BLASTX nr result
ID: Ophiopogon24_contig00036792
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00036792
(741 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007214528.1| heterodimeric geranylgeranyl pyrophosphate s... 113 2e-26
ref|XP_021692305.1| heterodimeric geranylgeranyl pyrophosphate s... 112 9e-26
ref|XP_021829465.1| heterodimeric geranylgeranyl pyrophosphate s... 111 1e-25
ref|XP_019196842.1| PREDICTED: heterodimeric geranylgeranyl pyro... 110 2e-25
gb|ALT07955.1| putative geranyl diphosphate synthase small subun... 111 2e-25
gb|ABR15421.1| geranyl pyrophosphate synthase small subunit [Men... 111 2e-25
gb|ABW86880.1| geranyl pyrophosphate synthase small subunit [Men... 111 2e-25
ref|XP_011007747.1| PREDICTED: heterodimeric geranylgeranyl pyro... 110 3e-25
ref|XP_007142292.1| hypothetical protein PHAVU_008G268200g [Phas... 109 4e-25
gb|AAS82859.1| geranyl diphosphate synthase small subunit [Antir... 109 6e-25
pdb|3OAB|B Chain B, Mint deletion mutant of heterotetrameric ger... 108 6e-25
pdb|3KRA|B Chain B, Mint heterotetrameric geranyl pyrophosphate ... 108 1e-24
gb|AAF08792.1|AF182827_1 geranyl diphosphate synthase small subu... 109 1e-24
ref|XP_021606317.1| geranylgeranyl pyrophosphate synthase 11, ch... 108 1e-24
ref|XP_021606316.1| geranylgeranyl pyrophosphate synthase 11, ch... 108 1e-24
gb|PIA57840.1| hypothetical protein AQUCO_00500036v1 [Aquilegia ... 108 2e-24
gb|PLY85123.1| hypothetical protein LSAT_9X93420 [Lactuca sativa] 107 2e-24
ref|XP_023764268.1| heterodimeric geranylgeranyl pyrophosphate s... 107 3e-24
ref|XP_017429744.1| PREDICTED: heterodimeric geranylgeranyl pyro... 107 4e-24
pdb|3QKC|B Chain B, Crystal Structure Of Geranyl Diphosphate Syn... 107 4e-24
>ref|XP_007214528.1| heterodimeric geranylgeranyl pyrophosphate synthase small subunit,
chloroplastic [Prunus persica]
gb|ONI13318.1| hypothetical protein PRUPE_4G215000 [Prunus persica]
Length = 296
Score = 113 bits (283), Expect = 2e-26
Identities = 71/187 (37%), Positives = 106/187 (56%), Gaps = 20/187 (10%)
Frame = +1
Query: 133 SINLPLLSSKFSKK-PTTLLKITNVLNYQNQRQATDSWASLTSEINAQIIKHLPKTPPPA 309
SIN L++K S+ P+ + T + Q+ WAS+ +EI + +H+ PP +
Sbjct: 8 SINPNPLANKMSRSNPSRPSRTTMAIMSQDHPY----WASVHAEIEVHLKQHILVRPPLS 63
Query: 310 VTDPMRRLIAAAPPSVASALCLAACELVGGEKSHAMRAACAVQLMHAAAHAH-------- 465
V +PM L+ +APPS ALC+AACELVGG + A+ AA A+ LMHAAA H
Sbjct: 64 VFEPMHHLVFSAPPSPGPALCVAACELVGGHRDQAIAAAAALHLMHAAAVIHEQLLSTDR 123
Query: 466 --------TLPCRSGVDLMTADGLFFLGYEIVTASSD---SDPETAVRVVLEMARAMGPQ 612
+ G++L+T DG+F GYE++ S D ++ + +RV++EM RAMG Q
Sbjct: 124 LKTKPKPRPMVHSPGIELLTGDGMFAFGYELLAKSMDPAQNNSDRILRVIVEMTRAMGSQ 183
Query: 613 GGVVEGQ 633
G+V+GQ
Sbjct: 184 -GMVDGQ 189
>ref|XP_021692305.1| heterodimeric geranylgeranyl pyrophosphate synthase small subunit,
chloroplastic-like [Hevea brasiliensis]
Length = 340
Score = 112 bits (281), Expect = 9e-26
Identities = 78/217 (35%), Positives = 112/217 (51%), Gaps = 20/217 (9%)
Frame = +1
Query: 94 PSAFILSCTKPSKSINLPLLSSKFSKKPTTLLKITNVLNYQNQRQATDSWASLTSEINAQ 273
P A S + P N PLLS ++PT L T +Y W+S+ ++I
Sbjct: 48 PRARAFSTSNP----NHPLLS----RRPTVLAMSTTDQSY---------WSSIHADIETH 90
Query: 274 IIKHLPKTPPPAVTDPMRRLIAAAPPSVASALCLAACELVGGEKSHAMRAACAVQLMHAA 453
+ + +P PP V +PM L AP + A ALC+AACELVGG + AM AA A++LMHA+
Sbjct: 91 LKQAIPIRPPLVVFEPMHHLTFIAPQTSAPALCIAACELVGGHRDQAMAAASALRLMHAS 150
Query: 454 AHAH-TLPCRS--------------GVDLMTADGLFFLGYEIVTASSDSDPETAVRV--- 579
A H LP ++L+ ADG+ G+E++ ++D D +VRV
Sbjct: 151 ASTHENLPLTDRPNTRQTVYHTFGPNIELLIADGMISFGFELLAQTNDPDQNNSVRVLQA 210
Query: 580 VLEMARAMGPQGGVVEGQLMMMNMSEGGGEDCW--AW 684
++E++RAMG Q GV+EGQ E GE + AW
Sbjct: 211 IIEISRAMGSQ-GVMEGQYNESQYGESDGEKLFPAAW 246
>ref|XP_021829465.1| heterodimeric geranylgeranyl pyrophosphate synthase small subunit,
chloroplastic-like [Prunus avium]
Length = 296
Score = 111 bits (278), Expect = 1e-25
Identities = 77/212 (36%), Positives = 109/212 (51%), Gaps = 33/212 (15%)
Frame = +1
Query: 145 PLLSSKFSKKPTTLLKITNVLNYQNQRQATDSWASLTSEINAQIIKHLPKTPPPAVTDPM 324
PL + P+ + T + Q+Q W S+ +EI + + + PP +V +PM
Sbjct: 13 PLANKMPRSNPSRPSRTTMAIMSQDQPY----WTSVHAEIEVHLKQQILVRPPLSVFEPM 68
Query: 325 RRLIAAAPPSVASALCLAACELVGGEKSHAMRAACAVQLMHAAAHAH-TLPCRS------ 483
+ +APPS A ALCLAACELVGG + A+ AA A+ LMHAAA H LP
Sbjct: 69 HHFVFSAPPSPAPALCLAACELVGGHRDQAIAAAAALHLMHAAAVMHEQLPSTDRPKTKP 128
Query: 484 ---------GVDLMTADGLFFLGYEIVTASSD---SDPETAVRVVLEMARAMGPQGGVVE 627
G++L+T DG+F GYE++ S D ++ + +RV++EM RAMG Q G+V+
Sbjct: 129 KPGPMAYSPGIELLTGDGIFAFGYELLAKSMDPAQNNSDRVLRVIVEMTRAMGSQ-GMVD 187
Query: 628 GQ----LMMMNMS----------EGGGEDCWA 681
GQ LM+ S EGG C A
Sbjct: 188 GQYHEILMLCKQSRYYNYVCEKKEGGFHACGA 219
>ref|XP_019196842.1| PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase
small subunit, chloroplastic-like [Ipomoea nil]
Length = 283
Score = 110 bits (276), Expect = 2e-25
Identities = 64/147 (43%), Positives = 85/147 (57%), Gaps = 22/147 (14%)
Frame = +1
Query: 241 WASLTSEINAQIIKHLPKTPPPAVTDPMRRLIAAAPPSVASALCLAACELVGGEKSHAMR 420
WAS+ ++I A + K LP PP +V +P+R L AAP + A ALC+AACEL GG++ AM
Sbjct: 42 WASIEADIEAHLKKALPVRPPASVFEPLRYLALAAPRTTAPALCVAACELFGGDREQAMD 101
Query: 421 AACAVQLMHAAAHAHT-LPCRSGV-----------------DLMTADGLFFLGYEIVTAS 546
AA A+ LMHAA HAH LP SGV +L+T D L G E++ S
Sbjct: 102 AASAIHLMHAATHAHRHLPLSSGVVGAKASEPVYHKFGPNIELLTGDALIPFGLELLARS 161
Query: 547 SD----SDPETAVRVVLEMARAMGPQG 615
D +P+ VRV++E+ RA G QG
Sbjct: 162 MDYPTRINPDKIVRVIIEITRATGSQG 188
>gb|ALT07955.1| putative geranyl diphosphate synthase small subunit type I
[Leucosceptrum canum]
Length = 302
Score = 111 bits (277), Expect = 2e-25
Identities = 67/151 (44%), Positives = 90/151 (59%), Gaps = 20/151 (13%)
Frame = +1
Query: 241 WASLTSEINAQIIKHLPKTPPPAVTDPMRRLIAAAPPSVASALCLAACELVGGEKSHAMR 420
WAS+ +EI+ + K LP PP +V +PM L AAP + ASALC+AACELVGG+ S AM
Sbjct: 41 WASIDAEIDTYLKKALPIRPPESVFEPMHHLTFAAPRTTASALCVAACELVGGDPSLAMV 100
Query: 421 AACAVQLMHAAAHAHT-LPCRS----------------GVDLMTADGLFFLGYEIVTASS 549
AA A+ LMHAAA+ H LP ++L+T DG+ G E++ S
Sbjct: 101 AASAIHLMHAAAYTHQHLPLTDRPRPKSEPTVQHKYGPNIELLTGDGIIPFGLELLARSV 160
Query: 550 D---SDPETAVRVVLEMARAMGPQGGVVEGQ 633
D S+P +RV++E+ RA G Q GVV+GQ
Sbjct: 161 DSARSNPTRILRVIMEITRASGSQ-GVVDGQ 190
>gb|ABR15421.1| geranyl pyrophosphate synthase small subunit [Mentha canadensis]
Length = 313
Score = 111 bits (277), Expect = 2e-25
Identities = 62/151 (41%), Positives = 89/151 (58%), Gaps = 21/151 (13%)
Frame = +1
Query: 226 QATDSWASLTSEINAQIIKHLPKTPPPAVTDPMRRLIAAAPPSVASALCLAACELVGGEK 405
Q+ WA++ ++I+ + K + PP V PM L AAP + ASALCLAACELVGG++
Sbjct: 47 QSQPYWAAIEADIDRYLKKSITIRPPETVFGPMHHLTFAAPATAASALCLAACELVGGDR 106
Query: 406 SHAMRAACAVQLMHAAAHAHT-LPCRSG----------------VDLMTADGLFFLGYEI 534
S AM AA A+ L+HAAA+ H LP G V+L+T DG+ G+E+
Sbjct: 107 SQAMAAAAAIHLVHAAAYVHEHLPLTDGSRPVSKPAIQHKYGPNVELLTGDGIVPFGFEL 166
Query: 535 VTASSD----SDPETAVRVVLEMARAMGPQG 615
+ S D DP+ +RV++E++RA GP+G
Sbjct: 167 LAGSVDPARTDDPDRILRVIIEISRAGGPEG 197
>gb|ABW86880.1| geranyl pyrophosphate synthase small subunit [Mentha x piperita]
Length = 313
Score = 111 bits (277), Expect = 2e-25
Identities = 62/151 (41%), Positives = 89/151 (58%), Gaps = 21/151 (13%)
Frame = +1
Query: 226 QATDSWASLTSEINAQIIKHLPKTPPPAVTDPMRRLIAAAPPSVASALCLAACELVGGEK 405
Q+ WA++ ++I+ + K + PP V PM L AAP + ASALCLAACELVGG++
Sbjct: 47 QSQPYWAAIEADIDRYLKKSITIRPPETVFGPMHHLTFAAPATAASALCLAACELVGGDR 106
Query: 406 SHAMRAACAVQLMHAAAHAHT-LPCRSG----------------VDLMTADGLFFLGYEI 534
S AM AA A+ L+HAAA+ H LP G V+L+T DG+ G+E+
Sbjct: 107 SQAMAAAAAIHLVHAAAYVHEHLPLTDGSRPVSKPAIQHKYGPNVELLTGDGIVPFGFEL 166
Query: 535 VTASSD----SDPETAVRVVLEMARAMGPQG 615
+ S D DP+ +RV++E++RA GP+G
Sbjct: 167 LAGSVDPARTDDPDRILRVIIEISRAGGPEG 197
>ref|XP_011007747.1| PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase
small subunit, chloroplastic-like [Populus euphratica]
Length = 312
Score = 110 bits (276), Expect = 3e-25
Identities = 71/179 (39%), Positives = 100/179 (55%), Gaps = 15/179 (8%)
Frame = +1
Query: 124 PSKSINLPLLSSKFSKKPTTLLKITNVLNYQNQRQATDSWASLTSEINAQIIKHLPKTPP 303
P + N PLLS + P T+ +T N ++ W S+ EI+A + + +P PP
Sbjct: 21 PRSNTNRPLLSHR----PMTVA-VTATSNGTTYNKSY--WTSVNDEIDAHLKQAIPIRPP 73
Query: 304 PAVTDPMRRLIAAAPPSVASALCLAACELVGGEKSHAMRAACAVQLMHAAA--HAHTLPC 477
V +PM L AAP S A ALC+AACELVGG + AM AACA++LMHAAA H H L
Sbjct: 74 LLVFEPMHHLTFAAPRSAAPALCVAACELVGGNRDQAMAAACALRLMHAAAFTHEHILST 133
Query: 478 ----------RSGVDLMTADGLFFLGYEIVTASSD---SDPETAVRVVLEMARAMGPQG 615
S ++L+T DG+ G E++ S D ++ E +RV++E+ +AMG QG
Sbjct: 134 GNRARIGHSFGSNIELLTGDGMLPFGLELLAKSDDLTQNNSERILRVIVEITQAMGSQG 192
>ref|XP_007142292.1| hypothetical protein PHAVU_008G268200g [Phaseolus vulgaris]
gb|ESW14286.1| hypothetical protein PHAVU_008G268200g [Phaseolus vulgaris]
Length = 274
Score = 109 bits (273), Expect = 4e-25
Identities = 68/158 (43%), Positives = 93/158 (58%), Gaps = 6/158 (3%)
Frame = +1
Query: 241 WASLTSEINAQIIKHLPKTPPPAVTDPMRRLIAAAPPSVASALCLAACELVGGEKSHAMR 420
WASL ++I A + + +P P V +PM RL AAP S A ALCLAACELVGG++ HAM
Sbjct: 41 WASLQADIEAYLKRTIPLKEPLEVYEPMHRLAFAAPRSAAPALCLAACELVGGQRRHAMD 100
Query: 421 AACAVQLMHAAAHAHTLPCR---SGVDLMTADGLFFLGYEIVTASS---DSDPETAVRVV 582
AA A+ L A AHAH + S V L+T DG+ G+E++ + PE +RV+
Sbjct: 101 AAAALLLNLANAHAHEEIGQGEGSNVALLTGDGIVPFGFELLARGAGPGSGSPERVMRVI 160
Query: 583 LEMARAMGPQGGVVEGQLMMMNMSEGGGEDCWAWERKG 696
+E++RA+G GG+++ L M EG GE KG
Sbjct: 161 IEISRAVG-SGGLID-SLQMKKSVEGEGESVKRVVEKG 196
>gb|AAS82859.1| geranyl diphosphate synthase small subunit [Antirrhinum majus]
Length = 297
Score = 109 bits (273), Expect = 6e-25
Identities = 69/195 (35%), Positives = 108/195 (55%), Gaps = 18/195 (9%)
Frame = +1
Query: 127 SKSINLPLLSSKFSKKPTTLLKITNVLNYQNQRQATDSWASLTSEINAQIIKHLPKTPPP 306
+KS P ++ + +P+T I + Q R A++ S+I + + K +P P
Sbjct: 10 TKSGLFPSITKSKTTRPSTRPVILAMTRTQTYR------ATIESDIESYLKKAIPIRAPE 63
Query: 307 AVTDPMRRLIAAAPPSVASALCLAACELVGGEKSHAMRAACAVQLMHAAAHAH-TLPCRS 483
+V +PM L AAP + ASALC+AACELVGG++S AM AA AV LMH AA+ H LP
Sbjct: 64 SVFEPMHHLTFAAPRTSASALCVAACELVGGDRSDAMAAAAAVHLMHVAAYTHENLPLTD 123
Query: 484 G--------------VDLMTADGLFFLGYEIVTASSD---SDPETAVRVVLEMARAMGPQ 612
G ++L+T DG+ G E++ S D ++P+ +R ++E+ R MG +
Sbjct: 124 GPMSKSEIQHKFDPNIELLTGDGIIPFGLELMARSMDPTRNNPDRILRAIIELTRVMGSE 183
Query: 613 GGVVEGQLMMMNMSE 657
G+VEGQ + +++
Sbjct: 184 -GIVEGQYHELGLNQ 197
>pdb|3OAB|B Chain B, Mint deletion mutant of heterotetrameric geranyl
pyrophosphate synthase in complex with ligands
pdb|3OAB|C Chain C, Mint deletion mutant of heterotetrameric geranyl
pyrophosphate synthase in complex with ligands
pdb|3OAC|B Chain B, Mint deletion mutant of heterotetrameric geranyl
pyrophosphate synthase in complex with ligands
pdb|3OAC|C Chain C, Mint deletion mutant of heterotetrameric geranyl
pyrophosphate synthase in complex with ligands
Length = 264
Score = 108 bits (271), Expect = 6e-25
Identities = 59/136 (43%), Positives = 84/136 (61%), Gaps = 11/136 (8%)
Frame = +1
Query: 241 WASLTSEINAQIIKHLPKTPPPAVTDPMRRLIAAAPPSVASALCLAACELVGGEKSHAMR 420
WA++ ++I + K + PP V PM L AAP + AS LCLAACELVGG++S AM
Sbjct: 5 WAAIEADIERYLKKSITIRPPETVFGPMHHLTFAAPATAASTLCLAACELVGGDRSQAMA 64
Query: 421 AACAVQLMHAAAHAHT-LP------CRSGVDLMTADGLFFLGYEIVTASSD----SDPET 567
AA A+ L+HAAA+ H LP V+L+T DG+ G+E++ S D DP+
Sbjct: 65 AAAAIHLVHAAAYVHEHLPPAIQHKYGPNVELLTGDGIVPFGFELLAGSVDPARTDDPDR 124
Query: 568 AVRVVLEMARAMGPQG 615
+RV++E++RA GP+G
Sbjct: 125 ILRVIIEISRAGGPEG 140
>pdb|3KRA|B Chain B, Mint heterotetrameric geranyl pyrophosphate synthase in
complex with magnesium
pdb|3KRA|C Chain C, Mint heterotetrameric geranyl pyrophosphate synthase in
complex with magnesium
pdb|3KRC|B Chain B, Mint heterotetrameric geranyl pyrophosphate synthase in
complex with IPP
pdb|3KRC|C Chain C, Mint heterotetrameric geranyl pyrophosphate synthase in
complex with IPP
pdb|3KRF|B Chain B, Mint heterotetrameric geranyl pyrophosphate synthase in
complex with magnesium, IPP, and DMASPP (I)
pdb|3KRF|C Chain C, Mint heterotetrameric geranyl pyrophosphate synthase in
complex with magnesium, IPP, and DMASPP (I)
pdb|3KRO|B Chain B, Mint heterotetrameric geranyl pyrophosphate synthase in
complex with magnesium, IPP, and DMASPP (II)
pdb|3KRO|C Chain C, Mint heterotetrameric geranyl pyrophosphate synthase in
complex with magnesium, IPP, and DMASPP (II)
pdb|3KRP|B Chain B, Mint heterotetrameric geranyl pyrophosphate synthase in
complex with magnesium and GPP
pdb|3KRP|C Chain C, Mint heterotetrameric geranyl pyrophosphate synthase in
complex with magnesium and GPP
Length = 274
Score = 108 bits (270), Expect = 1e-24
Identities = 60/146 (41%), Positives = 85/146 (58%), Gaps = 21/146 (14%)
Frame = +1
Query: 241 WASLTSEINAQIIKHLPKTPPPAVTDPMRRLIAAAPPSVASALCLAACELVGGEKSHAMR 420
WA++ ++I + K + PP V PM L AAP + AS LCLAACELVGG++S AM
Sbjct: 5 WAAIEADIERYLKKSITIRPPETVFGPMHHLTFAAPATAASTLCLAACELVGGDRSQAMA 64
Query: 421 AACAVQLMHAAAHAHT-LPCRSG----------------VDLMTADGLFFLGYEIVTASS 549
AA A+ L+HAAA+ H LP G V+L+T DG+ G+E++ S
Sbjct: 65 AAAAIHLVHAAAYVHEHLPLTDGSRPVSKPAIQHKYGPNVELLTGDGIVPFGFELLAGSV 124
Query: 550 D----SDPETAVRVVLEMARAMGPQG 615
D DP+ +RV++E++RA GP+G
Sbjct: 125 DPARTDDPDRILRVIIEISRAGGPEG 150
>gb|AAF08792.1|AF182827_1 geranyl diphosphate synthase small subunit [Mentha x piperita]
emb|CAC10560.1| gpp synthase small subunit [Mentha x piperita]
Length = 313
Score = 109 bits (272), Expect = 1e-24
Identities = 61/151 (40%), Positives = 87/151 (57%), Gaps = 21/151 (13%)
Frame = +1
Query: 226 QATDSWASLTSEINAQIIKHLPKTPPPAVTDPMRRLIAAAPPSVASALCLAACELVGGEK 405
Q+ WA++ ++I + K + PP V PM L AAP + AS LCLAACELVGG++
Sbjct: 47 QSQPYWAAIEADIERYLKKSITIRPPETVFGPMHHLTFAAPATAASTLCLAACELVGGDR 106
Query: 406 SHAMRAACAVQLMHAAAHAHT-LPCRSG----------------VDLMTADGLFFLGYEI 534
S AM AA A+ L+HAAA+ H LP G V+L+T DG+ G+E+
Sbjct: 107 SQAMAAAAAIHLVHAAAYVHEHLPLTDGSRPVSKPAIQHKYGPNVELLTGDGIVPFGFEL 166
Query: 535 VTASSD----SDPETAVRVVLEMARAMGPQG 615
+ S D DP+ +RV++E++RA GP+G
Sbjct: 167 LAGSVDPARTDDPDRILRVIIEISRAGGPEG 197
>ref|XP_021606317.1| geranylgeranyl pyrophosphate synthase 11, chloroplastic-like
isoform X2 [Manihot esculenta]
gb|OAY55135.1| hypothetical protein MANES_03G130300 [Manihot esculenta]
Length = 296
Score = 108 bits (271), Expect = 1e-24
Identities = 64/173 (36%), Positives = 98/173 (56%), Gaps = 20/173 (11%)
Frame = +1
Query: 241 WASLTSEINAQIIKHLPKTPPPAVTDPMRRLIAAAPPSVASALCLAACELVGGEKSHAMR 420
W+S+ ++I+A + K +P PP V +PMR L +AP + A ALC+AACELVGG + A+
Sbjct: 45 WSSVNADIDAHLNKSIPSKPPLVVFEPMRHLTFSAPQTTAPALCIAACELVGGHRDQAIA 104
Query: 421 AACAVQLMHAAAHAH-TLPCRS------------GVDLMTADGLFFLGYEIVTASSDSDP 561
AA A+ LMHA+A H LP + L+ ADG+ G+E++ A +D++
Sbjct: 105 AASALHLMHASAFTHENLPLTERPKPTFDHTYGPNIRLLMADGMIAFGFELL-ARADNNS 163
Query: 562 ETAVRVVLEMARAMGPQGGVVEGQLMMMNMSEGGGEDCW--AW-----ERKGG 699
+R ++E++RAMG Q GV+ GQ + E G + + W +KGG
Sbjct: 164 NRVLRAIIEISRAMGTQ-GVMAGQYNESQLGESDGTEAFHVGWLHNVCSKKGG 215
>ref|XP_021606316.1| geranylgeranyl pyrophosphate synthase 11, chloroplastic-like
isoform X1 [Manihot esculenta]
Length = 307
Score = 108 bits (271), Expect = 1e-24
Identities = 64/173 (36%), Positives = 98/173 (56%), Gaps = 20/173 (11%)
Frame = +1
Query: 241 WASLTSEINAQIIKHLPKTPPPAVTDPMRRLIAAAPPSVASALCLAACELVGGEKSHAMR 420
W+S+ ++I+A + K +P PP V +PMR L +AP + A ALC+AACELVGG + A+
Sbjct: 45 WSSVNADIDAHLNKSIPSKPPLVVFEPMRHLTFSAPQTTAPALCIAACELVGGHRDQAIA 104
Query: 421 AACAVQLMHAAAHAH-TLPCRS------------GVDLMTADGLFFLGYEIVTASSDSDP 561
AA A+ LMHA+A H LP + L+ ADG+ G+E++ A +D++
Sbjct: 105 AASALHLMHASAFTHENLPLTERPKPTFDHTYGPNIRLLMADGMIAFGFELL-ARADNNS 163
Query: 562 ETAVRVVLEMARAMGPQGGVVEGQLMMMNMSEGGGEDCW--AW-----ERKGG 699
+R ++E++RAMG Q GV+ GQ + E G + + W +KGG
Sbjct: 164 NRVLRAIIEISRAMGTQ-GVMAGQYNESQLGESDGTEAFHVGWLHNVCSKKGG 215
>gb|PIA57840.1| hypothetical protein AQUCO_00500036v1 [Aquilegia coerulea]
Length = 317
Score = 108 bits (271), Expect = 2e-24
Identities = 68/192 (35%), Positives = 99/192 (51%), Gaps = 24/192 (12%)
Frame = +1
Query: 238 SWASLTSEINAQIIKHLPKTPPPAVTDPMRRLIAAAPPSVASALCLAACELVGGEKSHAM 417
SWA++ SE+ + I + L PP V DPM LI P S+A ALC+AACE VGG+K A+
Sbjct: 43 SWATINSEVESHIEQALSGRQPPMVFDPMNHLIFEVPRSMAPALCIAACEAVGGQKEQAI 102
Query: 418 RAACAVQLMHAAAHAH---------TLPCRS------GVDLMTADGLFFLGYEIVTASSD 552
AA A+ LMH A + H +P S ++L+TAD + GYE++ A D
Sbjct: 103 PAASALHLMHVATYTHEYLQLSDKSMVPTMSHHGLEPSIELLTADSMIPFGYELLAAMED 162
Query: 553 ---SDPETAVRVVLEMARAMGPQGGVVEGQLMMMNMSEGGGEDC------WAWERKGGRM 705
+ E+ ++V++E+ RAMG QG + L + G E C +E+KGG +
Sbjct: 163 PANKNSESVLQVMIEIGRAMGSQGMINGQYLKFRCLGLDGEEPCEEGVMDQVFEKKGGGL 222
Query: 706 XXXXXXXXXIVG 741
I+G
Sbjct: 223 YSCGAACGAILG 234
>gb|PLY85123.1| hypothetical protein LSAT_9X93420 [Lactuca sativa]
Length = 281
Score = 107 bits (268), Expect = 2e-24
Identities = 63/158 (39%), Positives = 93/158 (58%), Gaps = 15/158 (9%)
Frame = +1
Query: 241 WASLTSEINAQIIKHLPKTPPPAVTDPMRRLIAAAPPSVASALCLAACELVGGEKSHAMR 420
W S+ S+I+ + K LP P +V +PM L+ A P + ASALC+AACELVGG + A+
Sbjct: 42 WDSIHSDIDFHLKKALPIREPISVFEPMHHLVFAPPKTTASALCVAACELVGGNREDAIV 101
Query: 421 AACAVQLMHAAAHAH----------TLPCRSG--VDLMTADGLFFLGYEIVTASSD---S 555
AA A+ LMHAA + H P R G ++L+T DG+F G+E++ AS D
Sbjct: 102 AASAIHLMHAAIYTHDHLMLTDSDQKTPHRFGPNIELLTGDGIFPFGFELLAASMDPAGD 161
Query: 556 DPETAVRVVLEMARAMGPQGGVVEGQLMMMNMSEGGGE 669
+ + +RV++E+ RA G Q G+V GQ + + GG+
Sbjct: 162 NSDKILRVIIEITRAAGLQ-GIVNGQDSDVEFDQSGGQ 198
>ref|XP_023764268.1| heterodimeric geranylgeranyl pyrophosphate synthase small subunit,
chloroplastic-like [Lactuca sativa]
Length = 294
Score = 107 bits (268), Expect = 3e-24
Identities = 63/158 (39%), Positives = 93/158 (58%), Gaps = 15/158 (9%)
Frame = +1
Query: 241 WASLTSEINAQIIKHLPKTPPPAVTDPMRRLIAAAPPSVASALCLAACELVGGEKSHAMR 420
W S+ S+I+ + K LP P +V +PM L+ A P + ASALC+AACELVGG + A+
Sbjct: 55 WDSIHSDIDFHLKKALPIREPISVFEPMHHLVFAPPKTTASALCVAACELVGGNREDAIV 114
Query: 421 AACAVQLMHAAAHAH----------TLPCRSG--VDLMTADGLFFLGYEIVTASSD---S 555
AA A+ LMHAA + H P R G ++L+T DG+F G+E++ AS D
Sbjct: 115 AASAIHLMHAAIYTHDHLMLTDSDQKTPHRFGPNIELLTGDGIFPFGFELLAASMDPAGD 174
Query: 556 DPETAVRVVLEMARAMGPQGGVVEGQLMMMNMSEGGGE 669
+ + +RV++E+ RA G Q G+V GQ + + GG+
Sbjct: 175 NSDKILRVIIEITRAAGLQ-GIVNGQDSDVEFDQSGGQ 211
>ref|XP_017429744.1| PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase
small subunit, chloroplastic-like [Vigna angularis]
gb|KOM46526.1| hypothetical protein LR48_Vigan07g023000 [Vigna angularis]
dbj|BAT80708.1| hypothetical protein VIGAN_03030600 [Vigna angularis var.
angularis]
Length = 272
Score = 107 bits (266), Expect = 4e-24
Identities = 62/145 (42%), Positives = 90/145 (62%), Gaps = 6/145 (4%)
Frame = +1
Query: 241 WASLTSEINAQIIKHLPKTPPPAVTDPMRRLIAAAPPSVASALCLAACELVGGEKSHAMR 420
WASL ++I A + + +P P V +PMRRLI AP + ALCLAACELVGG++ AM
Sbjct: 41 WASLQADIEAHLKQAIPIKEPLEVFEPMRRLIFDAPRTTVPALCLAACELVGGQRDQAMD 100
Query: 421 AACAVQLMHAAAHAH-TLPCRSG--VDLMTADGLFFLGYEIVTAS---SDSDPETAVRVV 582
AA A+ L A AH H L R G + L+T DG+ LG+E++ + + PE +RV+
Sbjct: 101 AAAALLLNLANAHVHEELGVREGSNIALLTGDGIVPLGFELLASGDGPGSASPERVMRVI 160
Query: 583 LEMARAMGPQGGVVEGQLMMMNMSE 657
+E++RA+G GG+++ Q M + E
Sbjct: 161 IEISRAVG-SGGLIDSQHMKKTLEE 184
>pdb|3QKC|B Chain B, Crystal Structure Of Geranyl Diphosphate Synthase Small
Subunit From Antirrhinum Majus
pdb|3QKC|A Chain A, Crystal Structure Of Geranyl Diphosphate Synthase Small
Subunit From Antirrhinum Majus
Length = 273
Score = 107 bits (266), Expect = 4e-24
Identities = 61/156 (39%), Positives = 93/156 (59%), Gaps = 18/156 (11%)
Frame = +1
Query: 244 ASLTSEINAQIIKHLPKTPPPAVTDPMRRLIAAAPPSVASALCLAACELVGGEKSHAMRA 423
A++ S+I + + K +P P +V +PM L AAP + ASALC+AACELVGG++S AM A
Sbjct: 11 ATIESDIESYLKKAIPIRAPESVFEPMHHLTFAAPRTSASALCVAACELVGGDRSDAMAA 70
Query: 424 ACAVQLMHAAAHAH-TLPCRSG--------------VDLMTADGLFFLGYEIVTASSD-- 552
A AV LMH AA+ H LP G ++L+T DG+ G E++ S D
Sbjct: 71 AAAVHLMHVAAYTHENLPLTDGPMSKSEIQHKFDPNIELLTGDGIIPFGLELMARSMDPT 130
Query: 553 -SDPETAVRVVLEMARAMGPQGGVVEGQLMMMNMSE 657
++P+ +R ++E+ R MG + G+VEGQ + +++
Sbjct: 131 RNNPDRILRAIIELTRVMGSE-GIVEGQYHELGLNQ 165