BLASTX nr result
ID: Ophiopogon24_contig00036119
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00036119
(578 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ONK67179.1| uncharacterized protein A4U43_C06F16950, partial ... 62 7e-08
ref|XP_020269981.1| DNA mismatch repair protein MSH6 isoform X4 ... 62 7e-08
ref|XP_020269980.1| DNA mismatch repair protein MSH6 isoform X3 ... 62 7e-08
ref|XP_020269979.1| DNA mismatch repair protein MSH6 isoform X2 ... 62 7e-08
ref|XP_020269977.1| DNA mismatch repair protein MSH6 isoform X1 ... 62 7e-08
ref|XP_020276974.1| DNA mismatch repair protein MSH6-like isofor... 62 1e-07
ref|XP_020276973.1| DNA mismatch repair protein MSH6-like isofor... 62 1e-07
ref|XP_020276972.1| DNA mismatch repair protein MSH6-like isofor... 62 1e-07
ref|XP_010932609.2| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch... 59 8e-07
ref|XP_008800758.1| PREDICTED: DNA mismatch repair protein MSH6 ... 59 8e-07
gb|OAY70755.1| DNA mismatch repair protein MSH6, partial [Ananas... 56 9e-06
ref|XP_009401272.1| PREDICTED: DNA mismatch repair protein MSH6 ... 56 9e-06
>gb|ONK67179.1| uncharacterized protein A4U43_C06F16950, partial [Asparagus
officinalis]
Length = 976
Score = 62.4 bits (150), Expect = 7e-08
Identities = 32/42 (76%), Positives = 34/42 (80%)
Frame = +3
Query: 453 HCLCLILSK*QHVEIIKPSLLLSLETEKVLKNHTRNPLIKNL 578
HCLC ILS+ + VEIIKPS LLS ETE VLK HTRNPLI NL
Sbjct: 511 HCLCSILSELRPVEIIKPSELLSPETENVLKYHTRNPLINNL 552
>ref|XP_020269981.1| DNA mismatch repair protein MSH6 isoform X4 [Asparagus officinalis]
Length = 1309
Score = 62.4 bits (150), Expect = 7e-08
Identities = 32/42 (76%), Positives = 34/42 (80%)
Frame = +3
Query: 453 HCLCLILSK*QHVEIIKPSLLLSLETEKVLKNHTRNPLIKNL 578
HCLC ILS+ + VEIIKPS LLS ETE VLK HTRNPLI NL
Sbjct: 508 HCLCSILSELRPVEIIKPSELLSPETENVLKYHTRNPLINNL 549
>ref|XP_020269980.1| DNA mismatch repair protein MSH6 isoform X3 [Asparagus officinalis]
Length = 1311
Score = 62.4 bits (150), Expect = 7e-08
Identities = 32/42 (76%), Positives = 34/42 (80%)
Frame = +3
Query: 453 HCLCLILSK*QHVEIIKPSLLLSLETEKVLKNHTRNPLIKNL 578
HCLC ILS+ + VEIIKPS LLS ETE VLK HTRNPLI NL
Sbjct: 510 HCLCSILSELRPVEIIKPSELLSPETENVLKYHTRNPLINNL 551
>ref|XP_020269979.1| DNA mismatch repair protein MSH6 isoform X2 [Asparagus officinalis]
Length = 1312
Score = 62.4 bits (150), Expect = 7e-08
Identities = 32/42 (76%), Positives = 34/42 (80%)
Frame = +3
Query: 453 HCLCLILSK*QHVEIIKPSLLLSLETEKVLKNHTRNPLIKNL 578
HCLC ILS+ + VEIIKPS LLS ETE VLK HTRNPLI NL
Sbjct: 511 HCLCSILSELRPVEIIKPSELLSPETENVLKYHTRNPLINNL 552
>ref|XP_020269977.1| DNA mismatch repair protein MSH6 isoform X1 [Asparagus officinalis]
Length = 1314
Score = 62.4 bits (150), Expect = 7e-08
Identities = 32/42 (76%), Positives = 34/42 (80%)
Frame = +3
Query: 453 HCLCLILSK*QHVEIIKPSLLLSLETEKVLKNHTRNPLIKNL 578
HCLC ILS+ + VEIIKPS LLS ETE VLK HTRNPLI NL
Sbjct: 513 HCLCSILSELRPVEIIKPSELLSPETENVLKYHTRNPLINNL 554
>ref|XP_020276974.1| DNA mismatch repair protein MSH6-like isoform X3 [Asparagus
officinalis]
Length = 943
Score = 61.6 bits (148), Expect = 1e-07
Identities = 31/42 (73%), Positives = 34/42 (80%)
Frame = +3
Query: 453 HCLCLILSK*QHVEIIKPSLLLSLETEKVLKNHTRNPLIKNL 578
HCLC ILS+ + VEIIKPS LSLETE VLK HTR+PLI NL
Sbjct: 158 HCLCSILSELRPVEIIKPSKFLSLETEMVLKYHTRDPLINNL 199
>ref|XP_020276973.1| DNA mismatch repair protein MSH6-like isoform X2 [Asparagus
officinalis]
Length = 1219
Score = 61.6 bits (148), Expect = 1e-07
Identities = 31/42 (73%), Positives = 34/42 (80%)
Frame = +3
Query: 453 HCLCLILSK*QHVEIIKPSLLLSLETEKVLKNHTRNPLIKNL 578
HCLC ILS+ + VEIIKPS LSLETE VLK HTR+PLI NL
Sbjct: 443 HCLCSILSELRPVEIIKPSKFLSLETEMVLKYHTRDPLINNL 484
>ref|XP_020276972.1| DNA mismatch repair protein MSH6-like isoform X1 [Asparagus
officinalis]
gb|ONK60807.1| uncharacterized protein A4U43_C08F22830 [Asparagus officinalis]
Length = 1228
Score = 61.6 bits (148), Expect = 1e-07
Identities = 31/42 (73%), Positives = 34/42 (80%)
Frame = +3
Query: 453 HCLCLILSK*QHVEIIKPSLLLSLETEKVLKNHTRNPLIKNL 578
HCLC ILS+ + VEIIKPS LSLETE VLK HTR+PLI NL
Sbjct: 443 HCLCSILSELRPVEIIKPSKFLSLETEMVLKYHTRDPLINNL 484
>ref|XP_010932609.2| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein MSH6
[Elaeis guineensis]
Length = 1288
Score = 59.3 bits (142), Expect = 8e-07
Identities = 28/42 (66%), Positives = 36/42 (85%)
Frame = +3
Query: 453 HCLCLILSK*QHVEIIKPSLLLSLETEKVLKNHTRNPLIKNL 578
HCLC ILS+ + VEIIKPS +LS ETE+VL+N+TRNPL+ +L
Sbjct: 506 HCLCSILSELRPVEIIKPSKVLSPETERVLRNNTRNPLVNDL 547
>ref|XP_008800758.1| PREDICTED: DNA mismatch repair protein MSH6 [Phoenix dactylifera]
Length = 1292
Score = 59.3 bits (142), Expect = 8e-07
Identities = 28/42 (66%), Positives = 36/42 (85%)
Frame = +3
Query: 453 HCLCLILSK*QHVEIIKPSLLLSLETEKVLKNHTRNPLIKNL 578
HCLC ILS+ + VEIIKPS +LS ETE+VL+N+TRNPL+ +L
Sbjct: 502 HCLCSILSELRPVEIIKPSKVLSPETERVLRNNTRNPLVNDL 543
>gb|OAY70755.1| DNA mismatch repair protein MSH6, partial [Ananas comosus]
Length = 1101
Score = 56.2 bits (134), Expect = 9e-06
Identities = 28/42 (66%), Positives = 34/42 (80%)
Frame = +3
Query: 453 HCLCLILSK*QHVEIIKPSLLLSLETEKVLKNHTRNPLIKNL 578
H LC ILS+ + VE+IKPS LLS ETE+VLKN+TRNPL +L
Sbjct: 448 HSLCSILSELRPVEVIKPSKLLSPETERVLKNNTRNPLFNDL 489
>ref|XP_009401272.1| PREDICTED: DNA mismatch repair protein MSH6 [Musa acuminata subsp.
malaccensis]
Length = 1279
Score = 56.2 bits (134), Expect = 9e-06
Identities = 27/42 (64%), Positives = 34/42 (80%)
Frame = +3
Query: 453 HCLCLILSK*QHVEIIKPSLLLSLETEKVLKNHTRNPLIKNL 578
H LC ILS+ + VE+IKPS LS ETE+V+KN+TRNPL+ NL
Sbjct: 493 HWLCSILSELRPVEVIKPSKALSPETERVIKNNTRNPLVNNL 534