BLASTX nr result

ID: Ophiopogon24_contig00035917 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00035917
         (409 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_024264456.1| proline-rich protein 36-like, partial [Oncor...    64   6e-09
ref|WP_080674151.1| hypothetical protein [Mycobacterium kansasii]      55   1e-06
ref|XP_021812874.1| probable polygalacturonase At3g15720 [Prunus...    56   2e-06
ref|WP_106432111.1| hypothetical protein [Streptomyces sp. Tu6071]     54   3e-06
gb|AAW51128.1| minus agglutinin [Chlamydomonas incerta]                55   4e-06
ref|XP_008675925.1| extensin-like [Zea mays]                           54   6e-06

>ref|XP_024264456.1| proline-rich protein 36-like, partial [Oncorhynchus tshawytscha]
          Length = 1604

 Score = 63.5 bits (153), Expect = 6e-09
 Identities = 44/127 (34%), Positives = 54/127 (42%), Gaps = 4/127 (3%)
 Frame = -1

Query: 397  PGVPRIRPPSPCSPQ----ACPVFSRSIHANPSTSPPCPRIAAQRTISHTRNHTATQPQR 230
            PG PR+ PP P  P+      P  +R  HA+ + +P  P  A +R     R   AT P R
Sbjct: 1048 PGAPRVAPPYPLRPRPNARGSPARARGAHASSAAAPEPPHAARRR-----RPRPATAPSR 1102

Query: 229  HPGWSRSMPNPPLPAEPPCRRLLSKPDPRIPTPHTPLYRARLHRLNPTPRPLRPCFNRTP 50
             P      P PP PA P        P PR P P  P   AR      TPRP+ P     P
Sbjct: 1103 PP----PPPRPPPPAPPMSPATPGPPPPRAPPPRPPPAAAR------TPRPVAPRPRGPP 1152

Query: 49   QPIRFST 29
             P+  S+
Sbjct: 1153 APLLASS 1159


>ref|WP_080674151.1| hypothetical protein [Mycobacterium kansasii]
          Length = 139

 Score = 54.7 bits (130), Expect = 1e-06
 Identities = 41/103 (39%), Positives = 44/103 (42%)
 Frame = -1

Query: 376 PPSPCSPQACPVFSRSIHANPSTSPPCPRIAAQRTISHTRNHTATQPQRHPGWSRSMPNP 197
           PPSP  P A P        N   SPP P       ++     T   P   PG   S PNP
Sbjct: 27  PPSPAPPPAPPAPPAPPAPNSPPSPPPPPAPPALPVAPALPPTPPAP---PGPYNSPPNP 83

Query: 196 PLPAEPPCRRLLSKPDPRIPTPHTPLYRARLHRLNPTPRPLRP 68
           PLP  PP  R L+ P P  P P  PL RA    L P P PL P
Sbjct: 84  PLPPAPPVLRALAPPAP--PAPPAPLRRA----LPPAP-PLPP 119


>ref|XP_021812874.1| probable polygalacturonase At3g15720 [Prunus avium]
          Length = 721

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 40/115 (34%), Positives = 51/115 (44%), Gaps = 10/115 (8%)
 Frame = -1

Query: 391 VPRIRPPSPCSPQACPVFSRSIHANPSTSPPCPRIAAQ-----RTISHTRNHTATQPQRH 227
           +P   PP P +P  CP+    + A P  SPP P    Q      T   +    AT P   
Sbjct: 557 LPDTPPPLPATPPPCPL----LPATPPQSPPLPATPPQFPPLPATPPQSPPLPATPPSSP 612

Query: 226 PGWSRSMPNPPLPAEPPCRR-----LLSKPDPRIPTPHTPLYRARLHRLNPTPRP 77
           P  +    +PPLPA PP  +     LL++P P +P P TP     L  L PTP P
Sbjct: 613 PMPATPPSSPPLPATPPPLQVMPPPLLNRPRPTLPLPTTPPPAPLLTPLVPTPPP 667


>ref|WP_106432111.1| hypothetical protein [Streptomyces sp. Tu6071]
          Length = 177

 Score = 54.3 bits (129), Expect = 3e-06
 Identities = 39/112 (34%), Positives = 46/112 (41%), Gaps = 5/112 (4%)
 Frame = -1

Query: 397 PGVPRIRPPSPCSPQACPVFSRSIHANPSTSPPCPRIAAQRTISHTRNHTATQPQRHPGW 218
           P VP   PP P SP A P         P   P  PR  + R   H R  T+ +P+     
Sbjct: 47  PPVPIALPPPPPSPPASPA--------PPGRPLAPR-PSSRAAGHLRPRTSRRPRTPRSS 97

Query: 217 SRSM-----PNPPLPAEPPCRRLLSKPDPRIPTPHTPLYRARLHRLNPTPRP 77
           SR +     P   +P  PP  RL S+P PR      P  R   HR  P PRP
Sbjct: 98  SRPIHPAPRPRSLVPPSPPLHRLPSRPRPRCCCRRPPRSRPPRHRPPPAPRP 149


>gb|AAW51128.1| minus agglutinin [Chlamydomonas incerta]
          Length = 4027

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 39/118 (33%), Positives = 45/118 (38%)
 Frame = -1

Query: 397  PGVPRIRPPSPCSPQACPVFSRSIHANPSTSPPCPRIAAQRTISHTRNHTATQPQRHPGW 218
            P  PR  PPSP  P   P         PS  PP P   +    S      +  P   P  
Sbjct: 751  PAPPRPNPPSPGPPNLNP---------PSPEPPSPLPPSPAPPSPAPQPPSPSPPLPPSP 801

Query: 217  SRSMPNPPLPAEPPCRRLLSKPDPRIPTPHTPLYRARLHRLNPTPRPLRPCFNRTPQP 44
            + S P PP PA P        PDP  PTP +P   + +  L P P P  P   R P P
Sbjct: 802  APSSPEPPSPAPP-------SPDPPSPTPPSPQPPSPIPHLPPPPEPPSPEPPRPPSP 852


>ref|XP_008675925.1| extensin-like [Zea mays]
          Length = 250

 Score = 54.3 bits (129), Expect = 6e-06
 Identities = 42/122 (34%), Positives = 54/122 (44%), Gaps = 19/122 (15%)
 Frame = -1

Query: 385 RIRPPSPCSPQACPVFSRSIHANPSTSP-------------PCPR-IAAQRTISHTRNHT 248
           R   PSP +P A  + SR  HA PST P             PCP  +AA   ++  +  +
Sbjct: 91  RSAAPSPSTPLA--IRSRGRHAPPSTRPAAARAPLPAALDAPCPATLAAPAPLATPKRPS 148

Query: 247 ATQPQRHPGWSRSMPNPPLPAEPPCRRLLSKPDPRIPTPH-----TPLYRARLHRLNPTP 83
           +  P R P      P PP  A  P RR +S P P   +P+     TPL R   H   P+P
Sbjct: 149 SCPPPRPPAHCLPHPLPPTVAPSPARRRVSTPPPNATSPNAAAAPTPLCRCP-HLPTPSP 207

Query: 82  RP 77
           RP
Sbjct: 208 RP 209


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