 1083

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 49/147 (33%), Positives = 67/147 (45%), Gaps = 28/147 (19%)
 Frame = +2

Query: 191 MSRRAAAVVLSQSPAAVSRCFPPILSFLSRQSPLKRYNLCACCCSIP------------- 331
           MS R A ++LS S A V+       S  S  S   ++ + +C  S               
Sbjct: 66  MSWRGAKIILSHSLATVA-------SLKSDTSLRPKFLMVSCLPSFNNSRVNFLNSSSRG 118

Query: 332 YSSSNEDSLQGLIDPELTVPSKG-----------KSLSAKDFAFLEEKA----AGRGPSD 466
            SSS++D L GLIDP  ++P  G            S+S +DFAFL +      A R   D
Sbjct: 119 ISSSSQDDLDGLIDPNFSLPDNGLYLAPEKPREETSVSTEDFAFLHDTVLECDASRKSLD 178

Query: 467 PSGEFSEEAALISESIGSNVSEFDDKT 547
            SG+FS+EA +IS  I +N     DKT
Sbjct: 179 -SGKFSDEAIMISREINNNGDNLGDKT 204


>ref|XP_021291235.1| pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial [Herrania umbratica]
 ref|XP_021291236.1| pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial [Herrania umbratica]
 ref|XP_021291237.1| pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial [Herrania umbratica]
          Length = 992

 Score = 55.8 bits (133), Expect = 1e-05
 Identities = 42/102 (41%), Positives = 56/102 (54%), Gaps = 7/102 (6%)
 Frame = +2

Query: 263 LSFLSRQSPLKRYNLCACCCSIPYSSSNEDSLQGLIDPE----LTVPSKGKSLSAKDFAF 430
           L F +R   L R NL +       SSS+ D+L GLIDP+    +    + + LSA+DF F
Sbjct: 16  LLFSARNPQLPRQNLFSPLTRF-ISSSSHDNLDGLIDPDDPFSVQNNPRVEPLSAQDFTF 74

Query: 431 LEEKAAGRGPSDPS---GEFSEEAALISESIGSNVSEFDDKT 547
           L    AG GPS      G+FS +A LI+ +I S+  EF DKT
Sbjct: 75  L---GAGSGPSQEKLNVGKFSNDAILIANAIWSDSGEFGDKT 113