BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00036713
         (529 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_006576506.2| RNA-dependent RNA polymerase [Persimmon viru...   305   5e-93
ref|YP_009300875.1| RNA-dependent RNA polymerase [Wuhan Insect v...   236   1e-68
gb|AAG00838.1| large protein, partial [Strawberry crinkle virus]      222   8e-68
ref|YP_425092.1| RNA-dependent RNA polymerase [Lettuce necrotic ...   231   6e-67
gb|AAQ97579.1| L protein, partial [Strawberry crinkle virus]          222   6e-67
gb|AAQ97578.1| L protein, partial [Strawberry crinkle virus]          222   6e-67
gb|AAQ97581.1| L protein, partial [Strawberry crinkle virus]          222   9e-67
gb|AAQ97582.1| L protein, partial [Strawberry crinkle virus]          222   9e-67
gb|AAQ97583.1| L protein, partial [Strawberry crinkle virus]          222   9e-67
gb|AIG59921.1| L protein, partial [Strawberry crinkle virus]          222   4e-66
gb|AAQ97580.1| L protein, partial [Strawberry crinkle virus]          219   1e-65
gb|AAP03645.2| putative RNA-dependent RNA polymerase, partial [S...   222   3e-65
ref|YP_009301361.1| RNA-dependent RNA polymerase [Wuhan Insect v...   226   3e-65
ref|YP_009177021.1| polymerase protein [Alfalfa dwarf virus] >gi...   223   2e-64
ref|YP_002308376.1| L protein [Lettuce yellow mottle virus] >gi|...   222   5e-64
ref|YP_009352236.1| L protein [Tomato yellow mottle-associated v...   221   2e-63
gb|ATS17313.1| RNA-dependent RNA polymerase [Cabbage cytorhabdov...   213   1e-60
gb|ADA68872.1| L protein, partial [Ivy vein banding virus]            200   3e-60
emb|CBL76312.2| RNA-dependent RNA polymerase, partial [Raspberry...   210   6e-60
gb|ADA68871.1| L protein, partial [Ivy vein banding virus]            198   2e-59

>ref|YP_006576506.2| RNA-dependent RNA polymerase [Persimmon virus A]
 dbj|BAM36035.2| RNA-dependent RNA polymerase [Persimmon virus A]
          Length = 2089

 Score =  305 bits (782), Expect = 5e-93
 Identities = 142/176 (80%), Positives = 157/176 (89%)
 Frame = -2

Query: 528  KTYSIAKRQSRTMRTIGQDKLWVSRTVCLSLDFEKWNGHMRKESTAPIFTCLGDLFGMEN 349
            KTYSIA+RQS T++   + KLW SRTVC+SLDFEKWNGHMRKEST PIFTCLGDLFGM+ 
Sbjct: 552  KTYSIARRQSPTLKLPSKGKLWASRTVCMSLDFEKWNGHMRKESTEPIFTCLGDLFGMKE 611

Query: 348  LYNVTYDLFSQSFLYLADGSYIPDIKRGELVEEGSLSFSGHQGGMEGLRQKGWTIFTVCC 169
            LYNVTYDLFS+S+LYLADGSY+P +K GEL+EEG+LSFSGH+GGMEGLRQKGWTIFTVCC
Sbjct: 612  LYNVTYDLFSESYLYLADGSYVPIVKNGELIEEGTLSFSGHKGGMEGLRQKGWTIFTVCC 671

Query: 168  LDMVCSKYNCTYKIMGMGDNQVLQVTVFTYSVDGAGEPTQKGKIEMATIINELFSD 1
            LDM+CSKYNCTYKIMGMGDNQVLQ+TVFTYSVDGAG  T KGK EM  II  LF D
Sbjct: 672  LDMICSKYNCTYKIMGMGDNQVLQITVFTYSVDGAGVATDKGKREMRGIIYTLFDD 727


>ref|YP_009300875.1| RNA-dependent RNA polymerase [Wuhan Insect virus 5]
 gb|AJG39185.1| RNA-dependent RNA polymerase [Wuhan Insect virus 5]
          Length = 2098

 Score =  236 bits (601), Expect = 1e-68
 Identities = 109/176 (61%), Positives = 133/176 (75%)
 Frame = -2

Query: 528  KTYSIAKRQSRTMRTIGQDKLWVSRTVCLSLDFEKWNGHMRKESTAPIFTCLGDLFGMEN 349
            K YS  K QS       ++K W S+TVC+SLDFEKWNGHMR EST  +F  LG+LFG+ N
Sbjct: 550  KLYSTVKPQSDGASVRRRNKTWTSKTVCISLDFEKWNGHMRYESTYHVFKALGELFGLPN 609

Query: 348  LYNVTYDLFSQSFLYLADGSYIPDIKRGELVEEGSLSFSGHQGGMEGLRQKGWTIFTVCC 169
            LYN TY++F +S +YLADGSY+P     E++ E  LSF+GH+GGMEGLRQKGWTIFTVC 
Sbjct: 610  LYNRTYEIFQESLIYLADGSYLPRYSGNEMIMEEPLSFTGHKGGMEGLRQKGWTIFTVCG 669

Query: 168  LDMVCSKYNCTYKIMGMGDNQVLQVTVFTYSVDGAGEPTQKGKIEMATIINELFSD 1
            L+MVCSKYNCTYKIMGMGDNQVLQ+T++TY V  +GE T+ G  EM   +  LF+D
Sbjct: 670  LNMVCSKYNCTYKIMGMGDNQVLQITLYTYKVAASGEATEAGSYEMKLTLESLFAD 725


>gb|AAG00838.1| large protein, partial [Strawberry crinkle virus]
          Length = 454

 Score =  222 bits (566), Expect = 8e-68
 Identities = 99/174 (56%), Positives = 129/174 (74%)
 Frame = -2

Query: 528 KTYSIAKRQSRTMRTIGQDKLWVSRTVCLSLDFEKWNGHMRKESTAPIFTCLGDLFGMEN 349
           K YS  + QS   +  G D+ W S+ +C+SLDFEKWNGHMRKE T  +FT +GDLFGM  
Sbjct: 117 KMYSTVRHQSVLNKKRGSDRTWASKVICMSLDFEKWNGHMRKEMTLGVFTPIGDLFGMTE 176

Query: 348 LYNVTYDLFSQSFLYLADGSYIPDIKRGELVEEGSLSFSGHQGGMEGLRQKGWTIFTVCC 169
           LYNVTYD+FS+ + YLADG+Y+PDI +G+L+     SF  HQGGMEGLRQKGWTIFTVC 
Sbjct: 177 LYNVTYDIFSECYYYLADGTYVPDIHKGDLLVSEPFSFQNHQGGMEGLRQKGWTIFTVCA 236

Query: 168 LDMVCSKYNCTYKIMGMGDNQVLQVTVFTYSVDGAGEPTQKGKIEMATIINELF 7
           L++V S+Y+CTY+IMGMGDNQVLQ+T++T  ++  G  + +G  EM   +  +F
Sbjct: 237 LEVVLSQYDCTYRIMGMGDNQVLQITLYTGKLNDDGSASDEGLSEMKETMRRIF 290


>ref|YP_425092.1| RNA-dependent RNA polymerase [Lettuce necrotic yellows virus]
 sp|Q4W382.1|L_LNYV3 RecName: Full=RNA-directed RNA polymerase L; Short=Protein L;
            AltName: Full=Large structural protein; AltName:
            Full=Replicase; AltName: Full=Transcriptase; Includes:
            RecName: Full=RNA-directed RNA polymerase; Includes:
            RecName: Full=mRNA (guanine-N(7)-)-methyltransferase;
            Includes: RecName: Full=GDP
            polyribonucleotidyltransferase; Includes: RecName:
            Full=Cap-specific mRNA
            (nucleoside-2'-O-)-methyltransferase 2
 emb|CAG34091.1| putative polymerase [Lettuce necrotic yellows virus]
 emb|CAI30426.1| RNA-dependent RNA polymerase [Lettuce necrotic yellows virus]
          Length = 2068

 Score =  231 bits (588), Expect = 6e-67
 Identities = 108/177 (61%), Positives = 135/177 (76%), Gaps = 1/177 (0%)
 Frame = -2

Query: 528  KTYSIAKRQSRTMRTIGQDKLWVSRTVCLSLDFEKWNGHMRKESTAPIFTCLGDLFGMEN 349
            KTYS  K Q+  +R  G   L+ ++TVC+SLDFEKWNGHMRKEST  +F  LGDLFGMEN
Sbjct: 542  KTYSTVKNQAAKIRRSGA--LYDTKTVCMSLDFEKWNGHMRKESTFHVFEALGDLFGMEN 599

Query: 348  LYNVTYDLFSQSFLYLADGSYIPDIK-RGELVEEGSLSFSGHQGGMEGLRQKGWTIFTVC 172
            LYN TYD+F  S+ YLADGSY+P +  +G    E   SF+GH+GG EGLRQKGWTIFTV 
Sbjct: 600  LYNETYDIFKDSYFYLADGSYVPSMDAQGNFTPEPPYSFTGHKGGQEGLRQKGWTIFTVV 659

Query: 171  CLDMVCSKYNCTYKIMGMGDNQVLQVTVFTYSVDGAGEPTQKGKIEMATIINELFSD 1
            CLD +C K+NCTYKIMGMGDNQVLQ+T++TY VD +G+ T++G+ +M  ++  LF D
Sbjct: 660  CLDWICRKHNCTYKIMGMGDNQVLQLTMYTYRVDASGKATERGREDMRRVLFGLFDD 716


>gb|AAQ97579.1| L protein, partial [Strawberry crinkle virus]
          Length = 546

 Score =  222 bits (566), Expect = 6e-67
 Identities = 99/174 (56%), Positives = 129/174 (74%)
 Frame = -2

Query: 528 KTYSIAKRQSRTMRTIGQDKLWVSRTVCLSLDFEKWNGHMRKESTAPIFTCLGDLFGMEN 349
           K YS  + QS   +  G D+ W S+ +C+SLDFEKWNGHMRKE T  +FT +GDLFGM  
Sbjct: 345 KMYSTVRHQSVLNKKRGSDRTWASKVICMSLDFEKWNGHMRKEMTLGVFTPIGDLFGMTE 404

Query: 348 LYNVTYDLFSQSFLYLADGSYIPDIKRGELVEEGSLSFSGHQGGMEGLRQKGWTIFTVCC 169
           LYNVTYD+FS+ + YLADG+Y+PDI +G+L+     SF  HQGGMEGLRQKGWTIFTVC 
Sbjct: 405 LYNVTYDIFSECYYYLADGTYVPDIHKGDLLVSEPFSFQNHQGGMEGLRQKGWTIFTVCA 464

Query: 168 LDMVCSKYNCTYKIMGMGDNQVLQVTVFTYSVDGAGEPTQKGKIEMATIINELF 7
           L++V S+Y+CTY+IMGMGDNQVLQ+T++T  ++  G  + +G  EM   +  +F
Sbjct: 465 LEVVLSQYDCTYRIMGMGDNQVLQITLYTGKLNDDGSASDEGLSEMKETMRRIF 518


>gb|AAQ97578.1| L protein, partial [Strawberry crinkle virus]
          Length = 546

 Score =  222 bits (566), Expect = 6e-67
 Identities = 99/174 (56%), Positives = 129/174 (74%)
 Frame = -2

Query: 528 KTYSIAKRQSRTMRTIGQDKLWVSRTVCLSLDFEKWNGHMRKESTAPIFTCLGDLFGMEN 349
           K YS  + QS   +  G D+ W S+ +C+SLDFEKWNGHMRKE T  +FT +GDLFGM  
Sbjct: 345 KMYSTVRHQSVLNKKRGSDRTWASKVICMSLDFEKWNGHMRKEMTLGVFTPIGDLFGMTE 404

Query: 348 LYNVTYDLFSQSFLYLADGSYIPDIKRGELVEEGSLSFSGHQGGMEGLRQKGWTIFTVCC 169
           LYNVTYD+FS+ + YLADG+Y+PDI +G+L+     SF  HQGGMEGLRQKGWTIFTVC 
Sbjct: 405 LYNVTYDIFSECYYYLADGTYVPDIHKGDLLVSEPFSFQNHQGGMEGLRQKGWTIFTVCA 464

Query: 168 LDMVCSKYNCTYKIMGMGDNQVLQVTVFTYSVDGAGEPTQKGKIEMATIINELF 7
           L++V S+Y+CTY+IMGMGDNQVLQ+T++T  ++  G  + +G  EM   +  +F
Sbjct: 465 LEVVLSQYDCTYRIMGMGDNQVLQITLYTGKLNDDGSASDEGLSEMKETMRRIF 518


>gb|AAQ97581.1| L protein, partial [Strawberry crinkle virus]
          Length = 546

 Score =  222 bits (565), Expect = 9e-67
 Identities = 98/174 (56%), Positives = 130/174 (74%)
 Frame = -2

Query: 528 KTYSIAKRQSRTMRTIGQDKLWVSRTVCLSLDFEKWNGHMRKESTAPIFTCLGDLFGMEN 349
           K YS  + QS   +  G D+ W S+ +C+SLDFEKWNGHMRKE T  +FT +GDLFGM  
Sbjct: 345 KMYSTVRHQSVLNKKRGSDRTWASKVICMSLDFEKWNGHMRKEMTLGVFTPIGDLFGMTE 404

Query: 348 LYNVTYDLFSQSFLYLADGSYIPDIKRGELVEEGSLSFSGHQGGMEGLRQKGWTIFTVCC 169
           LYNVTYD+FS+ + YLADG+Y+PDI +G+L+     SF  HQGGMEGLRQKGWT+FTVC 
Sbjct: 405 LYNVTYDIFSECYYYLADGTYVPDIHKGDLLVSEPFSFQNHQGGMEGLRQKGWTVFTVCA 464

Query: 168 LDMVCSKYNCTYKIMGMGDNQVLQVTVFTYSVDGAGEPTQKGKIEMATIINELF 7
           L++V S+Y+CTY+IMGMGDNQVLQ+T++T  ++  G  +++G  EM   +  +F
Sbjct: 465 LEVVLSQYDCTYRIMGMGDNQVLQITLYTGKLNEDGSASEEGLDEMKETMRRIF 518


>gb|AAQ97582.1| L protein, partial [Strawberry crinkle virus]
          Length = 546

 Score =  222 bits (565), Expect = 9e-67
 Identities = 98/174 (56%), Positives = 130/174 (74%)
 Frame = -2

Query: 528 KTYSIAKRQSRTMRTIGQDKLWVSRTVCLSLDFEKWNGHMRKESTAPIFTCLGDLFGMEN 349
           K YS  + QS   +  G D+ W S+ +C+SLDFEKWNGHMRKE T  +FT +GDLFGM  
Sbjct: 345 KMYSTVRHQSVLNKKRGSDRTWTSKVICMSLDFEKWNGHMRKEMTLGVFTPIGDLFGMTE 404

Query: 348 LYNVTYDLFSQSFLYLADGSYIPDIKRGELVEEGSLSFSGHQGGMEGLRQKGWTIFTVCC 169
           LYNVTYD+FS+ + YLADG+Y+PDI +G+L+     SF  HQGGMEGLRQKGWT+FTVC 
Sbjct: 405 LYNVTYDIFSECYYYLADGTYVPDIHKGDLLVSEPFSFQNHQGGMEGLRQKGWTVFTVCA 464

Query: 168 LDMVCSKYNCTYKIMGMGDNQVLQVTVFTYSVDGAGEPTQKGKIEMATIINELF 7
           L++V S+Y+CTY+IMGMGDNQVLQ+T++T  ++  G  +++G  EM   +  +F
Sbjct: 465 LEVVLSQYDCTYRIMGMGDNQVLQITLYTGKLNEDGSASEEGLDEMKETMRRIF 518


>gb|AAQ97583.1| L protein, partial [Strawberry crinkle virus]
          Length = 546

 Score =  222 bits (565), Expect = 9e-67
 Identities = 98/174 (56%), Positives = 130/174 (74%)
 Frame = -2

Query: 528 KTYSIAKRQSRTMRTIGQDKLWVSRTVCLSLDFEKWNGHMRKESTAPIFTCLGDLFGMEN 349
           K YS  + QS   +  G D+ W S+ +C+SLDFEKWNGHMRKE T  +FT +GDLFGM  
Sbjct: 345 KMYSTVRHQSVLNKKRGSDRTWASKVICMSLDFEKWNGHMRKEMTLGVFTPIGDLFGMTE 404

Query: 348 LYNVTYDLFSQSFLYLADGSYIPDIKRGELVEEGSLSFSGHQGGMEGLRQKGWTIFTVCC 169
           LYNVTYD+FS+ + YLADG+Y+PDI +G+L+     SF  HQGGMEGLRQKGWT+FTVC 
Sbjct: 405 LYNVTYDIFSECYYYLADGTYVPDIHKGDLLVSEPFSFQNHQGGMEGLRQKGWTVFTVCA 464

Query: 168 LDMVCSKYNCTYKIMGMGDNQVLQVTVFTYSVDGAGEPTQKGKIEMATIINELF 7
           L++V S+Y+CTY+IMGMGDNQVLQ+T++T  ++  G  +++G  EM   +  +F
Sbjct: 465 LEVVLSQYDCTYRIMGMGDNQVLQITLYTGKLNEDGSASEEGLDEMKETMRRIF 518


>gb|AIG59921.1| L protein, partial [Strawberry crinkle virus]
          Length = 632

 Score =  222 bits (566), Expect = 4e-66
 Identities = 99/174 (56%), Positives = 129/174 (74%)
 Frame = -2

Query: 528 KTYSIAKRQSRTMRTIGQDKLWVSRTVCLSLDFEKWNGHMRKESTAPIFTCLGDLFGMEN 349
           K YS  + QS   +  G D+ W S+ +C+SLDFEKWNGHMRKE T  +FT +GDLFGM  
Sbjct: 327 KMYSTVRHQSVLNKKRGSDRTWASKVICMSLDFEKWNGHMRKEMTLGVFTPIGDLFGMTE 386

Query: 348 LYNVTYDLFSQSFLYLADGSYIPDIKRGELVEEGSLSFSGHQGGMEGLRQKGWTIFTVCC 169
           LYNVTYD+FS+ + YLADG+Y+PDI +G+L+     SF  HQGGMEGLRQKGWTIFTVC 
Sbjct: 387 LYNVTYDIFSECYYYLADGTYVPDIHKGDLLVSEPFSFQNHQGGMEGLRQKGWTIFTVCA 446

Query: 168 LDMVCSKYNCTYKIMGMGDNQVLQVTVFTYSVDGAGEPTQKGKIEMATIINELF 7
           L++V S+Y+CTY+IMGMGDNQVLQ+T++T  ++  G  + +G  EM   +  +F
Sbjct: 447 LEVVLSQYDCTYRIMGMGDNQVLQITLYTGKLNDDGSASDEGLSEMKETMRRIF 500


>gb|AAQ97580.1| L protein, partial [Strawberry crinkle virus]
          Length = 546

 Score =  219 bits (558), Expect = 1e-65
 Identities = 97/174 (55%), Positives = 130/174 (74%)
 Frame = -2

Query: 528 KTYSIAKRQSRTMRTIGQDKLWVSRTVCLSLDFEKWNGHMRKESTAPIFTCLGDLFGMEN 349
           K YS  + QS   +  G D+ W S+ +C+SLDFEKWNGHMRKE T  +FT +GDLFGM  
Sbjct: 345 KMYSTVRHQSVLNKKRGSDRTWASKVICMSLDFEKWNGHMRKEMTLGVFTPIGDLFGMTE 404

Query: 348 LYNVTYDLFSQSFLYLADGSYIPDIKRGELVEEGSLSFSGHQGGMEGLRQKGWTIFTVCC 169
           LYNVTYD+FS+ + YLADG+Y+PDI +G+L+     SF  +QGGMEGLRQKGWT+FTVC 
Sbjct: 405 LYNVTYDIFSECYYYLADGTYVPDIHKGDLLVSEPFSFQNNQGGMEGLRQKGWTVFTVCA 464

Query: 168 LDMVCSKYNCTYKIMGMGDNQVLQVTVFTYSVDGAGEPTQKGKIEMATIINELF 7
           L++V S+Y+CTY+IMGMGDNQVLQ+T++T  ++  G  +++G  EM   +  +F
Sbjct: 465 LEVVLSQYDCTYRIMGMGDNQVLQITLYTGKLNEDGSASEEGLDEMKETMRRIF 518


>gb|AAP03645.2| putative RNA-dependent RNA polymerase, partial [Strawberry crinkle
           virus]
          Length = 764

 Score =  222 bits (566), Expect = 3e-65
 Identities = 99/174 (56%), Positives = 129/174 (74%)
 Frame = -2

Query: 528 KTYSIAKRQSRTMRTIGQDKLWVSRTVCLSLDFEKWNGHMRKESTAPIFTCLGDLFGMEN 349
           K YS  + QS   +  G D+ W S+ +C+SLDFEKWNGHMRKE T  +FT +GDLFGM  
Sbjct: 334 KMYSTVRHQSVLNKKRGSDRTWASKVICMSLDFEKWNGHMRKEMTLGVFTPIGDLFGMTE 393

Query: 348 LYNVTYDLFSQSFLYLADGSYIPDIKRGELVEEGSLSFSGHQGGMEGLRQKGWTIFTVCC 169
           LYNVTYD+FS+ + YLADG+Y+PDI +G+L+     SF  HQGGMEGLRQKGWTIFTVC 
Sbjct: 394 LYNVTYDIFSECYYYLADGTYVPDIHKGDLLVSEPFSFQNHQGGMEGLRQKGWTIFTVCA 453

Query: 168 LDMVCSKYNCTYKIMGMGDNQVLQVTVFTYSVDGAGEPTQKGKIEMATIINELF 7
           L++V S+Y+CTY+IMGMGDNQVLQ+T++T  ++  G  + +G  EM   +  +F
Sbjct: 454 LEVVLSQYDCTYRIMGMGDNQVLQITLYTGKLNDDGSASDEGLSEMKETMRRIF 507


>ref|YP_009301361.1| RNA-dependent RNA polymerase [Wuhan Insect virus 6]
 gb|AJG39191.1| RNA-dependent RNA polymerase [Wuhan Insect virus 6]
          Length = 2079

 Score =  226 bits (575), Expect = 3e-65
 Identities = 104/177 (58%), Positives = 128/177 (72%), Gaps = 1/177 (0%)
 Frame = -2

Query: 528  KTYSIAKRQSRTMRTIGQDKLWVSRTVCLSLDFEKWNGHMRKESTAPIFTCLGDLFGMEN 349
            K Y   K+QS   R  G    W SR VC+SLDFEKWNGHMRK  T P+FT LGDLFG+  
Sbjct: 542  KMYVTVKQQSNVGRKTGVKHRWASRVVCMSLDFEKWNGHMRKTMTKPVFTSLGDLFGLSE 601

Query: 348  LYNVTYDLFSQSFLYLADGSYIPDI-KRGELVEEGSLSFSGHQGGMEGLRQKGWTIFTVC 172
            LYN+TYD+F  S+ YLADG+YIP +   G L      SF+GH+GGMEGLRQKGWT++TVC
Sbjct: 602  LYNMTYDIFEGSYYYLADGTYIPKVDSSGNLEVTEPYSFTGHKGGMEGLRQKGWTLYTVC 661

Query: 171  CLDMVCSKYNCTYKIMGMGDNQVLQVTVFTYSVDGAGEPTQKGKIEMATIINELFSD 1
            CL+++ SKYNCTYKIMGMGDNQVLQ+T++T  +D  G PT +G  +M T +  +F D
Sbjct: 662  CLEVILSKYNCTYKIMGMGDNQVLQITLYTNKIDLRGSPTVEGLSDMKTTLGLIFDD 718


>ref|YP_009177021.1| polymerase protein [Alfalfa dwarf virus]
 gb|AKD44217.1| polymerase protein [Alfalfa dwarf virus]
          Length = 2085

 Score =  223 bits (569), Expect = 2e-64
 Identities = 100/174 (57%), Positives = 132/174 (75%)
 Frame = -2

Query: 528  KTYSIAKRQSRTMRTIGQDKLWVSRTVCLSLDFEKWNGHMRKESTAPIFTCLGDLFGMEN 349
            K +S  K QS   +  G+DK W S+ +C+SLDFEKWNGHMRK  T+ +FT LGDLFGM  
Sbjct: 539  KMFSTVKHQSVQNKKRGKDKTWASKVICMSLDFEKWNGHMRKSMTSGVFTALGDLFGMSE 598

Query: 348  LYNVTYDLFSQSFLYLADGSYIPDIKRGELVEEGSLSFSGHQGGMEGLRQKGWTIFTVCC 169
            LYN TYD+F + + YLADG+Y+P I+  +L  E   SF+GH+GGMEGLRQKGWT+FTVC 
Sbjct: 599  LYNQTYDIFGECYYYLADGTYVPGIEGDKLKVENPSSFTGHKGGMEGLRQKGWTLFTVCG 658

Query: 168  LDMVCSKYNCTYKIMGMGDNQVLQVTVFTYSVDGAGEPTQKGKIEMATIINELF 7
            L+++ S+++CTYKIMGMGDNQVLQ+T++T  VD AG PT +G  E+   +N++F
Sbjct: 659  LEVILSQHDCTYKIMGMGDNQVLQITLYTNKVDNAGLPTDEGLREIKLSMNDIF 712


>ref|YP_002308376.1| L protein [Lettuce yellow mottle virus]
 gb|ABV56129.1| L protein [Lettuce yellow mottle virus]
          Length = 2068

 Score =  222 bits (566), Expect = 5e-64
 Identities = 107/177 (60%), Positives = 132/177 (74%), Gaps = 1/177 (0%)
 Frame = -2

Query: 528  KTYSIAKRQSRTMRTIGQDKLWVSRTVCLSLDFEKWNGHMRKESTAPIFTCLGDLFGMEN 349
            K YS  K QS   + IG   ++ S+TVC+SLDFEKWNGHMRKEST  +F  LG+LFGM +
Sbjct: 542  KMYSTVKNQSVRKKQIGA--IFDSKTVCMSLDFEKWNGHMRKESTYHVFKALGELFGMTD 599

Query: 348  LYNVTYDLFSQSFLYLADGSYIPDIKR-GELVEEGSLSFSGHQGGMEGLRQKGWTIFTVC 172
            LYN+TYD+F  S+ YLADGSY+P I   G+ V E   SF+GH+GG EGLRQKGWTIFTV 
Sbjct: 600  LYNMTYDIFKDSYFYLADGSYLPKINESGDFVPEPPFSFTGHKGGQEGLRQKGWTIFTVV 659

Query: 171  CLDMVCSKYNCTYKIMGMGDNQVLQVTVFTYSVDGAGEPTQKGKIEMATIINELFSD 1
             LD +C K+NCTYK MGMGDNQVLQ+T++TY VD +G+ T+ G  EM T++  LF D
Sbjct: 660  GLDWICRKHNCTYKSMGMGDNQVLQITMYTYQVDSSGKATKMGLEEMKTVLFGLFDD 716


>ref|YP_009352236.1| L protein [Tomato yellow mottle-associated virus]
 gb|AQY17505.1| L protein [Tomato yellow mottle-associated virus]
          Length = 2085

 Score =  221 bits (562), Expect = 2e-63
 Identities = 100/177 (56%), Positives = 136/177 (76%), Gaps = 1/177 (0%)
 Frame = -2

Query: 528  KTYSIAKRQSRTMRTIGQDKLWVSRTVCLSLDFEKWNGHMRKESTAPIFTCLGDLFGMEN 349
            K Y+  + QS   +   ++K W S+TVC+SLDFEKWNGHMRK  T+ +FT +GDLFG+  
Sbjct: 542  KMYNTVRNQSSLKKRHNKEKGWASKTVCISLDFEKWNGHMRKSMTSGVFTAIGDLFGLSE 601

Query: 348  LYNVTYDLFSQSFLYLADGSYIPDI-KRGELVEEGSLSFSGHQGGMEGLRQKGWTIFTVC 172
            L+NVTYDLFS+S+ YLADGSY+P I   G LV +   SF  HQGGMEGLRQKGWT++TVC
Sbjct: 602  LFNVTYDLFSESYYYLADGSYVPSIDDDGNLVVDEPKSFINHQGGMEGLRQKGWTLYTVC 661

Query: 171  CLDMVCSKYNCTYKIMGMGDNQVLQVTVFTYSVDGAGEPTQKGKIEMATIINELFSD 1
             L+++ SKY+C Y+IMGMGDNQVLQ+TV++  VD +G+ T +G ++M+ I++++F D
Sbjct: 662  GLEVILSKYDCEYRIMGMGDNQVLQITVYSNIVDESGKATAEGLLQMSGILDDIFKD 718


>gb|ATS17313.1| RNA-dependent RNA polymerase [Cabbage cytorhabdovirus 1]
          Length = 2071

 Score =  213 bits (541), Expect = 1e-60
 Identities = 99/177 (55%), Positives = 132/177 (74%), Gaps = 1/177 (0%)
 Frame = -2

Query: 528  KTYSIAKRQSRTMRTIGQDKLWVSRTVCLSLDFEKWNGHMRKESTAPIFTCLGDLFGMEN 349
            KTY+  + QS       + +L  S+TVC+SLDFEKWNGHMR+E+T  +F  LG+LFG+++
Sbjct: 543  KTYTTVRNQSANK---AKSRLMASKTVCMSLDFEKWNGHMRQEATLHVFKSLGELFGLDD 599

Query: 348  LYNVTYDLFSQSFLYLADGSYIPDIK-RGELVEEGSLSFSGHQGGMEGLRQKGWTIFTVC 172
            LY+VTYD+F +S+ YLADGSY+P     G+   E  LSF+GH+GG EGLRQKGWTIFTV 
Sbjct: 600  LYHVTYDIFKESYFYLADGSYVPVFNANGDFAPEPPLSFTGHKGGQEGLRQKGWTIFTVV 659

Query: 171  CLDMVCSKYNCTYKIMGMGDNQVLQVTVFTYSVDGAGEPTQKGKIEMATIINELFSD 1
             LD +CS++NC+YKIMGMGDNQVLQ+T++T  VD  G PT++G  +M   +  +FSD
Sbjct: 660  GLDKICSEHNCSYKIMGMGDNQVLQLTMYTNKVDIQGAPTEQGMKDMQRTLKNVFSD 716


>gb|ADA68872.1| L protein, partial [Ivy vein banding virus]
          Length = 365

 Score =  200 bits (509), Expect = 3e-60
 Identities = 97/143 (67%), Positives = 114/143 (79%)
 Frame = -2

Query: 528 KTYSIAKRQSRTMRTIGQDKLWVSRTVCLSLDFEKWNGHMRKESTAPIFTCLGDLFGMEN 349
           K Y+  + QS  ++  G  K    +TVC+SLDFEKWNGHMR EST  +F  LG+LFGM++
Sbjct: 225 KMYTNVRSQSSGLK--GSRKTADQKTVCMSLDFEKWNGHMRYESTFFVFQALGELFGMDS 282

Query: 348 LYNVTYDLFSQSFLYLADGSYIPDIKRGELVEEGSLSFSGHQGGMEGLRQKGWTIFTVCC 169
           LYN TY++FS+SF+YLADGSYIP IK G L E+   SFS H+GGMEGLRQKGWTIFTVC 
Sbjct: 283 LYNRTYEIFSESFIYLADGSYIPVIKDGSLQEDEPRSFSDHKGGMEGLRQKGWTIFTVCV 342

Query: 168 LDMVCSKYNCTYKIMGMGDNQVL 100
           L+MVCSKYNCTYKIMGMGDNQVL
Sbjct: 343 LNMVCSKYNCTYKIMGMGDNQVL 365


>emb|CBL76312.2| RNA-dependent RNA polymerase, partial [Raspberry vein chlorosis
           virus]
          Length = 1010

 Score =  210 bits (535), Expect = 6e-60
 Identities = 100/179 (55%), Positives = 129/179 (72%), Gaps = 3/179 (1%)
 Frame = -2

Query: 528 KTYSIAKRQSRTMRTIGQDKLWVSRTVCLSLDFEKWNGHMRKESTAPIFTCLGDLFGMEN 349
           K YS  K QS   R  G+D LW SR +C+SLDFEKWNGHMRKE T+ +FT LGDLFG+  
Sbjct: 309 KMYSTVKHQSIQNRQRGKDNLWASRVICMSLDFEKWNGHMRKEMTSGVFTALGDLFGLTE 368

Query: 348 LYNVTYDLFSQSFLYLADGSYIPDIKR---GELVEEGSLSFSGHQGGMEGLRQKGWTIFT 178
           +YNVTYD+F + + YLADGSY+P       G  + E   S + HQGGMEGLRQKGWT+FT
Sbjct: 369 IYNVTYDIFKECYYYLADGSYVPSCTTDNIGLSINEPQSSIN-HQGGMEGLRQKGWTLFT 427

Query: 177 VCCLDMVCSKYNCTYKIMGMGDNQVLQVTVFTYSVDGAGEPTQKGKIEMATIINELFSD 1
           VC L++V S+++C+YKIMGMGDNQVLQ+T++T  V   G P+++G  EM   +  +FS+
Sbjct: 428 VCALEVVLSRHDCSYKIMGMGDNQVLQITLYTNKVSEGGLPSEEGLSEMRKNMALIFSE 486


>gb|ADA68871.1| L protein, partial [Ivy vein banding virus]
          Length = 365

 Score =  198 bits (503), Expect = 2e-59
 Identities = 96/143 (67%), Positives = 114/143 (79%)
 Frame = -2

Query: 528 KTYSIAKRQSRTMRTIGQDKLWVSRTVCLSLDFEKWNGHMRKESTAPIFTCLGDLFGMEN 349
           K Y+  + QS  ++  G  ++   +TVC+SLDFEKWNGHMR EST  +F  LG+LFGME+
Sbjct: 225 KMYTNVRPQSAGIK--GSRRVTDQKTVCMSLDFEKWNGHMRYESTFFVFQALGELFGMES 282

Query: 348 LYNVTYDLFSQSFLYLADGSYIPDIKRGELVEEGSLSFSGHQGGMEGLRQKGWTIFTVCC 169
           LYN TY++FS+SF+YLADGSYIP IK G L  +   SFS H+GGMEGLRQKGWTIFTVC 
Sbjct: 283 LYNRTYEIFSESFIYLADGSYIPIIKDGSLQMDEPRSFSDHKGGMEGLRQKGWTIFTVCV 342

Query: 168 LDMVCSKYNCTYKIMGMGDNQVL 100
           L+MVCSKYNCTYKIMGMGDNQVL
Sbjct: 343 LNMVCSKYNCTYKIMGMGDNQVL 365